ID AB005455; SV 1; linear; genomic DNA; GSS; PLN; 3607 BP. XX AC AB005455; XX DT 26-JUL-1997 (Rel. 52, Created) DT 27-DEC-2005 (Rel. 86, Last updated, Version 2) XX DE Antirrhinum majus DNA. XX KW genome survey sequence; GSS. XX OS Antirrhinum majus (snapdragon) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC asterids; lamiids; Lamiales; Plantaginaceae; Antirrhineae; Antirrhinum. XX RN [1] RP 1-3607 RA Kishima Y.; RT ; RL Submitted (30-JUN-1997) to the INSDC. RL Yuji Kishima, Faculty of Agriculture, Hokkaido University, Genetic RL Engineering Laboratory; North 9 West 9 Kita-Ku, Sapporo, Hokkaido 060, RL Japan (E-mail:gelab@abs.agr.hokudai.ac.jp, Tel:81-11-706-2484, RL Fax:81-11-716-0879) XX RN [2] RA Kishima Y., Yamashita S., Mikami T.; RT "Immobilized copies with nearly intact structure of the transposon Tam3 in RT Antirrhinum majus: implications for cis-element related to the RT transposition."; RL Unpublished. XX DR MD5; 99bd259f27d25826e7d346caf4bcbd26. XX FH Key Location/Qualifiers FH FT source 1..3607 FT /organism="Antirrhinum majus" FT /mol_type="genomic DNA" FT /clone="S-40" FT /db_xref="taxon:4151" XX SQ Sequence 3607 BP; 1117 A; 670 C; 698 G; 1122 T; 0 other; taaagatgtg aactgggccg tgccaattcg gcccggcacg gcccagctcg tgaaaaagca 60 cggcccggca cgcctatttt gcgtgtcggg ccatgcgggc cattatattg cgtgcctggg 120 ccgattcggc ccaggcacgc atttggcccg cgaaataagg ggacccgcgg gcccctttta 180 aaaaaaaaat tattttttat tttaggccta gccataaggc tgggcctaaa agaagctgac 240 ccacaaaaaa tgtgggtcag ctgttaaaag cgtggctttg tagccacgct tttaactaaa 300 tgagtagtag ccgttgccaa tggcaacggc tactataaat ttgaacttaa cggtccaatt 360 tcagattgga ccgtctaatc tgaaattgga ccgttctgat tgctgccaaa ttcaggcagc 420 aatcaggcgc caattttttt attttttttt tttttttttt ctgaactttt gaaaactata 480 aataccaccc catctcttct attttttccc actttcaagt ttcaactatc caattctaat 540 ctacttctag ccaaattcta cttatttgct ctctaaaatt cctcacattt ttatttctta 600 gtgttttatt taaagttcta gtattttttt tcattgtcac tttgtgtttc cacacaatac 660 cttcataaca tttttcaatt atggcaaacg aaggaactca aatcatcgtg gccaatccgt 720 cccacctcat ctcgatatta atgaaatacc gccactatac gaatttccgg taggggagtt 780 ccaagtaccg acccgtacgt gcgatatcgt gcagatacac catatgaaga ttcacaattt 840 atggacacga gcaatattca acccgccgct acagaagagt atatacaaaa tttaaatatg 900 ggtgttggct tttcggtgtg ggatacggga ttaggaatcg ggccacatgt tggtaattat 960 caacaagaac atgttttcgg gcccggtgtc ggcccttcaa ataacaatcc ggcagtggaa 1020 cttggaccac atgtaggcac ttcccactac gacacgtcag cgaacatggc gggagaaacc 1080 gcgatcggtg gtgcttcatc ggcggtgggc tcggacgatg acgcagcgga aggggataat 1140 gcagaaatgg atgaggacga aattccagat actccagtcg agcaaatggc ctctacatca 1200 ataactcaga aaaaaatgaa gaaagcgatt gtatggaaat ggttttcaaa ggtgaccggt 1260 tctgactggg ctcagtgttt actttgtcct acaagatatt ctcacaaaac gggatgcggg 1320 acgggaacac ttacaagaca tttgacggca aagcataaga atcgcgacat ggacgctccg 1380 gatatgcaac gacaaccaga cggtacaatg gcaccgtgga ggtatgacca aaattacatg 1440 cgtatttgtt tagctcaatt ttatagttca aaatgagttg ccctttagtt ttgcacaaaa 1500 tgaactattt gaaaacttta taaaaaaagt tgtgcaatgc aaatttaaga aaatttctag 1560 ggcaacttgt tttagagatg gtgttaagca atatgaaaag gatattatag ttttgagaaa 1620 tgaatttaaa aattttaatg gtagaatttc tttgacttct gattatggca aggtagtgga 1680 tcatatcatt ttagttgcat taccgcacat tggatagata aagattggat tatgcgtaaa 1740 agaataattg aatttgcaca gttagattcg cctcacaacg gggattgtat acgcgatgtc 1800 acaatgtcct ctttaaacta ttggggtata aaagacaaaa ttatgagcat ttccttagat 1860 aatgctagta acaatgttaa tgctataaag tcactcaaac cggcaatgaa tcttataatc 1920 gggggtcaat tatttcatgt taggtgcata tgtcatattt tgcatttatg tgttaaagat 1980 ggactgtcag tgttaatcca atcaattgat agaattagag tttgcttatc ccacattaat 2040 agatatcctc ctagagtaca acaatttaat actgtttgtg caacccatga catgcccatt 2100 aaacatattt atcttgacgt accacataga tggaatgcaa cttatagaat gttcattgag 2160 gccaaaccat attcagatcc aattactttc accgatcact tggcccaaat tctattttga 2220 ccgatgattg gaatatttgt gatatacttg ttccctattt agtgtatttt gaagaattta 2280 ctaaaattat gtcttcgtgt tatactccta catctaacat tatgttattg tatatggttt 2340 ctgtcgtgag attatttcat caacatagaa atcatgcaac tttaaaaaat atcataaaag 2400 aaatggaaaa aaaatgggta aagtattaca aaaaggtgcc taatgtttgt attttatcta 2460 gttgcttaga tccacgtgtt agattaatcg gaactttagt atactattag aaaaatatta 2520 ttcggcttta aacaatgtat ataatggtaa cgaagaacgt aacagaatat tacaattgct 2580 ttatagttta tatgacatgt atgctccatc cactgacatg aatgaatctc ctactaatgc 2640 ttctagaggt agtggtttta gtatttttga cgagttattg tcaaaccaac aatccaacca 2700 accaagtgta gggaattata ctgaaatcca cttatttgta caaaaaccac ctcaaaaatt 2760 tgacaaagat tttgatatac taaaatggtg gagatcaaaa tcgagtcacc aacccctgtc 2820 ttggctcgta ttgccagaga cttacttagt tcgcagatgt ctacggtagc atcggagcgt 2880 gcttttagtg caggtcatcg tgtgcttacg gatgcaagaa accgattaaa accaggcagt 2940 gtaaaatttt gcatgatttg gaaagacatg ctcgaccaac aatatagaga aaaaacttta 3000 aggaaggtta aaacggtctt ggcaatggat ggagaagagg ataatgaaga cgcaaccatg 3060 ccatatgatt tttacaaaca tccactaaat tgaacacttg caacctattt ttttaagatt 3120 taattttgaa gttcaccttt tatgtttttt ttttttagtt aatattttta tgcacccttt 3180 gttgtagttg ctaaaattta ccccttttta tttttaagtt caccttttat gtattttttg 3240 tagaacaaaa attttagttt acctctttgt atgaaagttt gctacttagt agttagttta 3300 attataattc atcaaatgtt aagttgtaac atttacttat tttcacaaaa attcaatgaa 3360 gaagtctttt ttttatgcat ggggtttttt tttccagcat tttttttatg ctaaaatatg 3420 taattttagt aaaaaaaaaa aaaaaaaaaa aaaaaagtgg gccgtgcctg ggccgaaccg 3480 gctggagaaa tggcccagca cggcacggcc cgggctcaaa aagcccagca cggcccggca 3540 cgcctaaaag gcgtgcctgg gcgaatacgt gccgagccgg cacggctcgg cacgtttccc 3600 atcttta 3607 // ID AB008800; SV 1; linear; genomic DNA; GSS; PLN; 678 BP. XX AC AB008800; XX DT 08-DEC-1997 (Rel. 53, Created) DT 15-JUN-2009 (Rel. 101, Last updated, Version 3) XX DE Arabidopsis thaliana DNA, clone: MUB10. XX KW genome survey sequence; GSS. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. XX RN [1] RP 1-678 RA Kotani H.; RT ; RL Submitted (11-NOV-1997) to the INSDC. RL Contact:Hirokazu Kotani Kazusa DNA Institute, Laboratory of DNA Sequencing; RL Yanauchino 1532-3, Kisaradu, Chiba 292, Japan XX RN [2] RA Kotani H.; RT "End Sequence of P1 clones of Arabidopsis thaliana Genome"; RL Unpublished. XX DR MD5; 2db87ce2f950152d3fdfe52ecc7c9096. XX FH Key Location/Qualifiers FH FT source 1..678 FT /organism="Arabidopsis thaliana" FT /chromosome="5" FT /map="0 cM" FT /ecotype="Columbia" FT /mol_type="genomic DNA" FT /clone_lib="P1" FT /clone="MUB10" FT /note="MUB10-Sp6 P1 Arabidopsis thaliana genomic clone FT MUB10" FT /db_xref="taxon:3702" XX SQ Sequence 678 BP; 196 A; 145 C; 180 G; 156 T; 1 other; gatcagttat atttaccttg gagttaggtc aaaagggaca ggataactag caaatgtagg 60 atgaggaatg gcagctaagt tacagctgat gctaatgtac acaggcttgc tctctctcag 120 agctgttgct atcgccttgt cgatctgttc atgagcatcc tctaaatggt tcaccacagc 180 ctgaaaacaa acacactgtc aaaatctaag aatgtgatga tcaagattcg ataatgtggt 240 tatacctgat agcaagtaac agtttggaaa cacctaagct cttggctaaa atcaggtaaa 300 ccaatggtgt gatgaagaat ccggttagtg ccaaaatcgt tggagttagg acctccaacg 360 atacatataa ctggtaggtt ctcactgtac gcaccagcga tagcgttcaa aacgctgagt 420 ccaccaacgg tgaaagtcac gacgcaagca ccgactccac gagatcgagc gtatccatcg 480 gcggcgtaac cggcgtttag ctcgttacag cacccgatgt tgttgagctc cgggttggcg 540 atgagctggt caagcagaga tangttgaaa tcaccgggaa cagtgaaaat gtcggtgact 600 ccggcttgga caagacggcg ggataagtga cgtccaagag tcctgcagag gagccgagta 660 tggttgcggc ggtgggaa 678 // ID AB030797; SV 1; linear; genomic DNA; GSS; PLN; 532 BP. XX AC AB030797; XX DT 14-DEC-1999 (Rel. 62, Created) DT 17-FEB-2004 (Rel. 78, Last updated, Version 5) XX DE Arabidopsis thaliana DNA, chromosome 1 between mi303 and mi259, left end of DE YAC clone CIC5D1, partial sequence. XX KW genome survey sequence; GSS. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. XX RN [1] RP 1-532 RA Kato A., Komeda Y.; RT ; RL Submitted (04-AUG-1999) to the INSDC. RL Atsushi Kato, Graduate School of Science, Hokkaido University, Division of RL Biological Sciences; Kita10, Nishi8, Kitaku, Sapporo 060-0810, Japan RL (E-mail:atsushi@sci.hokudai.ac.jp, Tel:81-11-706-2740, Fax:81-11-706-4851) XX RN [2] RX DOI; 10.1016/S0378-1119(99)00403-5. RX PUBMED; 10548732. RA Kato A., Suzuki M., Kuwahara A., Ooe H., Higano-Inaba K., Komeda Y.; RT "Isolation and analysis of cDNA within a 300 kb Arabidopsis thaliana RT genomic region located around the 100 map unit of chromosome 1"; RL Gene 239(2):309-316(1999). XX DR MD5; 6a6ab8311cc674f36ac91cb18a27464d. XX FH Key Location/Qualifiers FH FT source 1..532 FT /organism="Arabidopsis thaliana" FT /chromosome="chromosome 1" FT /map="between mi303 and mi259" FT /ecotype="Columbia" FT /mol_type="genomic DNA" FT /clone="YAC clone CIC5D1" FT /db_xref="taxon:3702" XX SQ Sequence 532 BP; 199 A; 82 C; 69 G; 182 T; 0 other; gaattcaatg attctatgca taatgcagtt atgctattgt ggggctacca attctcgtat 60 ttcacaggtt taataagaaa ataaagttgc attacttttt gccatttcgt gattaaaacc 120 catcaaagac aaagtgcttc acccgctcca caaaagtcat atagctagca aaataatttt 180 cttgaaaata tattcaaaca gattcattag aataaatact tagattaatt tgatctaaaa 240 tttgtctgtt atttgataat ggatcataat acaaaaaaaa atagaacata gtcttgtaat 300 tataatatta gtaaaaacta gatcatttag tatgaaagta cgtcaaaatt tcttattact 360 caaaaaatca caagatacta ctacggtatg tcatattaag taatgcttgt tcttcataaa 420 attaatgggc tgatacatta atataatgtt ggttaggtcc caatcaccca attaattatc 480 tgcttcccat taactgtgtg aaagccttaa tattatacaa ctaacatggc tt 532 // ID AB030798; SV 1; linear; genomic DNA; GSS; PLN; 741 BP. XX AC AB030798; XX DT 14-DEC-1999 (Rel. 62, Created) DT 17-FEB-2004 (Rel. 78, Last updated, Version 5) XX DE Arabidopsis thaliana DNA, chromosome 1 between mi303 and mi259, right end DE of YAC clone CIC5D1, partial sequence. XX KW genome survey sequence; GSS. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. XX RN [1] RP 1-741 RA Kato A., Komeda Y.; RT ; RL Submitted (04-AUG-1999) to the INSDC. RL Atsushi Kato, Graduate School of Science, Hokkaido University, Division of RL Biological Sciences; Kita10, Nishi8, Kitaku, Sapporo 060-0810, Japan RL (E-mail:atsushi@sci.hokudai.ac.jp, Tel:81-11-706-2740, Fax:81-11-706-4851) XX RN [2] RX DOI; 10.1016/S0378-1119(99)00403-5. RX PUBMED; 10548732. RA Kato A., Suzuki M., Kuwahara A., Ooe H., Higano-Inaba K., Komeda Y.; RT "Isolation and analysis of cDNA within a 300 kb Arabidopsis thaliana RT genomic region located around the 100 map unit of chromosome 1"; RL Gene 239(2):309-316(1999). XX DR MD5; 5fb89bc33012c6709398b08292cb53af. XX FH Key Location/Qualifiers FH FT source 1..741 FT /organism="Arabidopsis thaliana" FT /chromosome="chromosome 1" FT /map="between mi303 and mi259" FT /ecotype="Columbia" FT /mol_type="genomic DNA" FT /clone="YAC clone CIC5D1" FT /db_xref="taxon:3702" XX SQ Sequence 741 BP; 157 A; 118 C; 136 G; 330 T; 0 other; gaattcttag ggtttctgaa tcttctggtt ctcttcgcaa tcgaattctc tgaagtcaaa 60 ccaaagtttt tggtatttct ctctgtaagt catgtttttt ttttttttct gaaatctctt 120 cgatttggtt tattctgtta tacaacttcg tgttgtatct gtaatttttc tgacgaattg 180 gatttgatga ttttgcttcg attgatttcc ctgggaatcg aaattgtgtt tgtttcactg 240 gatttagtgg aatgcgattc tctgattcat tgtttgttct acgtttccgc gttttcatct 300 atcgtagttc tactttattg tttaggcacc attgaaattg cgaatcgtaa ttttgattaa 360 cggaaaacag aaattgataa cttgaaattg aatctcagtg cattatgttg tttgttatct 420 ttgggtcgta tgtaaccaac ttatcttcct ctgcaagttt aggtactgat tatgatttga 480 ttcatgtttc caatttttcg tatctgcaat gcaaatgcag aaagttttgg ttagtgttaa 540 gatagtttgg attcaactta cacgtttgat cgacgattgt ttatcagtct ctttcgcggt 600 gtttcgttag cctatctgtt tttttaagca ttggatttca ggacttttgt tatttcgatg 660 ttcttatctt ttttcttttt gtgatgtttt cttacagttt ctcctgccaa tctaagaacc 720 tcctgtattg ctaggttggc c 741 // ID AB030799; SV 1; linear; genomic DNA; GSS; PLN; 1582 BP. XX AC AB030799; XX DT 14-DEC-1999 (Rel. 62, Created) DT 17-FEB-2004 (Rel. 78, Last updated, Version 5) XX DE Arabidopsis thaliana DNA, chromosome 1 between mi303 and mi259, left end of DE YAC clone CIC6D4, partial sequence. XX KW genome survey sequence; GSS. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. XX RN [1] RP 1-1582 RA Kato A., Komeda Y.; RT ; RL Submitted (04-AUG-1999) to the INSDC. RL Atsushi Kato, Graduate School of Science, Hokkaido University, Division of RL Biological Sciences; Kita10, Nishi8, Kitaku, Sapporo 060-0810, Japan RL (E-mail:atsushi@sci.hokudai.ac.jp, Tel:81-11-706-2740, Fax:81-11-706-4851) XX RN [2] RX DOI; 10.1016/S0378-1119(99)00403-5. RX PUBMED; 10548732. RA Kato A., Suzuki M., Kuwahara A., Ooe H., Higano-Inaba K., Komeda Y.; RT "Isolation and analysis of cDNA within a 300 kb Arabidopsis thaliana RT genomic region located around the 100 map unit of chromosome 1"; RL Gene 239(2):309-316(1999). XX DR MD5; f0ef732f06a90c584fc52e970a511c7a. XX FH Key Location/Qualifiers FH FT source 1..1582 FT /organism="Arabidopsis thaliana" FT /chromosome="chromosome 1" FT /map="between mi303 and mi259" FT /ecotype="Columbia" FT /mol_type="genomic DNA" FT /clone="YAC clone CIC6D4" FT /db_xref="taxon:3702" XX SQ Sequence 1582 BP; 373 A; 334 C; 366 G; 509 T; 0 other; gaattcaaaa ctattttccc ttgcacaggg ctgggggggg aaagaggaag gccttggctt 60 gacgtcatgt gccgcaaaaa acagttgtga ccaggtttct ctccagctag gtcgtactct 120 tcattttgaa ttttatcctt ctgatgaatc accaagtgag cttcctggcg gtttacaagt 180 tattcatgta cctgatgtca gcatatgcgc agagtctgac ctggaacttc tgaacaaatt 240 agtcattgat cacaatgttc ctcccagttt aagatttgcg ttgctgacca aaatgagatt 300 tgcaagggcg ttctcctctt tggcaacccg gcagcagttt acatgcattc gcttatatgc 360 tttcgttgtt ttggttcaag caagtggtga cactgaaaat gttgtttctt tctttaatgg 420 cgaaccggaa tttgtaaatg agttagttac gctggtaagc tatgaggata ctgttccaga 480 gaaaataagg atactatgct tgctatcctt ggttgcacta tcgcaggatc gaactcggca 540 gccgactgtt ttaactgcag ttacctctgg cgggcatcgt ggtttgctat ctggcttaat 600 gcagaaagcc attgattctg ttgtttgtat tacttccaag tggtctcttg cttttgcgga 660 agccttgtta tcccttgtga cagtcctggt ttcatcatcg tctggatgtt cagccatgcg 720 agaagctggt cttatcccga ccctagtgcc tctcatcaaa gatacagatc cccagcactt 780 gcatttggtc agtgccgctg tgcatatatt agaagccttc atggattaca gcaatccagc 840 tgctgctttg ttcagagatt tgggtggctt ggatgatact atctctcggt tgaaactgga 900 agtctctcgt actgaagacg atgtgaaaga aaaaaattgc agttctgata gcaatgggcc 960 tgatactgaa caacttccct attcggaagc attgatttcg tatcacagga gattgttgtt 1020 aaaagcgttg ttacgtgcaa tatcccttgg aacttatgct cctggtaaca ctaacctcta 1080 tggttccgag gagagcttgt tgcctgaatg cttatgcatt atcttccgaa gagcaaaaga 1140 tttcgggggt ggagtattct cgcttgctgc cgctgtcatg agtgatctca ttcataaaga 1200 tcccacttgt ttcaatgctt tagattcagc tggtttaact tctacctttc ttgatgctat 1260 atctgatgag gtcatctgct ctgcagaagc cataacatgc ataccgcagt gtctggatgc 1320 tctgtgtctc aacaatagtg gtcttcaagc tgtgaaggac cgaaatgcct tgaggtgttt 1380 tgtgaaaata tttacttctc cctcttatct gagggctctt acaggtgata cacctggttc 1440 tttgtcaagt gggcttgatg aactcttgag acatcaatct tcgttgcgca cttatggagt 1500 tgatatgttc attgaaatcc tcaattccat gttgattatt ggatctggga tggaggccac 1560 cacctctaag tcagctgatg tg 1582 // ID AB030800; SV 1; linear; genomic DNA; GSS; PLN; 737 BP. XX AC AB030800; XX DT 14-DEC-1999 (Rel. 62, Created) DT 17-FEB-2004 (Rel. 78, Last updated, Version 5) XX DE Arabidopsis thaliana DNA, chromosome 1 between mi303 and mi259, right end DE of YAC clone CIC6D4, partial sequence. XX KW genome survey sequence; GSS. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. XX RN [1] RP 1-737 RA Kato A., Komeda Y.; RT ; RL Submitted (04-AUG-1999) to the INSDC. RL Atsushi Kato, Graduate School of Science, Hokkaido University, Division of RL Biological Sciences; Kita10, Nishi8, Kitaku, Sapporo 060-0810, Japan RL (E-mail:atsushi@sci.hokudai.ac.jp, Tel:81-11-706-2740, Fax:81-11-706-4851) XX RN [2] RX DOI; 10.1016/S0378-1119(99)00403-5. RX PUBMED; 10548732. RA Kato A., Suzuki M., Kuwahara A., Ooe H., Higano-Inaba K., Komeda Y.; RT "Isolation and analysis of cDNA within a 300 kb Arabidopsis thaliana RT genomic region located around the 100 map unit of chromosome 1"; RL Gene 239(2):309-316(1999). XX DR MD5; b9d736639f63b756363aac6b21899155. XX FH Key Location/Qualifiers FH FT source 1..737 FT /organism="Arabidopsis thaliana" FT /chromosome="chromosome 1" FT /map="between mi303 and mi259" FT /ecotype="Columbia" FT /mol_type="genomic DNA" FT /clone="YAC clone CIC6D4" FT /db_xref="taxon:3702" XX SQ Sequence 737 BP; 200 A; 102 C; 189 G; 246 T; 0 other; gaattcgaaa aggagaagct tcaaagctat cgagttaggg agtgaagaaa ctgctagagt 60 tttaggtcaa gtgattgata ctttgggttt agctcctgtg catttggttc ttcatgattc 120 agctttaggg ttagcttcga attgggtttc tgagaattgg caaagtgttc gaagtgtaac 180 tcttattgac tctagtatta gtccggcttt gccgttgtgg gttttgaatg taccggggat 240 tcgagagatt ttgttagcgt tttcgtttgg ttttgagaag ctagtgagct tccggtgctc 300 aaaggagatg actttatcgg atattgatgc tcataggata cttttgaagg gaagaaatgg 360 gagagaagct gttgttgctt cgttaaacaa gttaaaccat agctttgaca ttgcacaatg 420 gggtaattca gatgggatta atggtattcc gatgcaagtg atttggtcta gtgaagcgtc 480 taaagaatgg agtgacgagg ggcaacgtgt agctaaggct cttccgaaag caaagtttgt 540 cacacattca ggcggccggt ggcctcaggt tagatattct tcggactttt aagtcatttt 600 agttttattg aattggtcaa aagcagaagg ttttgtgttt atactaaaat caagtatgta 660 tctctagtaa tgagtaaagt tataaccaga tccaatttca aaatttagag catctttatc 720 aactattttt gagattg 737 // ID AB030801; SV 1; linear; genomic DNA; GSS; PLN; 795 BP. XX AC AB030801; XX DT 14-DEC-1999 (Rel. 62, Created) DT 17-FEB-2004 (Rel. 78, Last updated, Version 5) XX DE Arabidopsis thaliana DNA, chromosome 1 between mi303 and mi259, Sp6 side of DE P1 clone C15J, partial sequence. XX KW genome survey sequence; GSS. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. XX RN [1] RP 1-795 RA Kato A., Komeda Y.; RT ; RL Submitted (04-AUG-1999) to the INSDC. RL Atsushi Kato, Graduate School of Science, Hokkaido University, Division of RL Biological Sciences; Kita10, Nishi8, Kitaku, Sapporo 060-0810, Japan RL (E-mail:atsushi@sci.hokudai.ac.jp, Tel:81-11-706-2740, Fax:81-11-706-4851) XX RN [2] RX DOI; 10.1016/S0378-1119(99)00403-5. RX PUBMED; 10548732. RA Kato A., Suzuki M., Kuwahara A., Ooe H., Higano-Inaba K., Komeda Y.; RT "Isolation and analysis of cDNA within a 300 kb Arabidopsis thaliana RT genomic region located around the 100 map unit of chromosome 1"; RL Gene 239(2):309-316(1999). XX DR MD5; 74bd902869946b0601a29990c381c363. XX FH Key Location/Qualifiers FH FT source 1..795 FT /organism="Arabidopsis thaliana" FT /chromosome="chromosome 1" FT /map="between mi303 and mi259" FT /ecotype="Columbia" FT /mol_type="genomic DNA" FT /clone="P1 clone C15J" FT /db_xref="taxon:3702" XX SQ Sequence 795 BP; 315 A; 165 C; 125 G; 190 T; 0 other; tcacgattca atgctcatca aagatgttaa ccatttagag aaagcttcac tctttttgag 60 taatagacct acaaatcaaa tctaacaaca ctctaaccac aatgtaatcc ccaaaacaac 120 acactaacca atcaaaagac aacatatttc gaattcaatc aatcaaaaag ctaaaacaaa 180 ccttcgagat acacaagaaa gacaataacc cacgaagcca aatcaatcaa aaaacacaga 240 gcaagaccaa aaccaataga gaaatgcaga gaggaacaaa agatggattt ttgatgaaat 300 gagagattag agattagaga aagagagaga gagagagacc tctgaaagtg ggattattat 360 cgaaagatcc gtcagataag cgagaagaag aaacaactct cttcttctga atctttcgtc 420 ttgtccgagt ctttctcctt ttgcttgacc ttattttacc tcctacacag ctcttaggcg 480 ttgacacgca acctcccatc tctctcacct ctgatcacaa attcaacata taagaaagat 540 ctctttctaa acccagaact tttagagaga gacagagaga gaaagctgtc tcctttatct 600 ctttctctta aaaacccaaa acttgtagag agagaaagct aacaaaaaag ttgtttcctt 660 ttacttctct ctgatcagaa aatcagataa aatctgccag acacgatctt caaatccagt 720 aatgggaaaa atttagagag aaaatatggt aaatgagaca cagacaacta gacaaactgt 780 ttggtgaaga agaag 795 // ID AB030802; SV 1; linear; genomic DNA; GSS; PLN; 2500 BP. XX AC AB030802; XX DT 14-DEC-1999 (Rel. 62, Created) DT 17-FEB-2004 (Rel. 78, Last updated, Version 5) XX DE Arabidopsis thaliana DNA, chromosome 1 between mi303 and mi259, T7 side of DE P1 clone C15J, partial sequence. XX KW genome survey sequence; GSS. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. XX RN [1] RP 1-2500 RA Kato A., Komeda Y.; RT ; RL Submitted (04-AUG-1999) to the INSDC. RL Atsushi Kato, Graduate School of Science, Hokkaido University, Division of RL Biological Sciences; Kita10, Nishi8, Kitaku, Sapporo 060-0810, Japan RL (E-mail:atsushi@sci.hokudai.ac.jp, Tel:81-11-706-2740, Fax:81-11-706-4851) XX RN [2] RX DOI; 10.1016/S0378-1119(99)00403-5. RX PUBMED; 10548732. RA Kato A., Suzuki M., Kuwahara A., Ooe H., Higano-Inaba K., Komeda Y.; RT "Isolation and analysis of cDNA within a 300 kb Arabidopsis thaliana RT genomic region located around the 100 map unit of chromosome 1"; RL Gene 239(2):309-316(1999). XX DR MD5; 139963aed44749385f4c55ba6eb78839. XX FH Key Location/Qualifiers FH FT source 1..2500 FT /organism="Arabidopsis thaliana" FT /chromosome="chromosome 1" FT /map="between mi303 and mi259" FT /ecotype="Columbia" FT /mol_type="genomic DNA" FT /clone="P1 clone C15J" FT /db_xref="taxon:3702" XX SQ Sequence 2500 BP; 856 A; 533 C; 415 G; 696 T; 0 other; caaagataga atacacaaag caataaaagc gctctactcg actcctcaaa acagtttaca 60 agtgttcttg aatggttctc tagtatttgg aggcttccgt ggtggtatat gcaaaacaac 120 ctcaaagctt gaattagctt ttgagcatac actcaaagat ttcttcaaaa ccgaagatga 180 ctgcggccta cgtgcaaatg ctttcataga gcttgttgca gaaactgttt acgcatctgg 240 agctttagat cagcttcttg aggttcaaaa gcttgacaaa tataacatcg agggagcgat 300 tcacgcgtac tatgacttag ttgaccagcc atgtaaagcg tgccaagagt tggaaagtag 360 taaattatcg aatcagtttg gttccatgca ttcattgcca caggatgaga aagtaaatat 420 tttgaaggat tttctaatat cttccactgc tatagattgt agtgtaatga taagttttag 480 accaatagag actgggctct caagatcctc ttcccacggt aacattcaac ttgaatcaac 540 aaagcaagaa tttgagtata aggtacatgt tttttttcac aagaatcttt gcctttgtta 600 aattgttttt tctcataatt aaactgaggt ctacatcgtc ggcagataca cttcattgat 660 cttgatatga gacctttaaa gagaatggaa gcctatcacg aatcagacaa gaagatcaca 720 aaaacatacc aggagatgct caagaagaag aaaggagatc aacctcggcg cttctagaac 780 tacaaagcta taagaatcag atttcatatc tcataagagt attttatgtt tcgtaacaat 840 ttcctactgt tttcacttgt atcaattcat aagactcaat ctaagcatta aagcatcatg 900 ttaacaaatc caaggaaagg ggaatacatg tatgtactat gtttgttttt aaaatggtta 960 ttataaaata agttgagaaa aaatatcatt ctactgaatt tgtttgactt tattaattcg 1020 ttcttctgtt tttactgctg atgaaatgtc gatatcaaca cttattatac tagatcattc 1080 ataattgata ttgttccttg aacaatttat acatgttaga ctgattaatt gcaagaactt 1140 agaaatagac atgcattatt gcaaaatgtc atttcatgga agcaaatatc taacaaaagc 1200 caaacataac taaattatga ttatccttgt aactgaaact ccaatatcaa aaactgataa 1260 aagacaacca agaaacaaga ccggaaagat aaatatttgc gataaccaaa acctataaac 1320 caaactcatc tcatgaaggt cttaagcttg gtcttcaccc tcagtgataa ccttggttgc 1380 agaaacagcc ttagtcgaca ggaaatcagt gtgctcttgg tacggcgatc tggagaatct 1440 agtctctttc cagaactctg gtgtaaggaa cccatatgtc ttctgtaagc aatcgaatgt 1500 agcctgtatc ataacaccaa caacatcaac actatggtta agataatcaa gcaacatcat 1560 gccaagagtt caaaaaagaa atcaagaata tcaatctatc acaaattatg aagcatctac 1620 atccatcaaa ttaagtactt gagatgaaaa tcatcaacaa aatctatgat catctacaaa 1680 ttgcaatcag ctacatttag acgcttcatt tatcaccaac tactaagcaa atgtgaacta 1740 aatccctatt aagggataat caaatcatta aaagcagagc taaatcaaag aactctacag 1800 ctaaacatta tcaaatgctt caaaaaagaa ggatcaaaat caaaccttga caaagtttcc 1860 aagggttttg gtagatcctc ttgaagaagt aaagacatca tcaataccag cgaactgaag 1920 aaccttctta ggaaccctag cagcaacaat accagaacct ctcggagcag gaaccattct 1980 cacagtaaca gaaccacatt taccagtaac cttacaaggc acagtgtgtg gcttcccaat 2040 cttattcccc caataacctc tcctcaccgg aaccactgat agcttagcaa gaataatagc 2100 tcctctaatg gcagtagcaa cttccttaga acacttgaca cccaaaccaa catgaccatt 2160 tccatcacca acaacaacaa aggccttgaa tctagtcctt tgaccagctc tggtttgttt 2220 ctgaacaggc atgatcttca taacctcgtc tttcaacgta ggaccaacaa gatgatctat 2280 gatttggtac tcctttactg ggagagaatg aagatagatc tgctctagct tcgttatttt 2340 attgtcagcc actagacgac ctagtttggt cactggaacc catttcgttt cttccgaggc 2400 acggcctcca cgtcttccac ggcctcttgg accacgatca cggccacggc cacctccacg 2460 tccaccgccg aatccacgcc cgaagtcacc acggtcaccg 2500 // ID AB030803; SV 1; linear; genomic DNA; GSS; PLN; 1695 BP. XX AC AB030803; XX DT 14-DEC-1999 (Rel. 62, Created) DT 17-FEB-2004 (Rel. 78, Last updated, Version 5) XX DE Arabidopsis thaliana DNA, chromosome 1 between mi303 and mi259, Sp6 side of DE P1 clone R18I, partial sequence. XX KW genome survey sequence; GSS. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. XX RN [1] RP 1-1695 RA Kato A., Komeda Y.; RT ; RL Submitted (04-AUG-1999) to the INSDC. RL Atsushi Kato, Graduate School of Science, Hokkaido University, Division of RL Biological Sciences; Kita10, Nishi8, Kitaku, Sapporo 060-0810, Japan RL (E-mail:atsushi@sci.hokudai.ac.jp, Tel:81-11-706-2740, Fax:81-11-706-4851) XX RN [2] RX DOI; 10.1016/S0378-1119(99)00403-5. RX PUBMED; 10548732. RA Kato A., Suzuki M., Kuwahara A., Ooe H., Higano-Inaba K., Komeda Y.; RT "Isolation and analysis of cDNA within a 300 kb Arabidopsis thaliana RT genomic region located around the 100 map unit of chromosome 1"; RL Gene 239(2):309-316(1999). XX DR MD5; 30bdf8752e115f62d21d16c7c27b1037. XX FH Key Location/Qualifiers FH FT source 1..1695 FT /organism="Arabidopsis thaliana" FT /chromosome="chromosome 1" FT /map="between mi303 and mi259" FT /ecotype="Columbia" FT /mol_type="genomic DNA" FT /clone="P1 clone R18I" FT /db_xref="taxon:3702" XX SQ Sequence 1695 BP; 444 A; 316 C; 331 G; 604 T; 0 other; gtttcaacta acattacaaa ctgatttaga agtttccact gcatttcttc tcagtttttc 60 acctggtcct gacagataaa gacttctttt actttaatgg gatacaaatt gaactttgga 120 agtggcagtc tgattgtctg atactgcata gacttgtata gttttgttta ctcggtacag 180 ttttaaacca tcattaatga tttgtagcac catattcgac aattcagtat agttaactaa 240 gatttttcac ttttgtggta gcgattagaa gtagcaatgc ttgattttaa ttagtcacaa 300 tatagaatag cttactaaag ccacaaaatt ttctgcgttt tgcaggaacg ttcagctgct 360 tttgtgtttt ttaagactcg ctatgatgct cttgttgttt cggaggttct acaatcatca 420 aatcctatgt tatgggtgac agacttagcc ccagaacctc atgatgtgta ctggaagaat 480 ctcaacattc cttatcgaca actttggata cggaaaatag caacccttgt tggtgcagtt 540 gctttcatgt ttgtgtttct tattcccgtt accttcattc aagggctgac tcaactagtg 600 cagctgtctc acgcatttcc ttttctaaga ggcatcttga gcaagtgagt gccctgctgg 660 ttccttacgc atgtatatat atatggtttt gtttcttctg gacatgatat tagaattggc 720 gttaaaaagt aggcggaact ccggtgcagt atagaacaca cgagccttct ctatagcttt 780 caaaccattg gagaaatcaa aatttatgtt cttgatttgt tttatcatct ttcaagttaa 840 tcgggccacc aaaaccattt tgcaggaact ttataaacca ggtcatcaca gggtacttac 900 ccagtgtgat cttgattcta tttttctatg ccgttccacc attgatgatg tatttttcgg 960 ccttggaggg atgtatttca cggagtataa ggaagaagag tgcttgcatc aaagtcttat 1020 attttaccat ttggaatgtg ttcttcgtga atatattatc agggtctgtt atcaggcaac 1080 tgaatgtctt ttctagtgtc agagacatac ctgcacaact tgctagagca gtgccaacac 1140 aggtaattta cccatagtcc ttttacattt cagagcaaaa gtttgaattt tgctaatgtt 1200 caggtttcta cagtctctga acattagcta ggttacattt tgccaagatc ttgcagcttt 1260 cggattggat atagtgtttt cttgcgctgg aactttaata gtttgttctt tttcctcgtt 1320 ccatgataaa attatatatc agagatatta aagcccattg gaggaattat ttgggattga 1380 gcttttctgg ttgcttgtgt ttcatattta ttaggaaaaa tgaaaattgt atcattgatt 1440 ttgaatatgg ctttaaccat gtatgcaggc tggcttcttc atgacctatt gtttcacatc 1500 tggttgggcc agtttggctt gtgaaataat gcagcctatg gctcttatct ggaatctggt 1560 agcaaaagtt gttaccaaga acgaggatga gtcatatgaa acacttaggt tcccatacca 1620 caccgaaatt cctcggctgc ttttgtttgg gctcctgggt ttcaccaatt cagtcatagc 1680 accactgata ctgcc 1695 // ID AB030804; SV 1; linear; genomic DNA; GSS; PLN; 3419 BP. XX AC AB030804; XX DT 14-DEC-1999 (Rel. 62, Created) DT 17-FEB-2004 (Rel. 78, Last updated, Version 5) XX DE Arabidopsis thaliana DNA, chromosome 1 between mi303 and mi259, T7 side of DE P1 clone R18I, partial sequence. XX KW genome survey sequence; GSS. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. XX RN [1] RP 1-3419 RA Kato A., Komeda Y.; RT ; RL Submitted (04-AUG-1999) to the INSDC. RL Atsushi Kato, Graduate School of Science, Hokkaido University, Division of RL Biological Sciences; Kita10, Nishi8, Kitaku, Sapporo 060-0810, Japan RL (E-mail:atsushi@sci.hokudai.ac.jp, Tel:81-11-706-2740, Fax:81-11-706-4851) XX RN [2] RX DOI; 10.1016/S0378-1119(99)00403-5. RX PUBMED; 10548732. RA Kato A., Suzuki M., Kuwahara A., Ooe H., Higano-Inaba K., Komeda Y.; RT "Isolation and analysis of cDNA within a 300 kb Arabidopsis thaliana RT genomic region located around the 100 map unit of chromosome 1"; RL Gene 239(2):309-316(1999). XX DR MD5; 7c16282f9edeccf63070ca65cf0d0c0e. XX FH Key Location/Qualifiers FH FT source 1..3419 FT /organism="Arabidopsis thaliana" FT /chromosome="chromosome 1" FT /map="between mi303 and mi259" FT /ecotype="Columbia" FT /mol_type="genomic DNA" FT /clone="P1 clone R18I" FT /db_xref="taxon:3702" XX SQ Sequence 3419 BP; 1074 A; 681 C; 533 G; 1131 T; 0 other; aacaacttca gatttcctag tgagtaaggt atatgagtta cctctgcata ctctaagctc 60 aagtatctta agtggatgag ctttccaatg caagaagcta acttccctcc tttaatcttc 120 acttcaataa gatctaacac cctcagaagt tctaaccttg taaagcttga acctgccagg 180 ttccaacttc ccaaggtaac aaccacgaga gctcgaagtt ttggattgtt tatatctttc 240 tcaacatgta aagtagtagg atattggtag acaaacctgc gagatgtgac agtagactgc 300 aagtttgcag ttgaagggcg gctactggta atttgtagga agttttcttc tttagctttt 360 aacaaacaaa cttctctcat catgtcatgc aaatgacaag tttcaaatct cgaagtcttt 420 acatctcttt cggaaatgac catattcctc ctcaccagct cctctatgta gacatctcca 480 acatctcgaa tggtctctcc atcgtaatgc ctaggttgga atattccttc tgcagcccag 540 taatatgaca agttctctac ctttatctca taatcttctg gaaaatgggc caagtagagg 600 aaacaatgct tcaaataact tggcaattct tcaaagctta gagacaatac attgttacat 660 gtattgttgt tgtcgtcatt aaagttagtt cttcctccca cgagatgaga tccaatattc 720 tcagataatc ttctccaatc atgcgatgtg tatttttcag ctaacatacc tcctaacact 780 ctgatggcca atggtaaccc tccacagtgt ttgatcatta gcttacccaa ctcttccttt 840 tcctcatcaa tcttaaattc tgcacaacgt tatcaatatg tcaaaatcgt tttacaagta 900 gactacaaaa ccaagatact aacaagccag agatgcatta aaagtaccag ctgcatcttt 960 cataggaagt gctatcctct gaaaaagtgt ccaactgtct tcagtggtta ggcattctgg 1020 tttaaagttg atatatgatg tatttctacg catggcgaca ctctcatttc gagaagtaag 1080 caacactttc caacctgcca aaaacaaaca caaagagtta gctagcttat tgagtaagac 1140 cagtggctag tgtgtgtacc ataagaggta acctttggtc ggtggaaata ttggcttgat 1200 tagttcccaa tcttcttttt cccatatgtc atcgaggaca attaatgact tagacgtttc 1260 caacaatcga attagttcac cttggagtgt atcttgtgtc atctccatga ttttcttttc 1320 ttcctctttg ggtttgaggt ccctcaagat cttttgccat acattcattc gggtaaaatc 1380 ttgtgaaaca cacacccatg agagcccatc aaactgatgt ttaacatcct catggttaaa 1440 aacctgttta gcaagtgtgg ttttacctag accacccata ccggttatgg aaaccacttg 1500 aacgtttgct tcgtccacca aatatccaac caatttctta acatttgcct ccaaccccac 1560 aaaatcgctg tcgtcgtcct tagaaaattt ttgtcgcatc tccctttgtt tatcaccttg 1620 aggttgctta tacccaccat caacgatagc ttgttgcact ccaaaactct gcatatctcg 1680 gatcaccttg gagatcctat tacttaagcc tccgatacct aatgcatatc tcctccgatc 1740 tggaataatg caagcaagtc ttctgatact cttcttgata ccacttgttt ttcccaggtt 1800 ttgctcaaga acaaatgttt cgattgtatc ctctccatca tagataattt ccttgatctc 1860 ttcaacacag tttttcacca ccgcacttgt atgtttcttt gcatttgcat ctttcagaaa 1920 agagcttaac atgtttagat ccctttttag ttcagttact tgatcttcga ctccctgaaa 1980 tagctcgcat tcttgactca gtaggttcca caggttttgt ataccaaacg aaataagttc 2040 cccagccata atgcttcctg cttaagtaag tagtatatat gaaaatatga atcaagctac 2100 gaaatattga tgatcatgca ttatcattaa tagtgatatc taatcagtta gaaaaatata 2160 ttcaagcttt gtctcttgag tcttgacaca cctaggtcta tccaggatat ggacaaagtt 2220 taactgttac tactcgaaag atttagagaa acaaatagag atatctttca ccgtaaacaa 2280 agaaatttgc taagaaaatg gactaacctc ttgatggttc caaggaatct cctcaagtaa 2340 gaagagattt gattgatacc gctagacttc ttgggactcc tctcgtcgtc tttggataag 2400 cacacgaaag tctctggttc agactttcca acttctcgtg atggatttct taaaaggaca 2460 acttctttgt atccacccat ttcctatctt acttagtctt agtcctcgag tttttgtggt 2520 caacaaaata cacaaacagt ataaaggaaa gtttctagaa ggagaaacag agtattgaca 2580 aatcaaaaaa aggtattatt tacatcaaga taatataata caaagagttt acgtcctcat 2640 gttagccccg cgacgcgttg gtaaatttaa tataataaaa tatataaata tatctagttt 2700 ttaattaatt aatatactta attgaaggag ttaaaattat ggtataaaaa ataaagatgg 2760 aaaaaattct tgtaaaattg gaaaattatt gtagtagtga actattaccg tgtaatctaa 2820 aacataatat gatgtcaaaa ttgaaaattt gtttttgtaa ttagttaaat gaattacaat 2880 tatgctagaa aaaaattcat ctcaaaattg tagtttaata taataaaata tgactaaaat 2940 ctctatgaat aaccttaaac tatgaataat ctcaaaattc ttataaacaa ttgtaggctt 3000 acaaaacaac gttgttttct taacggtgtg ggtgattagt tcaatttcaa aacgcctctg 3060 atttggtatt gattgtataa ttccattaat tttgccaatc ccattaatta tgcctgtttt 3120 gtaatgattt gatacgtatt agtgtttatg ggttttgtct ttctttgatt caatgtaaat 3180 taaaatgtta caatataaca acttgaagaa aatattaaca catgaatgca tatcattgta 3240 taaactcgat gctcattata ggctctatac cacgtcatcc atgtcatttc tatcgaactg 3300 tagtcttggt ttagtctggt taatctctac ttgcttcatt ataaaataag taagccatta 3360 aacatatgaa gcataataag caaaatatga cgtaaaatca tcctaatgtc aattatgaa 3419 // ID AB030805; SV 1; linear; genomic DNA; GSS; PLN; 1363 BP. XX AC AB030805; XX DT 14-DEC-1999 (Rel. 62, Created) DT 17-FEB-2004 (Rel. 78, Last updated, Version 5) XX DE Arabidopsis thaliana DNA, chromosome 1 between mi303 and mi259, Sp6 side of DE P1 clone X7J, partial sequence. XX KW genome survey sequence; GSS. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. XX RN [1] RP 1-1363 RA Kato A., Komeda Y.; RT ; RL Submitted (04-AUG-1999) to the INSDC. RL Atsushi Kato, Graduate School of Science, Hokkaido University, Division of RL Biological Sciences; Kita10, Nishi8, Kitaku, Sapporo 060-0810, Japan RL (E-mail:atsushi@sci.hokudai.ac.jp, Tel:81-11-706-2740, Fax:81-11-706-4851) XX RN [2] RX DOI; 10.1016/S0378-1119(99)00403-5. RX PUBMED; 10548732. RA Kato A., Suzuki M., Kuwahara A., Ooe H., Higano-Inaba K., Komeda Y.; RT "Isolation and analysis of cDNA within a 300 kb Arabidopsis thaliana RT genomic region located around the 100 map unit of chromosome 1"; RL Gene 239(2):309-316(1999). XX DR MD5; 5737a291dbd68a7750bcfef08cefd1a8. XX FH Key Location/Qualifiers FH FT source 1..1363 FT /organism="Arabidopsis thaliana" FT /chromosome="chromosome 1" FT /map="between mi303 and mi259" FT /ecotype="Columbia" FT /mol_type="genomic DNA" FT /clone="P1 clone X7J" FT /db_xref="taxon:3702" XX SQ Sequence 1363 BP; 389 A; 316 C; 291 G; 367 T; 0 other; ttaagataga catccataga cttatccttt ttactaatat tctgaagacg tctctgaagc 60 tcaaacaacc tagaggaaga gatcttatta cagtgtctag caacagagag ccatacctca 120 tgagacgttt tacagtcgac ggcgacgctg agaaagtctt ctgagaaaga accaagcagc 180 caggacttca ctacactgtc tgttttgaac catgtgaagt attcttggtt tggagaagag 240 gaggtagaac catcgatgtc ggagaccaca cttgttgtgt tcggagcagg gatggagcca 300 atgacaaacc ctagaagccc ttggccgtca agaaacgatt caaactgaga tttccagagg 360 atgtagttct ttgaagtgag agtaacggtg acacaatttg agatgtttag agaagggagt 420 gagtagagtt ccatggatct attctccatg agctctgata ccatgaagac aaaatcaatc 480 tttttaggtt ttcattgata gtttgcttaa agcttacaac ttgagtttga gaatacttaa 540 atacaaaggt ggagacttag ctaaaaccct agagacattg gacagatgtc atacatcaag 600 ttgagtcttc tgaatcaagg gttgagaaac gattctcgag ctttacgttg aactgctttg 660 ccgtacaaga ggtcgttgtc tccttattgc cagctccact tttgtcatta cttgaggaag 720 attctagact ctgtttactt gaaacagatg accgttgctt ctgcttcttg ggcttggttt 780 gtgcgaggcc catctgtttc attttcctct ttgctccatt agccgaaacg acaacgtatt 840 gtcgtttgcc agagaaagcc tctgctctta cctgtattgt gttgatagac acctctacct 900 gctgaaacgg tcatcgttaa cgcgatcgtc actcctaacg ctgcctacaa acactggtta 960 tatctggcgt gcgcacttgt gggatttggg cttagatccg ccgactccct acttagagag 1020 aaccgagtga ctgctgaaaa cgtagaaaca caccaccctg agaaaacctt tgccataaca 1080 ctaacggaga agctaatcac actattagac tccaaccttc ccacgccgaa aaacttaaca 1140 ggaaccaaca aactcacacc atcaaaatgg cgtctctgtc gtgaccaata cgaagggatc 1200 ttgtcttgcc tcacccaaaa ttttgacaga acgctccttt gagagaccgt gttgccgtcc 1260 tcggagcaac ttcttctttt cagggaaata accgcatgat caacagaagg agctccacca 1320 ccgttactaa ccgtctagag tcatacgacc tcaccacact gca 1363 // ID AB030806; SV 1; linear; genomic DNA; GSS; PLN; 1230 BP. XX AC AB030806; XX DT 14-DEC-1999 (Rel. 62, Created) DT 17-FEB-2004 (Rel. 78, Last updated, Version 5) XX DE Arabidopsis thaliana DNA, chromosome 1 between mi303 and mi259, T7 side of DE P1 clone X7J, partial sequence. XX KW genome survey sequence; GSS. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. XX RN [1] RP 1-1230 RA Kato A., Komeda Y.; RT ; RL Submitted (04-AUG-1999) to the INSDC. RL Atsushi Kato, Graduate School of Science, Hokkaido University, Division of RL Biological Sciences; Kita10, Nishi8, Kitaku, Sapporo 060-0810, Japan RL (E-mail:atsushi@sci.hokudai.ac.jp, Tel:81-11-706-2740, Fax:81-11-706-4851) XX RN [2] RX DOI; 10.1016/S0378-1119(99)00403-5. RX PUBMED; 10548732. RA Kato A., Suzuki M., Kuwahara A., Ooe H., Higano-Inaba K., Komeda Y.; RT "Isolation and analysis of cDNA within a 300 kb Arabidopsis thaliana RT genomic region located around the 100 map unit of chromosome 1"; RL Gene 239(2):309-316(1999). XX DR MD5; 1b11faeee6e261fb848514db1b8aad44. XX FH Key Location/Qualifiers FH FT source 1..1230 FT /organism="Arabidopsis thaliana" FT /chromosome="chromosome 1" FT /map="between mi303 and mi259" FT /ecotype="Columbia" FT /mol_type="genomic DNA" FT /clone="P1 clone X7J" FT /db_xref="taxon:3702" XX SQ Sequence 1230 BP; 423 A; 199 C; 153 G; 455 T; 0 other; tagcaataaa gccatgcatt agttgtttcg atattccata ttcctagaga agaggtttga 60 gaatgtacta gatgatcgtc gacgtaggag catgagcgga tccactaaga agtaagaact 120 ttatgaggtc atgtgacacc gttaaaattt tagttttaat ttcttttatt caaatttggt 180 tagatttagt ggatgatcat aaaatggtaa aaaaagcacc atttggctcc gttaagatag 240 atacccaatc tttgtatgac ccgcccttat attattttct tttagcttct gatattattt 300 ctatgttttc ccaacttcaa attacaaatt cttccatctt acttttatac agtctttata 360 ttaaaagttt atccttattt ttaagcactt gttttcatta ttttcaaaat tttattttaa 420 ccatatttta tgcacttttt atttaatgtt agttagatta tatcccgatg accttcattt 480 ctcaatttag tttacttgcg gaatttgctc aaaaaaaaaa aaatttgcga aaaagacaca 540 tgcattttat ttaagtggca gttctatatt ttcgagttgt agctttgaaa aggaaacatt 600 tttcactata ttttatttca tcggcatgga aatttgggcg tagaaatgga ctaacatata 660 cttaatattg caacattttt tttttgttaa agactactaa aacaatctag gtactttcat 720 ttcaatatat tcaacttgaa attatcaaat ttgttcatgc tacacaccaa actcaaactt 780 gcactactac acaccaaact caaaagtaaa ggaaaaacag aaaaataaaa tcacctatca 840 gtttgttgtt gatcagtctt cacaccataa cacctatata tagctttgag aactacaaac 900 ctttcggaaa gaaataatat aaacatcaaa aacctttttt tttgataaaa aaaacattga 960 aatcctgttt cactcaggtg ttcctttgtt ttgaactact aattaacata tatatatata 1020 tatatatata tatacataac cattccaagg cataacaatc taaaatctat cccggataaa 1080 tttttgttag atttttacta tttatttaac tatttaaggg cattattaat cacattccct 1140 ctttttgtca atgactgggt aaatataaac cgaaatctat agaaatcctt gattacttat 1200 acaaggcaag gtttgcaaac cacatagatt 1230 // ID AB030807; SV 1; linear; genomic DNA; GSS; PLN; 2777 BP. XX AC AB030807; XX DT 14-DEC-1999 (Rel. 62, Created) DT 17-FEB-2004 (Rel. 78, Last updated, Version 5) XX DE Arabidopsis thaliana DNA, chromosome 1 between mi303 and mi259, Sp6 side of DE P1 clone Z19F, partial sequence. XX KW genome survey sequence; GSS. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. XX RN [1] RP 1-2777 RA Kato A., Komeda Y.; RT ; RL Submitted (04-AUG-1999) to the INSDC. RL Atsushi Kato, Graduate School of Science, Hokkaido University, Division of RL Biological Sciences; Kita10, Nishi8, Kitaku, Sapporo 060-0810, Japan RL (E-mail:atsushi@sci.hokudai.ac.jp, Tel:81-11-706-2740, Fax:81-11-706-4851) XX RN [2] RX DOI; 10.1016/S0378-1119(99)00403-5. RX PUBMED; 10548732. RA Kato A., Suzuki M., Kuwahara A., Ooe H., Higano-Inaba K., Komeda Y.; RT "Isolation and analysis of cDNA within a 300 kb Arabidopsis thaliana RT genomic region located around the 100 map unit of chromosome 1"; RL Gene 239(2):309-316(1999). XX DR MD5; 6eddf09a516c7228ff21e24efe691e78. XX FH Key Location/Qualifiers FH FT source 1..2777 FT /organism="Arabidopsis thaliana" FT /chromosome="chromosome 1" FT /map="between mi303 and mi259" FT /ecotype="Columbia" FT /mol_type="genomic DNA" FT /clone="P1 clone Z19F" FT /db_xref="taxon:3702" XX SQ Sequence 2777 BP; 1020 A; 592 C; 462 G; 703 T; 0 other; tctaaaatag aggagtcagc ttctctaaaa acctgcaaag aaacacgaga gcatagtgtc 60 agtggaacaa cactaaataa taaaatttgg aaataaacaa aaactgaaag aactaccatc 120 acaaggccat acatgaatct cactgagttc catctgaaca tcaagacgtg tactctcccc 180 tgtgtcttca aaagattttg atttaacact cctcagttga attcctgtaa tgttgttctc 240 agcaagaaga tcatgttctc gatttacaca tctgacatcc agtttgggta aactgaagga 300 aacctgcttg atatgaccaa actatcagta gacgttggat gaattcttct gattacacat 360 catataaaca gaggacactg aaacgtaaca acgcagtgat tatgcaaaca gaaatcatcg 420 cttgcctaca aatgagggct cacattttga tagttatgta tataggattc aaaaaaattt 480 agaaaattca ctacaacata attcaagata atcataagaa ccaactttaa ctgaaatcta 540 gaaaacctgc tatgcatatt gctaaatcta aagaaccata gggaaaatta tacagctatc 600 attggaaagg cggaaaaaag gccactgcgg aataaaccaa aggtctgtat ggcctaatct 660 atgccaaaac tatcaattat tggaatgtag agataaaaca atttcaatgg tactccacag 720 aaacagatgc gtttgagcag aggattctct aaaaggatag catctaggct gatggtatta 780 cacaagaatg tactaaaatg ttagaagttc agtagaattt ctctaagtaa attattgaaa 840 ttatcgccag caaccagctt aaagtaagaa acattgaatt aactttatat accagcgtaa 900 tcttttcaat attgcagact cacagaacgc acttgaaatc tttgggaaac aaatagttac 960 aagttaacgc aaagaaagag ccaaggcatg ttacattaag ccaactgacc ttttcaggaa 1020 aagacgaaga atactttgca agtgctgcca ccagctgatg ctctttatgg ggtttcttcg 1080 cagatgacgc agcagtagct gatgttctaa cttcgtctga ccgaagtgaa gctgatgatt 1140 gtttgctctt gggaaatgaa tcctcgtcaa aattaagaat tacatctcca gatgtaactt 1200 ccacgtttcg tacaacaatg cctactgccc taaattcagt taaaaacacc aaaagactac 1260 caacagtgag caaactactg attcagtata aatctatcat ctgtaacaga agagcacagc 1320 catcttaaag atcaccagga gtgcaaaaaa ttcctaaaac aatctacaat ttaaggagga 1380 tttacttcac ataagaatca gataccaatg acggtacctg tcatgtccaa actcggaaga 1440 aagagaaggt tcatcacaaa ataaagtagc agcggatctg tctggagagg cagaggacgc 1500 ttgggaagca ggacaacatt caaagcttac gttcgaagat tgatcagaaa ttatgcgtga 1560 ttcacataag tgaacaagaa ttggtagaac attcaactta acatatagat ttggctttgt 1620 cccaccatcc ttatttatat ccaacttcag ttccttgact tccacaatca cctttgtggt 1680 ctgcatttca cataggttgt tagaaaatgg tttccagaga agtgcctatc caagagcagt 1740 cttagaattt ggatctcaaa ccaattacct tcacaaccat atctgcgaca gaaactgaaa 1800 gaaaccttgc aacattagcc accaccatcc actttcccct gcctgaagta cgaggtttat 1860 gacttttggc tttctgtaaa tttgttgttg aagttgagga cctcatcaca acttcaagat 1920 cagatatcaa gacttgcact tttgggtctc tagaaagaaa accaacgcca agtttgacca 1980 aggattggcg taagcttagt ttaatttcac tagcggacac cgactcaatg gcaccctgaa 2040 aaaacacata aatcagcagc aaatcatcct taagggtaaa attagtcatc gcagaactca 2100 ttagcaaatt actattatcc caatagaaac acgttcaaac atgcaaaaat gactaaggga 2160 cagatgaaca tgaactccac tacattgatt atgattcaag attctacaga aacattcttt 2220 ctcagctaca tcaacgcaaa acatccactt aattgatccg attcaaactt caacagaaaa 2280 cattctaact catctacaga aaaaaaaaaa aaaaaaaaaa acattcacta tattgatcga 2340 aattcaagct tctacagaca catttgctct cagctacagg cctacatcaa ccactgtaag 2400 atgttctctc ccaagtttat aaaattctca ggtctgtaca ttgtacagta ctcacctttt 2460 taaacttcac cacaacatcc ttgaggcatt tccaaccacc aacacgaaac acaaccgatg 2520 ctcccaacac tctactaagc atccaggcaa acaacctgga acagagtctg aacacaaatt 2580 gaaactataa gctaccatct acttcgatga gctttgaaca caaatttaaa ctaatttgaa 2640 ctaagatcaa caccagagag gaggactcac atgaagatca tccacaaaac gatggaaaca 2700 atgagaaacc cgaagaagaa cttcgcaggt gaagcagcca tatccaccac cgcagagaga 2760 aaactaactc cgccgga 2777 // ID AB030808; SV 1; linear; genomic DNA; GSS; PLN; 3157 BP. XX AC AB030808; XX DT 14-DEC-1999 (Rel. 62, Created) DT 17-FEB-2004 (Rel. 78, Last updated, Version 5) XX DE Arabidopsis thaliana DNA, chromosome 1 between mi303 and mi259, T7 side of DE P1 clone Z19F, partial sequence. XX KW genome survey sequence; GSS. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. XX RN [1] RP 1-3157 RA Kato A., Komeda Y.; RT ; RL Submitted (04-AUG-1999) to the INSDC. RL Atsushi Kato, Graduate School of Science, Hokkaido University, Division of RL Biological Sciences; Kita10, Nishi8, Kitaku, Sapporo 060-0810, Japan RL (E-mail:atsushi@sci.hokudai.ac.jp, Tel:81-11-706-2740, Fax:81-11-706-4851) XX RN [2] RX DOI; 10.1016/S0378-1119(99)00403-5. RX PUBMED; 10548732. RA Kato A., Suzuki M., Kuwahara A., Ooe H., Higano-Inaba K., Komeda Y.; RT "Isolation and analysis of cDNA within a 300 kb Arabidopsis thaliana RT genomic region located around the 100 map unit of chromosome 1"; RL Gene 239(2):309-316(1999). XX DR MD5; 05297c6add1a4727aaa1f7ffdbc819ac. XX FH Key Location/Qualifiers FH FT source 1..3157 FT /organism="Arabidopsis thaliana" FT /chromosome="chromosome 1" FT /map="between mi303 and mi259" FT /ecotype="Columbia" FT /mol_type="genomic DNA" FT /clone="P1 clone Z19F" FT /db_xref="taxon:3702" XX SQ Sequence 3157 BP; 1080 A; 605 C; 511 G; 961 T; 0 other; tctcttcttg gttttgggtt ttacctgata ggcaccaata aggtggacag cgatgcaagc 60 gtttgcaaag tcaatgagcc aaaagggctc gaaaaacccg aaatctgtga ggaaatctcc 120 aggggcattg tttccaaatg cagcatagcc gatgcatcca cataagatgt agaaaaaagt 180 ggtggttgat actcccacaa gacttgctct tttcatggct ttgttctcag ctgggctaga 240 tcttagtgta tcctgcaaaa aacataaaac tttcaccgtt agtgatacaa tactccaatc 300 tttaattttg gtaaacagtt ttgaactagg tccattattt ccttgggtca gagaccagaa 360 ctaagttagt cccctcccca tcagccatca ccgatgctta aactcgggga ccttcccggc 420 tgatccacat ctcagacact ttaatccaaa aatattcttg gttaatttgt aaaactattt 480 tttatcatac tgccgctacc cggtcgacat atacacaatg gtaccaaata ccgtacatga 540 caagtcatta aatggtgaaa gctacgatca ttaagagaca aaattttatg agttgtagtg 600 tcaactcagt aagctaactc tgttgataag aatatcatat cattgtttgt tgtggagaag 660 agattgacaa tatctttgaa tgtgactctt tgtcctttat aagcacatgt tttaccttta 720 agctaaaaga cagattcttt actttttgac tcttttgggt aaagaaaaaa aaagtggtcc 780 atagggaatc gattgtcgtt gtcaataatc tctacccaca attctattaa gaggtttata 840 ttcaaagctt aaaagacttt aaaaattgac tgagataact tgcctgaatc tcgatgagaa 900 ccgtggcata agcataggcg aacgctatgt ccccaaccgc ttgaaacgat ctccatatct 960 tttgagctgc ggttacatct actccaaccg ctgtgcccgt catactcgtc ttacccactt 1020 tcccaccttt ttcatattgt aacatatgaa ccgttagttt tgtaaatggt cttatgactt 1080 ttaacagtag ataaattggt gtgcaactaa ttaatcatgt caagattgtt acaactattg 1140 aaataagagt acttaaaaaa tggcagctat gcaactaatc aaaactttta agaattgcat 1200 gtacctgcga cggttgcgat ggctagaccg attccaatag ttgcataagt aaaggacatg 1260 accgcggcca taatggaaag aaaagagagc ttgtggaaat ttgggatctg gctaagaata 1320 acctgaataa tgccaaaaac cgccatatac ggataattcg atatagtaca atccgcagtg 1380 tgccctttat cgtggaagca gttcgatttc cctaccgctc tgtttaaaca ccaaaccaac 1440 tacatcagta tttgttcata gcttatataa ctcttcttat caaattgtaa caagaaaaca 1500 atttacatta aattttgtaa cggtataaag taagaacata ttcacattgt agttgactta 1560 caccaaacta atagaagcag tgatggtgta accaacagtg accccaatca gattcccata 1620 ttgtgccact ccacagagct gcactttcct accacctgtc atatgtacaa taattgcaaa 1680 agtattattt atttattact tctgttttta agctattaat taattttctg tttcataaag 1740 aaaacacaaa acactccacg gaactatgtt ataatatatc tatttgttat atacatcaac 1800 atccaaaacc aacaataatg ctaatactac aaaaacggtt gcctcatatg tcaaaatgtt 1860 cttttttttt ctgttttcct tggttttcac aatttggctc aataaacagt ccaaaattta 1920 attagtaaat ttagtttgac aaccagctaa agatattatt gattgactaa gataaagttt 1980 cagcctaatt aattatttca acaaacatag accatagtgt ataattggga attaaatgga 2040 cggttaccaa agttttatat ctagccaaaa tatttatgtt taaaatagaa atagagcaat 2100 ttgaggcaat tacaatccac agttttttcc tctgaaattg cagggattta aaggaaacac 2160 agaaaataag aaatttccat ttattacatc ttcaattcta tccacaaaca attggttgca 2220 caaatctcta atttctaatg aaccaaacat aacatatgga gtagaatatt ttttttctta 2280 ataataatag aggccacaaa aacaaacaat ttttcccatt agatatatct ttgagaaaag 2340 atataaccaa agcatcacat tttttgtaat atcaatgagt atctcataaa caccaaactt 2400 gttgtatctc aaattgatgc aaaacaggac tgtcgctatt gatcgacatc aatctttaat 2460 aattatttaa ttttgctttt ctaacctcaa tattcttccg acagaagtca tcctaaacta 2520 aaatactaca caaagtacag tatcaaataa aacagaacca taccttaaac caaaaaaaaa 2580 gttacttttt taacaaaaat gaaaatttcg taaagaaccc tttttgacaa aaaaaataaa 2640 aaaattggtg tataaagtgt tgatttttaa aaaacaatct gtttcacaag aaaacaaaag 2700 atagagaatc ttatgaagtc atggtaataa attggtcaag aattttgtgc ttgctttatg 2760 acatatgaat ttttttcata tttttgatat tctatcaatt tactctacaa gaaaaactaa 2820 ataaagggga aaaaaatata aacataccga ggtaagatcg aacaacgtcc atgtaagtgt 2880 aattccgttt tccggtgacg ggatccggcg cacggtagca atcggcaagc atggtggagg 2940 tgaagtaagt aatgaacgag aaaatgagta agatcgatgt ccctgcgatc caaccaagct 3000 gagctatagc ccatgctaaa gacaacactc cggagcctat caccgccgtg ataatatgcg 3060 cactcgccgt aagccacgtc ccggtacgct tctctcgacc atcttcatcg acgttctttg 3120 tcgggtccga cacggtgtag gcatcgccgg attccgc 3157 // ID AB040455; SV 1; linear; genomic DNA; GSS; PLN; 373 BP. XX AC AB040455; XX DT 18-SEP-2001 (Rel. 69, Created) DT 18-SEP-2001 (Rel. 69, Last updated, Version 1) XX DE Pythium porphyrae DNA, clone:S-29. XX KW genome survey sequence; GSS. XX OS Pythium porphyrae OC Eukaryota; Sar; Stramenopiles; Oomycetes; Pythiales; Pythiaceae; Pythium. XX RN [1] RP 1-373 RA Yokoo K.; RT ; RL Submitted (22-MAR-2000) to the INSDC. RL Kazunari Yokoo, Saga Prefectural Ariake Fisheries Research And Development RL Center, Research Division; Nagata2753-2, Asikari, Saga 849-0313, Japan RL (E-mail:saarisui@orange.ocn.ne.jp, Tel:+81-0952-66-2000, RL Fax:+81-0952-66-4443) XX RN [2] RA Yokoo K.; RT "Pythium porphyrae"; RL Unpublished. XX DR MD5; d856a1a87d7ef9794f63338d59b78b0a. XX FH Key Location/Qualifiers FH FT source 1..373 FT /organism="Pythium porphyrae" FT /strain="S-2" FT /mol_type="genomic DNA" FT /clone="S-29" FT /db_xref="taxon:88834" XX SQ Sequence 373 BP; 88 A; 118 C; 92 G; 75 T; 0 other; ggtgacgcag acaagaggta caagtcctgg cccctctcgt gtcgagacgc caagacaccc 60 atgaatcgca tcaagacgca cgtgcagcag atgatctatc tgaccaatct tcaggctgtc 120 gcgtactttg aacacctcgc agacgtcgtg tacatctaca cactgcagtt tgaccagaac 180 gaggcaccaa gacacctcgg caccattcga ctccacaccg cgttccaaga gcacgtcgtg 240 ctggatgtgt gctacgtacc gagcaagcaa tggctagtgg tttcatccat gcgggtgccc 300 atggcctacc tcagtgtatg gcagattcca gacgcgtcga gccactcgca ttcccccatg 360 atgctgcgtc acc 373 // ID AB051634; SV 1; linear; genomic DNA; GSS; PLN; 660 BP. XX AC AB051634; XX DT 30-NOV-2000 (Rel. 66, Created) DT 30-NOV-2000 (Rel. 66, Last updated, Version 1) XX DE Raphanus sativus DNA, clone:OPD18/650. XX KW genome survey sequence; GSS. XX OS Raphanus sativus (radish) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus. XX RN [1] RP 1-660 RA Terachi T.; RT ; RL Submitted (24-NOV-2000) to the INSDC. RL Toru Terachi, Kyoto Sangyo Univ., Dept. Biotech., Fac. Eng.; Motoyama, RL Kamigamo, Kita-ku, Kyoto, Kyoto 603-8555, Japan RL (E-mail:terachi@cc.kyoto-su.ac.jp, Tel:75-705-1896, Fax:75-705-1914) XX RN [2] RA Terachi T., Murayama S.; RT "Identification of RAPD and AFLP markers linked to a restorer gene for RT Ogura cytoplasmic male sterility and RAPD-based linkage mapping in Radish RT (Raphanus sativus L.)"; RL Unpublished. XX DR MD5; bca7fcb04b674da7e0da0f27491c3b32. XX FH Key Location/Qualifiers FH FT source 1..660 FT /organism="Raphanus sativus" FT /cultivar="Comet" FT /mol_type="genomic DNA" FT /clone="OPD18/650" FT /db_xref="taxon:3726" XX SQ Sequence 660 BP; 147 A; 127 C; 139 G; 246 T; 1 other; gagagccaac gttcagagag gagctcctca atttttccca gagaggtcgg attcttcaga 60 tttctaattt caaggatgat tctggcccta tcggtgagtt tgtcagtcct ccattcagta 120 tttgtttgta atcaaaaaga gtgtaattgg acattctttt tgttttgtct caaaaacttg 180 ggattgttca gcttgggtac gcacatatgc attgtttctt gaggaacggc ttgaatgctt 240 cagggtttta agatatgata ctgaggctga acttcttgca aagggtaccc ctgggcagga 300 taaggtattc aaatgttcct ttttacgtct ttgagtttga acctcttttc tttttttttt 360 tgtttctgat ggtttagaga ctgtggcagg ggtacagtag aaccagggat ttagatggtg 420 aacaactctt gcttcagttg ccttctttgc agcagcttct ctatcgcctc attggttgca 480 aggttacttt ctcatcttta tttgtttgtt gctgcattta actgatcaat gaactgtctt 540 taccctttta actttctttc ttttcagcca gaagscgctg ctaaccacaa tatgttatac 600 aatatgcact cgctctggta cgtgatactg atccttgtca ttgacttaaa gttggctctc 660 // ID AB051635; SV 1; linear; genomic DNA; GSS; PLN; 590 BP. XX AC AB051635; XX DT 30-NOV-2000 (Rel. 66, Created) DT 30-NOV-2000 (Rel. 66, Last updated, Version 1) XX DE Raphanus sativus DNA, clone:OPF3/600. XX KW genome survey sequence; GSS. XX OS Raphanus sativus (radish) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus. XX RN [1] RP 1-590 RA Terachi T.; RT ; RL Submitted (24-NOV-2000) to the INSDC. RL Toru Terachi, Kyoto Sangyo Univ., Dept. Biotech., Fac. Eng.; Motoyama, RL Kamigamo, Kita-ku, Kyoto, Kyoto 603-8555, Japan RL (E-mail:terachi@cc.kyoto-su.ac.jp, Tel:75-705-1896, Fax:75-705-1914) XX RN [2] RA Terachi T., Murayama S.; RT "Identification of RAPD and AFLP markers linked to a restorer gene for RT Ogura cytoplasmic male sterility and RAPD-based linkage mapping in Radish RT (Raphanus sativus L.)"; RL Unpublished. XX DR MD5; eef2a2e11c42e1313d596a7b304c2c9b. XX FH Key Location/Qualifiers FH FT source 1..590 FT /organism="Raphanus sativus" FT /cultivar="Comet" FT /mol_type="genomic DNA" FT /clone="OPF3/600" FT /db_xref="taxon:3726" XX SQ Sequence 590 BP; 219 A; 115 C; 91 G; 163 T; 2 other; cctgatcacc tagtatcacc aaaacaaaat catgcataag tattagattt cttcaatata 60 accaaataaa tcatatcaaa gtagcatgta agattttgtc aaaaagcagc atgagctaat 120 ttttaatttt ccaagtttca ttgaatatta ataaattaat ctgagacttt tgaagtctac 180 tgaaagcttt accaaaatat ctataaattt attttcaaaa tagaaatact agagaccagt 240 agtgtcatta tcatctgcta gatattttgg tctaaactag gaaaatatcc ttattgcatn 300 tttttwaata atctaaattc caaacagcac atagcaaaag cagaacatta tcccaaaaac 360 atatgaacaa caacgcagaa gcagagcaag aagaagagtt cagtgaatgg gtagtgatac 420 aaacctcacc cacaagctca tcaatcgacg catctagccc tctaaactca ccgatatcac 480 aagcaagcca aggccatgat gatgaagatt ctgttgttcc cgtcgtagaa gaggaagatg 540 atgaaccctc ctccacgctg aatcagtcat ttccgtgttg ggtgatcagg 590 // ID AB051636; SV 1; linear; genomic DNA; GSS; PLN; 399 BP. XX AC AB051636; XX DT 30-NOV-2000 (Rel. 66, Created) DT 30-NOV-2000 (Rel. 66, Last updated, Version 1) XX DE Raphanus sativus DNA, clone:OPH11/410. XX KW genome survey sequence; GSS. XX OS Raphanus sativus (radish) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus. XX RN [1] RP 1-399 RA Terachi T.; RT ; RL Submitted (24-NOV-2000) to the INSDC. RL Toru Terachi, Kyoto Sangyo Univ., Dept. Biotech., Fac. Eng.; Motoyama, RL Kamigamo, Kita-ku, Kyoto, Kyoto 603-8555, Japan RL (E-mail:terachi@cc.kyoto-su.ac.jp, Tel:75-705-1896, Fax:75-705-1914) XX RN [2] RA Terachi T., Murayama S.; RT "Identification of RAPD and AFLP markers linked to a restorer gene for RT Ogura cytoplasmic male sterility and RAPD-based linkage mapping in Radish RT (Raphanus sativus L.)"; RL Unpublished. XX DR MD5; 6e1e58288b08cc3bef8f607d2eb11fa2. XX FH Key Location/Qualifiers FH FT source 1..399 FT /organism="Raphanus sativus" FT /cultivar="Comet" FT /mol_type="genomic DNA" FT /clone="OPH11/410" FT /db_xref="taxon:3726" XX SQ Sequence 399 BP; 105 A; 71 C; 86 G; 137 T; 0 other; cttccgcagt taagcgtgct tgggcgagag tagtactagg atgagtgacc tcccgggaag 60 tcctcgtgtt gcgccctttt ttaataaaaa acgagagaaa acccttataa aaaacgagag 120 aaaaccctag ccgtcaagag agaaaaatag agatttttta tagtttcaag ccgatgatcg 180 gaggcttctc cagctccgat atcggcttgt ttaattcgtt ttgcatctct ttcttggatc 240 tattttgttt ccagtcgctg tgtttttgcc aatttatttt gaatctgaca aggtttttta 300 gtgttctttt gtatgcttct tccaattgtt ttggaaagac aaaattttcg gttcagttga 360 actgtttaga aaagttaatt gacagatcta ctgcggaag 399 // ID AB051637; SV 1; linear; genomic DNA; GSS; PLN; 230 BP. XX AC AB051637; XX DT 30-NOV-2000 (Rel. 66, Created) DT 30-NOV-2000 (Rel. 66, Last updated, Version 1) XX DE Raphanus sativus DNA, clone:AFLP190. XX KW genome survey sequence; GSS. XX OS Raphanus sativus (radish) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus. XX RN [1] RP 1-230 RA Terachi T.; RT ; RL Submitted (24-NOV-2000) to the INSDC. RL Toru Terachi, Kyoto Sangyo Univ., Dept. Biotech., Fac. Eng.; Motoyama, RL Kamigamo, Kita-ku, Kyoto, Kyoto 603-8555, Japan RL (E-mail:terachi@cc.kyoto-su.ac.jp, Tel:75-705-1896, Fax:75-705-1914) XX RN [2] RA Terachi T., Murayama S.; RT "Identification of RAPD and AFLP markers linked to a restorer gene for RT Ogura cytoplasmic male sterility and RAPD-based linkage mapping in Radish RT (Raphanus sativus L.)"; RL Unpublished. XX DR MD5; 07ca407c11ae60f9336781de62c23e1b. XX FH Key Location/Qualifiers FH FT source 1..230 FT /organism="Raphanus sativus" FT /cultivar="Comet" FT /mol_type="genomic DNA" FT /clone="AFLP190" FT /db_xref="taxon:3726" XX SQ Sequence 230 BP; 70 A; 47 C; 63 G; 50 T; 0 other; gactgcgtac caattcaggg acagcccatt cgagagctgc gagatcattg aatgtggtgt 60 acgaatcttg acggggagcg aagaagagat gagcagtgac aggagtaata aatctggact 120 agaccaagtt tctgacagga gcgaggtctt ggaagaatct gacgacgaca gcgatcacac 180 tacagacagc tgtgtatatg tatccacaat cttgttactc aggactcatc 230 // ID AB054244; SV 1; linear; genomic DNA; GSS; PLN; 1058 BP. XX AC AB054244; XX DT 17-JUL-2001 (Rel. 68, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 3) XX DE Oryza sativa Japonica Group DNA, centromere sequence pBC1.7. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-1058 RA Nonomura K., Kurata N.; RT ; RL Submitted (16-JAN-2001) to the INSDC. RL Contact:Ken-Ichi Nonomura National Institute of Genetics, Experimental RL Farm; Yata1111, Mishima, Shizuoka 411-8540, Japan XX RN [2] RA Nonomura K., Kurata N.; RT "The centromere composition of multiple repetitive sequences on rice RT chromosome 5"; RL Unpublished. XX DR MD5; 887979e680fd46c56a2024f0718e8aa6. XX FH Key Location/Qualifiers FH FT source 1..1058 FT /organism="Oryza sativa Japonica Group" FT /chromosome="5" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone="pBC1.7" FT /note="centromere sequence pBC1.7" FT /db_xref="taxon:39947" XX SQ Sequence 1058 BP; 345 A; 195 C; 222 G; 294 T; 2 other; ccttggggta ccccgaacgc accaatacac tccaataagc ctaaaactca tgttttggtg 60 ctttttgaac tttttcattc cggtaaaaaa catcgtacac acgtgtgcca atattggcat 120 tagtggtgcg cgcgagtatt cgctcataac ccttctaaca tgtttttaat attttttatg 180 cgagttggtg ggcccgtgag aaagtttgcg ttgcgcgcaa accgcttata agtgttttta 240 cgcatatgag aatattttgg caccgttggt tacaggaaga tttttttaat gagcgtgtag 300 acccgtggaa aagtccgtgg tgcgtgtata aaattgctaa gacctctcat aattgttatt 360 ggaatatggg aatggtttgg tataactgat tgaaaaaaaa aacgagatgt tagacacaaa 420 agaatgttta ggatgcgcgc atggaatcgc tcgaaacacc tgatacgtgt ttttcttata 480 taaaatgttt tgataccatt gattgtgaaa aatatatttg acacgtaaaa gcatggacta 540 ttcaatggaa aaacaatggc acaaattatt cccgtgcaat gggccagaat gtacacagaa 600 agaagccaat aaatcaaaag gttaatggga cttccaattt cagggggcca gggtaagctt 660 ttccaggtaa ttacacttgg caaagaatct gaatgaattc cagcacactg gcggccgtta 720 caagtggatc cgagctcggg ntttttctac ctgtaagctt cttgtccaca aagaacacaa 780 ccaagtttac cgtatacctg agcaaggaat atgcattaaa acaaggagca agaggcacag 840 caaataaata aatgataatg acatactacn caccatgcaa caacaacatc aacactgtaa 900 tgcttgcgag aggctatgat aagaagactc tgagcaatag ctatgcacca tgcaagcatc 960 tttataaacc tgaaatgagt tttgaaaaaa atacagaatc ttagattgtt gtatttccta 1020 gacagactga atttctcgca agaattcctg tgagggat 1058 // ID AB054245; SV 1; linear; genomic DNA; GSS; PLN; 1928 BP. XX AC AB054245; XX DT 17-JUL-2001 (Rel. 68, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 3) XX DE Oryza sativa Japonica Group DNA, centromere sequence pH3.5. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-1928 RA Nonomura K., Kurata N.; RT ; RL Submitted (16-JAN-2001) to the INSDC. RL Contact:Ken-Ichi Nonomura National Institute of Genetics, Experimental RL Farm; Yata1111, Mishima, Shizuoka 411-8540, Japan XX RN [2] RA Nonomura K., Kurata N.; RT "The centromere composition of multiple repetitive sequences on rice RT chromosome 5"; RL Unpublished. XX DR MD5; 03cdc332b70310d23245a3f99d01d70d. XX FH Key Location/Qualifiers FH FT source 1..1928 FT /organism="Oryza sativa Japonica Group" FT /chromosome="5" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone="pH3.5" FT /note="centromere sequence pH3.5" FT /db_xref="taxon:39947" XX SQ Sequence 1928 BP; 531 A; 453 C; 390 G; 543 T; 11 other; aagctttttc attccggtta aaaacaacgc acgcacatgt gccaatatcg gcattaattg 60 acaaaagttc gccgcgcgag ccacgaagga gtttttgcca cgaacgcacc caatacactc 120 taatatgtcc aaaaatcatg tttttggtgc ttttctaact ttttcattcc gttatataac 180 gtcgcaccta cgtgtgccaa tatcggcatt aattgacaaa agttcgccgc acgagtcacg 240 gagtgagttt ttgtcacgaa cacacgcaat accctccaat atgtcaaaaa atcaagtttt 300 tctcctttta gaactttttc attccggtta aaaaacaacg cacgcacgtg tgccaatatc 360 ggcattaatt gacaaaagtt cgccgcgcga gtcacgaagg cttttttgcc tcgaacacac 420 ccaatacact ccaatatgtc caaaaataat gtttttctgc tttttgagct gtttcgntcc 480 ggttaaaaac aacgcacgcg tgtgtgccaa tatcggngaa cgcaccaata cactccaata 540 tgtccaaaaa tcatgttttt ggtgcttttc taactttttc attccgttat ataacgtcgc 600 acctacgtgt gccaatatcg gcattaattg acaaaagttc gccgcgcgag tcacgaagga 660 gtttttgcca cgaacgcacc cagtagactc cgttatgtcc aaaaattgat tcactcagtc 720 tctctaagtg tattgttgac ggcccttaaa tcataatatc tgaccgtcaa tacctgcata 780 taatgaaata aaacatggta tccaacttag tggtagggat tatttctaat catttccact 840 agtgttggtg aaatatatgt atgtaggtgt aatttgtgga gaaaactcat ccgtcatgtg 900 acaaaatgca cctccgcgca ttcaggacgc gtttacacgg attagatgat gtgaccatgg 960 ctaccacgga tgcaaccatt gctcacatca tggatgaaca agaagatatc gagatcaagt 1020 actccaagtg ctggaatccg attcggccac ctactacact gctgacttca aacggccacc 1080 gaatctgcat acgacctccg ttttcggccc gtgagtactt gatggaaagc tctcggagcc 1140 ctctttctaa cggatccagc ctcttctctg aattctatct cgtgtggcca gaatcacagg 1200 aacaaggtgt tgcatcacct ataatgggcc tatgggcttg taacttcatt tgggaccccg 1260 gcccaggtgg ggcccatgtg gggtgcgccc caagctggtg gagcacgacc ctaggcaccc 1320 ctaggtcgtc ctcccacccc tatatatagc tagttacccc ttcagggttt ctcgggtttt 1380 gttagattaa agtttagcca ttgctacttg cttgcagcgc gcgtgtcggc tagaccgtcc 1440 gtctgcttgt tcttcggaac cccaactnat catttgnnga aaaaaaaagc cgcaccaaaa 1500 nnaanacagn aaagaaaagg aaagaaanaa anaaagaaaa gaagaaagaa gaaagaaaga 1560 aaagagaaaa tactgttatg tttgagctga acttcatata tcagagttgt gcatgagttg 1620 ttcctagtgc tatcttgtgg tatcgtttgt gtctaggctc gcgtctctag tacgttctag 1680 cctaggacca gcacggtact tgactttgaa caattattca actttgcatt atctgatttg 1740 agcatttgct attcctttgc tacatattta agcctaccca gagctccaca tatttgatta 1800 cagctgtacc gcaagtgttt gccaaggcat cgatacatcc aaccttcatt ggggtgcttg 1860 gttgagtcgg tgtatgtcac cattccactt gcattggtaa gatcttgtaa gagcttggtt 1920 aaaagctt 1928 // ID AB054246; SV 1; linear; genomic DNA; GSS; PLN; 607 BP. XX AC AB054246; XX DT 17-JUL-2001 (Rel. 68, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 4) XX DE Oryza sativa Japonica Group DNA, clone:Y1263L, the end sequence of YAC DE clone. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-607 RA Nonomura K., Kurata N.; RT ; RL Submitted (16-JAN-2001) to the INSDC. RL Contact:Ken-Ichi Nonomura National Institute of Genetics, Experimental RL Farm; Yata1111, Mishima, Shizuoka 411-8540, Japan XX RN [2] RX DOI; 10.1007/s004120100148. RX PUBMED; 11534820. RA Nonomura K., Kurata N.; RT "The centromere composition of multiple repetitive sequences on rice RT chromosome 5"; RL Chromosoma 110(4):284-291(2001). XX RN [3] RX DOI; 10.1007/BF01682091. RX AGRICOLA; IND20527908. RA Umehara Y., Inagaki A., Tanoue H., Yasukochi Y., Nagamura Y., Saji S., RA Otsuki Y., Fujimura T., Kurata N., Minobe Y.; RT "Construction and characterization of a rice YAC library for physical RT mapping"; RL Mol. Breed. 1(1):79-89(1995). XX DR MD5; 6707e8511bac7ac0da7821ea2ed70d52. XX FH Key Location/Qualifiers FH FT source 1..607 FT /organism="Oryza sativa Japonica Group" FT /chromosome="5" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="pYAC4 rice genomic DNA" FT /clone="Y1263L" FT /note="the end sequence of YAC clone Y1263" FT /db_xref="taxon:39947" XX SQ Sequence 607 BP; 168 A; 116 C; 141 G; 182 T; 0 other; aattcgaggg acttaggatc tgagggagtc aggatcgtaa caattgggat cattttttcc 60 atcgaactcg aaggcggtac gagacctctc cttgatgggc gccagtcggc ttttgataaa 120 gcgctgagtg atttgctccc cttgcagacc ttgctccttg agcttcagca gacgatttaa 180 caaggtgagg gcttgagcgg cttcatctcc cattgaaagt gagttccatg tttcctgata 240 ttttggggga agacaagagt actcgggaag cgccggttca ggattttgga gatagaacca 300 gtttgcgtgc caacccttgt tggatgtttt aaaaggcatg gagaagtatt tttggctcaa 360 ggtaccccgt agttggaaac ctgctccccc gataacacat tgcaaccccc atcgtttggc 420 tttatccata ataagccaaa acggcttatt aggaaataca aatgaatttg taggtaaaac 480 ttttatatgt gttcttggtg atttaaaaac caatgttgtt aaagaaacta cgttgaaaat 540 atctcaaaat caatcccaaa attaagtttg aaaattttaa aattggctta ttctttggct 600 gtttagg 607 // ID AB054247; SV 1; linear; genomic DNA; GSS; PLN; 119 BP. XX AC AB054247; XX DT 17-JUL-2001 (Rel. 68, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 4) XX DE Oryza sativa Japonica Group DNA, clone:Y3173L, the end sequence of YAC DE clone. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-119 RA Nonomura K., Kurata N.; RT ; RL Submitted (16-JAN-2001) to the INSDC. RL Contact:Ken-Ichi Nonomura National Institute of Genetics, Experimental RL Farm; Yata1111, Mishima, Shizuoka 411-8540, Japan XX RN [2] RX DOI; 10.1007/s004120100148. RX PUBMED; 11534820. RA Nonomura K., Kurata N.; RT "The centromere composition of multiple repetitive sequences on rice RT chromosome 5"; RL Chromosoma 110(4):284-291(2001). XX RN [3] RX DOI; 10.1007/BF01682091. RX AGRICOLA; IND20527908. RA Umehara Y., Inagaki A., Tanoue H., Yasukochi Y., Nagamura Y., Saji S., RA Otsuki Y., Fujimura T., Kurata N., Minobe Y.; RT "Construction and characterization of a rice YAC library for physical RT mapping"; RL Mol. Breed. 1(1):79-89(1995). XX DR MD5; b04ca8d09a65616396c1d979ce1591d4. XX FH Key Location/Qualifiers FH FT source 1..119 FT /organism="Oryza sativa Japonica Group" FT /chromosome="5" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="pYAC4 rice genomic DNA" FT /clone="Y3173L" FT /note="the end sequence of YAC clone" FT /db_xref="taxon:39947" XX SQ Sequence 119 BP; 34 A; 23 C; 28 G; 34 T; 0 other; aattcataca gtccatatcg cgtagtgaat gcggtcttcg gaatatcttc ttcacgaata 60 cgtaattggt gatatccgga acggagatca atcttggaga atacggtggc acctttaag 119 // ID AB054248; SV 1; linear; genomic DNA; GSS; PLN; 103 BP. XX AC AB054248; XX DT 17-JUL-2001 (Rel. 68, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 4) XX DE Oryza sativa Japonica Group DNA, clone:Y3173R, the end sequence of YAC DE clone. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-103 RA Nonomura K., Kurata N.; RT ; RL Submitted (16-JAN-2001) to the INSDC. RL Contact:Ken-Ichi Nonomura National Institute of Genetics, Experimental RL Farm; Yata1111, Mishima, Shizuoka 411-8540, Japan XX RN [2] RX DOI; 10.1007/s004120100148. RX PUBMED; 11534820. RA Nonomura K., Kurata N.; RT "The centromere composition of multiple repetitive sequences on rice RT chromosome 5"; RL Chromosoma 110(4):284-291(2001). XX RN [3] RX DOI; 10.1007/BF01682091. RX AGRICOLA; IND20527908. RA Umehara Y., Inagaki A., Tanoue H., Yasukochi Y., Nagamura Y., Saji S., RA Otsuki Y., Fujimura T., Kurata N., Minobe Y.; RT "Construction and characterization of a rice YAC library for physical RT mapping"; RL Mol. Breed. 1(1):79-89(1995). XX DR MD5; 7fb9b539eb1492fc446401269c9da4be. XX FH Key Location/Qualifiers FH FT source 1..103 FT /organism="Oryza sativa Japonica Group" FT /chromosome="5" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="pYAC4 rice genomic DNA" FT /clone="Y3173R" FT /note="the end sequence of YAC clone" FT /db_xref="taxon:39947" XX SQ Sequence 103 BP; 24 A; 24 C; 17 G; 38 T; 0 other; cattcagatt ctttgccaaa tgtaattacc tggaaaagct taccctggcc ccctgaaatt 60 ggaagtccca ttaacctttt gatttattgg cttctttctg tgt 103 // ID AB054249; SV 1; linear; genomic DNA; GSS; PLN; 71 BP. XX AC AB054249; XX DT 17-JUL-2001 (Rel. 68, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 4) XX DE Oryza sativa Japonica Group DNA, clone:Y3559L, the end sequence of YAC DE clone. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-71 RA Nonomura K., Kurata N.; RT ; RL Submitted (16-JAN-2001) to the INSDC. RL Contact:Ken-Ichi Nonomura National Institute of Genetics, Experimental RL Farm; Yata1111, Mishima, Shizuoka 411-8540, Japan XX RN [2] RX DOI; 10.1007/s004120100148. RX PUBMED; 11534820. RA Nonomura K., Kurata N.; RT "The centromere composition of multiple repetitive sequences on rice RT chromosome 5"; RL Chromosoma 110(4):284-291(2001). XX RN [3] RX DOI; 10.1007/BF01682091. RX AGRICOLA; IND20527908. RA Umehara Y., Inagaki A., Tanoue H., Yasukochi Y., Nagamura Y., Saji S., RA Otsuki Y., Fujimura T., Kurata N., Minobe Y.; RT "Construction and characterization of a rice YAC library for physical RT mapping"; RL Mol. Breed. 1(1):79-89(1995). XX DR MD5; 4a52e5a705dd4a460f36a336470b9f52. XX FH Key Location/Qualifiers FH FT source 1..71 FT /organism="Oryza sativa Japonica Group" FT /chromosome="5" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="pYAC4 rice genomic DNA" FT /clone="Y3559L" FT /note="the end sequence of YAC clone" FT /db_xref="taxon:39947" XX SQ Sequence 71 BP; 19 A; 17 C; 14 G; 21 T; 0 other; acttcatgga aagcttatca agtctacttt caaatggatc cagccacatg tccatatctg 60 ttctggagcg g 71 // ID AB054250; SV 1; linear; genomic DNA; GSS; PLN; 471 BP. XX AC AB054250; XX DT 17-JUL-2001 (Rel. 68, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 4) XX DE Oryza sativa Japonica Group DNA, clone:Y3559R, the end sequence of YAC DE clone. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-471 RA Nonomura K., Kurata N.; RT ; RL Submitted (16-JAN-2001) to the INSDC. RL Contact:Ken-Ichi Nonomura National Institute of Genetics, Experimental RL Farm; Yata1111, Mishima, Shizuoka 411-8540, Japan XX RN [2] RX DOI; 10.1007/s004120100148. RX PUBMED; 11534820. RA Nonomura K., Kurata N.; RT "The centromere composition of multiple repetitive sequences on rice RT chromosome 5"; RL Chromosoma 110(4):284-291(2001). XX RN [3] RX DOI; 10.1007/BF01682091. RX AGRICOLA; IND20527908. RA Umehara Y., Inagaki A., Tanoue H., Yasukochi Y., Nagamura Y., Saji S., RA Otsuki Y., Fujimura T., Kurata N., Minobe Y.; RT "Construction and characterization of a rice YAC library for physical RT mapping"; RL Mol. Breed. 1(1):79-89(1995). XX DR MD5; ad672727342fa8aba057fd8112ac804e. XX FH Key Location/Qualifiers FH FT source 1..471 FT /organism="Oryza sativa Japonica Group" FT /chromosome="5" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="pYAC4 rice genomic DNA" FT /clone="Y3559R" FT /note="the end sequence of YAC clone" FT /db_xref="taxon:39947" XX SQ Sequence 471 BP; 124 A; 108 C; 122 G; 117 T; 0 other; catcattctg ttaacaaccg aatttggtaa catcagcgtc ggaggtgaag atgggatcaa 60 agcggagtcg gagataagga ttgttgcagc aacagagtaa gaatcggctg gagtccaaat 120 cggctacgac tagaatcggc taaatctgaa tgagactggg ttaggtgata caaccgattc 180 cggcaatacg acttggtgta caacatcggg ttgagtcgat atgcttcaag atgattgccg 240 cacttggaca gagtcctgag aaggcaattg tgttttctgt gcaggtccac ttgccttctc 300 aggactctat ccaagtgcgg caatcatctt gaagcatatc gactcaaccc gatgctgtac 360 accaagtcgt attgccgggt gggatctccc aggcctcgtg ttttctgtca acacgctttt 420 ggcacgcctg gtgggacaac taagaaatta gccaacaatc ctccctcatg g 471 // ID AB054251; SV 1; linear; genomic DNA; GSS; PLN; 319 BP. XX AC AB054251; XX DT 17-JUL-2001 (Rel. 68, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 4) XX DE Oryza sativa Japonica Group DNA, clone:Y4960L, the end sequence of YAC DE clone. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-319 RA Nonomura K., Kurata N.; RT ; RL Submitted (16-JAN-2001) to the INSDC. RL Contact:Ken-Ichi Nonomura National Institute of Genetics, Experimental RL Farm; Yata1111, Mishima, Shizuoka 411-8540, Japan XX RN [2] RX DOI; 10.1007/s004120100148. RX PUBMED; 11534820. RA Nonomura K., Kurata N.; RT "The centromere composition of multiple repetitive sequences on rice RT chromosome 5"; RL Chromosoma 110(4):284-291(2001). XX RN [3] RX DOI; 10.1007/BF01682091. RX AGRICOLA; IND20527908. RA Umehara Y., Inagaki A., Tanoue H., Yasukochi Y., Nagamura Y., Saji S., RA Otsuki Y., Fujimura T., Kurata N., Minobe Y.; RT "Construction and characterization of a rice YAC library for physical RT mapping"; RL Mol. Breed. 1(1):79-89(1995). XX DR MD5; d1e4be972992482c6d1eff2a8962da64. XX FH Key Location/Qualifiers FH FT source 1..319 FT /organism="Oryza sativa Japonica Group" FT /chromosome="5" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="pYAC4 rice genomic DNA" FT /clone="Y4960L" FT /note="the end sequence of YAC clone" FT /db_xref="taxon:39947" XX SQ Sequence 319 BP; 86 A; 75 C; 56 G; 102 T; 0 other; tacatattgt cgttagaacg cgtaatacga ctcactatag ggagtcatga tcttgattta 60 ctggacccaa tctttgatga acagaaactc ttgtctgtct tagccgatcg cccctattat 120 gtgatcggct tgagttctcg gcgatatcac tacacgcagg gcagttttca atagatggca 180 acctcatacc ttcattccag caaaatctaa agaactgaca accccaatga ggatcaaaac 240 catcatcgta tttctcatga tgcttctcct gctgcttgtc atacttcttc tgatatttgt 300 tgataatctt agctgaatt 319 // ID AB054252; SV 1; linear; genomic DNA; GSS; PLN; 103 BP. XX AC AB054252; XX DT 17-JUL-2001 (Rel. 68, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 4) XX DE Oryza sativa Japonica Group DNA, clone:Y4960R, the end sequence of YAC DE clone. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-103 RA Nonomura K., Kurata N.; RT ; RL Submitted (16-JAN-2001) to the INSDC. RL Contact:Ken-Ichi Nonomura National Institute of Genetics, Experimental RL Farm; Yata1111, Mishima, Shizuoka 411-8540, Japan XX RN [2] RX DOI; 10.1007/s004120100148. RX PUBMED; 11534820. RA Nonomura K., Kurata N.; RT "The centromere composition of multiple repetitive sequences on rice RT chromosome 5"; RL Chromosoma 110(4):284-291(2001). XX RN [3] RX DOI; 10.1007/BF01682091. RX AGRICOLA; IND20527908. RA Umehara Y., Inagaki A., Tanoue H., Yasukochi Y., Nagamura Y., Saji S., RA Otsuki Y., Fujimura T., Kurata N., Minobe Y.; RT "Construction and characterization of a rice YAC library for physical RT mapping"; RL Mol. Breed. 1(1):79-89(1995). XX DR MD5; f41e7686b8c90653414cbe98f7f098f3. XX FH Key Location/Qualifiers FH FT source 1..103 FT /organism="Oryza sativa Japonica Group" FT /chromosome="5" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="pYAC4 rice genomic DNA" FT /clone="Y4960R" FT /note="the end sequence of YAC clone" FT /db_xref="taxon:39947" XX SQ Sequence 103 BP; 23 A; 24 C; 18 G; 38 T; 0 other; cattcagatt ctttgccaag tgtaattacc tggaaaagct taccctggcc ccctgaaatt 60 ggaagtccca ttaacctttt gatttattgg cttctttctg tgt 103 // ID AB054253; SV 1; linear; genomic DNA; GSS; PLN; 61 BP. XX AC AB054253; XX DT 17-JUL-2001 (Rel. 68, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 4) XX DE Oryza sativa Japonica Group DNA, clone:Y6514L, the end sequence of YAC DE clone. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-61 RA Nonomura K., Kurata N.; RT ; RL Submitted (16-JAN-2001) to the INSDC. RL Contact:Ken-Ichi Nonomura National Institute of Genetics, Experimental RL Farm; Yata1111, Mishima, Shizuoka 411-8540, Japan XX RN [2] RX DOI; 10.1007/s004120100148. RX PUBMED; 11534820. RA Nonomura K., Kurata N.; RT "The centromere composition of multiple repetitive sequences on rice RT chromosome 5"; RL Chromosoma 110(4):284-291(2001). XX RN [3] RX DOI; 10.1007/BF01682091. RX AGRICOLA; IND20527908. RA Umehara Y., Inagaki A., Tanoue H., Yasukochi Y., Nagamura Y., Saji S., RA Otsuki Y., Fujimura T., Kurata N., Minobe Y.; RT "Construction and characterization of a rice YAC library for physical RT mapping"; RL Mol. Breed. 1(1):79-89(1995). XX DR MD5; f88fec0b8f83cd74a7449d6077017543. XX FH Key Location/Qualifiers FH FT source 1..61 FT /organism="Oryza sativa Japonica Group" FT /chromosome="5" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="pYAC4 rice genomic DNA" FT /clone="Y6514L" FT /note="the end sequence of YAC clone" FT /db_xref="taxon:39947" XX SQ Sequence 61 BP; 18 A; 12 C; 17 G; 14 T; 0 other; cggccgctcc agaacagata tggacatgtg gctggatcca tttgaaagta gacttgataa 60 g 61 // ID AB054254; SV 1; linear; genomic DNA; GSS; PLN; 204 BP. XX AC AB054254; XX DT 17-JUL-2001 (Rel. 68, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 4) XX DE Oryza sativa Japonica Group DNA, clone:Y6514R, the end sequence of YAC DE clone. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-204 RA Nonomura K., Kurata N.; RT ; RL Submitted (16-JAN-2001) to the INSDC. RL Contact:Ken-Ichi Nonomura National Institute of Genetics, Experimental RL Farm; Yata1111, Mishima, Shizuoka 411-8540, Japan XX RN [2] RX DOI; 10.1007/s004120100148. RX PUBMED; 11534820. RA Nonomura K., Kurata N.; RT "The centromere composition of multiple repetitive sequences on rice RT chromosome 5"; RL Chromosoma 110(4):284-291(2001). XX RN [3] RX DOI; 10.1007/BF01682091. RX AGRICOLA; IND20527908. RA Umehara Y., Inagaki A., Tanoue H., Yasukochi Y., Nagamura Y., Saji S., RA Otsuki Y., Fujimura T., Kurata N., Minobe Y.; RT "Construction and characterization of a rice YAC library for physical RT mapping"; RL Mol. Breed. 1(1):79-89(1995). XX DR MD5; 1564239189abef464edf8088458bbbc1. XX FH Key Location/Qualifiers FH FT source 1..204 FT /organism="Oryza sativa Japonica Group" FT /chromosome="5" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="pYAC4 rice genomic DNA" FT /clone="Y6514R" FT /note="the end sequence of YAC clone" FT /db_xref="taxon:39947" XX SQ Sequence 204 BP; 40 A; 48 C; 66 G; 50 T; 0 other; cgcgtcgtgc gctgagtttg tgctcatgca tggcgtgagc cgggacgtgc ggatcgtgcg 60 agcaaaggcc ggggaaggag ttcgtgctcc atttgtgcgt caccctgggc ctatataagc 120 acatgttcat cctgttgttg atcaccgagt gaaaatagag aaaagccggc attcgttgcc 180 agggcgttcg ttgccattgt caag 204 // ID AB056662; SV 1; linear; genomic DNA; GSS; PLN; 1941 BP. XX AC AB056662; XX DT 10-MAR-2001 (Rel. 67, Created) DT 15-JUN-2005 (Rel. 84, Last updated, Version 3) XX DE Pisum sativum DNA, clone:DskPis24. XX KW genome survey sequence; GSS. XX OS Pisum sativum (pea) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; OC NPAAA clade; Hologalegina; IRL clade; Fabeae; Pisum. XX RN [1] RP 1-1941 RA Abe S., Sugawara T.; RT ; RL Submitted (05-MAR-2001) to the INSDC. RL Shunnosuke Abe, Ehime University, Faculty of Agriculture, Department of RL Biological Resources, Laboratory of Molecular Cell Biology; Tarumi 3-5-7, RL Matsuyama, Ehime, 790-8566, Japan (E-mail:abe@mcb.agr.ehime-u.ac.jp, RL URL:http://web-mcb.agr.ehime-u.ac.jp/bunnshi, Tel:81-89-946-9853, RL Fax:81-89-946-9853) XX RN [2] RA Abe S., Sugawara T.; RT "Structure of genes encoding apyrase and pis24 repeated sequence in strains RT of Pisum Sativum"; RL Unpublished. XX RN [3] RA Abe S., Sugawara T.; RT "5' upstream sequence of pis24 repeated sequence in a field pea variety RT (Pisum sativum var kinusaya)"; RL Unpublished. XX DR MD5; 9790b9fb129466d0ba2ecc706f7c8692. XX FH Key Location/Qualifiers FH FT source 1..1941 FT /organism="Pisum sativum" FT /cultivar="denkousanjuunichikinusaya" FT /mol_type="genomic DNA" FT /dev_stage="seedling" FT /clone="DskPis24" FT /tissue_type="root" FT /db_xref="taxon:3888" XX SQ Sequence 1941 BP; 555 A; 414 C; 371 G; 601 T; 0 other; gctcccatct attgaactcg ctctttttga tcaaacgaag cacctcatct acatcgttag 60 gctttaaacc gctggattca ccagactaac actttggaac actagcaaaa tctaccacag 120 gccatcaacc ttcttgctaa tagatatatc ctccacattc tttgggaaca ccggcccaaa 180 aactcgacca ctacgcgtca ccttagtaac atcagctatg ctaacaacag aacatggtcg 240 taggtaaagg aacctcttga ccattctcta gcatggtaac attgtactga tatgcgacag 300 ccttatcaga tgcctacagg acgggggccg ctaaccgtat aaccaacggc gataccgatc 360 tgttgttgac gctgttacta ttgttgctgt tatactggat cactactctt tcattatttt 420 tggatactag gactataaca ttcacatttt catctatatc acgggactgg aaaatctgaa 480 tcaaaccttc atccatcaac ctttggatgt ctctcttcac aaccatacaa cctctgggat 540 tgacactgca aattgcacaa ccatcatttt catgctcaca atcgcttacc aaacaaatat 600 ccttgtgcat catccaccaa ggaccttcta ataaagcgga cataaaatac cttgaactct 660 ctaggacagc catccttcat agcttaaaag gaaacctact ttggcagcaa ctgaatacaa 720 tatatatgca gtaagatact ttacgtcgga ccgtcccagg acccatcgct ttactagcta 780 tgactcaatt caagggagca ttctcgaatc atgccgggat ctcttcctga aaagcacagc 840 gaagtccggt tatactacca tgaaggggtt catggtttta ggtgggtttc ttggttgcaa 900 caggttcttg agaaccaaca atgggacaat tctgcgtatg ttataggaat cgggtcgaaa 960 gagaccttct tcctctcaaa gttttgttgt tgttgttgat gattaatggt tttgttgttg 1020 ttgtaggcat ttggtcgttg atgtagttgt tgttgttgac gttgttgttg ttgaattggt 1080 gttaactgat tgttagaaaa tattgggatc acaaatgata cttgatgatg gtgttgcctg 1140 ggtggttgat ttcttctttc ttacatgagg ccctctttcc ctcccaacgg acactacatt 1200 attctctgct tccttcttct taccaaatct attaccatac ctcttgctgg gtgacgcttc 1260 ctccttagat aaacatccct ctcggacacc tcttctagct gttagtgtaa gccctagagg 1320 ctaatacttt tggcacttat atcagagtta tttattaata ataaaaggcc tttttattta 1380 ttatgtttgt ttaataaagt ccctagaata gctagttcgt ttaatgtatc aagtgcgact 1440 taatcatgag atcacattaa acataaggac actattctta aagtatctgt agtcgagctt 1500 tattgagaag tgggataaca ttaaacgatt aagactacta tgtatataga ctgatgatca 1560 catctcatgg atcatggata aaggagttat caagtcttaa acataggtat gaatattaag 1620 agtaatattt atactggttt gacccgctat gagaataata tatatagaat gttatgcaaa 1680 gtgtcataag ttattctcat agtgataatg gtgtacacca cccttcaacc gaaaaccact 1740 atggacccct agatgtagag tcgagtggct tattgctgat caaacattgt ccgtaactgg 1800 atgaccataa agacagttga tgggtactcc acgaggcatg ctgaggcaca tgagtgacct 1860 agatggaatt tgcccatcat gcgtaacagg ataaatgtct atgggcccca atattgaact 1920 ggacaagtct gacacgtggt g 1941 // ID AB069714; SV 1; linear; genomic DNA; GSS; PLN; 1202 BP. XX AC AB069714; XX DT 08-DEC-2001 (Rel. 70, Created) DT 26-NOV-2003 (Rel. 77, Last updated, Version 2) XX DE Marchantia polymorpha DNA, Y chromosome-linked fragment, clone:rbm27. XX KW genome survey sequence; GSS. XX OS Marchantia polymorpha (liverwort) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Marchantiophyta; OC Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia. XX RN [1] RP 1-1202 RA Fujisawa M., Hayashi K., Nishio T., Bando T., Okada S., Yamato K.T., RA Fukuzawa H., Ohyama K.; RT ; RL Submitted (08-AUG-2001) to the INSDC. RL Katsuyuki T. Yamato, Graduate School of Biostudies, Kyoto University, RL Division of Integrated Life Science; Kitashirakawa Oiwake-cho, Sakyo-ku, RL Kyoto, Kyoto 606-8502, Japan (E-mail:kyamato@lif.kyoto-u.ac.jp, RL Tel:+81-75-753-6453, Fax:+81-75-753-6127) XX RN [2] RX PUBMED; 11729146. RA Fujisawa M., Hayashi K., Nishio T., Bando T., Okada S., Yamato K.T., RA Fukuzawa H., Ohyama K.; RT "Isolation of X and Y chromosome-specific DNA markers from a liverwort, RT Marchantia polymorpha, by representational difference analysis"; RL Genetics 159(3):981-985(2001). XX DR MD5; 08770dedec7e933b0ceb3301c730dcaf. DR EuropePMC; PMC3497718; 23166593. XX FH Key Location/Qualifiers FH FT source 1..1202 FT /organism="Marchantia polymorpha" FT /chromosome="Y" FT /mol_type="genomic DNA" FT /clone="rbm27" FT /note="Y chromosome-linked genomic DNA fragment isolated by FT representational difference analysis" FT /db_xref="taxon:3197" XX SQ Sequence 1202 BP; 339 A; 195 C; 294 G; 374 T; 0 other; ggatccttca aaggccttcg ggaagctgaa atgcatatga aacttttgca acagcgactt 60 ccatcaaagt tcttgtgatg cgtttctaaa tcatctccaa ctctcttgag ataacagtag 120 ttttggagag ccgacatatt gtgtcaatgt actgatagcc cgttcagttg agttgaagag 180 tggttgtata tatgaagctt ttcctatcgg agcacttgtc aaatagcaaa ctgccattca 240 ttcttccctg aaaatagctt agagatattt tgagttgaag taggtatttt acctatggag 300 catattcttt gttttttttc ctgttcaaga cgctggtttg ttcaatcagc tccttgtgaa 360 tttgtaaggt ctgcagatat ggaacaggat aggcaaataa ccttcagctt tacatgagca 420 gccttccttg cccaagtgcg ggcagaatca agtgggattc agccatatag ttacactttc 480 aatgtggttg tatgcaagag gaagtagttg cttgaaggct atattgcagg cacctgttag 540 tgatagagag gttgtataac aacaggtaga gatagggagg ttgtatcttc agactaatca 600 aatgtgatga tggtttagat cacaagaagc acaatgagtt ccctgcccat cttttgtaga 660 aaattgtttg aggttgtgaa cagtgcttaa aaacctgaat attcagagaa actggtttag 720 ctattcatag agtgatgtgg taagttcctt gtacttatct tttttgaatt gataagctgt 780 gagagagatt ttttttaggg tttcagaagt ataagaacct catctgaaga gaccaggaat 840 ttgcatccgg tctcaccgac tatagttgta aggtttgaag tggagtagat aggatttagt 900 tacatttcct gttccaactc atagtataag gtggaggatc gaccgcacaa aagaatactg 960 agttaaaata gtcaatgaat tgatgaccat ctcactgcta ggggcgtgag agaagaagat 1020 aagaagcaag acaagcgggt gaacttctgc gctacatgtg aacctggagt aggaaggtga 1080 tagcgggcga tgaagatcaa atcgggatcg cgatgcgatg tccagtgtgt attgtcttgt 1140 tttgtgctgt gtttatttaa gactagagag tcgttgctag ctgcttgcat gtgtttggat 1200 cc 1202 // ID AB069715; SV 1; linear; genomic DNA; GSS; PLN; 2444 BP. XX AC AB069715; XX DT 08-DEC-2001 (Rel. 70, Created) DT 26-NOV-2003 (Rel. 77, Last updated, Version 2) XX DE Marchantia polymorpha DNA, X chromosome-linked fragment, clone:rbf62. XX KW genome survey sequence; GSS. XX OS Marchantia polymorpha (liverwort) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Marchantiophyta; OC Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia. XX RN [1] RP 1-2444 RA Fujisawa M., Hayashi K., Nishio T., Bando T., Okada S., Yamato K.T., RA Fukuzawa H., Ohyama K.; RT ; RL Submitted (08-AUG-2001) to the INSDC. RL Katsuyuki T. Yamato, Graduate School of Biostudies, Kyoto University, RL Division of Integrated Life Science; Kitashirakawa Oiwake-cho, Sakyo-ku, RL Kyoto, Kyoto 606-8502, Japan (E-mail:kyamato@lif.kyoto-u.ac.jp, RL Tel:+81-75-753-6453, Fax:+81-75-753-6127) XX RN [2] RX PUBMED; 11729146. RA Fujisawa M., Hayashi K., Nishio T., Bando T., Okada S., Yamato K.T., RA Fukuzawa H., Ohyama K.; RT "Isolation of X and Y chromosome-specific DNA markers from a liverwort, RT Marchantia polymorpha, by representational difference analysis"; RL Genetics 159(3):981-985(2001). XX DR MD5; 242d51197db8003a8d984431b2813845. XX FH Key Location/Qualifiers FH FT source 1..2444 FT /organism="Marchantia polymorpha" FT /chromosome="X" FT /mol_type="genomic DNA" FT /clone="rbf62" FT /note="X chromosome-linked genomic DNA fragment isolated by FT representational difference analysis" FT /db_xref="taxon:3197" XX SQ Sequence 2444 BP; 720 A; 496 C; 665 G; 563 T; 0 other; ggatccaatt acccacaatt gggaagattt gacacttagc ttttgaaatt gtgacgatga 60 gtgatttcga aataaaaaag taaggaaaaa aaatacaaat aagaaaagtt gtgaaatgat 120 cgtgtaatta tgctttgaat agaggaaaaa aaaaaaaaaa agtggtattt tgacttaatt 180 tctattcggg aaggattctt gcggagagat aatgtgaaac cttatcggaa ataaagaaaa 240 ttcggagaag ttgttagttt ttatttttga ttcggctaca tggggaattt acgaattttt 300 accaaaggat aaatttacca atcctctaca ttctatactg gaaaatcttt gtagttaaaa 360 aatattcgtt acgatttcag aatctataat tcattgaatt cggaattgat ctaaaatgaa 420 aatactagat gggttggtga tggtaggact actcgtactc aattgggaaa atttggcact 480 taggattttg aaattgtagt gactagtgat ttcggaatga aaaagaatga aagaaaaatt 540 tagataaaga caccttaaat ttaagtgata gtgtgattat acgttgaaag gaagaaaatt 600 tgacttaatt ttttttgttt tcgggaagga tttttgcgga gagttaatgt gaagcgttga 660 gggtttgaat ggaattgtgc acttttcgag ggaaataaag ataatatttg gagaagtttt 720 taattatgct acatagggaa tgaatataca atttttttcc aaaggataat ctagaaattt 780 agggattgtt tttttcgaaa aaggttggat gcggcaccgg gacttcccgg gaggtcaccc 840 atcccagtac tattccggcc caagggcgct taactgcaga gttctgatgg gatctggtgt 900 agtagccctg gtatgaccgc atcacgtcaa ggaaggagtt tccggtgtac atgaagaggg 960 taaggtgcgg ccaaaggttc cgccaaaccc gtccgaccag aaaggaagtt tagggtttgg 1020 aaagcccgtt agccagacag aacttgcgcc caaaacggtg ttcgggcgca gatcagtcaa 1080 gaccttttcg gggcaatggg ccgagttggg aggcagaact aaaccctaaa cctaaactca 1140 acccagtcaa gaccttttcg gggcaacgaa ccgaaactgc gagtgggtgc aaatcagtca 1200 agaccttttc ggggcaatga gccgaaactg cgagtgggtg caaatcagtc aagacctttt 1260 cggggcaatg agccaaaact gcgagtgggc gcaaaacagt caagaccttt tcggggcaat 1320 gagccaaaac tgcgagtggg cgcaaaacag tcaagacctt ttcggggcaa tgagccgaaa 1380 ctgcgagtgg gcgcaaaaca gtcaagacct tttcggggca atgagccgaa actgtgacga 1440 ggcgcaaaac agtcaagacc ttttcggggc aatgaaccga aactgcgagt gggcgcaaac 1500 cagtcaagac ctttgggcga gtgtttcagc cggaggcagc cgtgagacgc tgagagtccg 1560 agtcgcatag aggcccgctt gcggcccaaa gcaaaaacag tcaagacctt ttcggggcaa 1620 tgaggcgaaa ctgcgagtag gcgcaaatca gtcaagacct tcgggcgcga gacgctgaga 1680 gtctcagtcg catggaggcc cacttgcggc ccgagtaaaa agcagtcaag gccttttcgg 1740 ggcgagacag ccggttccca agtgttttga agcagctacg aggcagggca aggcaccgag 1800 gctcgcctag agcggcatcc cagcaagaag gaaaaggaaa ggaagaggag gggggtgcta 1860 agggtcaccc cacctcggcc cagcctgcct ttgtgggcag gtaggtacac acacttgggc 1920 ctgaagctcg gacggacttc ggagagattc ttctgagtgc gctgtgggga ccaggtggcc 1980 gagcacttgg ggagagggag tgtgttggcc gaacacttgg gcatcccgct gtgagcgaga 2040 gatctttgag acaagcatgt ggctactggc agggtagccg agcacttggt gaagatagaa 2100 agaattccaa gtggtggaag aagaaaagcc caaggccgaa cacttgcgcg ttgtacagag 2160 agagttgccc ccttccaccc tctgcagcta aaccctaacc ctaaaccctg ggggcctgaa 2220 cttctattta ccttcgacta ctgccaggac aaaccaggta gccgagcact tggaaaatat 2280 tccaagtgtg tagcccagcc tgccggccaa tgggcccatg aagcgagaag aggtaaggct 2340 ccagcgagtc tccactcgca tgcaataagc cgaagatctg agatgctaag gctgaccagg 2400 cccacactct ttccttcctt ccttccttcc ttcctttcgg atcc 2444 // ID AB069716; SV 1; linear; genomic DNA; GSS; PLN; 658 BP. XX AC AB069716; XX DT 08-DEC-2001 (Rel. 70, Created) DT 26-NOV-2003 (Rel. 77, Last updated, Version 2) XX DE Marchantia polymorpha DNA, Y chromosome-linked fragment, clone:rgm108. XX KW genome survey sequence; GSS. XX OS Marchantia polymorpha (liverwort) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Marchantiophyta; OC Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia. XX RN [1] RP 1-658 RA Fujisawa M., Hayashi K., Nishio T., Bando T., Okada S., Yamato K.T., RA Fukuzawa H., Ohyama K.; RT ; RL Submitted (08-AUG-2001) to the INSDC. RL Katsuyuki T. Yamato, Graduate School of Biostudies, Kyoto University, RL Division of Integrated Life Science; Kitashirakawa Oiwake-cho, Sakyo-ku, RL Kyoto, Kyoto 606-8502, Japan (E-mail:kyamato@lif.kyoto-u.ac.jp, RL Tel:+81-75-753-6453, Fax:+81-75-753-6127) XX RN [2] RX PUBMED; 11729146. RA Fujisawa M., Hayashi K., Nishio T., Bando T., Okada S., Yamato K.T., RA Fukuzawa H., Ohyama K.; RT "Isolation of X and Y chromosome-specific DNA markers from a liverwort, RT Marchantia polymorpha, by representational difference analysis"; RL Genetics 159(3):981-985(2001). XX DR MD5; e4d8081fea3886d8d1362e51b7ec3458. XX FH Key Location/Qualifiers FH FT source 1..658 FT /organism="Marchantia polymorpha" FT /chromosome="Y" FT /mol_type="genomic DNA" FT /clone="rgm108" FT /note="Y chromosome-linked genomic DNA fragment isolated by FT representational difference analysis" FT /db_xref="taxon:3197" XX SQ Sequence 658 BP; 174 A; 156 C; 119 G; 209 T; 0 other; agatcttctg aagttcattt taatttggat actttgtatt ctttctgctt tggtgatgga 60 gacctctatc accgctgaaa ctgaggcctg aatactgtaa acgcacaggc ttctgcttta 120 aatttgcacc gatgagcatg aaaagtttgt ccatccgaac gattgtaatt acctttgatg 180 catttgatga cgtgggattc aaagctgcag acatgattac cgaattgagt cctttcaaga 240 tgcactctta ttaagtcgtc aatccccggc aatcacctcg tctcaacatc agctgtttca 300 aatgaagttt gccttccatt ttatagtatc tgtgcgtaac ggcatccaca aggccgcgtt 360 atatggctcc ttcatcacac taaaacacag tcaggtaaga taagtctccg caggtgaatg 420 ctagctaaag tcaggatggt gtaaagtgct cacacacagt ctcttcttcc atcgatccaa 480 tgtatcttca cgagagtgct cctgataatt acaaccggga tcccaaattt tcttctcgcc 540 ttttcgtagc ggcctttctg tagtattttc ctttcacaga actctgtcct tccatctctc 600 cacattgtca tcgacatgaa tttaaaattc gaaaagcaat agaatcactc ttagatct 658 // ID AB069717; SV 1; linear; genomic DNA; GSS; PLN; 221 BP. XX AC AB069717; XX DT 08-DEC-2001 (Rel. 70, Created) DT 26-NOV-2003 (Rel. 77, Last updated, Version 2) XX DE Marchantia polymorpha DNA, Y chromosome-linked fragment, clone:rgm29. XX KW genome survey sequence; GSS. XX OS Marchantia polymorpha (liverwort) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Marchantiophyta; OC Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia. XX RN [1] RP 1-221 RA Fujisawa M., Hayashi K., Nishio T., Bando T., Okada S., Yamato K.T., RA Fukuzawa H., Ohyama K.; RT ; RL Submitted (08-AUG-2001) to the INSDC. RL Katsuyuki T. Yamato, Graduate School of Biostudies, Kyoto University, RL Division of Integrated Life Science; Kitashirakawa Oiwake-cho, Sakyo-ku, RL Kyoto, Kyoto 606-8502, Japan (E-mail:kyamato@lif.kyoto-u.ac.jp, RL Tel:+81-75-753-6453, Fax:+81-75-753-6127) XX RN [2] RX PUBMED; 11729146. RA Fujisawa M., Hayashi K., Nishio T., Bando T., Okada S., Yamato K.T., RA Fukuzawa H., Ohyama K.; RT "Isolation of X and Y chromosome-specific DNA markers from a liverwort, RT Marchantia polymorpha, by representational difference analysis"; RL Genetics 159(3):981-985(2001). XX DR MD5; 6bde978e96b90b55f48abe7ca178d93b. XX FH Key Location/Qualifiers FH FT source 1..221 FT /organism="Marchantia polymorpha" FT /chromosome="Y" FT /mol_type="genomic DNA" FT /clone="rgm29" FT /note="Y chromosome-linked genomic DNA fragment isolated by FT representational difference analysis" FT /db_xref="taxon:3197" XX SQ Sequence 221 BP; 44 A; 44 C; 47 G; 86 T; 0 other; agatctttct ccctttgcgc tgtccaatct ttcaaataac aaggcatcaa ggcttagaat 60 tttgaaaaca cgacggctag ggcttttttc gtcgctagtc attggatttt ttacggggac 120 agccagtttt tttctggtta acattttgac cgcttcttgc tgtttgtttt gtttgccatt 180 ggaattttta tggggtcagt cagttctccg ctgtaagatc t 221 // ID AB069718; SV 1; linear; genomic DNA; GSS; PLN; 899 BP. XX AC AB069718; XX DT 08-DEC-2001 (Rel. 70, Created) DT 26-NOV-2003 (Rel. 77, Last updated, Version 2) XX DE Marchantia polymorpha DNA, Y chromosome-linked fragment, clone:rgm6. XX KW genome survey sequence; GSS. XX OS Marchantia polymorpha (liverwort) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Marchantiophyta; OC Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia. XX RN [1] RP 1-899 RA Fujisawa M., Hayashi K., Nishio T., Bando T., Okada S., Yamato K.T., RA Fukuzawa H., Ohyama K.; RT ; RL Submitted (08-AUG-2001) to the INSDC. RL Katsuyuki T. Yamato, Graduate School of Biostudies, Kyoto University, RL Division of Integrated Life Science; Kitashirakawa Oiwake-cho, Sakyo-ku, RL Kyoto, Kyoto 606-8502, Japan (E-mail:kyamato@lif.kyoto-u.ac.jp, RL Tel:+81-75-753-6453, Fax:+81-75-753-6127) XX RN [2] RX PUBMED; 11729146. RA Fujisawa M., Hayashi K., Nishio T., Bando T., Okada S., Yamato K.T., RA Fukuzawa H., Ohyama K.; RT "Isolation of X and Y chromosome-specific DNA markers from a liverwort, RT Marchantia polymorpha, by representational difference analysis"; RL Genetics 159(3):981-985(2001). XX DR MD5; 573b3cad8636801d231e99a0d8987e9a. XX FH Key Location/Qualifiers FH FT source 1..899 FT /organism="Marchantia polymorpha" FT /chromosome="Y" FT /mol_type="genomic DNA" FT /clone="rgm6" FT /note="Y chromosome-linked genomic DNA fragment isolated by FT representational difference analysis" FT /db_xref="taxon:3197" XX SQ Sequence 899 BP; 290 A; 175 C; 147 G; 287 T; 0 other; agatcttgta ttgatacttg attacccttc tggtgtaacc atagttggat gtcactcccc 60 ttacccctca ggtacagaac tgtactgaaa tgagaccaac taagaaatta gtagaaataa 120 gcacttccac cagatgatca ccgagtgtct aatctgactc tcagcttctt gatatgaaaa 180 caatatacca gaaaagtggt atgagagagt gtttttggct aaaacttgaa cctcatgaac 240 atccataagc taactctaat gtagccctaa tgtagagata ttgacaaacc ttaaatcagt 300 aatttctaat tgataagtta gaattaagtt ttacagaaga aactttccat tgaaatcaac 360 agtatcctca tattttacta ggtcgaaaag ggtaattaag acttcttcat gactctctgc 420 tctatgcaaa atttttatgg attcatcaat ctgtaagttt tcaatctcaa atgtggctaa 480 gtctccatac acaagttata tctggggaaa gacgtttgtc taattttttt ttttcaagat 540 gcaagactaa ttattattat catcattcga agcaaggaag taaacaaaca agagattgca 600 tggtcgtacc aactatcaat gtcataaaac tgctatctcc gggacatctt tctctctgct 660 gtctttctac atttatcatc aatagataca ataatatact caaaccgtcc tgaaggaaga 720 aactttatgg tcctgttaat gataaatgcc gtgtaggtgt taacccttga acaccctccc 780 atctgcggct ttactacgtt gtccctgaga gaggttaagg aataataaaa tcccctcata 840 gagattgcat gtgctttagc attcactaat gttcttaagg tctctaatct tgaagatct 899 // ID AB069719; SV 1; linear; genomic DNA; GSS; PLN; 1075 BP. XX AC AB069719; XX DT 08-DEC-2001 (Rel. 70, Created) DT 26-NOV-2003 (Rel. 77, Last updated, Version 2) XX DE Marchantia polymorpha DNA, X chromosome-linked fragment, clone:rhf73. XX KW genome survey sequence; GSS. XX OS Marchantia polymorpha (liverwort) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Marchantiophyta; OC Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia. XX RN [1] RP 1-1075 RA Fujisawa M., Hayashi K., Nishio T., Bando T., Okada S., Yamato K.T., RA Fukuzawa H., Ohyama K.; RT ; RL Submitted (08-AUG-2001) to the INSDC. RL Katsuyuki T. Yamato, Graduate School of Biostudies, Kyoto University, RL Division of Integrated Life Science; Kitashirakawa Oiwake-cho, Sakyo-ku, RL Kyoto, Kyoto 606-8502, Japan (E-mail:kyamato@lif.kyoto-u.ac.jp, RL Tel:+81-75-753-6453, Fax:+81-75-753-6127) XX RN [2] RX PUBMED; 11729146. RA Fujisawa M., Hayashi K., Nishio T., Bando T., Okada S., Yamato K.T., RA Fukuzawa H., Ohyama K.; RT "Isolation of X and Y chromosome-specific DNA markers from a liverwort, RT Marchantia polymorpha, by representational difference analysis"; RL Genetics 159(3):981-985(2001). XX DR MD5; fa7caf18b80d607c6f0cab5be317152f. XX FH Key Location/Qualifiers FH FT source 1..1075 FT /organism="Marchantia polymorpha" FT /chromosome="X" FT /mol_type="genomic DNA" FT /clone="rhf73" FT /note="X chromosome-linked genomic DNA fragment isolated by FT representational difference analysis" FT /db_xref="taxon:3197" XX SQ Sequence 1075 BP; 289 A; 214 C; 271 G; 301 T; 0 other; aagcttgaat ttctgatata tatctcactc tcctgaaccc gaaactcagg ttttaagcac 60 aggcaggtcg tattgctaat gtttgctaat tgcaggaagt tgaatgggcg cttttcaaag 120 cgtggttcac gagactacag tcatgaggat ccgattgctg tagaggatca taatgatgtt 180 gtgtcggatc ctgacgacga agatgtggat gactttgagg gcaagcagtg tcgcagcggc 240 ttttattcca gcacaggaag tcttgttgga aaacaagaac ttgaccaaac ttctgaattt 300 atgcgggttg ggaaaactaa taggcagtca agacaatttt cggaagaaag gcgcgattgt 360 gcgggaagga tggattgtga aatcccattg agacaggaac gccttagtgg cgatcactcg 420 aggcctggct caagtgaaca tggcattgga agaaaagtcg tgagctacgg acgtaggagt 480 gctgagtacc ctgtaggtgc ggtaaatgcg ttcctgaaaa atgagggtct tgcctcacat 540 gccattgatc gtcgacacag cattgccact gttccgtcag tcacacggcc aagtttcagc 600 gttgacggga aatcacaatt ttgcattgtg caccctacgg caccgggaca ttgatccgtt 660 tggctgttat attttcctgg tggaatcaca tgacaaccct tcatgtgacc cttcagtctt 720 cccccttgtc gatttgacct tgagggggaa gacagatact tctgacagtt cacggacaca 780 tagtgaaatg gtcctagtct gacaatagaa tactcagcag aggtaagtat gatgggtatt 840 tctgggtcac aaatttagta ctatccgccg atatgcaagg ctttgtatag gtaaagatta 900 ggaggtctgg tatgcttctt tgggcatatc gccacgaaca cttgtacaat atttaacata 960 ttatcggtgt tgatttatca agttgggaag atcaatgtag atgttttgtg aattcgacaa 1020 atctcaaaat cccatgtccc ctgcacgatt gacacgaatt tctttttgta agctt 1075 // ID AB069720; SV 1; linear; genomic DNA; GSS; PLN; 1000 BP. XX AC AB069720; XX DT 08-DEC-2001 (Rel. 70, Created) DT 26-NOV-2003 (Rel. 77, Last updated, Version 2) XX DE Marchantia polymorpha DNA, Y chromosome-linked fragment, clone:rhm12. XX KW genome survey sequence; GSS. XX OS Marchantia polymorpha (liverwort) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Marchantiophyta; OC Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia. XX RN [1] RP 1-1000 RA Fujisawa M., Hayashi K., Nishio T., Bando T., Okada S., Yamato K.T., RA Fukuzawa H., Ohyama K.; RT ; RL Submitted (08-AUG-2001) to the INSDC. RL Katsuyuki T. Yamato, Graduate School of Biostudies, Kyoto University, RL Division of Integrated Life Science; Kitashirakawa Oiwake-cho, Sakyo-ku, RL Kyoto, Kyoto 606-8502, Japan (E-mail:kyamato@lif.kyoto-u.ac.jp, RL Tel:+81-75-753-6453, Fax:+81-75-753-6127) XX RN [2] RX PUBMED; 11729146. RA Fujisawa M., Hayashi K., Nishio T., Bando T., Okada S., Yamato K.T., RA Fukuzawa H., Ohyama K.; RT "Isolation of X and Y chromosome-specific DNA markers from a liverwort, RT Marchantia polymorpha, by representational difference analysis"; RL Genetics 159(3):981-985(2001). XX DR MD5; 2e81c41f27704d2317f612886f313f09. XX FH Key Location/Qualifiers FH FT source 1..1000 FT /organism="Marchantia polymorpha" FT /chromosome="Y" FT /mol_type="genomic DNA" FT /clone="rhm12" FT /note="Y chromosome-linked genomic DNA fragment isolated by FT representational difference analysis" FT /db_xref="taxon:3197" XX SQ Sequence 1000 BP; 297 A; 240 C; 197 G; 266 T; 0 other; aagcttttaa gactgaggct tgatccaaac cggttgagag tatttgcgat gcgtcacata 60 caagatatga tcacttacct agaggaaaaa tgatttatat tggttaacgt cacacgtata 120 aatgtaaaga catccattga aaaacaaaca gtgagactct aggtgcattc ttgcgagtcg 180 aggcgtagaa aaagcagcaa gacgtaacgc taaggaaatc tgggactata ttcttgaggc 240 agtccgattt gcgacaactc ctttggtgaa gatggcccac aaaattcctt catttctgct 300 gcaagctgct atctcgagat cttattacga ctcatgaaac atactgtata caggcaaagt 360 tagaggacac gaagtgcatc ctcagaaggt tgtctgactt caaataacat gacagatgga 420 ggtacgagaa aattcttgat agaataaaga ttccacatgt taacacacgt gagtagtgca 480 gtagccacta agaaatggat tcgagccctt gcactttttc cgcagcctcc aagcatcagg 540 taaatgtcaa ccatatgcca caacaatctt caaaattcca tatatccttc gatctttaca 600 gaaatcatag caacaaaaca ggagtactga cgtgtacaag agttctacaa acttataact 660 caaacgctgc ctcttttcct tttcacagga tttcttcccc gctttctggg aagcatcctc 720 ctgctcgacg aaactagtga tgggaccgtt ccatgcattt tctaggagat tatctccaag 780 tcggaccacc cagatgaatg acatccttac aattcctctc ctccacatca gccgggcgcc 840 tctgttcctc atgtcccctt tctgaaccgg taccgtagac atcctgcagt ctggcgaaag 900 aagtcaatac tgaggctcta cctctgtctg gaaggttatg atggactcca ccctgaaatt 960 ttccgagact atgcttcctg gctgcaccat cttcaagctt 1000 // ID AB069721; SV 1; linear; genomic DNA; GSS; PLN; 517 BP. XX AC AB069721; XX DT 08-DEC-2001 (Rel. 70, Created) DT 26-NOV-2003 (Rel. 77, Last updated, Version 2) XX DE Marchantia polymorpha DNA, Y chromosome-derived PAC clone:pMM104E4, SP6 DE promoter side end sequence. XX KW genome survey sequence; GSS. XX OS Marchantia polymorpha (liverwort) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Marchantiophyta; OC Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia. XX RN [1] RP 1-517 RA Fujisawa M., Hayashi K., Nishio T., Bando T., Okada S., Yamato K.T., RA Fukuzawa H., Ohyama K.; RT ; RL Submitted (08-AUG-2001) to the INSDC. RL Katsuyuki T. Yamato, Graduate School of Biostudies, Kyoto University, RL Division of Integrated Life Science; Kitashirakawa Oiwake-cho, Sakyo-ku, RL Kyoto, Kyoto 606-8502, Japan (E-mail:kyamato@lif.kyoto-u.ac.jp, RL Tel:+81-75-753-6453, Fax:+81-75-753-6127) XX RN [2] RX PUBMED; 11729146. RA Fujisawa M., Hayashi K., Nishio T., Bando T., Okada S., Yamato K.T., RA Fukuzawa H., Ohyama K.; RT "Isolation of X and Y chromosome-specific DNA markers from a liverwort, RT Marchantia polymorpha, by representational difference analysis"; RL Genetics 159(3):981-985(2001). XX DR MD5; 4c425e3a70ae00a02c4de1e0a6c8e4e5. XX FH Key Location/Qualifiers FH FT source 1..517 FT /organism="Marchantia polymorpha" FT /chromosome="Y" FT /mol_type="genomic DNA" FT /clone="pMM104E4" FT /db_xref="taxon:3197" XX SQ Sequence 517 BP; 120 A; 114 C; 125 G; 158 T; 0 other; gatctatcta gagcccgcat agtcgggtgc gtgagtcttg gttgaaggaa gtcatcttgt 60 ttcgaaacgg cagtgaagag aatgttccag atcccagttt tggcagacac tgtacctttc 120 aagaagatgg actcttcgca gtcatgtatt catagcccag attcatagta ttgccttctc 180 ttttgagtcg taatttgtct atctgagttg gcttctgtat attacatcgt aactggttgg 240 ttttcctcaa gattgctttg tacatcgtaa actgctctgt tcgcatattg tttcagctgg 300 tggtcgaaag gaagcagggg agaatgcctc aaaataagaa gccacccacg ggcgcagcta 360 gcaaggccta tagtgtccac caaccgaata ttttttcccg agaggttcag ctctctcgta 420 ataccagggg ttcgttggaa atatttggtg gagggccgca gacctcttca cttcttttct 480 cgagaactcg ctccgcttgg aaagatgctc ttcattg 517 // ID AB069722; SV 1; linear; genomic DNA; GSS; PLN; 738 BP. XX AC AB069722; XX DT 08-DEC-2001 (Rel. 70, Created) DT 26-NOV-2003 (Rel. 77, Last updated, Version 2) XX DE Marchantia polymorpha DNA, Y chromosome-derived PAC clone:pMM104E4, T7 DE promoter side end sequence. XX KW genome survey sequence; GSS. XX OS Marchantia polymorpha (liverwort) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Marchantiophyta; OC Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia. XX RN [1] RP 1-738 RA Fujisawa M., Hayashi K., Nishio T., Bando T., Okada S., Yamato K.T., RA Fukuzawa H., Ohyama K.; RT ; RL Submitted (08-AUG-2001) to the INSDC. RL Katsuyuki T. Yamato, Graduate School of Biostudies, Kyoto University, RL Division of Integrated Life Science; Kitashirakawa Oiwake-cho, Sakyo-ku, RL Kyoto, Kyoto 606-8502, Japan (E-mail:kyamato@lif.kyoto-u.ac.jp, RL Tel:+81-75-753-6453, Fax:+81-75-753-6127) XX RN [2] RX PUBMED; 11729146. RA Fujisawa M., Hayashi K., Nishio T., Bando T., Okada S., Yamato K.T., RA Fukuzawa H., Ohyama K.; RT "Isolation of X and Y chromosome-specific DNA markers from a liverwort, RT Marchantia polymorpha, by representational difference analysis"; RL Genetics 159(3):981-985(2001). XX DR MD5; 07dc84b746dfb62f189113655f62bfb2. XX FH Key Location/Qualifiers FH FT source 1..738 FT /organism="Marchantia polymorpha" FT /chromosome="Y" FT /mol_type="genomic DNA" FT /clone="pMM104E4" FT /db_xref="taxon:3197" XX SQ Sequence 738 BP; 217 A; 179 C; 117 G; 225 T; 0 other; atacaaacaa tccttgccgt gagagttgat gttccaaaat gctgtcttgg ccttgtgctt 60 ctcttgaatc aacaacttat gatgtcttgg ccaaagatcc aaagtactaa aattcctagc 120 atgttctatc acatcaaaga tcagctcagg agtaggcatg acatacttat cagactttgt 180 atgctgattg ataagacatt agtcttcaca catttgtcta tccgtgtagt tgtcatgtac 240 atcctttttc attggcatga tagtggctaa tgcatactca ccatgcaaaa actccactaa 300 cctatcctct agtaggtcca acctcctact tcaaatcaag tccttcacta tatcactata 360 ccaataagga tgacaaaaga ttggtatatc actagtcaac tttgtttgta tgtctagttc 420 aatcaaagca atcaactctt tcatgtcaaa gggaaaacaa ttcctatata cacgtaggaa 480 ttgtgtcaac cattgtctct ctcctcctgt gatatgggga tcaatcaatg gctcccaatc 540 cttctctata ggcacattat agggatacga ctctctcact acttgctatg caacatcctc 600 caaagaatca gtacgactct ccatatcctc ctttggatca acctccatgt aaaaaattcc 660 tccaactgca tggggctaca atttcctagc agatcctctt gtgagggtcc caaggaactc 720 caaggatgac atatcttg 738 // ID AB069780; SV 1; linear; genomic DNA; GSS; PLN; 1131 BP. XX AC AB069780; XX DT 08-DEC-2001 (Rel. 70, Created) DT 26-NOV-2003 (Rel. 77, Last updated, Version 2) XX DE Marchantia polymorpha DNA, Y chromosome-linked fragment, clone:rhm13. XX KW genome survey sequence; GSS. XX OS Marchantia polymorpha (liverwort) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Marchantiophyta; OC Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia. XX RN [1] RP 1-1131 RA Fujisawa M., Hayashi K., Nishio T., Bando T., Okada S., Yamato K.T., RA Fukuzawa H., Ohyama K.; RT ; RL Submitted (10-AUG-2001) to the INSDC. RL Katsuyuki T. Yamato, Graduate School of Biostudies, Kyoto University, RL Division of Integrated Life Science; Kitashirakawa Oiwake-cho, Sakyo-ku, RL Kyoto, Kyoto 606-8502, Japan (E-mail:kyamato@lif.kyoto-u.ac.jp, RL Tel:+81-75-753-6453, Fax:+81-75-753-6127) XX RN [2] RX PUBMED; 11729146. RA Fujisawa M., Hayashi K., Nishio T., Bando T., Okada S., Yamato K.T., RA Fukuzawa H., Ohyama K.; RT "Isolation of X and Y chromosome-specific DNA markers from a liverwort, RT Marchantia polymorpha, by representational difference analysis"; RL Genetics 159(3):981-985(2001). XX DR MD5; 3494ddbdcb0e4cc29232ca3d200848b8. XX FH Key Location/Qualifiers FH FT source 1..1131 FT /organism="Marchantia polymorpha" FT /chromosome="Y" FT /mol_type="genomic DNA" FT /clone="rhm13" FT /note="Y chromosome-linked genomic DNA fragment isolated by FT representational difference analysis" FT /db_xref="taxon:3197" XX SQ Sequence 1131 BP; 334 A; 211 C; 207 G; 379 T; 0 other; aagctttttt tttcataact aacttgattc tttagaagaa caaaatagat acttcggttc 60 gttacttcga agaggcacac ttcttccaat gtaaatcgta ataaggctcg gtttcatgga 120 gaagtgtgat aaggctcggt ttcatggaga agtgaaagga gcgaaccatg gaagaggaag 180 aacaatggaa gaacctgaaa tatcaacctg tctccgtcaa gtcaaccgat taacttttag 240 ctgcacctaa ttaatcaagt aatattgttc ctcttgggcc cttctcaagt tttcaaaatt 300 ctgatttcat acctgggaga aacacatggc tagcatgtgc ttcgaattct atatgggaga 360 acgtttgcgt aaataccgat gtctttatca agaaccgaaa ttatgcgaaa tacagtcgcg 420 acctacaatc tcatgcattc ctctaatccg tgctgaatta cggtctttgg agaaccttat 480 attacttctt agcttacaat ttcaaacttc caactcaatg gtttcaaagt tagttctttc 540 tttcctcaca cgaattttcg tctagtatca tctgagactg agattgattt tttttctttc 600 atgacaaaaa aacaaaaata acgatgcata tattagcgtc ttcacgttga cgcataagga 660 cataaactga tctcttgtaa taacgccctc cgcaaacatg aaggagaagt gggatttgat 720 ttcattgcag acatgatgct tggccttgtt catgtaggtg ttttttccca ttaaggcatt 780 ctaataaaaa acgtggcaca tgtattacgg atcatttctc cgatgttatg tatcttatat 840 atgggggcat gcttctgtcg tctagtaagt gaatttgtat tacaaaaaca tatcagcttc 900 aattctttgt gaattcactt caatttgaaa gttgatgaaa tgccttccgg tatcatgcgt 960 cgtctaatgt gaagtacctg gtgtctgaat cttcttggaa ttaaattaga tttatctcta 1020 agactgtcca tattctcttt cattcttgga gatgagcacc atccaatgaa ttaatcagtg 1080 ctttagatat tcatctgtaa tggcttcatg ctaaagtttg gttaaaagct t 1131 // ID AB074032; SV 1; linear; genomic DNA; GSS; PLN; 866 BP. XX AC AB074032; XX DT 09-MAY-2002 (Rel. 71, Created) DT 09-MAY-2002 (Rel. 71, Last updated, Version 1) XX DE Chlamydomonas reinhardtii DNA, clone:F34R30CC125. XX KW genome survey sequence; GSS. XX OS Chlamydomonas reinhardtii OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; OC Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas. XX RN [1] RP 1-866 RA Sano H., Nishiyama R.; RT ; RL Submitted (08-NOV-2001) to the INSDC. RL Rie Nishiyama, Nara Institute of Science and Technology, Research and RL Education Center for Genetic Information; 8916-5 Takayama-cho, Ikoma City, RL Nara 630-0101, Japan (E-mail:rienishi@gtc.aist-nara.ac.jp, RL Tel:81-743-72-5650(ex.5650), Fax:81-743-72-5659) XX RN [2] RA Nishiyama R., Sano H.; RT "5'UTR sequeces of CrMET1 gene from various strains of Chlamydomonas RT reinhardtii"; RL Unpublished. XX DR MD5; 77407e095682b07cd94220f287516e08. DR EuropePMC; PMC130906; 12354891. XX FH Key Location/Qualifiers FH FT source 1..866 FT /organism="Chlamydomonas reinhardtii" FT /strain="CC125" FT /mol_type="genomic DNA" FT /clone="F34R30CC125" FT /cell_type="vegetative cell" FT /note="mt+ gametes" FT /db_xref="taxon:3055" XX SQ Sequence 866 BP; 201 A; 215 C; 258 G; 192 T; 0 other; ggtcattcca gcagttgtgg atgtctaaaa aggagtacgc ggagcacggc gctccgctca 60 tcaaccgaaa gtgcccgtga ggcgtatggg gggggtcgtc ttatgagtta ttggggaaag 120 gtgggacaag gtaggtaggg aagacatgca gccagatgcc ggaagagaac gaccactata 180 gccgggaata ctgcacggac ttgtatggtg cagagttgtc ttgcagggtt tgaggactgg 240 gtgagaagaa acctacccga gaggttctgg cgtgctcaca gacaggcacg tctgtgccca 300 gttgcgtgga tggcccgatc ctgctctggg cgagggtcgc cattgccgct gcggcatccc 360 tagcttgttt tacatgtgta aggaaaacgt atttgaaaaa gtacaaaatg gacctcccgc 420 ccgctgggat tcgcatgcat gaaaagcgag aagacgaaga gtctctgacg ctgcttcacg 480 tatttaactt cacgacacgg cgtcacagcg tagactataa aatctgtctc tctgcatatt 540 gttatagttg ttatgcccag tcaaagcagt tgcgtgtgtt attgatagca ccccttcagg 600 tccgcacgaa ttccagttgc aattcttttc gaggccccgg cacttgcaag gcgtacaaca 660 taggtgcact ggtcgccatg ctcgggaccc ggagcttgat gccgcgaagg cagccgcttc 720 gctctgggtc atcgatgtgc aatctgcagg ctcggagcct gctagcaggc acgcgcaggg 780 ccgcctacgc tgctgtgctc cgtgcatcat cacagcaagt gacgagacgt cgtagaaaca 840 ctcaggttcc agaccttgct gaagaa 866 // ID AB074033; SV 1; linear; genomic DNA; GSS; PLN; 869 BP. XX AC AB074033; XX DT 09-MAY-2002 (Rel. 71, Created) DT 09-MAY-2002 (Rel. 71, Last updated, Version 1) XX DE Chlamydomonas reinhardtii DNA, clone:F34R30CC124. XX KW genome survey sequence; GSS. XX OS Chlamydomonas reinhardtii OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; OC Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas. XX RN [1] RP 1-869 RA Sano H., Nishiyama R.; RT ; RL Submitted (08-NOV-2001) to the INSDC. RL Rie Nishiyama, Nara Institute of Science and Technology, Research and RL Education Center for Genetic Information; 8916-5 Takayama-cho, Ikoma City, RL Nara 630-0101, Japan (E-mail:rienishi@gtc.aist-nara.ac.jp, RL Tel:81-743-72-5650(ex.5650), Fax:81-743-72-5659) XX RN [2] RA Nishiyama R., Sano H.; RT "5'UTR sequeces of CrMET1 gene from various strains of Chlamydomonas RT reinhardtii"; RL Unpublished. XX DR MD5; e274a0ecf9079147038966c99fd7cc8b. DR EuropePMC; PMC130906; 12354891. XX FH Key Location/Qualifiers FH FT source 1..869 FT /organism="Chlamydomonas reinhardtii" FT /strain="CC125" FT /mol_type="genomic DNA" FT /clone="F34R30CC124" FT /cell_type="vegetative cell" FT /note="mt- gametes" FT /db_xref="taxon:3055" XX SQ Sequence 869 BP; 200 A; 218 C; 260 G; 191 T; 0 other; ggtcattcca gcagttgtgg atgtctaaaa aggagtacgc ggagcacggc gctccgctca 60 tcaaccgaaa gtgcccgtga ggcgtatggg ggggggggtc gccttatgag ttattgggga 120 aaggtgggac aaggtaggta gggaagacat gcagccagat gccggaagag aacgaccact 180 atagccggga atactgcacg gacttgtatg gtgcagagtt gtcttgcagg gtttgaggac 240 tgggtgagaa gaaacctacc cgagaggttc tggcgtgctc acagacaggc acgtctgtgc 300 ccagttgcgt ggatggcccg atcctgctct gggcgagggt cgccattgcc gctgcggcat 360 ccctagcttg ttttacatgt gtaaggaaaa cgtatttgaa aaagtacaaa atggacctcc 420 cgcccgctgg gattcgcccg catgaaaagc gagaagacga agagtctctg acgctgcttc 480 acgtatttaa cttcacgaca cggcgtcaca gcgtagacta taaaatctgt ctctctgcat 540 attgttatag ttgttatgcc cagtcaaagc agttgcgtgt gttattgata gcaccccttc 600 aggtccgcac gaattccatt tgcaattctt ttcgaggccc cggcacttgc aaggcgtaca 660 acataggtgc actggtcgcc atgctcggga cccggagctt gatgccgcga aggcagccgc 720 ttcgctctgg gtcatcgatg tgcaatctgc aggctcggag cctgctagca ggcacgcgca 780 gggccgccta cgctgctgtg ctccgtgcat catcacagca agtgacgaga cgtcgtagaa 840 acactcaggt tccagacctt gctgaagaa 869 // ID AB074034; SV 1; linear; genomic DNA; GSS; PLN; 869 BP. XX AC AB074034; XX DT 09-MAY-2002 (Rel. 71, Created) DT 09-MAY-2002 (Rel. 71, Last updated, Version 1) XX DE Chlamydomonas reinhardtii DNA, clone:F34R30me1+. XX KW genome survey sequence; GSS. XX OS Chlamydomonas reinhardtii OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; OC Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas. XX RN [1] RP 1-869 RA Sano H., Nishiyama R.; RT ; RL Submitted (08-NOV-2001) to the INSDC. RL Rie Nishiyama, Nara Institute of Science and Technology, Research and RL Education Center for Genetic Information; 8916-5 Takayama-cho, Ikoma City, RL Nara 630-0101, Japan (E-mail:rienishi@gtc.aist-nara.ac.jp, RL Tel:81-743-72-5650(ex.5650), Fax:81-743-72-5659) XX RN [2] RA Nishiyama R., Sano H.; RT "5'UTR sequeces of CrMET1 gene from various strains of Chlamydomonas RT reinhardtii"; RL Unpublished. XX DR MD5; e274a0ecf9079147038966c99fd7cc8b. DR EuropePMC; PMC130906; 12354891. XX FH Key Location/Qualifiers FH FT source 1..869 FT /organism="Chlamydomonas reinhardtii" FT /strain="CC125" FT /mol_type="genomic DNA" FT /clone="F34R30me1+" FT /cell_type="vegetative cell" FT /note="mt+ gametes" FT /db_xref="taxon:3055" XX SQ Sequence 869 BP; 200 A; 218 C; 260 G; 191 T; 0 other; ggtcattcca gcagttgtgg atgtctaaaa aggagtacgc ggagcacggc gctccgctca 60 tcaaccgaaa gtgcccgtga ggcgtatggg ggggggggtc gccttatgag ttattgggga 120 aaggtgggac aaggtaggta gggaagacat gcagccagat gccggaagag aacgaccact 180 atagccggga atactgcacg gacttgtatg gtgcagagtt gtcttgcagg gtttgaggac 240 tgggtgagaa gaaacctacc cgagaggttc tggcgtgctc acagacaggc acgtctgtgc 300 ccagttgcgt ggatggcccg atcctgctct gggcgagggt cgccattgcc gctgcggcat 360 ccctagcttg ttttacatgt gtaaggaaaa cgtatttgaa aaagtacaaa atggacctcc 420 cgcccgctgg gattcgcccg catgaaaagc gagaagacga agagtctctg acgctgcttc 480 acgtatttaa cttcacgaca cggcgtcaca gcgtagacta taaaatctgt ctctctgcat 540 attgttatag ttgttatgcc cagtcaaagc agttgcgtgt gttattgata gcaccccttc 600 aggtccgcac gaattccatt tgcaattctt ttcgaggccc cggcacttgc aaggcgtaca 660 acataggtgc actggtcgcc atgctcggga cccggagctt gatgccgcga aggcagccgc 720 ttcgctctgg gtcatcgatg tgcaatctgc aggctcggag cctgctagca ggcacgcgca 780 gggccgccta cgctgctgtg ctccgtgcat catcacagca agtgacgaga cgtcgtagaa 840 acactcaggt tccagacctt gctgaagaa 869 // ID AB074035; SV 1; linear; genomic DNA; GSS; PLN; 869 BP. XX AC AB074035; XX DT 09-MAY-2002 (Rel. 71, Created) DT 09-MAY-2002 (Rel. 71, Last updated, Version 1) XX DE Chlamydomonas reinhardtii DNA, clone:F34R30me1-. XX KW genome survey sequence; GSS. XX OS Chlamydomonas reinhardtii OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; OC Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas. XX RN [1] RP 1-869 RA Sano H., Nishiyama R.; RT ; RL Submitted (08-NOV-2001) to the INSDC. RL Rie Nishiyama, Nara Institute of Science and Technology, Research and RL Education Center for Genetic Information; 8916-5 Takayama-cho, Ikoma City, RL Nara 630-0101, Japan (E-mail:rienishi@gtc.aist-nara.ac.jp, RL Tel:81-743-72-5650(ex.5650), Fax:81-743-72-5659) XX RN [2] RA Nishiyama R., Sano H.; RT "5'UTR sequeces of CrMET1 gene from various strains of Chlamydomonas RT reinhardtii"; RL Unpublished. XX DR MD5; e274a0ecf9079147038966c99fd7cc8b. DR EuropePMC; PMC130906; 12354891. XX FH Key Location/Qualifiers FH FT source 1..869 FT /organism="Chlamydomonas reinhardtii" FT /strain="CC125" FT /mol_type="genomic DNA" FT /clone="F34R30me1-" FT /cell_type="vegetative cell" FT /note="mt- gametes" FT /db_xref="taxon:3055" XX SQ Sequence 869 BP; 200 A; 218 C; 260 G; 191 T; 0 other; ggtcattcca gcagttgtgg atgtctaaaa aggagtacgc ggagcacggc gctccgctca 60 tcaaccgaaa gtgcccgtga ggcgtatggg ggggggggtc gccttatgag ttattgggga 120 aaggtgggac aaggtaggta gggaagacat gcagccagat gccggaagag aacgaccact 180 atagccggga atactgcacg gacttgtatg gtgcagagtt gtcttgcagg gtttgaggac 240 tgggtgagaa gaaacctacc cgagaggttc tggcgtgctc acagacaggc acgtctgtgc 300 ccagttgcgt ggatggcccg atcctgctct gggcgagggt cgccattgcc gctgcggcat 360 ccctagcttg ttttacatgt gtaaggaaaa cgtatttgaa aaagtacaaa atggacctcc 420 cgcccgctgg gattcgcccg catgaaaagc gagaagacga agagtctctg acgctgcttc 480 acgtatttaa cttcacgaca cggcgtcaca gcgtagacta taaaatctgt ctctctgcat 540 attgttatag ttgttatgcc cagtcaaagc agttgcgtgt gttattgata gcaccccttc 600 aggtccgcac gaattccatt tgcaattctt ttcgaggccc cggcacttgc aaggcgtaca 660 acataggtgc actggtcgcc atgctcggga cccggagctt gatgccgcga aggcagccgc 720 ttcgctctgg gtcatcgatg tgcaatctgc aggctcggag cctgctagca ggcacgcgca 780 gggccgccta cgctgctgtg ctccgtgcat catcacagca agtgacgaga cgtcgtagaa 840 acactcaggt tccagacctt gctgaagaa 869 // ID AB074036; SV 1; linear; genomic DNA; GSS; PLN; 869 BP. XX AC AB074036; XX DT 09-MAY-2002 (Rel. 71, Created) DT 09-MAY-2002 (Rel. 71, Last updated, Version 1) XX DE Chlamydomonas reinhardtii DNA, clone:F34R30mat1. XX KW genome survey sequence; GSS. XX OS Chlamydomonas reinhardtii OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; OC Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas. XX RN [1] RP 1-869 RA Sano H., Nishiyama R.; RT ; RL Submitted (08-NOV-2001) to the INSDC. RL Rie Nishiyama, Nara Institute of Science and Technology, Research and RL Education Center for Genetic Information; 8916-5 Takayama-cho, Ikoma City, RL Nara 630-0101, Japan (E-mail:rienishi@gtc.aist-nara.ac.jp, RL Tel:81-743-72-5650(ex.5650), Fax:81-743-72-5659) XX RN [2] RA Nishiyama R., Sano H.; RT "5'UTR sequeces of CrMET1 gene from various strains of Chlamydomonas RT reinhardtii"; RL Unpublished. XX DR MD5; 919f3dc08c9935f496fddd27f41099f8. DR EuropePMC; PMC130906; 12354891. XX FH Key Location/Qualifiers FH FT source 1..869 FT /organism="Chlamydomonas reinhardtii" FT /strain="CC125" FT /mol_type="genomic DNA" FT /clone="F34R30mat1" FT /cell_type="vegetative cell" FT /note="mt- gametes" FT /db_xref="taxon:3055" XX SQ Sequence 869 BP; 199 A; 218 C; 261 G; 191 T; 0 other; ggtcattcca gcagttgtgg atgtctaaaa aggagtacgc ggagcacggc gctccgctca 60 tcaaccgaaa gtgcccgtga ggcgtatggg ggggggggtc gccttatgag ttattgggga 120 aaggtgggac aaggtaggta gggaagacat gcagccagat gccggaagag aacgaccact 180 atagccggga atactgcacg gacttgtatg gtgcggagtt gtcttgcagg gtttgaggac 240 tgggtgagaa gaaacctacc cgagaggttc tggcgtgctc acagacaggc acgtctgtgc 300 ccagttgcgt ggatggcccg atcctgctct gggcgagggt cgccattgcc gctgcggcat 360 ccctagcttg ttttacatgt gtaaggaaaa cgtatttgaa aaagtacaaa atggacctcc 420 cgcccgctgg gattcgcccg catgaaaagc gagaagacga agagtctctg acgctgcttc 480 acgtatttaa cttcacgaca cggcgtcaca gcgtagacta taaaatctgt ctctctgcat 540 attgttatag ttgttatgcc cagtcaaagc agttgcgtgt gttattgata gcaccccttc 600 aggtccgcac gaattccatt tgcaattctt ttcgaggccc cggcacttgc aaggcgtaca 660 acataggtgc actggtcgcc atgctcggga cccggagctt gatgccgcga aggcagccgc 720 ttcgctctgg gtcatcgatg tgcaatctgc aggctcggag cctgctagca ggcacgcgca 780 gggccgccta cgctgctgtg ctccgtgcat catcacagca agtgacgaga cgtcgtagaa 840 acactcaggt tccagacctt gctgaagaa 869 // ID AB085909; SV 1; linear; genomic DNA; GSS; PLN; 226 BP. XX AC AB085909; XX DT 04-JUN-2002 (Rel. 72, Created) DT 22-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE Vigna radiata DNA, clone:Mac71, AFLP fragment linked to PMR1 (powdery DE mildew resistance QTL 1). XX KW genome survey sequence; GSS. XX OS Vigna radiata OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna. XX RN [1] RP 1-226 RA Kaga A., Chaitieng B., Tomooka N., Laosuwan P., Vaughan D.; RT ; RL Submitted (30-MAY-2002) to the INSDC. RL Akito Kaga, National Institute of Agrobiological Sciences (NIAS), Crop RL Evolutionary Dynamics Team; Kannondai 2-1-2, Tsukuba, Ibaraki 305-8602, RL Japan (E-mail:kaga@affrc.go.jp, Tel:81-298-38-7474, Fax:81-298-38-7408) XX RN [2] RX DOI; 10.1046/j.1439-0523.2002.00751.x. RX AGRICOLA; IND23315656. RA Chaitieng B., Kaga A., Han O.K., Wang X.W., Wongkaew S., Laosuwan P., RA Tomooka N., Vaughan D.A.; RT "Mapping a new source of resistance to powdery mildew in mungbean"; RL Plant Breed. 121(6):521-525(2002). XX DR MD5; 8e4b437d6267dd6e7163d10d9cf288c4. XX FH Key Location/Qualifiers FH FT source 1..226 FT /organism="Vigna radiata" FT /cultivar="VC1210A" FT /mol_type="genomic DNA" FT /clone="Mac71" FT /note="The sequence was derived from an AFLP fragment that FT is linked to PMR1 (powdery mildew resistance QTL 1)." FT /db_xref="taxon:157791" XX SQ Sequence 226 BP; 73 A; 44 C; 43 G; 66 T; 0 other; gatgagtcct gagtaaaggc acaaatgcca ttggtagtac ccttctatag tcctcaacaa 60 caacatcatg attgacaaac aaaaatagtc ctgttgtgga gaagagtatg ttttcacttt 120 aggggttcca tagtatatat tgacctatac aatgtctttc tccaatacta tcaagtaaaa 180 gcatttctta gactagaact gggcagcact gaattggtac gcagtc 226 // ID AB085910; SV 1; linear; genomic DNA; GSS; PLN; 177 BP. XX AC AB085910; XX DT 04-JUN-2002 (Rel. 72, Created) DT 22-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE Vigna radiata var. sublobata DNA, clone:Mac114, AFLP fragment linked to DE PMR1 (powdery mildew resistance QTL 1). XX KW genome survey sequence; GSS. XX OS Vigna radiata var. sublobata OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna. XX RN [1] RP 1-177 RA Kaga A., Chaitieng B., Tomooka N., Laosuwan P., Vaughan D.; RT ; RL Submitted (30-MAY-2002) to the INSDC. RL Akito Kaga, National Institute of Agrobiological Sciences (NIAS), Crop RL Evolutionary Dynamics Team; Kannondai 2-1-2, Tsukuba, Ibaraki 305-8602, RL Japan (E-mail:kaga@affrc.go.jp, Tel:81-298-38-7474, Fax:81-298-38-7408) XX RN [2] RX DOI; 10.1046/j.1439-0523.2002.00751.x. RX AGRICOLA; IND23315656. RA Chaitieng B., Kaga A., Han O.K., Wang X.W., Wongkaew S., Laosuwan P., RA Tomooka N., Vaughan D.A.; RT "Mapping a new source of resistance to powdery mildew in mungbean"; RL Plant Breed. 121(6):521-525(2002). XX DR MD5; ad048cdf25ef26dcdbd5e5dfb27bfff1. XX FH Key Location/Qualifiers FH FT source 1..177 FT /organism="Vigna radiata var. sublobata" FT /strain="TC1966" FT /variety="sublobata" FT /mol_type="genomic DNA" FT /clone="Mac114" FT /note="The sequence was derived from an AFLP fragment that FT is linked to PMR1 (powdery mildew resistance QTL 1)." FT /db_xref="taxon:87084" XX SQ Sequence 177 BP; 62 A; 37 C; 37 G; 41 T; 0 other; gactgcgtac caattccgtg aaaccagaca agacctactg atgatagggt gatgtagaac 60 acttgcggcc aaaacaaagg gacaaatcat atttgacaat ccaagagggg taaaactagt 120 agttggtgtg ccactatacc tgaaattata cagactttta ctcaggactc atcaatc 177 // ID AB096690; SV 1; linear; genomic DNA; GSS; PLN; 72 BP. XX AC AB096690; XX DT 22-MAY-2003 (Rel. 75, Created) DT 27-FEB-2006 (Rel. 86, Last updated, Version 3) XX DE Chlorella vulgaris DNA, clone:6D4. XX KW genome survey sequence; GSS. XX OS Chlorella vulgaris OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Trebouxiophyceae; OC Chlorellales; Chlorellaceae; Chlorella clade; Chlorella. XX RN [1] RP 1-72 RA Yamada T., Fujimoto Y., Fujie M., Usami S.; RT ; RL Submitted (21-NOV-2002) to the INSDC. RL Takashi Yamada, Hiroshima University, Department of Molecular RL Biotechnology, Graduate School of ADSM; Kagamiyama1-3-1, Higashi-hiroshima, RL Hiroshima 739-8530, Japan (E-mail:tayamad@hiroshima-u.ac.jp, RL URL:http://home.hiroshima-u.ac.jp/mbiotech/ichikou/ itikouindex.html, RL Tel:81-824-24-7750, Fax:81-824-24-7750) XX RN [2] RX PUBMED; 16233464. RA Yamada T., Fujimoto Y., Yamamoto Y., Machida K., Oda M., Fujie M., RA Usami S., Nakayama H.; RT "Minichromosome formation in Chlorella cells irradiated with electron RT beams"; RL J. Biosci. Bioeng. 95(6):601-607(2003). XX DR MD5; 59e51c3c9273554507f2294128780528. XX FH Key Location/Qualifiers FH FT source 1..72 FT /organism="Chlorella vulgaris" FT /strain="C-169" FT /mol_type="genomic DNA" FT /clone="6D4" FT /note="This sequence is retained in minichromosome miniP7 FT which is formed from chromosome I by electron irradiation." FT /db_xref="taxon:3077" XX SQ Sequence 72 BP; 19 A; 21 C; 15 G; 17 T; 0 other; ctgatccatt ttaataacgc ttatcctgcc aagagctcct cgaggcaagg cacgttgcag 60 accagctgca at 72 // ID AB096691; SV 1; linear; genomic DNA; GSS; PLN; 72 BP. XX AC AB096691; XX DT 22-MAY-2003 (Rel. 75, Created) DT 27-FEB-2006 (Rel. 86, Last updated, Version 3) XX DE Chlorella vulgaris DNA, clone:P7. XX KW genome survey sequence; GSS. XX OS Chlorella vulgaris OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Trebouxiophyceae; OC Chlorellales; Chlorellaceae; Chlorella clade; Chlorella. XX RN [1] RP 1-72 RA Yamada T., Fujimoto Y., Fujie M., Usami S.; RT ; RL Submitted (21-NOV-2002) to the INSDC. RL Takashi Yamada, Hiroshima University, Department of Molecular RL Biotechnology, Graduate School of ADSM; Kagamiyama1-3-1, Higashi-hiroshima, RL Hiroshima 739-8530, Japan (E-mail:tayamad@hiroshima-u.ac.jp, RL URL:http://home.hiroshima-u.ac.jp/mbiotech/ichikou/ itikouindex.html, RL Tel:81-824-24-7750, Fax:81-824-24-7750) XX RN [2] RX PUBMED; 16233464. RA Yamada T., Fujimoto Y., Yamamoto Y., Machida K., Oda M., Fujie M., RA Usami S., Nakayama H.; RT "Minichromosome formation in Chlorella cells irradiated with electron RT beams"; RL J. Biosci. Bioeng. 95(6):601-607(2003). XX DR MD5; f7d0a5d60735ee74df5d2babea6b49eb. XX FH Key Location/Qualifiers FH FT source 1..72 FT /organism="Chlorella vulgaris" FT /strain="C-169" FT /mol_type="genomic DNA" FT /clone="P7" FT /note="This sequence is retained in minichromosome miniP7 FT which is formed from chromosome I by electron irradiation." FT /db_xref="taxon:3077" XX SQ Sequence 72 BP; 21 A; 22 C; 10 G; 19 T; 0 other; ctgatccatt ttaataacgc ttatcctgcc aagagctcct cagagtcatc atcactagta 60 ccacaggcat ac 72 // ID AB096692; SV 1; linear; genomic DNA; GSS; PLN; 72 BP. XX AC AB096692; XX DT 22-MAY-2003 (Rel. 75, Created) DT 27-FEB-2006 (Rel. 86, Last updated, Version 3) XX DE Chlorella vulgaris DNA, clone:8D10. XX KW genome survey sequence; GSS. XX OS Chlorella vulgaris OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Trebouxiophyceae; OC Chlorellales; Chlorellaceae; Chlorella clade; Chlorella. XX RN [1] RP 1-72 RA Yamada T., Fujimoto Y., Fujie M., Usami S.; RT ; RL Submitted (21-NOV-2002) to the INSDC. RL Takashi Yamada, Hiroshima University, Department of Molecular RL Biotechnology, Graduate School of ADSM; Kagamiyama1-3-1, Higashi-hiroshima, RL Hiroshima 739-8530, Japan (E-mail:tayamad@hiroshima-u.ac.jp, RL URL:http://home.hiroshima-u.ac.jp/mbiotech/ichikou/ itikouindex.html, RL Tel:81-824-24-7750, Fax:81-824-24-7750) XX RN [2] RX PUBMED; 16233464. RA Yamada T., Fujimoto Y., Yamamoto Y., Machida K., Oda M., Fujie M., RA Usami S., Nakayama H.; RT "Minichromosome formation in Chlorella cells irradiated with electron RT beams"; RL J. Biosci. Bioeng. 95(6):601-607(2003). XX DR MD5; 8d1186d6896e4ce0a9c3a8ea5896b86a. XX FH Key Location/Qualifiers FH FT source 1..72 FT /organism="Chlorella vulgaris" FT /strain="C-169" FT /mol_type="genomic DNA" FT /clone="8D10" FT /note="This sequence is retained in minichromosome miniP7 FT which is formed from chromosome I by electron irradiation." FT /db_xref="taxon:3077" XX SQ Sequence 72 BP; 22 A; 19 C; 13 G; 18 T; 0 other; gactctgcca atatatatag gttgctgtgc aacacatgct cagagtcatc atcactagta 60 ccacaggcat ac 72 // ID AB097494; SV 1; linear; genomic DNA; GSS; PLN; 424 BP. XX AC AB097494; XX DT 05-JUN-2003 (Rel. 76, Created) DT 23-AUG-2007 (Rel. 92, Last updated, Version 3) XX DE Zea mays DNA, clone:rhm a7m36 s-2, AFLP marker closely linked to Southern DE Corn Leaf Blight resistance gene, susceptible allele. XX KW genome survey sequence; GSS. XX OS Zea mays OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea. XX RN [1] RP 1-424 RA Cai H.; RT ; RL Submitted (04-DEC-2002) to the INSDC. RL Hong-wei Cai, Japan Grassland Farming & Forage Seed Association, Forage RL Crop Research Institute; 388-5, Higashiakata, Nishinasuno, Nasu, Tochigi RL 329-2742, Japan (E-mail:hcai@jfsass.or.jp, Tel:81-287-37-6755, RL Fax:81-287-37-6757) XX RN [2] RX DOI; 10.1007/s00438-003-0837-z. RX PUBMED; 12684877. RA Cai H., Gao Z., Yuyama N., Ogawa N.; RT "Identification of AFLP markers closely linked to the rhm gene for RT resistance to Southern Corn Leaf Blight in maize by using bulked segregant RT analysis"; RL Mol. Genet. Genomics 269(3):299-303(2003). XX DR MD5; f88723c088139a2374faa0e30af21988. XX FH Key Location/Qualifiers FH FT source 1..424 FT /organism="Zea mays" FT /mol_type="genomic DNA" FT /clone="rhm a7m36 s-2" FT /note="AFLP marker closely linked to Southern Corn Leaf FT Blight resistance gene, susceptible allele" FT /db_xref="taxon:4577" XX SQ Sequence 424 BP; 131 A; 83 C; 77 G; 127 T; 6 other; gactgcgtac atgcagatgc tggctccatg ttcctcgtag tcctcctttg tgtggcaaaa 60 ctgcgtgaga aaagggaatt acttagattt cattcccaca caatgaactc aaccatcgca 120 attyaccaca ttttactggc gtkataagtt tagatcacat agcagaagta caggcatgat 180 tactaagggt gtgaatagta tggatatttt tcgaccttat tcaagthcga atccatttag 240 aggagtkcag atctatccat accggagtgc ggatattcaa catccgatac cgtatccgaa 300 tactcaaatt gtatatttat gatgttgacg tccatttttg ttctatccga cgtagttgas 360 actatycaca ttcaaatacg aatagaaata tataaaaaaa atgtagtatt actcaggact 420 catc 424 // ID AB097495; SV 1; linear; genomic DNA; GSS; PLN; 418 BP. XX AC AB097495; XX DT 05-JUN-2003 (Rel. 76, Created) DT 23-AUG-2007 (Rel. 92, Last updated, Version 3) XX DE Zea mays DNA, clone:rhm a7m36 r-8, AFLP marker closely linked to Southern DE Corn Leaf Blight resistance gene, resistant allele. XX KW genome survey sequence; GSS. XX OS Zea mays OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea. XX RN [1] RP 1-418 RA Cai H.; RT ; RL Submitted (04-DEC-2002) to the INSDC. RL Hong-wei Cai, Japan Grassland Farming & Forage Seed Association, Forage RL Crop Research Institute; 388-5, Higashiakata, Nishinasuno, Nasu, Tochigi RL 329-2742, Japan (E-mail:hcai@jfsass.or.jp, Tel:81-287-37-6755, RL Fax:81-287-37-6757) XX RN [2] RX DOI; 10.1007/s00438-003-0837-z. RX PUBMED; 12684877. RA Cai H., Gao Z., Yuyama N., Ogawa N.; RT "Identification of AFLP markers closely linked to the rhm gene for RT resistance to Southern Corn Leaf Blight in maize by using bulked segregant RT analysis"; RL Mol. Genet. Genomics 269(3):299-303(2003). XX DR MD5; c035eca4c161fd2816b8dde300005a51. XX FH Key Location/Qualifiers FH FT source 1..418 FT /organism="Zea mays" FT /mol_type="genomic DNA" FT /clone="rhm a7m36 r-8" FT /note="AFLP marker closely linked to Southern Corn Leaf FT Blight resistance gene, resistant allele" FT /db_xref="taxon:4577" XX SQ Sequence 418 BP; 130 A; 88 C; 74 G; 126 T; 0 other; gactgcgtac atgcagatgc tggctccatg ttcctcgtag tcctcctttg tgtggcaaaa 60 ctgcatgaga aaagggaatc acttagattt cattcccaca caatgaactc aaccatcgca 120 attcaccaca ttttactggc gttataagtt tagatcagat agcagaagta ctggcatgat 180 tactaagggt gtaaatagta tggatatatt tcgaccttat tcaagtccga atccatttag 240 agttcagatc tatccatacc ggagtgcgga tattcaacat ccgataccgt attcgaatac 300 tcaaattgta tatttatgat gtcgacgtcc atttttgtcc tatccgacgt agttgacact 360 atccacattc aaatacgaat agaaatataa aaaaatgtag tattactcag gactcatc 418 // ID AB154851; SV 1; linear; genomic DNA; GSS; PLN; 768 BP. XX AC AB154851; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF8045_0_701_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF8045. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-768 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; e042c044186e1cbaff961924777fde5f. XX FH Key Location/Qualifiers FH FT source 1..768 FT /organism="Oryza sativa Japonica Group" FT /strain="NF8045" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF8045_0_701_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 768 BP; 208 A; 163 C; 154 G; 243 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt agtgcttttc tcaccttttg tactcccctc 300 tgtacagcct atcatgaagc ctcaggttga gatcatgcac aaaaaccgga attcttttca 360 agtaagtgta ggccaactac ttgaccggaa agatgagagg ggtatgaaag atcagctgtg 420 caacggcctc caattgaacg aagttattga ccgaaaagtg gcaaaacttt ctggtggtga 480 gctccaaaga gttggaatag cagcagctgc cctgcaaagc gcggatgttt acatgtttga 540 tgagccatca agttatcttg atgttaagca gaggcttaat gctgcacgag tcataaagtc 600 cctgcttaga acaaacaggt aatttgtaac cttctttcat gattaatctt actacttttt 660 tgactgatag cttcaagaaa tttaccatca tttgcctccc taattttggt tttcagctat 720 gttatcgggg gggaacatga cttgagtgtc ttaaatacat gtccgact 768 // ID AB154852; SV 1; linear; genomic DNA; GSS; PLN; 281 BP. XX AC AB154852; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF9877_0_505_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF9877. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-281 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 9971872c60f418d93067bbd195d50c61. XX FH Key Location/Qualifiers FH FT source 1..281 FT /organism="Oryza sativa Japonica Group" FT /strain="NF9877" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF9877_0_505_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 281 BP; 70 A; 63 C; 48 G; 100 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt agtgcttttc t 281 // ID AB154853; SV 1; linear; genomic DNA; GSS; PLN; 357 BP. XX AC AB154853; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T36619T, 3' flanking sequence of DE Tos17 insertion in rice strain NG8003. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-357 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 66dba35571611621f589baf34129b3bf. XX FH Key Location/Qualifiers FH FT source 1..357 FT /organism="Oryza sativa Japonica Group" FT /strain="NG8003" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T36619T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 357 BP; 90 A; 86 C; 63 G; 114 T; 4 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttcngcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagngt catcaagggt agngcttttc tcaccttttg tactcccctc 300 tgtacagcct atcatgaagc ctcaggttga natcatgcac aaaaaccggg caggtac 357 // ID AB154854; SV 1; linear; genomic DNA; GSS; PLN; 501 BP. XX AC AB154854; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T34460T, 3' flanking sequence of DE Tos17 insertion in rice strain NG6044. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-501 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 085c88ef8e55246fde63f1809992abcd. XX FH Key Location/Qualifiers FH FT source 1..501 FT /organism="Oryza sativa Japonica Group" FT /strain="NG6044" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T34460T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 501 BP; 148 A; 120 C; 82 G; 144 T; 7 other; cttggcagtt cagaaatcaa tgtgctgatg atactcaaat atcgaaggtg cttcagctca 60 ccaatacatt caggcaagct gctactgttg taaaacgaca aatgtagtac acgtagcttc 120 ttcagattct tcaatagctg attaaaaata tcatctccgt catccatgag agggtcaatg 180 cagataacag tgcgtaaata acgtagcttg cagatctttt gcttatggaa tttcatactg 240 tcaacacaaa tagatagatg tcgaacagtg gctggtatct ctttcacccc atcatcttct 300 aatctgaagc agtcttcttt antcagtgac tctgccaaat catgaagcag atcatgcata 360 atgtaccatg tacccatata tctttcagaa actggtngaa agaaagatcc tgacaccatc 420 tcattnaant aatccctgcc antancttca attctcttat ccccctggtt gcgtgaatcc 480 actancccct ctggccaccc a 501 // ID AB154855; SV 1; linear; genomic DNA; GSS; PLN; 474 BP. XX AC AB154855; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T09582T, 3' flanking sequence of DE Tos17 insertion in rice strain ND4529. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-474 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 5ebb21603058b44d4b34ce87ec44e15c. XX FH Key Location/Qualifiers FH FT source 1..474 FT /organism="Oryza sativa Japonica Group" FT /strain="ND4529" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T09582T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 474 BP; 119 A; 102 C; 93 G; 160 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaact aatttgcggc gtcagctact gccacttcat 240 ggtgaggaca tcaataattt gttatttttc tgttaatata aaaaaagctt taagtataaa 300 tttttcaaaa tgttaagctg atgaggattg cgtgttttgt ttgatctcgc agcaaatttg 360 ccaccgggat ttgaagctgg agaacacgct gctggatggc agccctgcgc cgcgcctcaa 420 gatctgcgac tttggctact ccaaggtaac aatttcttct ctctcttttt tttt 474 // ID AB154856; SV 1; linear; genomic DNA; GSS; PLN; 272 BP. XX AC AB154856; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T01137T, 3' flanking sequence of DE Tos17 insertion in rice strain NC0091. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-272 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 21e7c783075354a643ba57d639e0a337. XX FH Key Location/Qualifiers FH FT source 1..272 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0091" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T01137T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 272 BP; 71 A; 61 C; 46 G; 94 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatggatct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt ag 272 // ID AB154857; SV 2; linear; genomic DNA; GSS; PLN; 226 BP. XX AC AB154857; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 3) XX DE Oryza sativa Japonica Group DNA, clone:H0091_0_02_1A, 3' flanking sequence DE of Tos17 insertion in rice strain H0091. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-226 RA Miyao A., Shinozuka Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; a9098213de2ef7832d8135e1688e91d8. XX FH Key Location/Qualifiers FH FT source 1..226 FT /organism="Oryza sativa Japonica Group" FT /strain="H0091" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="H0091_0_02_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 226 BP; 49 A; 51 C; 29 G; 77 T; 20 other; ctcctttctt tgcnggntcn acctgattgg catgaaatcc ttncgtactt ccatggntct 60 gnacttcana attacttcaa gcgtatggtc nangataacc tcaaggtgca tgttttttta 120 ctcgattncc tttcaccctc aatgnantgt ttctgcactg tatcancatg taaatnanct 180 nctgcantac atncaaatcn tcnatgaaat catgcatttt tctttc 226 // ID AB154858; SV 1; linear; genomic DNA; GSS; PLN; 365 BP. XX AC AB154858; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:H0233_0_04_1A, 3' flanking sequence DE of Tos17 insertion in rice strain H0233. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-365 RA Miyao A., Shinozuka Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; ae8c7caa03565a0f52d879717ca12216. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Oryza sativa Japonica Group" FT /strain="H0233" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="H0233_0_04_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 365 BP; 91 A; 87 C; 61 G; 124 T; 2 other; ctcctttctt tgcaggatcc anctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt agtgcttttc tcaccttttg tactcccctc 300 tgtacagcct atcatgaagc ctcaggttga gatcatgcac aaaaaccgga attcttntct 360 ctcga 365 // ID AB154859; SV 1; linear; genomic DNA; GSS; PLN; 241 BP. XX AC AB154859; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF7816_0_403_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF7816. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-241 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 349fcd454a48e754a3e6e450a8f84c84. XX FH Key Location/Qualifiers FH FT source 1..241 FT /organism="Oryza sativa Japonica Group" FT /strain="NF7816" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF7816_0_403_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 241 BP; 61 A; 56 C; 40 G; 84 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tattaccatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc attccaccta 240 t 241 // ID AB154860; SV 1; linear; genomic DNA; GSS; PLN; 427 BP. XX AC AB154860; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0332_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0332. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-427 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 7acb7d28eaa18b58dff598b6067e5b73. XX FH Key Location/Qualifiers FH FT source 1..427 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0332" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0332_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 427 BP; 112 A; 95 C; 79 G; 123 T; 18 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc naggataacc tcaaggtgca tgtttttnta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagn aatccaccta 240 tgcttttagn catcnantgt catcaagnnn agtgctttnc ncaccttttg nacncccctc 300 ngnacagcct atcatgaagc ctcaggttga gatcatgcac aaaaaccgga attcttttca 360 agnaagtgta ggccaactac ttgaccggaa angatgagag gggtatgaaa gatcagcngt 420 gcaacgg 427 // ID AB154861; SV 1; linear; genomic DNA; GSS; PLN; 308 BP. XX AC AB154861; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T30423T, 3' flanking sequence of DE Tos17 insertion in rice strain NG2583. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-308 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 827dd9260d1542d3f2e5618c56c2b95b. XX FH Key Location/Qualifiers FH FT source 1..308 FT /organism="Oryza sativa Japonica Group" FT /strain="NG2583" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T30423T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 308 BP; 75 A; 74 C; 49 G; 107 T; 3 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgn ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttant catcaagtgt catcaagtgt atagcttttc tcaccttttg tactcccccc 300 tgtanagc 308 // ID AB154862; SV 1; linear; genomic DNA; GSS; PLN; 412 BP. XX AC AB154862; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T31909T, 3' flanking sequence of DE Tos17 insertion in rice strain NG4028. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-412 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; db68868066e22b1a582c8acd79bd8ef1. XX FH Key Location/Qualifiers FH FT source 1..412 FT /organism="Oryza sativa Japonica Group" FT /strain="NG4028" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T31909T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 412 BP; 111 A; 92 C; 74 G; 128 T; 7 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg tgaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagngt catcaagngt agngcttttc tcaccttttg tactcccctc 300 tgtacagcct aacatgaagc ctcaggttga natcatgcac aaaaaccgga attcttttca 360 agtaagngta ggccaactac ttgaccggaa anatgaaagg ggtatgaaan at 412 // ID AB154863; SV 1; linear; genomic DNA; GSS; PLN; 366 BP. XX AC AB154863; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:H0120_4_102_1A, 3' flanking sequence DE of Tos17 insertion in rice strain H0120. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-366 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; f80a6c6496b3fcc60ab891f9f8b54cd2. XX FH Key Location/Qualifiers FH FT source 1..366 FT /organism="Oryza sativa Japonica Group" FT /strain="H0120" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="H0120_4_102_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 366 BP; 92 A; 85 C; 62 G; 124 T; 3 other; ctcctttctt tgcaggatcc anctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg tanttaaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt agtgcttttc tcaccttttg tactcccctc 300 tgtacagcct atcatgaagc cncaggttga gatcatgcac aaaaaccgga attcttttca 360 agtaag 366 // ID AB154864; SV 1; linear; genomic DNA; GSS; PLN; 365 BP. XX AC AB154864; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:H0140_3_104_1A, 3' flanking sequence DE of Tos17 insertion in rice strain H0140. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-365 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 6e0f5c6dcd9eb926cfd165b614fee718. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Oryza sativa Japonica Group" FT /strain="H0140" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="H0140_3_104_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 365 BP; 89 A; 90 C; 61 G; 124 T; 1 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg tanctaaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt agtgcttttc tcaccttttg tactcccctc 300 tgtacagcct atcatgaagc ctcaggttga gatcatgcac aaaaaccgga attcttctct 360 ctcga 365 // ID AB154865; SV 2; linear; genomic DNA; GSS; PLN; 249 BP. XX AC AB154865; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 3) XX DE Oryza sativa Japonica Group DNA, clone:T09660T, 3' flanking sequence of DE Tos17 insertion in rice strain ND4556. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-249 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 709c6bbcbc6945d60e32ea68d8875060. XX FH Key Location/Qualifiers FH FT source 1..249 FT /organism="Oryza sativa Japonica Group" FT /strain="ND4556" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T09660T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 249 BP; 62 A; 56 C; 42 G; 87 T; 2 other; ctcctttctt tgcaggatcc acctgnttgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttntagc aatccaccta 240 tgcttttag 249 // ID AB154866; SV 1; linear; genomic DNA; GSS; PLN; 219 BP. XX AC AB154866; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T30218T, 3' flanking sequence of DE Tos17 insertion in rice strain NG2531. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-219 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; b5af357f198c207a95f9d77fca7280c8. XX FH Key Location/Qualifiers FH FT source 1..219 FT /organism="Oryza sativa Japonica Group" FT /strain="NG2531" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T30218T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 219 BP; 55 A; 53 C; 41 G; 68 T; 2 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcnattgcc tttcaccctc aatgaagtgt ttctgcactg natcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaac ctgcccggg 219 // ID AB154867; SV 1; linear; genomic DNA; GSS; PLN; 250 BP. XX AC AB154867; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T34892T, 3' flanking sequence of DE Tos17 insertion in rice strain NG6576. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-250 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 49d8d85a68e2a952a2cec1724afa2eb9. XX FH Key Location/Qualifiers FH FT source 1..250 FT /organism="Oryza sativa Japonica Group" FT /strain="NG6576" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T34892T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 250 BP; 63 A; 57 C; 42 G; 87 T; 1 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg natcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt 250 // ID AB154868; SV 1; linear; genomic DNA; GSS; PLN; 312 BP. XX AC AB154868; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T00286T, 3' flanking sequence of DE Tos17 insertion in rice strain H0828. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-312 RA Miyao A., Miyazaki A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 7f8f8e2cdf1712fec112f7b50f42f02b. XX FH Key Location/Qualifiers FH FT source 1..312 FT /organism="Oryza sativa Japonica Group" FT /strain="H0828" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T00286T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 312 BP; 76 A; 76 C; 50 G; 110 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc caggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt agtgcttttc taaccttttg tactcccctc 300 tgtacagcct ac 312 // ID AB154869; SV 1; linear; genomic DNA; GSS; PLN; 206 BP. XX AC AB154869; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T00362T, 3' flanking sequence of DE Tos17 insertion in rice strain H0017. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-206 RA Miyao A., Miyazaki A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 31b9553949ca690b20a9d32ba6674378. XX FH Key Location/Qualifiers FH FT source 1..206 FT /organism="Oryza sativa Japonica Group" FT /strain="H0017" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T00362T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 206 BP; 71 A; 31 C; 44 G; 48 T; 12 other; atncaaanat gttacaaggc aggatatgcn ccaatncgtn agttggtaaa caantgcctt 60 ctggaggaaa ctgatgatga cagactantt aaaatgcatg atgtgatact tgacntggca 120 ctatggattg taagcaacna aggaagggac aanaatannt gggttgtaca aacagtatct 180 cactggcatg ctgcaaaaca aatatt 206 // ID AB154870; SV 1; linear; genomic DNA; GSS; PLN; 239 BP. XX AC AB154870; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T27661T, 3' flanking sequence of DE Tos17 insertion in rice strain NG0090. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-239 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 0890425ef1c38bbcad3dad122d821df8. XX FH Key Location/Qualifiers FH FT source 1..239 FT /organism="Oryza sativa Japonica Group" FT /strain="NG0090" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T27661T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 239 BP; 61 A; 57 C; 40 G; 81 T; 0 other; ctcctttctt tgcaggatcc acctgatctg gcatgaaatc cttgcgtact tccatgggtc 60 tgaacttcag aattacttca agcgtatggt cgaggataac ctcaaggtgc atgttttttt 120 actcgattgc ctttcaccct caatgaagtg tttctgcact gtatcatcat gtaaataaac 180 tgctgcaata catgcaaatc atcgatgaaa tcatgcattt ttttttctag caatccacc 239 // ID AB154871; SV 1; linear; genomic DNA; GSS; PLN; 296 BP. XX AC AB154871; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T25150T, 3' flanking sequence of DE Tos17 insertion in rice strain NF8509. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-296 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 0b3fe29795802483608e9972d80e265b. XX FH Key Location/Qualifiers FH FT source 1..296 FT /organism="Oryza sativa Japonica Group" FT /strain="NF8509" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T25150T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 296 BP; 58 A; 47 C; 57 G; 133 T; 1 other; cctttcatgt gctgatgtcg atgcatgcta tcccatgttt acctcttatt aaagcaagtg 60 attgaatatt ttttttcttt ttcttttttg caggtggtag ctataacggt gttcttcttg 120 ttgtgtatag aattctatgc tttcttttca ccatttcttg ggaaggactt gtatcaattt 180 atcgcaatag gtgtttatag ttttctggta atgttcttcc tgttcacgca ttgaattttg 240 gagtagtana ttttgtttga caagcgtttg atgttcattt ctggcatttc aggcct 296 // ID AB154872; SV 1; linear; genomic DNA; GSS; PLN; 350 BP. XX AC AB154872; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:H0140_1_101_1A, 3' flanking sequence DE of Tos17 insertion in rice strain H0140. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-350 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 01137ad5f9002506f9be246d3ace0821. XX FH Key Location/Qualifiers FH FT source 1..350 FT /organism="Oryza sativa Japonica Group" FT /strain="H0140" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="H0140_1_101_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 350 BP; 68 A; 84 C; 55 G; 86 T; 57 other; ctcctttctt tgcaagntcc acctgnttng cnnnaaatcc ttncgnactt ccatgggtca 60 gnacntcann ntnacttcaa gcgtntggnc ggggntaacc tcaaggtgca tgttttntta 120 cgcgantncc tttcaccctc aatgcagtgn ttctncactg nancatcatg tcntcanact 180 gctgcaatac atgcnaatca gcgatgaaat cangcatttt ttttncnagc aatccnccna 240 tgcttttagn catcaagtgn catcaagtgt agngcntttc tcancngntg nactccccnc 300 ngtncagnnt ancnnnnnnc cncnggtngn gatcatgcac naaaaccgga 350 // ID AB154873; SV 1; linear; genomic DNA; GSS; PLN; 464 BP. XX AC AB154873; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T38123T, 3' flanking sequence of DE Tos17 insertion in rice strain NG9535. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-464 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; a7978d5f0bfdbed32c412869b8315ef1. XX FH Key Location/Qualifiers FH FT source 1..464 FT /organism="Oryza sativa Japonica Group" FT /strain="NG9535" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T38123T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 464 BP; 126 A; 102 C; 83 G; 142 T; 11 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatggtgtc 60 tgaacgttca gaatgtactt caagcgtatg gtcgaggata acctcaaggn gcatgttttt 120 ttactcgatt gcctttcacc ctcaatgaag tgtttctgca ctgtatcatc atgtaaataa 180 actgctgcaa tacatgcaaa tcatcgatga aatcatgcat ttttttttct agcaatccac 240 ctatgctttt agncttnaag tgtcntcaag tgtagagctt ttctcacctt ttgtactccc 300 ctctgtacag cctatcatga agcctcaggt tganatcatg cacaaaaacc ggaattcttt 360 tcaantaagt gtaggccaac tacttnnccg gaaaaataan aggggtatna aaaatcanct 420 gtgcaacggc ctccaattga acgaagttat tgaccgaaaa gtgg 464 // ID AB154874; SV 1; linear; genomic DNA; GSS; PLN; 280 BP. XX AC AB154874; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:H0140_3_303_1A, 3' flanking sequence DE of Tos17 insertion in rice strain H0140. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-280 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 62d8afd6208807332b55da81952ce98a. XX FH Key Location/Qualifiers FH FT source 1..280 FT /organism="Oryza sativa Japonica Group" FT /strain="H0140" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="H0140_3_303_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 280 BP; 70 A; 62 C; 49 G; 99 T; 0 other; ctcctttctt tgcaggatcg acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt agtgcttttc 280 // ID AB154875; SV 1; linear; genomic DNA; GSS; PLN; 248 BP. XX AC AB154875; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T14390T, 3' flanking sequence of DE Tos17 insertion in rice strain NE3511. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-248 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; f89747298900a6a6dfd126dd4765c2e1. XX FH Key Location/Qualifiers FH FT source 1..248 FT /organism="Oryza sativa Japonica Group" FT /strain="NE3511" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T14390T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 248 BP; 63 A; 56 C; 41 G; 86 T; 2 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggngca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttntagc aatccaccta 240 tgctttta 248 // ID AB154876; SV 1; linear; genomic DNA; GSS; PLN; 425 BP. XX AC AB154876; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF7794_0_404_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF7794. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-425 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 7eb0ad9f32c68dc0d268f0eb5488e1ca. XX FH Key Location/Qualifiers FH FT source 1..425 FT /organism="Oryza sativa Japonica Group" FT /strain="NF7794" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF7794_0_404_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 425 BP; 113 A; 98 C; 79 G; 135 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt agtgcttttc tcaccttttg tactcccctc 300 tgtacagcct atcatgaagc ctcaggttga gatcatgcac aaaaaccgga attctttcca 360 agtaagtgta ggccaactac ttgaccggaa agatgagagg ggtatgaaag atcaccttgt 420 gcaac 425 // ID AB154877; SV 1; linear; genomic DNA; GSS; PLN; 184 BP. XX AC AB154877; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T05894T, 3' flanking sequence of DE Tos17 insertion in rice strain NC2631. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-184 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; e83cdf76ee226e1fc741fd7565913e12. XX FH Key Location/Qualifiers FH FT source 1..184 FT /organism="Oryza sativa Japonica Group" FT /strain="NC2631" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T05894T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 184 BP; 38 A; 47 C; 38 G; 61 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatgcggccg ctcgagccct 180 atta 184 // ID AB154878; SV 1; linear; genomic DNA; GSS; PLN; 420 BP. XX AC AB154878; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0130_0_402_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0130. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-420 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 9911eb355a155b86e8e0e48280a2d384. XX FH Key Location/Qualifiers FH FT source 1..420 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0130" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0130_0_402_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 420 BP; 111 A; 90 C; 79 G; 120 T; 20 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacntcaa gcgtatggtc gnngataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt ttnnaactag caatccacnn 240 atgcttttag tcatcaanng tcatnaagng nagtgctttt ctcacctttt gnactcccct 300 ctgtanagcc natcatgaag cctcaggttg agtcatggca caaaaacngg aattcntttc 360 aagaaagtgn aggccaacta cttgaccgga aagangangg ggggtatgaa agatcagctg 420 // ID AB154879; SV 1; linear; genomic DNA; GSS; PLN; 299 BP. XX AC AB154879; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T05117T, 3' flanking sequence of DE Tos17 insertion in rice strain NC2530. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-299 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 7ff27e667cc32165f925da81a3c96d6b. XX FH Key Location/Qualifiers FH FT source 1..299 FT /organism="Oryza sativa Japonica Group" FT /strain="NC2530" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T05117T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 299 BP; 73 A; 70 C; 48 G; 107 T; 1 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aataaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt agtgcttttc tnaccttttg tactcccct 299 // ID AB154880; SV 1; linear; genomic DNA; GSS; PLN; 333 BP. XX AC AB154880; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:H0180_1_104_1A, 3' flanking sequence DE of Tos17 insertion in rice strain H0180. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-333 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 0484da9e0fa6ce237dfe4bc882ca9ee8. XX FH Key Location/Qualifiers FH FT source 1..333 FT /organism="Oryza sativa Japonica Group" FT /strain="H0180" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="H0180_1_104_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 333 BP; 78 A; 78 C; 55 G; 108 T; 14 other; ctcctttctt tgcaggatcc anntgattgg catgaaatcc ttgcgtcctt ccataggtct 60 gnacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taannaaact 180 gctgcaatac atacaaatca tcgatgaaat catgcanttt tttttntcgc aatcctaccg 240 anncttttag ttcatcaagn gtcancaagt gtagngcttt tctcaccttt ngtactcccc 300 tctgtacagc ctatcangaa gcctcaggtt gag 333 // ID AB154881; SV 2; linear; genomic DNA; GSS; PLN; 186 BP. XX AC AB154881; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 3) XX DE Oryza sativa Japonica Group DNA, clone:H0180_3_202_1A, 3' flanking sequence DE of Tos17 insertion in rice strain H0180. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-186 RA Miyao A., Murata K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 608a78a8e3467bc2d85b2f39067f4822. XX FH Key Location/Qualifiers FH FT source 1..186 FT /organism="Oryza sativa Japonica Group" FT /strain="H0180" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="H0180_3_202_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 186 BP; 40 A; 43 C; 36 G; 56 T; 11 other; ctcctttctt tgcaggatcc acnngattgg catgaantcc ttgcgtactt ccatgngtnc 60 cgaacttcag aattacttca agcgtatggt cgaggntaac ctcaaggtgc atgttntttt 120 actcgantgc ctttcaccnt cagtgaagtg nttcngcact gtatcatcag gtaaataaac 180 tgctgc 186 // ID AB154882; SV 1; linear; genomic DNA; GSS; PLN; 226 BP. XX AC AB154882; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:H0821_4_202_1A, 3' flanking sequence DE of Tos17 insertion in rice strain H0821. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-226 RA Miyao A., Murata K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; bae40531b1b859a0250045fee149cabe. XX FH Key Location/Qualifiers FH FT source 1..226 FT /organism="Oryza sativa Japonica Group" FT /strain="H0821" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="H0821_4_202_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 226 BP; 56 A; 51 C; 39 G; 79 T; 1 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgntgaaat catgcatttt tttttc 226 // ID AB154883; SV 1; linear; genomic DNA; GSS; PLN; 471 BP. XX AC AB154883; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:H0185_0_02_1A, 3' flanking sequence DE of Tos17 insertion in rice strain H0185. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-471 RA Miyao A., Shinozuka Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; b8cbfd7f898fa3a63eb72b242136867f. XX FH Key Location/Qualifiers FH FT source 1..471 FT /organism="Oryza sativa Japonica Group" FT /strain="H0185" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="H0185_0_02_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 471 BP; 127 A; 105 C; 87 G; 141 T; 11 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gancttcana attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt agtgctttnc tcacctttng tactcccctc 300 tgtacagcct acnntganta actcaggttg agatcatgca caaaaaccgg aattcttttc 360 aagtaagnnc aaggccaact acttgaccgg aaagatgaga ggggtatgaa agatcagctg 420 tgcaacggcc tccaattgan cgaagtattg nccgaaaagt ggcaaaactt t 471 // ID AB154884; SV 1; linear; genomic DNA; GSS; PLN; 249 BP. XX AC AB154884; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T00677T, 3' flanking sequence of DE Tos17 insertion in rice strain NC0028. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-249 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; b8c4bf756ca090d60d5a25908e0109d1. XX FH Key Location/Qualifiers FH FT source 1..249 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0028" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T00677T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 249 BP; 63 A; 56 C; 41 G; 84 T; 5 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgatngcc tttcaccctc aatgaagngt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttntanc antccaccta 240 tgctttaag 249 // ID AB154885; SV 1; linear; genomic DNA; GSS; PLN; 206 BP. XX AC AB154885; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:H0194_0_231_1A, 3' flanking sequence DE of Tos17 insertion in rice strain H0194. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-206 RA Miyao A., Shinozuka Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 4a39d8d0d07b615b5f5b2d434db89472. XX FH Key Location/Qualifiers FH FT source 1..206 FT /organism="Oryza sativa Japonica Group" FT /strain="H0194" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="H0194_0_231_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 206 BP; 48 A; 47 C; 34 G; 60 T; 17 other; ctcctttctt tgcaggatcc acctgattgg catganatcc ttncgtactt ccangggnct 60 gaanttcana attacttcaa ncgtatggnc gaggacaacc tcaaggtgna tgttttttta 120 ctcgattgcc tttcacccnc aatgnngtgt ttcnncactg tatcatcatg naaatanact 180 gctgcaatac atgcaaatca tcgang 206 // ID AB154886; SV 1; linear; genomic DNA; GSS; PLN; 263 BP. XX AC AB154886; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T05341T, 3' flanking sequence of DE Tos17 insertion in rice strain NC2552. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-263 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 89e4d52e04e6497033f8c4d7181c0b40. XX FH Key Location/Qualifiers FH FT source 1..263 FT /organism="Oryza sativa Japonica Group" FT /strain="NC2552" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T05341T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 263 BP; 66 A; 58 C; 44 G; 91 T; 4 other; ctcctttctt tgcaggatcc acctgattgg natgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcattnt tttttctagc antccaccta 240 tgnttttagt catcaagtgt cat 263 // ID AB154887; SV 1; linear; genomic DNA; GSS; PLN; 354 BP. XX AC AB154887; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:H0343_3_101_1A, 3' flanking sequence DE of Tos17 insertion in rice strain H0343. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-354 RA Miyao A., Shinozuka Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 4a5bd2a8e562688deaea346027a21850. XX FH Key Location/Qualifiers FH FT source 1..354 FT /organism="Oryza sativa Japonica Group" FT /strain="H0343" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="H0343_3_101_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 354 BP; 89 A; 82 C; 59 G; 118 T; 6 other; ctcctttctt tgcaggatcc atntgattgg catgaaatcc ttgcgtactt ccatgggtnt 60 gaacttcaga attncttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt agtgcttttc tcacctttng tactcccctc 300 tgnacagcct atcatgaagc ctcaggttga natcatgcac aaaaaccgga attc 354 // ID AB154888; SV 1; linear; genomic DNA; GSS; PLN; 480 BP. XX AC AB154888; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T15882T, 3' flanking sequence of DE Tos17 insertion in rice strain NE5023. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-480 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 364928de94c627c20c3505a02c46ce00. XX FH Key Location/Qualifiers FH FT source 1..480 FT /organism="Oryza sativa Japonica Group" FT /strain="NE5023" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T15882T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 480 BP; 127 A; 102 C; 82 G; 143 T; 26 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcana attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttntanc aatccaccta 240 tgcttttagt catcaagngt catcaagngt agngcttttn tcaccttttg tnctcccctn 300 tgtncagcct atcatnaanc ctcaggttga natcatgcnc aaaaaccgga attnttttca 360 agtaagngta ggccaactac ttgaccggaa anatnaaagg ggtntnaaan atcanctgtg 420 caacggcctc caattgaaca aanttnttga ccgaaaagng gcaaaacttt ntgggcaggt 480 // ID AB154889; SV 1; linear; genomic DNA; GSS; PLN; 479 BP. XX AC AB154889; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:H0223_1_101_1A, 3' flanking sequence DE of Tos17 insertion in rice strain H0223. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-479 RA Miyao A., Murata K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; c5f8ccf577e6e2dc829d5370d20b5e36. XX FH Key Location/Qualifiers FH FT source 1..479 FT /organism="Oryza sativa Japonica Group" FT /strain="H0223" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="H0223_1_101_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 479 BP; 130 A; 104 C; 93 G; 138 T; 14 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taannaaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttcnagc aanccaccta 240 tgcttttagn cancaagngt cancaagtgt agtgcttttc tcaccttttg antaacccct 300 ctgnaccnta ctatcatgaa gcctcaggtt gagatcatgc acaaaaaccg gaattctttt 360 caaggaagtn naggccaact acttgaccgg aaagatgaga ggggtatgaa agatcagctg 420 tgcaanggcc tccaattgaa cgaagttatt gaccgaaaag tggcaaaact ttctggtgg 479 // ID AB154890; SV 1; linear; genomic DNA; GSS; PLN; 235 BP. XX AC AB154890; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:H0225_0_231_1A, 3' flanking sequence DE of Tos17 insertion in rice strain H0225. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-235 RA Miyao A., Shinozuka Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; ebbb6e29b45ae9544de40699dfca5cf7. XX FH Key Location/Qualifiers FH FT source 1..235 FT /organism="Oryza sativa Japonica Group" FT /strain="H0225" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="H0225_0_231_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 235 BP; 59 A; 52 C; 40 G; 79 T; 5 other; ctcctttctt tgcaggatcc acntgattgg catganatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctncactg natcatcang taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catggcattt ttttttctag caatc 235 // ID AB154891; SV 1; linear; genomic DNA; GSS; PLN; 226 BP. XX AC AB154891; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0680_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0680. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-226 RA Miyao A., Murata K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 295a1f5e476f7fd7632b83938e75a386. XX FH Key Location/Qualifiers FH FT source 1..226 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0680" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0680_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 226 BP; 57 A; 51 C; 39 G; 78 T; 1 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat cangcatttt tttttc 226 // ID AB154892; SV 1; linear; genomic DNA; GSS; PLN; 318 BP. XX AC AB154892; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF9866_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF9866. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-318 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 9d68817e241fed4980c3ffdd48bcb6a8. XX FH Key Location/Qualifiers FH FT source 1..318 FT /organism="Oryza sativa Japonica Group" FT /strain="NF9866" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF9866_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 318 BP; 78 A; 75 C; 52 G; 111 T; 2 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gntgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt agngcttttc tcaccttttg tactcccctc 300 tgtacagcct atcatgaa 318 // ID AB154893; SV 1; linear; genomic DNA; GSS; PLN; 600 BP. XX AC AB154893; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF6803_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF6803. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-600 RA Miyao A., Sawaki M., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 5c97424587c3de6c6412de4f7f03998b. XX FH Key Location/Qualifiers FH FT source 1..600 FT /organism="Oryza sativa Japonica Group" FT /strain="NF6803" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF6803_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 600 BP; 168 A; 107 C; 134 G; 189 T; 2 other; ctttnatctg ttgcttattt tttaagtctt atcatctgaa tagctacaat agcaatacag 60 agatgtggac tgcaccaggt ctgagctgct taaggttgcc ttcaccgaaa aatggctgcc 120 cgaaaggctc caaaataatc ggaaagcaac agccaagcaa aggtacnttt gcggcattaa 180 tgttcttaac aatttatcaa atgtatttta ttgtatctta ggtagagacg ttggtgtttc 240 ctaagcctag gtgtttagct gtaaaggaac atatcaaact ttgtataagg gccaaaaaat 300 atctaggagc gaagacccat acgacccatg tggctgtgta tgggagataa ggaaatccct 360 tctaatttaa aaaatcctat tgggtagatc ctcaggtttg acggatgaca acatcgatgg 420 tcatgctgaa tttacgtcta ggtgtttggg taatgcagct ttgaattctt atgcgtggta 480 gtcagcttgt aattgtgatt gtgttatgct gcagttagcc ttgggcccct catgccactg 540 ggcatttgtt tgcccaagtt taccagaatt tgtgatgact tatttgtccg atgaaaaata 600 // ID AB154894; SV 1; linear; genomic DNA; GSS; PLN; 352 BP. XX AC AB154894; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0447_0_103_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0447. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-352 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; da449ec1cc972dd7854e4305fa0d9e00. XX FH Key Location/Qualifiers FH FT source 1..352 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0447" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0447_0_103_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 352 BP; 89 A; 85 C; 60 G; 112 T; 6 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gcngccaata catgcaaatc atcgatgaaa tcatgcattt ttttttctag caatccacct 240 atgcttttag tcatcaagtg tcatcaagtg tagtgcnntt ctcacctttn gnactcccct 300 ctgtacagcc tatcatgaag cctcaggttg agatcatgca caaaaaccgg na 352 // ID AB154895; SV 1; linear; genomic DNA; GSS; PLN; 486 BP. XX AC AB154895; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21990T, 3' flanking sequence of DE Tos17 insertion in rice strain NF4893. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-486 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 5595e86ab851033574a6d0ee67215432. XX FH Key Location/Qualifiers FH FT source 1..486 FT /organism="Oryza sativa Japonica Group" FT /strain="NF4893" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21990T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 486 BP; 141 A; 105 C; 94 G; 144 T; 2 other; tgtaccactt gcggggtgca gccaagtatc caagttgcca ttgggcatga acttatacac 60 tagagccttg aaatcattgc ctacattatc agttgttgag catgaagtta gaactggaag 120 tagattccgg tgccgaatgc tcctcaaagc tttgcattct gtcatgaaac ttctatctgc 180 accttgcata tcaagatgaa aaactttcac agcgacaacc atgttttctt gggttagcgt 240 tcctttgtac actgaaccgt agcttcctct cccaatcaga ttactttctg cgaagttctc 300 tgtagcttga gctagatctt taaaagaaac tatagcaaac tgatcactag aaggcagcaa 360 tggtaactgc tttctgaaca tcttctttct gaaaattgca aggtaggcca naaatatgag 420 acataaaatg cctaatgtag gggacnaata ccttgaccaa aaaatgtcgt cgtccagttt 480 tacttt 486 // ID AB154896; SV 1; linear; genomic DNA; GSS; PLN; 469 BP. XX AC AB154896; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T23227T, 3' flanking sequence of DE Tos17 insertion in rice strain NG0009. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-469 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; a0e8c099fdbf912d8c12369727af6743. XX FH Key Location/Qualifiers FH FT source 1..469 FT /organism="Oryza sativa Japonica Group" FT /strain="NG0009" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T23227T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 469 BP; 132 A; 105 C; 79 G; 141 T; 12 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtg cgaggataac ctcaaggtgc atgttttttt 120 actcgattgc ctttcaccct caatgaagtg tttctgcact gtatcatcat gtaaataaac 180 tgctgcaata catgcaaatc atcgatgaaa tcatgcattt ttttttctag caatccacct 240 atgcttttag tcatcaagng tcatcaagtg tagngctttt ctcacctttt gtactcccct 300 ctgtacagcc tatcatgaag cctcaggttg anatcatgca caaaaaccgg aattcttttc 360 aagtaagtgt aggccaacta cttgaccgaa aanatgaaag gggtatgaaa aatcanctgt 420 gcaacngccc ccaattgaac aaanttattg accnaaaann gnnaaactt 469 // ID AB154897; SV 1; linear; genomic DNA; GSS; PLN; 576 BP. XX AC AB154897; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:H0343_5_207_1A, 3' flanking sequence DE of Tos17 insertion in rice strain H0343. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-576 RA Miyao A., Shinozuka Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; b4dad5ea1a2d069005ea54cd0703d5bf. XX FH Key Location/Qualifiers FH FT source 1..576 FT /organism="Oryza sativa Japonica Group" FT /strain="H0343" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="H0343_5_207_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 576 BP; 153 A; 122 C; 104 G; 192 T; 5 other; ctcctttctt tgcaggatcc acntgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctatgttttg gatacttata ccgttatacg caaanattta ttcagactaa ggatgcaaat 180 gctgtcagct tatggatact aacttcttgg ttgttttttc cagcctgcag atatttattt 240 gattgatgaa ccaagcgcat ctctcgattc agagcagcgt cttgttgcct caaaggttat 300 caaaagattt atcatgcatg caaagaaaac tgcgtttatt gtcgagcatg atttcattat 360 ggcaacctac ttagccgaca gggttatcgt ctacgaggga cagcctgctg ttgactgtac 420 tgccaatgca ccacagtctt tgctatccgg gatgaataag ttcttatcag taagtgcagc 480 catcatccat caaccaagtt ataaacttat aataacttac tanaanagta ctaactcaag 540 tttgtttctt ctttactaac ttcanctctg cttctc 576 // ID AB154898; SV 1; linear; genomic DNA; GSS; PLN; 198 BP. XX AC AB154898; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:H0407_1_101_1A, 3' flanking sequence DE of Tos17 insertion in rice strain H0407. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-198 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 7763e2e416f4d41ef7c71a4a6108c680. XX FH Key Location/Qualifiers FH FT source 1..198 FT /organism="Oryza sativa Japonica Group" FT /strain="H0407" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="H0407_1_101_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 198 BP; 47 A; 43 C; 33 G; 64 T; 11 other; ctcctttctt tgcaggatcc anctgattng cannaaatcc ttgcgtacnt ncatgggtct 60 taacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgnttgcc tttcacntca atgaagtgtt tcngcactgn atcatcatgt aantaaactg 180 ttgcaatcca tgcaaatc 198 // ID AB154899; SV 1; linear; genomic DNA; GSS; PLN; 403 BP. XX AC AB154899; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF3734_0_403_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF3734. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-403 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 8c693738f658b6c1c618a34043cde901. XX FH Key Location/Qualifiers FH FT source 1..403 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3734" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF3734_0_403_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 403 BP; 105 A; 92 C; 75 G; 131 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt agtgcttttc tcaccttttg tactcccctc 300 tgtacagcct atcatgaagc ctcaggttga gatcatgcac aaaaaccgga attcttttca 360 agtaagtgta ggccaactac ttgaccggaa agatgagagg ggt 403 // ID AB154900; SV 1; linear; genomic DNA; GSS; PLN; 501 BP. XX AC AB154900; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T31995T, 3' flanking sequence of DE Tos17 insertion in rice strain NG4065. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-501 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 34b4c2d5f41285a621391e3f45018801. XX FH Key Location/Qualifiers FH FT source 1..501 FT /organism="Oryza sativa Japonica Group" FT /strain="NG4065" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T31995T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 501 BP; 139 A; 112 C; 91 G; 139 T; 20 other; ctcctttctt tgcaggatcc accctgattg gcatgaaatc cttgcgtact tccatgggtc 60 tgaacttcag aattacttca agcgtatggt cgaggataac ctcaaggtgc angttttttt 120 actcgattgc ctttcaccct caatgaactg tttctgcact gtatcatcat gtaaataaac 180 tgctgcaata catgcaaatc atcgatgaaa tcatgcattt ttttttctag caatccacct 240 atgnttttag tcatcaaggg tcatcaagng tagggctttt ctcncctntt gnactcccct 300 ctgtacagcc taccatgaag cctcaggttg anatcatgcc caaaaaccgn aattcttttc 360 aagnaagngt aggccaacta nttgaccgga aaaatgaaag gggtatgaaa aatcacntgn 420 gcancggcct ccaattgaac aaanttattg accgaaaagn ggcaaaactt tctgggggng 480 anctccaaaa agttgnaaan c 501 // ID AB154901; SV 1; linear; genomic DNA; GSS; PLN; 392 BP. XX AC AB154901; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:H0642_2_202_1A, 3' flanking sequence DE of Tos17 insertion in rice strain H0642. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-392 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; ea98429040c1e98c13486e6211bfadff. XX FH Key Location/Qualifiers FH FT source 1..392 FT /organism="Oryza sativa Japonica Group" FT /strain="H0642" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="H0642_2_202_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 392 BP; 92 A; 88 C; 68 G; 111 T; 33 other; ctcctttctt tgcaggatcc acntgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga nttacttcaa gcgtatggtc gaggataacc tcaaggtgca tnttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgtngaaat catgcatttt nttnnctagc agtccaccta 240 ngnntttagt cannaagtgn catcaagtgt ngtgctttnc tcnccnttng gactccccnc 300 tgnanagcct nnccntgaan ccncaggntn ngatnatgca caaaaaccgg nantcttttc 360 aagtaagggt aggccaacta cttgnccgga aa 392 // ID AB154902; SV 1; linear; genomic DNA; GSS; PLN; 474 BP. XX AC AB154902; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T09683T, 3' flanking sequence of DE Tos17 insertion in rice strain ND4543. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-474 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 44ca309ac820235710cfe54a344883ff. XX FH Key Location/Qualifiers FH FT source 1..474 FT /organism="Oryza sativa Japonica Group" FT /strain="ND4543" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T09683T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 474 BP; 118 A; 102 C; 94 G; 160 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcgccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaact aatttgcggc gtcagctact gccacttcat 240 ggtgaggaca tcaataattt gttatttttc tgttaatata aaaaaagctt taagtataaa 300 tttttcaaaa tgttaagctg atgaggattg cgtgttttgt ttgatctcgc agcaaatttg 360 ccaccgggat ttgaagctgg agaacacgct gctggatggc agccctgcgc cgcgcctcaa 420 gatctgcgac tttggctact ccaaggtaac aatttcttct ctctcttttt tttt 474 // ID AB154903; SV 2; linear; genomic DNA; GSS; PLN; 203 BP. XX AC AB154903; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 3) XX DE Oryza sativa Japonica Group DNA, clone:H0657_1_201_1A, 3' flanking sequence DE of Tos17 insertion in rice strain H0657. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-203 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; aed93d98bc9e11fce5ef941017395368. XX FH Key Location/Qualifiers FH FT source 1..203 FT /organism="Oryza sativa Japonica Group" FT /strain="H0657" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="H0657_1_201_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 203 BP; 49 A; 47 C; 37 G; 64 T; 6 other; ctcctttcnt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gnggataacc tcaaggtgca tgttttttta 120 ntcgattncc tttcaccctc antgaagtgt ttctgcactg tatcancatg taaataaact 180 gctgcaagac atgcaaatca tcg 203 // ID AB154904; SV 1; linear; genomic DNA; GSS; PLN; 457 BP. XX AC AB154904; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NE1507_0_501_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NE1507. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-457 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 1edde41b27fc799c25c1fa060b2fb09d. XX FH Key Location/Qualifiers FH FT source 1..457 FT /organism="Oryza sativa Japonica Group" FT /strain="NE1507" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NE1507_0_501_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 457 BP; 127 A; 103 C; 83 G; 144 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt agtgcttttc taaccttttg gctcccctat 300 gtacagccta tcatgaagcc tcaggttgag atcatgcaca aaaaccggaa ttcttttcaa 360 gtaagtgtag gccaactact tgaccggaaa gatgaaaggg gtttgaaaga tcaccttttg 420 caacggcctc caattgaacc aaattattga ccgaaaa 457 // ID AB154905; SV 1; linear; genomic DNA; GSS; PLN; 254 BP. XX AC AB154905; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19071T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1035. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-254 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 34465f6ae722943ddc6f152c32351330. XX FH Key Location/Qualifiers FH FT source 1..254 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1035" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19071T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 254 BP; 63 A; 63 C; 49 G; 78 T; 1 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcana attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaac ctgcccgggc ggccgctcga gccctattaa 240 ttacaagacg gttt 254 // ID AB154906; SV 1; linear; genomic DNA; GSS; PLN; 295 BP. XX AC AB154906; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0449_0_503_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0449. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-295 RA Miyao A., Shinozuka Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; df9fde696b97a200c1e552e04cdb550b. XX FH Key Location/Qualifiers FH FT source 1..295 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0449" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0449_0_503_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 295 BP; 73 A; 67 C; 50 G; 103 T; 2 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcnatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt agtgcttttc tcaacattng actcg 295 // ID AB154907; SV 1; linear; genomic DNA; GSS; PLN; 217 BP. XX AC AB154907; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T05316T, 3' flanking sequence of DE Tos17 insertion in rice strain NC2518. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-217 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 24cbe5b0dbf08238479a7b701a1d0dbc. XX FH Key Location/Qualifiers FH FT source 1..217 FT /organism="Oryza sativa Japonica Group" FT /strain="NC2518" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T05316T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 217 BP; 53 A; 50 C; 38 G; 71 T; 5 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg tnaataaact 180 gctgcantnc atgcanatca tcnatgaaat catgcat 217 // ID AB154908; SV 1; linear; genomic DNA; GSS; PLN; 366 BP. XX AC AB154908; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:H0786_1_203_2A, 3' flanking sequence DE of Tos17 insertion in rice strain H0786. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-366 RA Miyao A., Shinozuka Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; b606839b04473aaa7d90de82c35e6f9d. XX FH Key Location/Qualifiers FH FT source 1..366 FT /organism="Oryza sativa Japonica Group" FT /strain="H0786" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="H0786_1_203_2A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 366 BP; 92 A; 84 C; 65 G; 115 T; 10 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataanc tcaaggtgca tgtnttttgn 120 ntcgattgcc tttcaccctc aatgaagtgt ttctgcactg natcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgctttnagn catcaagtgt cagcaagngt agtgcttttc ncaccttttg nactcccctc 300 tgtacagcct atgcaggaag cctcaggttg agattcatgc acaaaaaccg gaattctttt 360 caagta 366 // ID AB154909; SV 1; linear; genomic DNA; GSS; PLN; 239 BP. XX AC AB154909; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:H0786_1_302_1A, 3' flanking sequence DE of Tos17 insertion in rice strain H0786. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-239 RA Miyao A., Shinozuka Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 3f1e9f405e8490fd0e0684406c045987. XX FH Key Location/Qualifiers FH FT source 1..239 FT /organism="Oryza sativa Japonica Group" FT /strain="H0786" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="H0786_1_302_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 239 BP; 61 A; 52 C; 40 G; 82 T; 4 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacn tnaaggtgca tgttttttta 120 ctcgattgcn tttcaccctc aatgaagtgt ttctgcactg tatntcatgt aaataaactg 180 ctgcaataca tgcaaatcat cgatgaaatc atgcattttt ttttctagca atccaccta 239 // ID AB154910; SV 1; linear; genomic DNA; GSS; PLN; 267 BP. XX AC AB154910; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T38747T, 3' flanking sequence of DE Tos17 insertion in rice strain NG0180. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-267 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 448c980a594f467afc79235ef5073789. XX FH Key Location/Qualifiers FH FT source 1..267 FT /organism="Oryza sativa Japonica Group" FT /strain="NG0180" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T38747T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 267 BP; 69 A; 60 C; 45 G; 90 T; 3 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtnctt ccatgggtct 60 gaacttcaga attacttcaa gcgnatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tagatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagngt catcaag 267 // ID AB154911; SV 1; linear; genomic DNA; GSS; PLN; 226 BP. XX AC AB154911; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:H0789_1_202_1A, 3' flanking sequence DE of Tos17 insertion in rice strain H0789. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-226 RA Miyao A., Murata K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 80ca1737ec58126b7211368d55f84874. XX FH Key Location/Qualifiers FH FT source 1..226 FT /organism="Oryza sativa Japonica Group" FT /strain="H0789" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="H0789_1_202_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 226 BP; 56 A; 47 C; 34 G; 77 T; 12 other; ctcctttctt tgcaggatcc acntgattgg catgaaatcc ttncgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatngtc gnngataacc tcaaggtgca tgttttttta 120 ctcnattgcc tttcaccctc aatnaagtgt ttctncactg natcatcatg taaataaact 180 ggctgnaata natgcaaatc atcgatgaaa tcatgnattt tttttc 226 // ID AB154912; SV 1; linear; genomic DNA; GSS; PLN; 178 BP. XX AC AB154912; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:H0821_4_305_1A, 3' flanking sequence DE of Tos17 insertion in rice strain H0821. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-178 RA Miyao A., Murata K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 37fd138ac97fbbc159b1732d37eba318. XX FH Key Location/Qualifiers FH FT source 1..178 FT /organism="Oryza sativa Japonica Group" FT /strain="H0821" FT /cultivar="Hitomebore" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="H0821_4_305_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 178 BP; 43 A; 41 C; 32 G; 60 T; 2 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgnatggtc gagnataact caaggtgcat gtttttttac 120 tcgattgcct ttcaccctca atgaagtgtt tctgcactgt atcatcatgt aaataaac 178 // ID AB154913; SV 1; linear; genomic DNA; GSS; PLN; 488 BP. XX AC AB154913; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T34596T, 3' flanking sequence of DE Tos17 insertion in rice strain NG6085. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-488 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; cf224f302913d8a17a107bb35e233bf2. XX FH Key Location/Qualifiers FH FT source 1..488 FT /organism="Oryza sativa Japonica Group" FT /strain="NG6085" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T34596T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 488 BP; 114 A; 131 C; 108 G; 129 T; 6 other; ctgacnacac catttgtatt tgattcagat agctgatgat ctcatgttat gcccagaagg 60 atggacatcg tccaaggnag caattcctcc aaagaactgg atcctctcat gctcgcatga 120 caccggtttt tcttgtgcna acaattcctc caacgagctg ctcctctcat gttcaccagc 180 aacaggnctt ggcctgtggn gaagggacac agacataccc ttgatggtga tcattatttt 240 cttcctctgc tgggacaaca tctgaagagt taggcaccat tgagccattg ttcctgaagc 300 taatagaccc tgaaaccgcg gcaccgtgaa catcagagca cggtttgctg gactccaccg 360 gtaccaaggc acggtgtcca tgatctctgt gctctgtgtc tgtctcaacc tcagaatcca 420 ttgtggtgag agcgtccacg tagatgtcaa cttcanagtt gtatcccttg ctgcttcctg 480 cagaccga 488 // ID AB154914; SV 1; linear; genomic DNA; GSS; PLN; 272 BP. XX AC AB154914; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NE7017_0_403_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NE7017. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-272 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 4924b642312522c3c62200efad3b5d9d. XX FH Key Location/Qualifiers FH FT source 1..272 FT /organism="Oryza sativa Japonica Group" FT /strain="NE7017" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NE7017_0_403_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 272 BP; 71 A; 61 C; 44 G; 93 T; 3 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc taggataacc tcaaggtgca tgtttttnta 120 ctcgattgcc tttcaccctc aatgaagngt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctanc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt aa 272 // ID AB154915; SV 1; linear; genomic DNA; GSS; PLN; 385 BP. XX AC AB154915; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T38559T, 3' flanking sequence of DE Tos17 insertion in rice strain NG0137. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-385 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 97ce4ad4fa24ec0135027f623628c827. XX FH Key Location/Qualifiers FH FT source 1..385 FT /organism="Oryza sativa Japonica Group" FT /strain="NG0137" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T38559T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 385 BP; 93 A; 88 C; 63 G; 125 T; 16 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcntactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccncctn 240 tgcttttagt catcaagngn catcaantgt agggcttttn tcnccttttg tactcccctc 300 tntacagcct atnatgaagc cncnggttga natcntgcnc aaaaaccgga attnttttca 360 agtaagtgta ggccaactac ttgac 385 // ID AB154916; SV 1; linear; genomic DNA; GSS; PLN; 488 BP. XX AC AB154916; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T40587T, 3' flanking sequence of DE Tos17 insertion in rice strain NG0627. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-488 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 47ce42b67fc933a6667b8f84f5e46b20. XX FH Key Location/Qualifiers FH FT source 1..488 FT /organism="Oryza sativa Japonica Group" FT /strain="NG0627" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T40587T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 488 BP; 148 A; 101 C; 99 G; 140 T; 0 other; gattccacac ctcactgccc acttcagaag ctcatctcga caaatttatc aactgatgtg 60 tacaaacctc aaaaattgga agctgcaagc ttagtaagtt gttcaagaga tttaccaaga 120 gatcagcacg gtgtagttgg cccaataact tgcctcagta acaacgcaag ccagtggtat 180 ttgatacatc cttatgcata ttgtctgttc ttcagccaga ctgcaaagtt gttagtaatg 240 gcatccaggc accctcaact tttaaggaaa cagaaaatgg agtaatcggt gttgatgagt 300 tggtattcac ttggtactcc agtgacataa ccagagattg tcaaaaatgt gaaaatgaag 360 gcaaacactg tggtttcagc tcacaaaggg gccgagcatt ctgcaattat ggtattttct 420 ctttctgaag cagaaatctt acatcaatat tatgacttgc tttgccttgg taggaaactc 480 tatggtct 488 // ID AB154917; SV 1; linear; genomic DNA; GSS; PLN; 226 BP. XX AC AB154917; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0648_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0648. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-226 RA Miyao A., Murata K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; c3f0f299eaf7aad561ac3cf464c212d8. XX FH Key Location/Qualifiers FH FT source 1..226 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0648" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0648_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 226 BP; 56 A; 51 C; 39 G; 78 T; 2 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gnggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttcngcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttc 226 // ID AB154918; SV 1; linear; genomic DNA; GSS; PLN; 345 BP. XX AC AB154918; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF6020_0_701_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF6020. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-345 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 7b1f095502a7d3dced72cde23c43a490. XX FH Key Location/Qualifiers FH FT source 1..345 FT /organism="Oryza sativa Japonica Group" FT /strain="NF6020" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF6020_0_701_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 345 BP; 87 A; 81 C; 59 G; 118 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tgatcatcat gtaaataaac 180 tgctgcaata catgcaaatc atcgatgaaa tcatgcattt ttttttctag caatccacct 240 atgcttttag tcatcaagtg tcatcaagtg tagtgctttt ctcacctttt gtactcccct 300 ttgtacagcc tatcatgaag cctcaggttg agatcatgca caaaa 345 // ID AB154919; SV 1; linear; genomic DNA; GSS; PLN; 349 BP. XX AC AB154919; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC2525_0_502_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC2525. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-349 RA Miyao A., Murata K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; fd2373ee4edf27c7bb9911f9e4c45c29. XX FH Key Location/Qualifiers FH FT source 1..349 FT /organism="Oryza sativa Japonica Group" FT /strain="NC2525" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC2525_0_502_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 349 BP; 86 A; 82 C; 60 G; 112 T; 9 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgnaat catgcatttt tttttcnagn aatccaccta 240 tgctttnagt catcaagtgt catcaagtgn agtgcttttc tcaccttttg nactcccctc 300 tgnanagcct atcatgnagc ctcaggttga gatcatgcac aaaaaccgg 349 // ID AB154920; SV 1; linear; genomic DNA; GSS; PLN; 229 BP. XX AC AB154920; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0018_0_432_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0018. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-229 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 0c16254edaf326778075383917ab5a03. XX FH Key Location/Qualifiers FH FT source 1..229 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0018" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0018_0_432_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 229 BP; 55 A; 49 C; 37 G; 74 T; 14 other; ctcctttctt tgcaggatcc acctgattgn natgnaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgtnttnnta 120 ctcgattggc ctttcacccn caangnagtg tttctgcant gtatcatcat gtaaataaac 180 tgctnccaat acatgnaaat catcgatnaa atcatgcatt tntttttct 229 // ID AB154921; SV 1; linear; genomic DNA; GSS; PLN; 225 BP. XX AC AB154921; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T07047T, 3' flanking sequence of DE Tos17 insertion in rice strain ND0005. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-225 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 373533f201df87178f30f5c13daba04d. XX FH Key Location/Qualifiers FH FT source 1..225 FT /organism="Oryza sativa Japonica Group" FT /strain="ND0005" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T07047T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 225 BP; 56 A; 50 C; 40 G; 79 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgcg tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt ttttt 225 // ID AB154922; SV 1; linear; genomic DNA; GSS; PLN; 223 BP. XX AC AB154922; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0060_0_601_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0060. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-223 RA Miyao A., Murata K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; a5b2c2d85516285f435d933825979f1b. XX FH Key Location/Qualifiers FH FT source 1..223 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0060" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0060_0_601_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 223 BP; 55 A; 49 C; 40 G; 73 T; 6 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcnna attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgntttttta 120 ctcgattgcc tttcaccctc aatgaatgtt tctgcactgt atcatcatgn aaataaactg 180 ctgnaataca tgcaaatcat cgntgaaatc atgcatttgt gtg 223 // ID AB154923; SV 1; linear; genomic DNA; GSS; PLN; 778 BP. XX AC AB154923; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20447T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2791. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-778 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 4a6e4bb9dde0e94dc35d79bb07411bda. XX FH Key Location/Qualifiers FH FT source 1..778 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2791" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20447T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 778 BP; 232 A; 131 C; 157 G; 246 T; 12 other; ttcaagacgc tgtacctcat tgtgtcccag ctgagagaca ggacaacctg ttgagcagtc 60 aggatcaaaa tgccaccaca ctagatgaag gaaggggtaa gcaaaagctt catcatagtg 120 cacaccaagt cgaagaatgc caaaatgagc agaaagatag gaataaaggt gctactcaaa 180 cacggattag caagttgcca cttgtgttaa ccattcatct gatgagatct ttgttggggc 240 ctgataaggt gatgggacat gtgagcttta aggaaatcct tgatatggga ctgttcatgg 300 accccaggtn ctgactactg catttttttt aacaaaattg taactgttag catttctata 360 cagcaacttc taatgattct attccagttt aatcatttta cttatttgca gtaagctaat 420 agatattatt tttcctaatt tgttcctttg ctttaagaat gcatctcttc tacaatgagt 480 tgctttcana tgacacaagc attgctggtc aatgaataat ctgtatgccc atttttcatg 540 ttctcttgct atgagtatgt cgatgatttt attgtgcatg acaagatgtt gtccanatgc 600 ctcgngtaat attgaccata actaaataag acaagatgta cttattgatg gctatgnggc 660 tccatctgct agnaatttca canattatga tgtttgngac aattgatggt tcacttatta 720 ggaatanggg gattggattt aanaattgat tggggattaa annaatgatg aaatgacc 778 // ID AB154924; SV 1; linear; genomic DNA; GSS; PLN; 182 BP. XX AC AB154924; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0083_0_102_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0083. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-182 RA Miyao A., Murata K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 6a1638c74e16a945572340f012823ac9. XX FH Key Location/Qualifiers FH FT source 1..182 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0083" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0083_0_102_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 182 BP; 33 A; 43 C; 31 G; 58 T; 17 other; ctcctttctt tgcaggatcc acctggttgg catgaantcc ntgcgtactt ccatgggtct 60 gnacttcnna attacttcnn ncgtatggtc gaggataacc tcanngtgca tgtnttttta 120 ctcggttgcc tttcnccctc antnaagtnn ttcngcactg tatcatcatg taaataaact 180 gc 182 // ID AB154925; SV 1; linear; genomic DNA; GSS; PLN; 390 BP. XX AC AB154925; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T31649T, 3' flanking sequence of DE Tos17 insertion in rice strain NG4016. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-390 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; ff734e049c21b3fd3ae5c852cac1d01a. XX FH Key Location/Qualifiers FH FT source 1..390 FT /organism="Oryza sativa Japonica Group" FT /strain="NG4016" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T31649T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 390 BP; 117 A; 74 C; 106 G; 93 T; 0 other; gctactacta gccttcagct tcttggagga agaggccctg agctgagctg agctgagcca 60 gcagcacgag tgaaagactg agagggaggt ctctctcctt caaaaacttc agtctatgga 120 ggtgaaatga aatacgtgtg aggatgggag agaataaagt gtagaggaat cttaggatgg 180 tcagtctctg cttttcgttg ctcttgcaaa accaagagaa ggagcgcaaa tggaagaagg 240 gcaaacaaca cagacaggca gacacagtac ccttgggagg aagaagcact gcggtattta 300 tgcatgtgaa tttgtgaagg gctactacta ctcaacacat ggtattccgt gcaatgtata 360 gctcctactg caaagtacta gatttttttt 390 // ID AB154926; SV 1; linear; genomic DNA; GSS; PLN; 607 BP. XX AC AB154926; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21234T, 3' flanking sequence of DE Tos17 insertion in rice strain NF4001. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-607 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; cb3d55d91d82306e3e2c6359b821646a. XX FH Key Location/Qualifiers FH FT source 1..607 FT /organism="Oryza sativa Japonica Group" FT /strain="NF4001" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21234T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 607 BP; 181 A; 121 C; 141 G; 164 T; 0 other; cccctcaccg ttggaagtgt tgaaacttta ccgatcgata atttggaaac aatagatgaa 60 ggtggcagag aactgtgcac acaggaaaga ggcacaatta tagatggtaa gcttgctaag 120 atggggcaac catgacgacg tccgctcgat ttcaaatttc tggcaaatct caaacaaggg 180 aaataccttc agtacagggc aattcttaat tttcagaacc tttaaactgg agttcaagtt 240 cctgatggaa gtgcaggagc atgtgttcaa gcttggcaat gcaattaaca caagctcctc 300 cagtgaaggg attgagagtt ctgttgcatt cctcattttg atcaacacga gctttacaag 360 taaccctagc ctttctaaag gaagtatttg ccattttcca catttttcta gatgaagtgt 420 ttgcagacag gtaagtgaag aaggaagcca agttggggag gtagatccat tatacccaga 480 tatccgtaga tacttgaggc cgtgatgtgg ttcaagacct tcgagcacct cacttgaagc 540 aagttcagag cttatattac tgtgatgttg taagctttgg gcaccattgg catcaccaac 600 tgacagt 607 // ID AB154927; SV 1; linear; genomic DNA; GSS; PLN; 226 BP. XX AC AB154927; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T06750T, 3' flanking sequence of DE Tos17 insertion in rice strain NC2756. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-226 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; f30d57be6e489e2c125e16fea6a25722. XX FH Key Location/Qualifiers FH FT source 1..226 FT /organism="Oryza sativa Japonica Group" FT /strain="NC2756" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T06750T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 226 BP; 57 A; 56 C; 42 G; 71 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc aaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgagcggcc gctcgagccc tattaa 226 // ID AB154928; SV 1; linear; genomic DNA; GSS; PLN; 373 BP. XX AC AB154928; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0210_0_402_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0210. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-373 RA Miyao A., Shinozuka Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 307dfbd607ecdb9d90ffd2ca18b72879. XX FH Key Location/Qualifiers FH FT source 1..373 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0210" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0210_0_402_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 373 BP; 93 A; 84 C; 61 G; 119 T; 16 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc nnggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc antgaagtgt tnnanncact gtatcatcat gtaaataaac 180 tgctgcaata catgcaaatc atcgatgaaa tcatgcattt tnttttctag caatccacct 240 atnctttnag tcatcaantg tcatcaagng tagtgctttt ctcacctttt gtactcccct 300 ctgnanagcc tatcatgang cctcaggttg agatcatgca caaaaaccgg aattcttttc 360 aagnaagtgt agg 373 // ID AB154929; SV 1; linear; genomic DNA; GSS; PLN; 490 BP. XX AC AB154929; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T34419T, 3' flanking sequence of DE Tos17 insertion in rice strain NG6025. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-490 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 5e5fb71b0a02a420fc3e040727df0456. XX FH Key Location/Qualifiers FH FT source 1..490 FT /organism="Oryza sativa Japonica Group" FT /strain="NG6025" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T34419T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 490 BP; 135 A; 116 C; 90 G; 149 T; 0 other; ctggcaacat gtgtgaacta gagttttctg gtccaatcac tctgacaagc atttcagcac 60 attcctttac cctaatcaag cttttaagca tctttcttaa cttggaccta aacttgtcat 120 ggccaaccaa acgcttagca atggaaatag aactggagcc taagcttcta aggtttcgct 180 tttcagcatt ttctttcaga agcatgtagt caaattcatc caagatgtcc tcagcatcat 240 agacagcatc tttcagttgg tggagtaaag tttgctgatt gcaatcaagt gttctccgcc 300 tttctgcagt gcccaccacc aataaaattt cagttaaaat agtctcgagc tttttaaggt 360 catcctccaa attggactgc cacttgtact gggttgatat atatgactgg accttctcaa 420 ccataagctt gatgacagga gaaactaccc atccaactcc tgtggctagt gataaagtgg 480 ccatgctgct 490 // ID AB154930; SV 1; linear; genomic DNA; GSS; PLN; 351 BP. XX AC AB154930; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0215_0_105_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0215. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-351 RA Miyao A., Shinozuka Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; c071c2082425af51366953ca848fd830. XX FH Key Location/Qualifiers FH FT source 1..351 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0215" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0215_0_105_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 351 BP; 88 A; 84 C; 59 G; 113 T; 7 other; ctcctttctt tgcaggatcc acctgattgg catgaantcc ttgcgtactt ccntgggtct 60 gcacttcaga ataanttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattnnc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttctctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt agngcttttc tcaccttttg tactcccctc 300 tgtacagcct atcatgaagc cncaggttga gatcatgcac aaaaaccgga a 351 // ID AB154931; SV 1; linear; genomic DNA; GSS; PLN; 363 BP. XX AC AB154931; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0217_0_101_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0217. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-363 RA Miyao A., Shinozuka Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; c7321df8e6d4cceba754ed8a46e26788. XX FH Key Location/Qualifiers FH FT source 1..363 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0217" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0217_0_101_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 363 BP; 92 A; 83 C; 59 G; 113 T; 16 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtnt 60 gaacttcaga attactgtca agcgtatggt cgaggataac ctcaaggtgc atgttttttt 120 actcgattgc ctttcaccct caatgaagtg tttctgcact gtatcatcat gtaaataaac 180 tgctgcaata catgcaaatc atcgatgaaa tcatgcattt tnttttcnag caatccacct 240 atgcttttag tcatcaagtg ncancaagtg nagtgcttnt ctnacctttt gnanncccct 300 cngtanancc tatcatgaan ccccaggttg agancatgca caaaaaccgg aattcttttc 360 aat 363 // ID AB154932; SV 1; linear; genomic DNA; GSS; PLN; 583 BP. XX AC AB154932; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF8042_0_701_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF8042. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-583 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; d916f992a696f9f3a4d572777dca37fd. XX FH Key Location/Qualifiers FH FT source 1..583 FT /organism="Oryza sativa Japonica Group" FT /strain="NF8042" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF8042_0_701_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 583 BP; 160 A; 129 C; 153 G; 141 T; 0 other; tttgcatagg ggcgtggata gcacagctgc attactaatc tggagagttt ccagtcgaga 60 ccagatccct gagaccccat gcagatatgg aggtaagctg ggggcgaaga gtactttcaa 120 gtacctaagg tttctaatgg actggatgcc cttgatcgaa gcaagcgact tgcaatttgt 180 aatctctagc ttttccagtg aggtgcagta tcctagctgt aaagacacca attctggact 240 atcctgtatc tctaactttg tgatagaagg gaggcaggac agagagcggg aatggaagct 300 gccctcgact tttctgaccc caagttctac aagtgacaga ggaaacagtt taagatccca 360 tgcagcggac agctcaggat tcatctggat gcataatctt cgaagggagc tgaggtgctg 420 caggccctcc aacacactaa ggtgtggaca ccgcgagatc tgcaaatact ccaaacccga 480 acatgaatgc aattgtacag acttcaaata ttcgccgcta tttaggctta acttcttgag 540 gcagggcagg cctttaggaa agtaggactg caggtttgct gga 583 // ID AB154933; SV 1; linear; genomic DNA; GSS; PLN; 440 BP. XX AC AB154933; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T37188T, 3' flanking sequence of DE Tos17 insertion in rice strain NG8515. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-440 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; f0c6c26f5295789e5dfe58bc04d17f4c. XX FH Key Location/Qualifiers FH FT source 1..440 FT /organism="Oryza sativa Japonica Group" FT /strain="NG8515" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T37188T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 440 BP; 116 A; 102 C; 82 G; 130 T; 10 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttgcag aattacttca agcgtatggt cgaggataac ctcaaggtgc atgttttttt 120 actcgattgc ctttcaccct caatgaagtg tttctgcact gtatcatcat gtaaataaac 180 tgctgcaata catgcaaatc atcgatgaaa tcatgcattt ttttttctan caatccacct 240 atgcttttag tcatcaagng tcatcaagng tagngctttt ctcacctttt gnactcccct 300 ctgtacagcc tatcatgaag cctcaggttg aaatcatgca caaaaaccgg aattcttttc 360 aagtaagngt aggccaacta cttgaccgga aanatgaaag gggtatgaaa gatcanctgn 420 gnaacggcac ctgcccgggc 440 // ID AB154934; SV 1; linear; genomic DNA; GSS; PLN; 420 BP. XX AC AB154934; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0266_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0266. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-420 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 2e880d8ff374f32140bcd431017e64ee. XX FH Key Location/Qualifiers FH FT source 1..420 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0266" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0266_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 420 BP; 101 A; 91 C; 79 G; 118 T; 31 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gnnggataac ctcaaggtgc atgttttntt 120 actcgattgc ctttcaccct caatgaagtg tttctgcacn gtatcatcat gtaaataaac 180 tgctgcaata catgcaaatc atcgatgaaa tcatgcattt ttttttctag caatccacct 240 angcttttag tcancannng ncatcaagng tagngctttt ctcacctttt gtactccccn 300 ctgnacagcc natcatgang ccncaggttn agntcangcn caaaaacngg aattnttttc 360 aggtaagggt aggcnaacta cnngnccggn aagntgngga ggggtatgaa anatcagctg 420 // ID AB154935; SV 1; linear; genomic DNA; GSS; PLN; 164 BP. XX AC AB154935; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T03374T, 3' flanking sequence of DE Tos17 insertion in rice strain NC0459. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-164 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 452d70ac98274bd95b3b21e6379590f3. XX FH Key Location/Qualifiers FH FT source 1..164 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0459" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T03374T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 164 BP; 36 A; 39 C; 32 G; 57 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatac ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatc 164 // ID AB154936; SV 1; linear; genomic DNA; GSS; PLN; 601 BP. XX AC AB154936; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0439_0_402_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0439. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-601 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; df994e5b1f170aa1f04e017d69410574. XX FH Key Location/Qualifiers FH FT source 1..601 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0439" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0439_0_402_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 601 BP; 148 A; 131 C; 126 G; 140 T; 56 other; ctcctttctt ngcaggatcc acctgnttgg catgaaatcc ttgcgtantt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcacng tatcatcatg naaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttcnagc aatccaccta 240 tgctttnagn catcangcgt catcaagtgt agngctttnc tcaccnnttg nactcccctc 300 tgnacagcct ancatgaanc ctcaggtngn gntcatgcac aaaaaccgga ntncttttca 360 agtaagngna ggccaactac ttgaccggaa agntganngg ggnangaacg accnncngtn 420 caanggccnn nnattgaacg agttattgac cgaaaagggg naaaacttcc tgggggtgag 480 ctccaaagng ttggaatagc agcagctncc nggnaaagng cggangtntc natgtntgag 540 gngccancag gtnaccttga tgtnanccan aggctaaang ccgcacgggg canaaagtcc 600 c 601 // ID AB154937; SV 1; linear; genomic DNA; GSS; PLN; 239 BP. XX AC AB154937; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0454_0_402_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0454. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-239 RA Miyao A., Shinozuka Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 0c26d9ea86370cddeedbc7ba7b499c96. XX FH Key Location/Qualifiers FH FT source 1..239 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0454" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0454_0_402_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 239 BP; 61 A; 56 C; 37 G; 80 T; 5 other; ctcctttctt tgcaggatcc acctnattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc naggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcnnatgaaa tcatgcattt ttttttcnag caatccacc 239 // ID AB154938; SV 1; linear; genomic DNA; GSS; PLN; 192 BP. XX AC AB154938; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0464_0_404_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0464. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-192 RA Miyao A., Shinozuka Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 623a696691d2189723f0a215054b8b5c. XX FH Key Location/Qualifiers FH FT source 1..192 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0464" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0464_0_404_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 192 BP; 38 A; 43 C; 32 G; 57 T; 22 other; ctcctttctt tgcaggntcc ncctgattgg catganntcc ttgcgtactt ccatnggtct 60 gaacttcaga attacttcaa gcgtatggnc nnngataacc tcaaggngca tgtnttttna 120 ctcgnttgcn tttcaccctc aatnnagtgt ttcngcncng tancancatg tanataaact 180 ggtgcaatac at 192 // ID AB154939; SV 1; linear; genomic DNA; GSS; PLN; 217 BP. XX AC AB154939; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0466_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0466. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-217 RA Miyao A., Shinozuka Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 6091c9d5888c21c1c01d8ee319db70d8. XX FH Key Location/Qualifiers FH FT source 1..217 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0466" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0466_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 217 BP; 50 A; 51 C; 36 G; 62 T; 18 other; ctcctttctt tgcaggatcc acctgattgg catgnaatcc ttgcgnnctt ccatgggtct 60 gaacttcaga attacttcan gcgtatggtc gcggataacc tcaaggtgca tgttttttta 120 ctcgattgcc nntcaccctc aatgaantnn ntctncnctg tatcntcang naaannaact 180 gctgcaatac atgcaaatca tcgatgaaat cangcat 217 // ID AB154940; SV 1; linear; genomic DNA; GSS; PLN; 186 BP. XX AC AB154940; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0575_0_102_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0575. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-186 RA Miyao A., Shinozuka Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 3f6b5a34ee4ee113cdedac39c79282f5. XX FH Key Location/Qualifiers FH FT source 1..186 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0575" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0575_0_102_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 186 BP; 36 A; 47 C; 32 G; 55 T; 16 other; ctcctttctt tgcaggatcc acctnnttgg cangnaatcc ttgcgtactt ccatgggtct 60 gancttcaga attacntcaa gcgtatggtc gnggataacc tcaaggtgca tgctttttna 120 ctcgattgcc nttcacccnc ntccgnantg tttctgcact nnatcancat gtaaataaac 180 tgctgc 186 // ID AB154941; SV 1; linear; genomic DNA; GSS; PLN; 200 BP. XX AC AB154941; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0603_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0603. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-200 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 0bd459cc6765de33ba7045121dd26ed9. XX FH Key Location/Qualifiers FH FT source 1..200 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0603" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0603_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 200 BP; 46 A; 48 C; 26 G; 45 T; 35 other; cncctttcnt tgcangancn nnctnatngg cntgaaatcc ttncgnactt ccatgggtct 60 gaacttcana cttacttcaa gcgnatggnc gaggataacc ncaangngcn tnntttntta 120 ctcnantgcc ttncacccnc aannanctgn ntcngcactg natcatcatc naaataaact 180 gctgcaanac atgcaaatca 200 // ID AB154942; SV 1; linear; genomic DNA; GSS; PLN; 445 BP. XX AC AB154942; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T36363T, 3' flanking sequence of DE Tos17 insertion in rice strain NG7540. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-445 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; e0bd37bcdf91c5cee7455309d1fbee8f. XX FH Key Location/Qualifiers FH FT source 1..445 FT /organism="Oryza sativa Japonica Group" FT /strain="NG7540" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T36363T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 445 BP; 120 A; 102 C; 82 G; 133 T; 8 other; ctcctttctt tgcangatcc acctgattgg catgaaatcc ttgcagtact tccatgggnc 60 tgaacttcan aattacttca agcgtatggt cgaggataac ctcaaggtgn atgttttttt 120 actcgattgc ctttcaccct caatgaagtg tttctgcact gtatcatcat gtaaataaac 180 tgctgcaata catgcaaatc atcgatgaaa tcatgcattt ttttttctag caatccacct 240 atgcttttag tcatcaagng tcatcaaggg tagggctttt ctcacctttt gtactcccct 300 ctgtacagcc tatcatgaag cctcaggttg anatcatgca caaaaaccgg aattcttttc 360 aagtaagngn aggccaacta cttgaccgga aagatgaaag gggtatgaaa aatcagctgt 420 gcaacggccg ctcgagccct attaa 445 // ID AB154943; SV 1; linear; genomic DNA; GSS; PLN; 310 BP. XX AC AB154943; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T29322T, 3' flanking sequence of DE Tos17 insertion in rice strain NG1549. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-310 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; c8719bd5dacfaa541ba5dd4f4a07632a. XX FH Key Location/Qualifiers FH FT source 1..310 FT /organism="Oryza sativa Japonica Group" FT /strain="NG1549" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T29322T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 310 BP; 74 A; 76 C; 51 G; 106 T; 3 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attactctca agcgtatggt cgaggataac ctcaaggtgc atgttttttt 120 actcgattgc ctttcaccct caatgaagtg tttctgcact gtatcatcat gtaaataaac 180 tgctgcaata catgcaaatc atcgatgaaa tcatgcattt ttttttctag caatccacct 240 atgcttttag tcatcaagng tcatcaagng tagngctttt ctcacctttt gtactcccct 300 ctgtacagcc 310 // ID AB154944; SV 1; linear; genomic DNA; GSS; PLN; 432 BP. XX AC AB154944; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T22656T, 3' flanking sequence of DE Tos17 insertion in rice strain NF6023. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-432 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 5e15c76aa5de9599d93d17f65c778ce1. XX FH Key Location/Qualifiers FH FT source 1..432 FT /organism="Oryza sativa Japonica Group" FT /strain="NF6023" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T22656T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 432 BP; 145 A; 94 C; 89 G; 104 T; 0 other; gtgagatcat ttcaatgctg aatgacaaac tagtattgta ccagtactga gccaagggaa 60 gccaggaact ccatttagtg gggggctgaa gccacagcac aatgtaagta catttccaag 120 ctctggttta cccactcagt ctatctgtct gactggggat gatacgcagt ggtcagattc 180 aaaggaatgc caaatctctt gatcaaatgc taccaaaaat gactagtgaa gattttctca 240 cgatcagaca cagtagattt gggcatgcca tacaaagaag ccactcgatt cagataactt 300 tcagccactt gcagtgcaga aaatgggtgt ttcaatggca aaaaatgtgc atacttagta 360 aatcgatcca ccacgaccaa aatgacatca ctacctttag acacaggaag actctcaata 420 aaatccatag ag 432 // ID AB154945; SV 1; linear; genomic DNA; GSS; PLN; 323 BP. XX AC AB154945; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T17958T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0008. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-323 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 774c6315d065543c28d7dbb024716504. XX FH Key Location/Qualifiers FH FT source 1..323 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0008" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T17958T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 323 BP; 77 A; 77 C; 54 G; 110 T; 5 other; actcctttct ttgcangatc cacctgattg gcatgaaatc ctngcgtact tccatgggtc 60 tgaacttcag taattacttc aagcgtatgg tcgaggataa cctcaaggtg catgtttttt 120 tactcgattg cctttcaccc tcaatgaagn gtttctgcac tgtatcatca tgtaaataaa 180 ctgctgcaat acatgcaaat catcgatgaa atcatgcatt tttttttcta ncaatccacc 240 tatgctttta gtcatcaagt gtcatcaagt gtagngcttt tctcaccttt tgtactcccc 300 tctgtacagc ctatcgggca ggt 323 // ID AB154946; SV 1; linear; genomic DNA; GSS; PLN; 226 BP. XX AC AB154946; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0645_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0645. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-226 RA Miyao A., Murata K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; e10fd144a1ceea50cd9504bb4d07d259. XX FH Key Location/Qualifiers FH FT source 1..226 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0645" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0645_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 226 BP; 56 A; 52 C; 39 G; 76 T; 3 other; ctcctttctt tgcaggatcc acctgntcgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg naaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatntt tttttc 226 // ID AB154947; SV 1; linear; genomic DNA; GSS; PLN; 288 BP. XX AC AB154947; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF8032_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF8032. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-288 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 5e65c250ad57937dd8ff2289c2f383e8. XX FH Key Location/Qualifiers FH FT source 1..288 FT /organism="Oryza sativa Japonica Group" FT /strain="NF8032" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF8032_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 288 BP; 71 A; 66 C; 47 G; 103 T; 1 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tncttttagt catcaagtgt catcaagtgt agtgcttttc tcaccttt 288 // ID AB154948; SV 1; linear; genomic DNA; GSS; PLN; 409 BP. XX AC AB154948; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0654_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0654. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-409 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 0ed266b886849687d3f8725f20a09495. XX FH Key Location/Qualifiers FH FT source 1..409 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0654" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0654_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 409 BP; 98 A; 94 C; 71 G; 114 T; 32 other; ctcctttctt tgcaggntcc acctgattgg catgaaatcc ttgcgtactt ccatgggnct 60 gaacttcana antacttcnn gcgtatggtc nancgataac ctcaaggtgc atgttttttt 120 acncgattgc ctttcaccct caatgaagtg tttctgcact gtatcatcat gtaaataaac 180 tgctgcaata catgcanntc atcgatgaaa tcatgcatnt ttttttctag caatccncct 240 ntgcttttag ncancaagng tcancaagtg nagggctttn ctcacctttn gnacccccct 300 cngtacagcc tancannaag cctcaggttg anatcatgcn caaaaaccgg nattcttttc 360 aagnaagtgt aggccaacta cttgnccgga aagatganag gggtatgaa 409 // ID AB154949; SV 1; linear; genomic DNA; GSS; PLN; 485 BP. XX AC AB154949; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T23040T, 3' flanking sequence of DE Tos17 insertion in rice strain NF6829. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-485 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 86b1ac7be2cca5b5d95ede67e262d845. XX FH Key Location/Qualifiers FH FT source 1..485 FT /organism="Oryza sativa Japonica Group" FT /strain="NF6829" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T23040T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 485 BP; 160 A; 104 C; 92 G; 123 T; 6 other; cctccatcat gtccagagat canaacatgg tctgcatgtc ctttcaccac accactagcg 60 acaattccta caccagcttc agagactagt ttgacgctga ttctggcacc tgggtttgca 120 ttctacagca gaaagaagcg atatagcata agcaagcaaa actgtaaagt gcaacatgca 180 tgatttcaat taaaaaggtt ctctaatatg aaacattaca acaaaaaaat gccaattaat 240 aaggaagtaa atgtgtaagt ggcaaactgg agtcttgcac taaatagtta taagccacca 300 tcatgagact ttttacaaat gagactatac cttaaggtca tggataagtt gtgcgagatc 360 ctcaatagaa atatatatcg tggtgaggag gtgggctaat gagccctaca ccagctgtan 420 aatttctant gactgcaata tcaccaatga ccttgtggcc tggnanctca ccaccttcac 480 cnggt 485 // ID AB154950; SV 1; linear; genomic DNA; GSS; PLN; 299 BP. XX AC AB154950; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0664_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0664. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-299 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 3cdd3d7e0dac860f79189dffaa65d291. XX FH Key Location/Qualifiers FH FT source 1..299 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0664" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0664_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 299 BP; 69 A; 70 C; 48 G; 96 T; 16 other; ctcctttctt tgcaggatcc acctnattgg catgaaatcc ttncgtactt ccatgggtct 60 gaacttcaga antacttcaa gcgtatggtc gnnggataac ctcaaggtgc atgtttnttt 120 actcgattgc ctttcaccct caatgaagtg tttctgcact gtatcatcat gtaaataaac 180 tgctgcaata catgcaaatc atcgntgaaa tcatgcattt ttttttctag nantccaccn 240 aggcttttag tcatnaagtg ncatcaagng nagngctttt cccacctttt gnactcccc 299 // ID AB154951; SV 1; linear; genomic DNA; GSS; PLN; 221 BP. XX AC AB154951; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC0667_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC0667. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-221 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 844f3e6eac7b2371f43730490bd0e8df. XX FH Key Location/Qualifiers FH FT source 1..221 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0667" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC0667_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 221 BP; 58 A; 50 C; 37 G; 71 T; 5 other; ctcctttctt tgcaggatcc acctnattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gnagataacc tcaaggtgca tgtttnttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcacag natcatcatg taaataaact 180 gctgcaanac atgcaaatca tcgatgaaat catgcatttt t 221 // ID AB154952; SV 1; linear; genomic DNA; GSS; PLN; 491 BP. XX AC AB154952; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T35990T, 3' flanking sequence of DE Tos17 insertion in rice strain NG7085. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-491 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; c309151a45985a63b8132c02caf5d7e3. XX FH Key Location/Qualifiers FH FT source 1..491 FT /organism="Oryza sativa Japonica Group" FT /strain="NG7085" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T35990T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 491 BP; 106 A; 126 C; 99 G; 160 T; 0 other; ctttcaacat aaccaagcag ttgtgcacat tatctgttgc cagcattgcc agttcttgcc 60 cggctacctt tgttagcaag caatcaacat ttgtgcttga ggttctatct aaattgagga 120 atgccttcgt cagcctggtt atgagcacct gcatgtgccc aatcttctgc ctgtgtcacc 180 atcaaaggca aggtttctga ggattcctgc cacgagcttc cttagttctt gattgtcatt 240 gttgtctccc aagatctcgg ctaggtttct taacatgaag ggatgtttca atatcttgta 300 ccgcagtgtt atgccgatct ctcctccaat gcttgtgagc ctctgcaaca ccttcagcga 360 tgactttacc aggaccattt gttgtgcctc gctgttcgtc atgtcacctc tgaagcttgt 420 aaatcctatg atcttcggaa tgaggtcagc tactctatcg atttccacac agttattttg 480 accacagcta g 491 // ID AB154953; SV 1; linear; genomic DNA; GSS; PLN; 491 BP. XX AC AB154953; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T37592T, 3' flanking sequence of DE Tos17 insertion in rice strain NG9083. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-491 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 898c5538ae49ed29b39d080224709a31. XX FH Key Location/Qualifiers FH FT source 1..491 FT /organism="Oryza sativa Japonica Group" FT /strain="NG9083" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T37592T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 491 BP; 193 A; 90 C; 63 G; 145 T; 0 other; gctcaatccc acaataatga cagcatgtgt gacaacatcc cgatttgtgg ctagtacatt 60 ccaaacctcc ctaactccac ctctttgcaa cagaaatcca aacgattaac cttcagaaga 120 tgacttcact atttatataa tcttattttg tttcaacatc ggataaaata tctagtcaat 180 tgacaactga catagcaaaa acaaaataaa gaaagctgga aagataatgc aatgtttttt 240 agtcctttac agcaaagtaa ataaaattgc atattcttgc aacagagata aacattatgt 300 ttctataaaa agagatagac actatgtcag tttataggtg caaattcaac atatgtgaaa 360 ctacaaaatg aaaaactgaa cgaaatgtgc ttcttcatct gttaactaac atcataacat 420 tagttaaaat agcacaaaac ttttcttaat tcatgtacaa ttcaaaaact taaagcaggt 480 atgttgtaac t 491 // ID AB154954; SV 1; linear; genomic DNA; GSS; PLN; 350 BP. XX AC AB154954; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T37623T, 3' flanking sequence of DE Tos17 insertion in rice strain NG9040. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-350 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 7a475cd0eef8a5ddcfbadf06953ed8f6. XX FH Key Location/Qualifiers FH FT source 1..350 FT /organism="Oryza sativa Japonica Group" FT /strain="NG9040" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T37623T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 350 BP; 77 A; 74 C; 72 G; 126 T; 1 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccntgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgtttttttc 120 taccacttgc ttgtagagtc agccttttcc tccatcacct tcatcatcct cgctaacggt 180 gagaccacaa ggaaaaaggg acatgtttct tgttcgtttg taagtaagtt tggagagagt 240 tctatcatat gtttatggtc ttttaggatg tttatgaagt taggcttgtt tagagcctct 300 taatggctac tccttttcat gaggtctctt atgaagcctc attttacctg 350 // ID AB154955; SV 1; linear; genomic DNA; GSS; PLN; 496 BP. XX AC AB154955; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T04293T, 3' flanking sequence of DE Tos17 insertion in rice strain NC0639. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-496 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 66ea74f48d5d9ee50ad9043a6f16bae1. XX FH Key Location/Qualifiers FH FT source 1..496 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0639" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T04293T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 496 BP; 133 A; 100 C; 97 G; 151 T; 15 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tngatgaaat catgcatttt tttttntagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt agngcttttn tcacctttng tnctcccctn 300 tgtacagcct atcatgaanc ctnaggttga gattatgcac aaaaaccgga attnttttna 360 agtaagtgta ggccaactac ttgaccggaa agatnagagg ggtntgaaag atcanntgtg 420 caacggcctc caattgaacg aagttattga ccgaaaagtg gcaaaacttt ctggtggtga 480 gctccaaaga gttgga 496 // ID AB154956; SV 1; linear; genomic DNA; GSS; PLN; 491 BP. XX AC AB154956; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T34355T, 3' flanking sequence of DE Tos17 insertion in rice strain NG6026. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-491 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; cbe2daf4b9dae38ddc7f513586119c86. XX FH Key Location/Qualifiers FH FT source 1..491 FT /organism="Oryza sativa Japonica Group" FT /strain="NG6026" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T34355T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 491 BP; 153 A; 98 C; 90 G; 149 T; 1 other; tcaccaacac aaagtaatcc taattgttct ataaggaaga aaggccattg gatactcaca 60 tatttgtcac cagcctgtgc tatatcctaa tgttgtttct caaagttagg atctgcttgt 120 agaatctaaa gctgaacacc ctacttgtta tagctgactg atgttgttat tattgtgtaa 180 tgcatacaca ttaatccaat gaccgcactg tggataacag aggaaacgtt aggatgctgg 240 cctcttcctc acatgactca tcactccatt actcttggcc atctgtctga aagcggacag 300 aggttttanc agctgcgtag ctaccatctc tgcctaaata tgttctttcc atataggcta 360 gttagagctt gcgactgtac tattcgatgg aactcatcaa acaaaagaaa aagttgaaga 420 gaagagattt attttaactg aactagctag ctagtttagg aaaataaaat ttcttgttca 480 gctcaaagaa a 491 // ID AB154957; SV 1; linear; genomic DNA; GSS; PLN; 526 BP. XX AC AB154957; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC2504_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC2504. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-526 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 71cb75bc82bd7e5aa04ce73f56148ed5. XX FH Key Location/Qualifiers FH FT source 1..526 FT /organism="Oryza sativa Japonica Group" FT /strain="NC2504" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC2504_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 526 BP; 135 A; 118 C; 114 G; 124 T; 35 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgn ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgangaaat catgcatttt tttttcnagc aanccaccta 240 ngcttttagt catcaagngn catcaagggt agngctttnc ncaccttttg tacnccccnc 300 tgnacagcct atcatgaagc cncaggttga gancatgcnc aaaaaccgga atncttnnca 360 agtangtgnn ggccaactac ttggaccgga aagatgagag gggtatgaaa gatcagcggn 420 gcaacggccn ccaantganc gaaggtatng accgaaaagn gggaaaactt tctggnggng 480 ngccccaaag agttggnana ncggcagctg ccctgncaaa gcgcgg 526 // ID AB154958; SV 1; linear; genomic DNA; GSS; PLN; 166 BP. XX AC AB154958; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T08668T, 3' flanking sequence of DE Tos17 insertion in rice strain ND3037. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-166 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; f2aca01d3b55803c01cf62a02307cc93. XX FH Key Location/Qualifiers FH FT source 1..166 FT /organism="Oryza sativa Japonica Group" FT /strain="ND3037" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T08668T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 166 BP; 35 A; 40 C; 31 G; 58 T; 2 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcata atnacttcaa gcgtntggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcat 166 // ID AB154959; SV 1; linear; genomic DNA; GSS; PLN; 360 BP. XX AC AB154959; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC2538_0_403_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC2538. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-360 RA Miyao A., Murata K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; d8f6738c5d81f5f0451af117d221d8ec. XX FH Key Location/Qualifiers FH FT source 1..360 FT /organism="Oryza sativa Japonica Group" FT /strain="NC2538" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC2538_0_403_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 360 BP; 87 A; 87 C; 62 G; 110 T; 14 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatcc ncgatgaaat catgcatttt tttttctagc aatccaccta 240 tgctttnagt gctcaagtgt catcaagtgt agggctnttc ncnccttnng nactcccctc 300 ngnacagcct atcangaagc cncaggttga gatcangcnc aaaaaccgga attcttttca 360 // ID AB154960; SV 1; linear; genomic DNA; GSS; PLN; 219 BP. XX AC AB154960; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC2578_0_402_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC2578. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-219 RA Miyao A., Murata K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; f503850d4970ef19fea0dd499fabf180. XX FH Key Location/Qualifiers FH FT source 1..219 FT /organism="Oryza sativa Japonica Group" FT /strain="NC2578" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC2578_0_402_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 219 BP; 57 A; 50 C; 41 G; 69 T; 2 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tancatcatg taaataaact 180 ggctgcaata catgcaaatc agcgatgaaa tcangcatt 219 // ID AB154961; SV 1; linear; genomic DNA; GSS; PLN; 164 BP. XX AC AB154961; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC2579_0_402_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC2579. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-164 RA Miyao A., Murata K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 12d5e552548f0c106ebf4b266cf41475. XX FH Key Location/Qualifiers FH FT source 1..164 FT /organism="Oryza sativa Japonica Group" FT /strain="NC2579" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC2579_0_402_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 164 BP; 35 A; 39 C; 27 G; 56 T; 7 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatngtc gangataacc tcaaggtnca tgttttttta 120 ntcgattgcc tttcaccntc aatnaactgn ttctgcactg tatc 164 // ID AB154962; SV 1; linear; genomic DNA; GSS; PLN; 278 BP. XX AC AB154962; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC2581_0_503_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC2581. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-278 RA Miyao A., Murata K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 6ad7d07f215703bc250b88ae3d8bc206. XX FH Key Location/Qualifiers FH FT source 1..278 FT /organism="Oryza sativa Japonica Group" FT /strain="NC2581" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC2581_0_503_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 278 BP; 64 A; 61 C; 46 G; 81 T; 26 other; ctcctttctt tgcaggatcc acctgnntgg catgaaatcc ttncgtactt ccatgggtct 60 gaacttcaga attactncaa gcgnatggtc gaggataacc tcaaggtgca tgttttttta 120 cncgattgcc tttcaccctc aatgaagtgt ttcnnnactg natcatcatg nnnataaact 180 gctgcaatac ntgcaaanca tcnatgnaat catgcatttt ntnnncnagc aatccaccta 240 tgcnntnagt catcnagtgg catcaagtgt agtgcttt 278 // ID AB154963; SV 1; linear; genomic DNA; GSS; PLN; 166 BP. XX AC AB154963; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T08510T, 3' flanking sequence of DE Tos17 insertion in rice strain ND2049. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-166 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; d593d4063f5edcb0bc1f2b21c360758a. XX FH Key Location/Qualifiers FH FT source 1..166 FT /organism="Oryza sativa Japonica Group" FT /strain="ND2049" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T08510T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 166 BP; 37 A; 40 C; 31 G; 58 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcatatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcat 166 // ID AB154964; SV 1; linear; genomic DNA; GSS; PLN; 366 BP. XX AC AB154964; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T30581T, 3' flanking sequence of DE Tos17 insertion in rice strain NG2576. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-366 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 1dbfb1ece252a284f5f464bb5de525aa. XX FH Key Location/Qualifiers FH FT source 1..366 FT /organism="Oryza sativa Japonica Group" FT /strain="NG2576" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T30581T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 366 BP; 95 A; 86 C; 61 G; 122 T; 2 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gacgtatggt cgaggataac ctcaaggtgc atgttttttt 120 actcgattgc ctttcaccct caatgaagtg tttctgcact gtatcatcat gtaaataaac 180 tgctgcaata catgcaaatc atcgatgaaa tcatgcattt ttttttctag caatccacct 240 atgcttttag tcatcaagng tcatcaagtg tagngctttt ctcacctttt gtactcccct 300 ctgtacagcc tatcatgaag cctcaggttg agatcatgca caaaaaccgg aattcttttc 360 aagtaa 366 // ID AB154965; SV 1; linear; genomic DNA; GSS; PLN; 489 BP. XX AC AB154965; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T23283T, 3' flanking sequence of DE Tos17 insertion in rice strain NG0030. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-489 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 541161a078f53212cd8d4c6228e653b8. XX FH Key Location/Qualifiers FH FT source 1..489 FT /organism="Oryza sativa Japonica Group" FT /strain="NG0030" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T23283T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 489 BP; 166 A; 90 C; 78 G; 131 T; 24 other; atgagtaatg cacaggactt atagtgaact ataggacact ccgaaacaga cttgaaatat 60 agactgcatc caatgttcaa ccattgcgga ggattataac gctgaaacga ccattgctag 120 gaaaaaatca tatcaagatg caataacagg tatttccttg tttgtaagat catatttcag 180 aaactcagga tcagaccatg aagtttatgt tgtattcaag catgaaagga aaaaaaaaat 240 ctttganagg tanttacanc ttncaancan tggaaaggag caacttccag ccatcaaaaa 300 atcgcaaaat tctgcntttn tncaccaaat aacttgtagg cattanttct gtaancttta 360 ntcttttggg canaatttcc ccgttctgct cactaacatt tgtctgangg ncaattccnn 420 anaaaantct ctcttaaaaa atatcnntnt ctganctgca aacctgccct tgaaaaagcn 480 aattagggg 489 // ID AB154966; SV 1; linear; genomic DNA; GSS; PLN; 271 BP. XX AC AB154966; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF3004_0_702_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF3004. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-271 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; eedc4c709723530ac0dd64989e34f15e. XX FH Key Location/Qualifiers FH FT source 1..271 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3004" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF3004_0_702_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 271 BP; 69 A; 60 C; 46 G; 96 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgttatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt a 271 // ID AB154967; SV 2; linear; genomic DNA; GSS; PLN; 393 BP. XX AC AB154967; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 3) XX DE Oryza sativa Japonica Group DNA, clone:NC2634_0_431_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC2634. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-393 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 759aba9b22cf3dd9395180f1779b9b66. XX FH Key Location/Qualifiers FH FT source 1..393 FT /organism="Oryza sativa Japonica Group" FT /strain="NC2634" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC2634_0_431_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 393 BP; 101 A; 87 C; 68 G; 115 T; 22 other; ctcctttctt tgcaggntcc acntgattgg catgaaatcc ttgcgtacnt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gangataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgn tctgcactgt atcatcatgt aaataaactg 180 ctgcaataca tgcaaatcat cgatgaaatc atgcattttt ttttcnagca atccacctat 240 gcttttagtc atcaagtgnc atcaagtgta gngctttncn cacnnttngt acncccctct 300 gtanancnta tcatgaagcc ncaggttgag atcaggcnca aaaaccggaa ttcntttcaa 360 gnaagtgtag gcnaactact tgaccggaaa gat 393 // ID AB154968; SV 1; linear; genomic DNA; GSS; PLN; 491 BP. XX AC AB154968; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T40329T, 3' flanking sequence of DE Tos17 insertion in rice strain NG0443. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-491 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; d306bbb60cccc1c2284d023e0c1ad0a6. XX FH Key Location/Qualifiers FH FT source 1..491 FT /organism="Oryza sativa Japonica Group" FT /strain="NG0443" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T40329T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 491 BP; 137 A; 91 C; 113 G; 150 T; 0 other; caggtaagcg actacatttt gcgcattcat ggagttctaa tgccacaata agctagtgct 60 tgtttcaatc ctatgcttac tttttgctgg gtggaacagc caagatggag gaaattcttg 120 gctcatgttg ggcctggagc tctggtggcc attggcttcc tagatcctag caactgtaag 180 ctcctatctt ttgcctagag cttcatattg ttttgatacg ctcattaaga aaaaaagaaa 240 aagaagaggt tgaggtggta tagctttttt ctgaaacatg atttgacagt ggaaactgac 300 atgcaagctg gagctgactt caagtatgag gtacactgca tagttcttgc ctcttcgtct 360 tggatctgaa ctacttttac gaactaatta accatgtgtc atagattttt gcctgcgcat 420 ggaaagggtg aatgtaacca aggttaatca aataaagacc tggtgaaagg ctcccaatct 480 tggaataaat g 491 // ID AB154969; SV 1; linear; genomic DNA; GSS; PLN; 530 BP. XX AC AB154969; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF3006_0_731_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF3006. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-530 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 439966e564f425d97f728d9677a14d7a. XX FH Key Location/Qualifiers FH FT source 1..530 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3006" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF3006_0_731_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 530 BP; 147 A; 121 C; 102 G; 160 T; 0 other; catattccta tgcctgatta tgttgcaact gcccttccct aatctagaga ttgatgctgt 60 ctgcatatgc actgagtctg aaacaactac acatgtatct gcatttctgc tgtgcaaatg 120 ctatgatata gtcaaaatga tacagttaaa gcttgtgtgt aacaccaatc tttgctattg 180 ttggagaaac atagaaagca gcactattca gttttgggtc ttttggcaag tccaacctga 240 aaggcgaagg aagcatttct tcctagtaag tttgaagagg cttctgcaag gatgcatcac 300 atcactcagc actcagcggg cctcaacact tgcctctcat gctacattgg agtactacat 360 ataaggcaca agatgcgtag gatatgctac tgcctcacaa actgcatttg tacgctgtct 420 tgcttgttct gaaagaagcc gtcatcagcg gtaagcatct cacactgctg taatgtgact 480 gtccatgcat ttgacttcat ctacatcttc tgccacaata cttaaattat 530 // ID AB154970; SV 1; linear; genomic DNA; GSS; PLN; 257 BP. XX AC AB154970; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19662T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2045. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-257 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 0e3cbfd8d39aa5be3ab383a3cd28a3c9. XX FH Key Location/Qualifiers FH FT source 1..257 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2045" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19662T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 257 BP; 66 A; 58 C; 42 G; 88 T; 3 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtanggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttntanc aatccaccta 240 tgcttttagt catcaag 257 // ID AB154971; SV 1; linear; genomic DNA; GSS; PLN; 228 BP. XX AC AB154971; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC2696_0_702_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC2696. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-228 RA Miyao A., Murata K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 3fb138ab50bc843461edf8e6c5c21e23. XX FH Key Location/Qualifiers FH FT source 1..228 FT /organism="Oryza sativa Japonica Group" FT /strain="NC2696" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC2696_0_702_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 228 BP; 57 A; 50 C; 37 G; 80 T; 4 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgnactt ccattggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaangtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgnaatac atgcaaatca tcgatgaaat catgcntttt tttttcta 228 // ID AB154972; SV 1; linear; genomic DNA; GSS; PLN; 280 BP. XX AC AB154972; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC2735_0_503_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC2735. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-280 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; b54a0c40c60f6ab9835b3062b8f9518a. XX FH Key Location/Qualifiers FH FT source 1..280 FT /organism="Oryza sativa Japonica Group" FT /strain="NC2735" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC2735_0_503_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 280 BP; 67 A; 60 C; 47 G; 96 T; 10 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 cncgattgcn tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atnncnntca tcgatgaaat catgcatttt tttttctagn aatcnaccta 240 tgcttttagn catcaagtgt catcaagtgn agtgcttttc 280 // ID AB154973; SV 1; linear; genomic DNA; GSS; PLN; 291 BP. XX AC AB154973; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC2742_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC2742. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-291 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 42e03365887aae8c77658b01845596e3. XX FH Key Location/Qualifiers FH FT source 1..291 FT /organism="Oryza sativa Japonica Group" FT /strain="NC2742" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC2742_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 291 BP; 62 A; 65 C; 49 G; 87 T; 28 other; ctcctttctt tgcaggatcc acctnattgg catgaaatcc ttncgtactt ccatgggtct 60 gnncttcaga attacttcaa gcgtatggtc naggataacc tcaaggtgca tgttttnnta 120 ctcgnnngcn tttcacnctc nntnaagtgt tnctgnactg tatcatcatn nanataaact 180 gctgcaatac atgcaaatca tcgntgaaat catgcantnn ttttgggagc aatccaccna 240 tgcttttagt catncngagg gtcaacgtgt agtgcttttc tcacctnccc g 291 // ID AB154974; SV 1; linear; genomic DNA; GSS; PLN; 220 BP. XX AC AB154974; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC2754_0_101_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC2754. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-220 RA Miyao A., Murata K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 3df5fcf3d5b4d2ce4da6a06a7e382713. XX FH Key Location/Qualifiers FH FT source 1..220 FT /organism="Oryza sativa Japonica Group" FT /strain="NC2754" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC2754_0_101_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 220 BP; 57 A; 49 C; 40 G; 71 T; 3 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggngca tgttttttta 120 cncgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gcggnaatac atgcaaatca tcgatgaaat catgcatttt 220 // ID AB154975; SV 1; linear; genomic DNA; GSS; PLN; 177 BP. XX AC AB154975; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC2786_0_402_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC2786. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-177 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 9337ea0cf953be9a11e3250bdb1c4fc7. XX FH Key Location/Qualifiers FH FT source 1..177 FT /organism="Oryza sativa Japonica Group" FT /strain="NC2786" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC2786_0_402_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 177 BP; 35 A; 42 C; 30 G; 58 T; 12 other; ctcctttctt tgcaggatcc acctgnttgg catgaaatcc ttgcgtactt ccatgggnct 60 gnncttcaga attacttcaa gcgtatggtc gangatnacc tcaangtgca tgttttttta 120 ctcnattgcc tntcnncctc aatgnagtgt ttctgcactg tatcatcatg tacacaa 177 // ID AB154976; SV 1; linear; genomic DNA; GSS; PLN; 219 BP. XX AC AB154976; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NC2795_0_504_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NC2795. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-219 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 38613a23b068525736b5ddd2184bacc7. XX FH Key Location/Qualifiers FH FT source 1..219 FT /organism="Oryza sativa Japonica Group" FT /strain="NC2795" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NC2795_0_504_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 219 BP; 52 A; 50 C; 41 G; 67 T; 9 other; ctcctttctt tgcaggntcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgtttttgta 120 cncgnttgcc tttcaccctc aatgaagtgt ttcngcactg natcatcatg nanataaact 180 gctgcagnac atgcaaatca tcgatgnaat catgcattt 219 // ID AB154977; SV 1; linear; genomic DNA; GSS; PLN; 493 BP. XX AC AB154977; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T31201T, 3' flanking sequence of DE Tos17 insertion in rice strain NG3533. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-493 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 1f897a86c0e5823a81c5e6b4ec2ceeda. XX FH Key Location/Qualifiers FH FT source 1..493 FT /organism="Oryza sativa Japonica Group" FT /strain="NG3533" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T31201T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 493 BP; 119 A; 105 C; 103 G; 162 T; 4 other; tctctgacag tggatgcagt tcgtacgtaa tcttctgctt tgcacttatg ttgtaaattg 60 ttatgtccag ttccgtgtat aagccacaac gggcagtagc tccgacctgc tgtcagtaca 120 gtcagtgact cagtgtcaga agaatgtagt cgctggaaat gaaaatgcag aaattccggc 180 ggccctgaat cagttcgnat ttggctaact cctgaaactg tatggctcag tttgtacatt 240 tctgattttt cgccatgcca acgtgaaaag gtttggcaat tgttgtttta gacaaaggcc 300 atttagccaa ttgtctttcc aaaatgttgt cttctcgcca ttgccaattg tgattttcgt 360 gcaagcttgg aaaaggtgta tatctgtttt gttgcaatgt aaatccatcg aggtccacgg 420 gtctttggnc anctttccat tttatccaag gccntcttaa tcttaaagct cttgaaaaat 480 ttccaatcct ccc 493 // ID AB154978; SV 1; linear; genomic DNA; GSS; PLN; 731 BP. XX AC AB154978; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18875T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1017. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-731 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; bc81281e204c39c353c233a77268ade7. XX FH Key Location/Qualifiers FH FT source 1..731 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1017" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18875T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 731 BP; 194 A; 169 C; 131 G; 236 T; 1 other; gttattacct ctggtgatac tgatattgct ccttcagttc ttgacttagg tatgtctgct 60 tgttccaaca atcggttcac tagttcatct cgctccttct gacgaccgac cacaaactca 120 tcaattgaaa atgagctggt aatacgccat tggagtggtt ctggcaacat gtgtgaacta 180 gagttttctg gtccaatcac tctgacaagc atttcagcac attcctttac cctaatcaag 240 cttttaagca tctttcttaa cttggaccta aacttgtcat ggccaaccaa acgcttagca 300 atggaaatag aactggagcc taagcttcta aggtttcgct tttcagcatt ttctttcaga 360 agcatgtagt caaattcatc caagatgtcc tcagcatcat agacagcatc tttcagttgg 420 tggagtaaag tttgctgatt gcaatcaagt gttctccgcc tttctgcagt gcccaccacc 480 aataaaattt cagttaaaat agtctcgagc tttttaaggt catcctccaa attggactgc 540 cacttgtact gggttgatat atatgactgg accttctcaa ccataagctt gatgacagga 600 gaaactaccc atccaactcc tgtggctagt gataaagtgg ccatgctgct caatatactg 660 tcttggctct tnaatttctc cttacagctt tcaactgatg tacctaatat gcattggtaa 720 gataattatt t 731 // ID AB154979; SV 1; linear; genomic DNA; GSS; PLN; 600 BP. XX AC AB154979; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF9048_0_701_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF9048. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-600 RA Miyao A., Sawaki M., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 3a2b8219f1b0485c6e21d9b0dbc0bddb. XX FH Key Location/Qualifiers FH FT source 1..600 FT /organism="Oryza sativa Japonica Group" FT /strain="NF9048" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF9048_0_701_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 600 BP; 167 A; 157 C; 105 G; 171 T; 0 other; gggtgcatgt cagaaggcct tctcagatca atcttgaatg tcttctgagc attccagata 60 agccgcttga gattgacagg cataggccat gtattatcac cagttgtagc aatctcagtg 120 ccaagctgga accggtcagc ttctagcttc tgaacctctg cctcaaacac atttctaatc 180 tcactgatgg tcttcaaatc ctcagcatgt tgagtcgaca agtagtttgg cttccagttc 240 tcatcatcca gttcataacg aaatacatta tcaaactcag cctttttcat cttcaaggag 300 tccaacttct gtgactcaat ccaaatagca tccatgccat cttctccata taagaactga 360 atgacatctc ccaaagaatt tctaacagta ccatcatact tcaccatgat atcttccata 420 gccttcacaa gtcgtcgctg gatatatcca gtttccgagg tcttcacagc agtatcaatc 480 agaccttctc taccacccat agcatgaaag aaaaattctt gtggtgtcag gcctcgaagg 540 taagagttct ccacaaaccc acgactttca ggaccatagt catttttcgt gaagtggggc 600 // ID AB154980; SV 1; linear; genomic DNA; GSS; PLN; 315 BP. XX AC AB154980; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T31517T, 3' flanking sequence of DE Tos17 insertion in rice strain NG3023. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-315 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; c7d9ff727fd7673448aeb6e29e311f69. XX FH Key Location/Qualifiers FH FT source 1..315 FT /organism="Oryza sativa Japonica Group" FT /strain="NG3023" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T31517T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 315 BP; 84 A; 72 C; 49 G; 109 T; 1 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttagcgtacg ttccatgggt 60 ctgaacttca gaattacttc aagcgtatgg tcgaggataa cctcaaggtg catgtttttt 120 tactcgattg cctttcaccc tcaatgaagt gtttctgcac tgtatcatca tgtaaataaa 180 ctgctgcaat acatgcaaat catcgatgaa atcatgcatt tttttttcta gcaatccacc 240 tatgctttta gtcatcaana aattaattgc gacccatcct gccaacattt ttttcactaa 300 atttggagct aattc 315 // ID AB154981; SV 1; linear; genomic DNA; GSS; PLN; 200 BP. XX AC AB154981; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:ND3029_0_701_1A, 3' flanking DE sequence of Tos17 insertion in rice strain ND3029. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-200 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 16446c342567b799277b1f37ae0dad80. XX FH Key Location/Qualifiers FH FT source 1..200 FT /organism="Oryza sativa Japonica Group" FT /strain="ND3029" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="ND3029_0_701_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 200 BP; 50 A; 45 C; 36 G; 66 T; 3 other; ctcctttctt tgcaggatcc acctgtttgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ntntgnactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca 200 // ID AB154982; SV 1; linear; genomic DNA; GSS; PLN; 338 BP. XX AC AB154982; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18906T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1019. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-338 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 3798a9a18c81bf6ec946bcbed4334279. XX FH Key Location/Qualifiers FH FT source 1..338 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1019" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18906T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 338 BP; 81 A; 78 C; 56 G; 113 T; 10 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaaa attacttcaa gcgtatggnc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttntanc aatccaccta 240 tgcttttagt catcaagngt catcaagngt agggcttttn tcaccttttg tnctcccctn 300 tgtncagcct atcatgaagc ctcaggttga natcatgc 338 // ID AB154983; SV 1; linear; genomic DNA; GSS; PLN; 515 BP. XX AC AB154983; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:ND3052_0_532_1A, 3' flanking DE sequence of Tos17 insertion in rice strain ND3052. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-515 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 6aee1e6dc42f4a1865613c9a5eeef911. XX FH Key Location/Qualifiers FH FT source 1..515 FT /organism="Oryza sativa Japonica Group" FT /strain="ND3052" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="ND3052_0_532_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 515 BP; 140 A; 114 C; 93 G; 144 T; 24 other; ctccnttctt tgcaggatcc acctgnttgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgtattttta 120 ctcnattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctaac aatccnccta 240 tncttttagt cntcaagtgt catcaagngt anngcttttc tnacctttng nacncccctc 300 tgnncagcct atcatgaacc ctcaggttga natcatgccc aaaaaccgga attcttttca 360 agtaantgaa ggccaactac ttgaccggaa agatgaaagg ggtatgaaag atcanctgng 420 caacgncctc caattgaacg aagttattga ccgaaaaagn ggcaaacttt ctgggtggtg 480 anctccaaag agtttgggaa taaacancag ntgcc 515 // ID AB154984; SV 1; linear; genomic DNA; GSS; PLN; 498 BP. XX AC AB154984; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NE6025_0_702_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NE6025. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-498 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; d54dc422b3040a41c19a29f0328771fd. XX FH Key Location/Qualifiers FH FT source 1..498 FT /organism="Oryza sativa Japonica Group" FT /strain="NE6025" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NE6025_0_702_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 498 BP; 144 A; 94 C; 117 G; 143 T; 0 other; gtaatacatt agtatcattt gtttcggtca ccaatgatga taccagcttg gggcattccc 60 taatttgtag catcacaaga gaggtgaatc ctgaaaatcc tctattgact ccagaaaatt 120 ccaggtctgc acattcccaa attcgcaacc actttagaga acgaaggaga ttgcatggaa 180 ttttcagaat ctgttcatcc ctagatgagg ctgtctctac tgaagccaaa ctgctggttg 240 cttctgtttc tgttggttgg ttgattgaca gcaattttat ctgtggacag tccgataata 300 aaaagtattc aagggacagc agatggggaa gcatttgtgt tagccatcta cctactatgc 360 cacacgagga aattttgaga aacctgagag atgggaggac aaggtgatct gtgttaagta 420 tactgttttc atgaacaggc tcggacatgg agtgtggctg gaacaaatta gggcagtgct 480 ctatagacaa atgctcta 498 // ID AB154985; SV 1; linear; genomic DNA; GSS; PLN; 659 BP. XX AC AB154985; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:ND4016_0_402_1A, 3' flanking DE sequence of Tos17 insertion in rice strain ND4016. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-659 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; c62f0194282293bf615736c5e627830f. XX FH Key Location/Qualifiers FH FT source 1..659 FT /organism="Oryza sativa Japonica Group" FT /strain="ND4016" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="ND4016_0_402_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 659 BP; 179 A; 134 C; 111 G; 182 T; 53 other; ctcntttctt tgcaggatcn acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcana attacttcaa gcgtatggtc gaggataacc tcaaggngca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttntanc aatccnccta 240 tgcttttagt catcaagngt catcaagtgt anngctttnc tnaccttttg tactcccntn 300 ngtncagcct atnatgaanc ctcaggttga aatcatgcnc aaaaaccgga attctttnca 360 agnaantgta ggccaactac ttgaccgnaa agatganagg ggtntnaaag atcagctgtg 420 caacggcctc caattgaacn aagttnttgn ccnaaaagng gcaaaacttt ctggngggtg 480 agctccaaaa agttggaata ccagnatctg ccctgcaaan ccgnntgtnt acatgttttn 540 anaagcccnt caagtaatct agnatgttaa ccnaaaaggc ttaaanngct ggnaccantn 600 nattaaaant ncccttggct tagaaacaaa ncagggtaaa tttagtaacc cctncnttt 659 // ID AB154986; SV 1; linear; genomic DNA; GSS; PLN; 332 BP. XX AC AB154986; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:ND4018_0_501_1A, 3' flanking DE sequence of Tos17 insertion in rice strain ND4018. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-332 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 2c201379998f3fac9711389100d64c5a. XX FH Key Location/Qualifiers FH FT source 1..332 FT /organism="Oryza sativa Japonica Group" FT /strain="ND4018" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="ND4018_0_501_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 332 BP; 100 A; 62 C; 68 G; 76 T; 26 other; ccagnatccg aaggcacccg tctancctng gntancacag gggaaatctn ggaatgaagn 60 gagaataatc cnnttgctna ttggaacaat gcaagtggac atgnnganta cttgatagct 120 taattatcnt caaatatctt tctcacttta gtgacngaac ngtnaatacc acactanatg 180 acagtcacat ggacaagtgg atacagcatt aaggaagcta taccatttgn cgaatggggt 240 cataaaggcg gaaaccagan gcnttctcct gctggaacgt ngacattcaa cagaaatagc 300 atgngtggtg tgattnatca acaanctttn ct 332 // ID AB154987; SV 1; linear; genomic DNA; GSS; PLN; 501 BP. XX AC AB154987; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T32248T, 3' flanking sequence of DE Tos17 insertion in rice strain NG4096. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-501 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 608f925eb7a7c2f999abdfab43803320. XX FH Key Location/Qualifiers FH FT source 1..501 FT /organism="Oryza sativa Japonica Group" FT /strain="NG4096" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T32248T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 501 BP; 135 A; 131 C; 83 G; 150 T; 2 other; gatcaaaacc gaatttagtc atgatctttt ccaaaaaccc ccactcaact ctatcatagg 60 ctttatgcat gtccaacttt actgcacata acccctttct tcccttcttc cttttcattg 120 tgtgtataca ttcatatgct aaaagtatat tgtccgttat taatctcccc gggacaaaag 180 cactctgatg gtcactaata atctcaggta aaatttgttt caatctgaaa gataacatct 240 tggatatcac tttatacacc acattgcata aagatatggg tcggaattgt gtcactttgt 300 cggggttatc aactttaggg atcataacaa tggttgcatc gttccacccc accggtactt 360 cggcgcgttg gattgctccc agtacctcct ccactanatc atcctccaac agatgccana 420 atcgcttgaa aaaaatagca tgaaggccat ctggccctgg agcttttacc tgcccgggcg 480 gccgctcgag ccctattaaa c 501 // ID AB154988; SV 1; linear; genomic DNA; GSS; PLN; 203 BP. XX AC AB154988; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:ND4027_0_701_1A, 3' flanking DE sequence of Tos17 insertion in rice strain ND4027. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-203 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; e4ce0278861e1e329026f3f3b379f2c8. XX FH Key Location/Qualifiers FH FT source 1..203 FT /organism="Oryza sativa Japonica Group" FT /strain="ND4027" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="ND4027_0_701_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 203 BP; 66 A; 36 C; 44 G; 55 T; 2 other; aanttaagac tctttgatca aatntgaaaa gatcaaacca tgtacgtgat ccaaattttg 60 gaagaaagca taaagatcct cccaaattat ggatacacac ctgcgtggaa accgcttgtg 120 taatggcgaa ctcagtttct gctttgaact gcttccacag tgacttgcat tgagaaggag 180 tgatgagggt atactttgga gaa 203 // ID AB154989; SV 1; linear; genomic DNA; GSS; PLN; 323 BP. XX AC AB154989; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T32159T, 3' flanking sequence of DE Tos17 insertion in rice strain NG4093. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-323 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 5c1f13caded0a339c760feb589f37334. XX FH Key Location/Qualifiers FH FT source 1..323 FT /organism="Oryza sativa Japonica Group" FT /strain="NG4093" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T32159T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 323 BP; 94 A; 87 C; 46 G; 96 T; 0 other; gtattatcac cagttgtagc aatcgtcagt gccaagctgg aaccggtcag cttctagctt 60 ctgaacctct gcctcaaaca cagttatcta atctcactga tggtcttcaa atcctcagca 120 tgttgagtcg acaagtagtt tggcttccag ttctcatcat ccagttcata acgaaataca 180 ttatcaaact cagccttttt catcttcaag gagtccaact tctgtgactc aatccaaata 240 gcatccatgc catcttctcc atataagaac tgaatgacat ctcccaaaga atttctaaca 300 gtaccatcat acttcaccat gat 323 // ID AB154990; SV 1; linear; genomic DNA; GSS; PLN; 563 BP. XX AC AB154990; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21569T, 3' flanking sequence of DE Tos17 insertion in rice strain NF4042. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-563 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 1df91a75bf61b1cd664809c8d6f4c39c. XX FH Key Location/Qualifiers FH FT source 1..563 FT /organism="Oryza sativa Japonica Group" FT /strain="NF4042" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21569T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 563 BP; 155 A; 99 C; 132 G; 175 T; 2 other; gttccaagct cagcaaggac tcgagcatca ggggttaagg gaaactttcc agtttcactt 60 accaattcct gtgagcagcc tgagctgcaa aatgcattgc gtgcttctaa agaatttgat 120 ggtaatgatg acatggcgtc tgcatatgta gaagccctga acagtggtga ctgtgattat 180 ctgattgacg taatggatag aactggacct gttcttgaga aattgtcacg tgaaacaaca 240 agtgaacttt tgagggttat agctggccag tttctgaata aaaaaatgtt tgatttggca 300 ttgccttggc ttcaacaggt aagttcactt gtagtctatt tatgtttcgc aataactgct 360 aatgccaaga aagcttatac gctttattca tattgtgggt tttattgttg tcctaggtag 420 cggatttgag catgatttat aagccaagtc aactttttgt gtctgtgaga gcacanaagg 480 agttccttgc tttattggag gaagctgcaa caagtggatc tacagagcca gcaatcanaa 540 ttgccattgc acagcttgca ttt 563 // ID AB154991; SV 1; linear; genomic DNA; GSS; PLN; 318 BP. XX AC AB154991; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:ND5049_0_102_1A, 3' flanking DE sequence of Tos17 insertion in rice strain ND5049. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-318 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 6cb516946dc49325939505998c94b5d6. XX FH Key Location/Qualifiers FH FT source 1..318 FT /organism="Oryza sativa Japonica Group" FT /strain="ND5049" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="ND5049_0_102_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 318 BP; 78 A; 74 C; 52 G; 111 T; 3 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt tcatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgctttnagt catcaagtgt catcaagtgt agtgcttttc tnacctttng tactcccctc 300 tgtacagcct atcatgaa 318 // ID AB154992; SV 1; linear; genomic DNA; GSS; PLN; 569 BP. XX AC AB154992; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:ND4038_0_101_1A, 3' flanking DE sequence of Tos17 insertion in rice strain ND4038. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-569 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 7eba26915f431878a0f66674ec622516. XX FH Key Location/Qualifiers FH FT source 1..569 FT /organism="Oryza sativa Japonica Group" FT /strain="ND4038" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="ND4038_0_101_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 569 BP; 164 A; 133 C; 105 G; 166 T; 1 other; ctattttcat aagattgaga gcttttttta ttcttctagc ttgctcgacc tccgctttga 60 agaatagaag actgtcatcc gcgaacaaca gatgcgaaat tcctggtgtt gcccggcaaa 120 tcctgatagg ctggatgagg ccatctgttt tgtatctttc caagatattt gatagaccat 180 ctgcaatcaa gaggaatagg tatggactca atggatcccc ttgccggagt cccctcgttg 240 gagcaaaagg atcaagcaat tctccattaa aacgcacact gtaacgaact gaggttacac 300 ataccatgat ccatctcctc catttgtcac aaaagcccag tctctccatc acaccattca 360 ggaattccca atcaactcgg tcatatgcct tngaaaggtc taactttagg gcacaaaagt 420 tttggttctc ccgtttacaa ttcttaatag aatgaaagca ttcaaaagct attagagcat 480 tatcagtaat gagtcgccct ggaataaaag cactctgagc ttccgatatt atctcttgta 540 acataggtct cattctgtta actaggcat 569 // ID AB154993; SV 1; linear; genomic DNA; GSS; PLN; 403 BP. XX AC AB154993; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:ND4044_0_402_1A, 3' flanking DE sequence of Tos17 insertion in rice strain ND4044. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-403 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 0bbd763a41b5af96f88242b25f0a43b2. XX FH Key Location/Qualifiers FH FT source 1..403 FT /organism="Oryza sativa Japonica Group" FT /strain="ND4044" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="ND4044_0_402_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 403 BP; 104 A; 90 C; 73 G; 127 T; 9 other; ctcctttctt tgcaggatcc acctgtttgg catgaaatcc tngcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggnc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagngt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt agtgcttttc tnaccttttg nactcccctn 300 tgtacagcct atcatgaagc ctcaggttga natcatgcnc aaaaaccgga attctttnca 360 agtaagtgta ggccaactac ttgaccggaa agatgaaagg ggt 403 // ID AB154994; SV 1; linear; genomic DNA; GSS; PLN; 219 BP. XX AC AB154994; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:ND4044_0_404_1A, 3' flanking DE sequence of Tos17 insertion in rice strain ND4044. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-219 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 440c46be2d74236f1700754a06932000. XX FH Key Location/Qualifiers FH FT source 1..219 FT /organism="Oryza sativa Japonica Group" FT /strain="ND4044" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="ND4044_0_404_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 219 BP; 56 A; 49 C; 39 G; 69 T; 6 other; ctcctttctt tgcangatcc acctgnttgg catgaaatcc tggcgtactt ncatgggtct 60 gaacttcaga atnacttcaa gcgtatggnc gaggataacc tcaaggtgca tgtttttnta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcattt 219 // ID AB154995; SV 1; linear; genomic DNA; GSS; PLN; 330 BP. XX AC AB154995; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:ND4045_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain ND4045. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-330 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 484e86808ea6e1d517779a29384cf2dd. XX FH Key Location/Qualifiers FH FT source 1..330 FT /organism="Oryza sativa Japonica Group" FT /strain="ND4045" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="ND4045_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 330 BP; 102 A; 42 C; 84 G; 101 T; 1 other; acaaatnaaa ataataatcc agagttgact tgatttggat ggcaaacgat ttatcctaga 60 gttatgattg atggtatgtg tagtatggtt gcactttggg attaatgcta tagatactag 120 agataaagac tagaattgat tgggtttgaa tctggaagtg atcactgatg gaagaattga 180 tatgaatcag ttttcttttg gttgacaact actgggctgg ctcaggtggt gtggtcaggt 240 tggaccatgg tggaacagta ttgaatctag tactgttctt cttcctctgt caaccacgaa 300 cacagacaga atgagaggta aaaagggaaa 330 // ID AB154996; SV 1; linear; genomic DNA; GSS; PLN; 150 BP. XX AC AB154996; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:ND4047_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain ND4047. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-150 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 2835c4d41633f90ece76e04db1633673. XX FH Key Location/Qualifiers FH FT source 1..150 FT /organism="Oryza sativa Japonica Group" FT /strain="ND4047" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="ND4047_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 150 BP; 33 A; 37 C; 30 G; 48 T; 2 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc naggataacc tcaaggtgca tgttgcttta 120 ctcgantgcc tttcaccctc aatgaagtgt 150 // ID AB154997; SV 1; linear; genomic DNA; GSS; PLN; 297 BP. XX AC AB154997; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18234T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0039. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-297 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 49840a9e8c6ce5ac062668795098bc70. XX FH Key Location/Qualifiers FH FT source 1..297 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0039" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18234T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 297 BP; 88 A; 59 C; 49 G; 91 T; 10 other; ctgggtacct catgaggtna aaanaaacat ggtatttctt attaaataga agacatggan 60 aacaagagcc tacctaagga ccatagaaaa gctccaactc ctttttaacc ttgcctattc 120 ttatttaatt gngntataat agctaatccg tatatgtaat tgaanctgaa tgcanccctg 180 acctaggttt cttatcgact ngcaattctt ctatgaatca ggatacnaac atnaggaatg 240 ctgagatcac catttcattc tttgcctggg gccttcaata catttttggt gccgtca 297 // ID AB154998; SV 1; linear; genomic DNA; GSS; PLN; 491 BP. XX AC AB154998; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T40273T, 3' flanking sequence of DE Tos17 insertion in rice strain NG0417. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-491 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; d4d28a06cd2017225e72b912eaf15c88. XX FH Key Location/Qualifiers FH FT source 1..491 FT /organism="Oryza sativa Japonica Group" FT /strain="NG0417" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T40273T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 491 BP; 134 A; 118 C; 95 G; 144 T; 0 other; tgatcttctc tgcaatatca gccatgctca atttcttatc aaccatcatc tcacgattca 60 gctcaatacg cagcagccat ggagaaattt tatcagggtc aatgtcctca tcaggcattt 120 catagtagga ctggacaaat tcagcatctt cttcaataat ggttcccaga ggatcaggat 180 cataccatat ctcagtagca tgagtcacac tccgcagagt agtgtactct aaggcacatt 240 ggacattctt cgccaattcc ttcttcttgt tcacctcagg ctttaggtga actgacaatg 300 atggagtttt tatattctta gcaacattaa tgatttctct cagcctggga acaccaaggg 360 taacgttctt ggcactgaca ccagcataat ggaaagtatt cagggtcatc tgagttgctg 420 gttctccgat ggactgtgca gctacacatc cgatcatttc acctggagcc actaaagatt 480 gaaggaatct c 491 // ID AB154999; SV 1; linear; genomic DNA; GSS; PLN; 107 BP. XX AC AB154999; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:ND4065_0_403_1A, 3' flanking DE sequence of Tos17 insertion in rice strain ND4065. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-107 RA Miyao A., Murata K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; c225319a99bd8e86e786d8005bdde8f4. XX FH Key Location/Qualifiers FH FT source 1..107 FT /organism="Oryza sativa Japonica Group" FT /strain="ND4065" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="ND4065_0_403_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 107 BP; 33 A; 10 C; 26 G; 38 T; 0 other; acaattgaaa ataataatcc agagttgact tgatttggat ggcaaacgat ttatcctaga 60 gttatgattg atggtatgtg tagtatggtt gcactttggg attaatg 107 // ID AB155000; SV 1; linear; genomic DNA; GSS; PLN; 330 BP. XX AC AB155000; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:ND4513_0_501_1A, 3' flanking DE sequence of Tos17 insertion in rice strain ND4513. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-330 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 3099ae48ed26832f5e82ed546836b757. XX FH Key Location/Qualifiers FH FT source 1..330 FT /organism="Oryza sativa Japonica Group" FT /strain="ND4513" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="ND4513_0_501_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 330 BP; 79 A; 77 C; 56 G; 114 T; 4 other; ctcctttctt tgcaggatcc acctgattgg cntgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt agngcttttc tnaccttttg tactcccctn 300 tgtacagcct atcatgaagc ctcaggttga 330 // ID AB155001; SV 1; linear; genomic DNA; GSS; PLN; 396 BP. XX AC AB155001; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:ND4517_0_701_1A, 3' flanking DE sequence of Tos17 insertion in rice strain ND4517. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-396 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; b9acd710d7875f105d6cdccc1d0dc0af. XX FH Key Location/Qualifiers FH FT source 1..396 FT /organism="Oryza sativa Japonica Group" FT /strain="ND4517" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="ND4517_0_701_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 396 BP; 103 A; 91 C; 67 G; 131 T; 4 other; ctcctttctt tgcaggatcc acctgattgg cnttaaatcc ttgcgtactt ccatgngtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt agtgcttttc tnaccttttg tactcccctc 300 tgtacagcct atcatgaanc ctcaggttga gatcatgcac aaaaaccgga attcttttca 360 agtaagtgta ggccaactac ttgaccggaa agatga 396 // ID AB155002; SV 1; linear; genomic DNA; GSS; PLN; 417 BP. XX AC AB155002; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T09465T, 3' flanking sequence of DE Tos17 insertion in rice strain ND4515. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-417 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; c14ebbcab1a5c3b0fc3ebfbca5ccb1fa. XX FH Key Location/Qualifiers FH FT source 1..417 FT /organism="Oryza sativa Japonica Group" FT /strain="ND4515" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T09465T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 417 BP; 131 A; 69 C; 94 G; 121 T; 2 other; ataacaactc cacgtggcag aattttggag atttttagct aaatttttgg gctgccacgt 60 ggtcctatga caaggttaat tcttaacctt ttccggctgg agggagtagc atatttattc 120 agaatgattc tggcccactg gcccatgtat ctttaagcag agcaatgaaa tactctatat 180 gcttatccag ctgtaaaaga taactgtgtg tgtgtatata tagccaagta ttggtcctta 240 accgcaagtt tttaatcaaa tcatgaagca ttgttggatt ggtggatcag aagaacatnt 300 taaggtggga aaaacaaggn taaagcactc aagtcaatcc acttgttggt ggtatgagaa 360 atatggtgtg aacgaaatag gagggtgttc caaaatcaag ataagaccat accgcaa 417 // ID AB155003; SV 1; linear; genomic DNA; GSS; PLN; 279 BP. XX AC AB155003; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NE2016_0_703_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NE2016. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-279 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 1d3363b17e93b5be9ab94f109d8a37e5. XX FH Key Location/Qualifiers FH FT source 1..279 FT /organism="Oryza sativa Japonica Group" FT /strain="NE2016" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NE2016_0_703_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 279 BP; 70 A; 62 C; 47 G; 100 T; 0 other; ctcctttctt tgcatgatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt agtgctttt 279 // ID AB155004; SV 1; linear; genomic DNA; GSS; PLN; 246 BP. XX AC AB155004; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:ND4530_0_701_1A, 3' flanking DE sequence of Tos17 insertion in rice strain ND4530. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-246 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; d507fbc84a6f165e94ff504640e84a5c. XX FH Key Location/Qualifiers FH FT source 1..246 FT /organism="Oryza sativa Japonica Group" FT /strain="ND4530" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="ND4530_0_701_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 246 BP; 62 A; 57 C; 39 G; 87 T; 1 other; ctcctttctt tgcaggatcc acctgatttn catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttt 246 // ID AB155005; SV 1; linear; genomic DNA; GSS; PLN; 224 BP. XX AC AB155005; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:ND4531_0_102_1A, 3' flanking DE sequence of Tos17 insertion in rice strain ND4531. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-224 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 9412a89785125f965872bf9af9b3272c. XX FH Key Location/Qualifiers FH FT source 1..224 FT /organism="Oryza sativa Japonica Group" FT /strain="ND4531" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="ND4531_0_102_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 224 BP; 56 A; 50 C; 39 G; 76 T; 3 other; ctcctnnctt tgcntgatcc acctgattgg catgaaatcc tggcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttt 224 // ID AB155006; SV 1; linear; genomic DNA; GSS; PLN; 231 BP. XX AC AB155006; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T38554T, 3' flanking sequence of DE Tos17 insertion in rice strain NG0135. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-231 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 0607b25fbb9394d48c447e2250c23045. XX FH Key Location/Qualifiers FH FT source 1..231 FT /organism="Oryza sativa Japonica Group" FT /strain="NG0135" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T38554T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 231 BP; 62 A; 48 C; 52 G; 69 T; 0 other; cttacattga tcactggata attgcaagaa atgaaagtga tgcaatcctg gaggcaaagc 60 agatgtatcc agggaaaaat tataagttag accaagatcc tgatgtgctg gatacatggt 120 tttcatctgg tcttttccca ttgtctgtgc ttggttggcc agacagcaca gctgatctta 180 gttcattcta ccctacttct gtacttgaaa ctggactgga tacctgcccg g 231 // ID AB155007; SV 1; linear; genomic DNA; GSS; PLN; 443 BP. XX AC AB155007; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T09756T, 3' flanking sequence of DE Tos17 insertion in rice strain ND4558. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-443 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 81828f488835ecfaf02b7f5bcd66807e. XX FH Key Location/Qualifiers FH FT source 1..443 FT /organism="Oryza sativa Japonica Group" FT /strain="ND4558" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T09756T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 443 BP; 156 A; 87 C; 91 G; 101 T; 8 other; cactccacag gcagttcnat caatnagaag cgtgcagttt agccnaaaaa ctgcagaaac 60 ngatcgacga tgacaagtac gatgacactg atgattgttc ttcatgtcaa gcaagcactg 120 taagtgctgc accttcaatt cagttcaata gaaaagtata ttatctcttc ccctgcataa 180 cagattttgt aacttacagc caaaagagta tngaagcaag agaactggaa ctgatgctca 240 gattaacatg gccagaattt tatncancaa ggaagaaaat ctggagacca cgggatcaag 300 tgcaagaagg atagcaagat gctcttcaga cattagtcat ctatacaata caaaaatngt 360 agacttgatc aaaagaagct ctgcacttga agaccagctt gcgactgcct tggtgagcaa 420 agaacaggcg gagaagaatt tat 443 // ID AB155008; SV 1; linear; genomic DNA; GSS; PLN; 123 BP. XX AC AB155008; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:ND4562_0_501_1A, 3' flanking DE sequence of Tos17 insertion in rice strain ND4562. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-123 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 5899ae608b39114726dea37bbcf2201c. XX FH Key Location/Qualifiers FH FT source 1..123 FT /organism="Oryza sativa Japonica Group" FT /strain="ND4562" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="ND4562_0_501_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 123 BP; 26 A; 34 C; 23 G; 34 T; 6 other; ctcctttctt tgcaggatcc acctgattgn catgaaatcc ttgcgtactt ccatnggtct 60 gaacttcaga attacttcaa gcgtnnggtc gaggataacc tcaaggtgca tgcccccnta 120 cnc 123 // ID AB155009; SV 1; linear; genomic DNA; GSS; PLN; 692 BP. XX AC AB155009; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:ND5001_0_506_1A, 3' flanking DE sequence of Tos17 insertion in rice strain ND5001. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-692 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; bfa57b803289d86f60a6ebdd9b49d737. XX FH Key Location/Qualifiers FH FT source 1..692 FT /organism="Oryza sativa Japonica Group" FT /strain="ND5001" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="ND5001_0_506_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 692 BP; 189 A; 148 C; 121 G; 187 T; 47 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaantgt ttctgcactg natcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagn catcaagggn catcaagngt agngcttttc tnaccttttg gcncccctct 300 gtncagccta tcatgaagcc tcaggttgag atcatgcnca aaaaccggaa ttcttttcaa 360 gtaagngtag gccaactact tgaccggaaa aaatnaaagg ggtntgaaaa atnanntgtg 420 caacggcctc caattgaacn aantttttgc ccaaaagggg caaaactttc tgggggngag 480 cnccaaaaag ttggaatagc ancanctgcc ctgnaaaacc cggatgttna catgtttnga 540 tgagccctca agttatctng atnttaacca nagcttaatg ctgcnncgag tnataaagcc 600 cngnttaaaa caaaccggnn atttgnaacc ttttttcang ganaaanctn acnaactttt 660 tgaccngana gcttcaanaa atttncccnn ca 692 // ID AB155010; SV 1; linear; genomic DNA; GSS; PLN; 473 BP. XX AC AB155010; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NE1020_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NE1020. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-473 RA Miyao A., Murata K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; cb06c1ef4a4d68845aafd6701575f954. XX FH Key Location/Qualifiers FH FT source 1..473 FT /organism="Oryza sativa Japonica Group" FT /strain="NE1020" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NE1020_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 473 BP; 143 A; 95 C; 93 G; 142 T; 0 other; gtgacttcag ttcttttatt tctttctcca tctgcaatgg acatgacatg aaattttatg 60 gatgtgtgca acagaaacaa caaacttttt ttgtcaagta gaatagtgtg gaaatactcg 120 taatggacaa ggcaaaagtg gcagcaagta agatagacca gatgcacaca aaaacaatag 180 ttttctgcaa attccagtat gagccgtgga ggagaaaaca gggaggtaag aaaagtgaca 240 agtaacttta cctttctgat ttggttgtcc ttttccttca ataatgtttc gagactggaa 300 ctctgaactg gatgccgcaa ctcgctctcc aatctagcaa gttccttttg caagtgctta 360 accagtgctt tatcagacat gaccacatta acctgagcat ttgtaactac ttcctttgca 420 caactcccaa atagcagagt atttcttgat tgctcaatgt ggctactgtc tcg 473 // ID AB155011; SV 1; linear; genomic DNA; GSS; PLN; 264 BP. XX AC AB155011; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF8014_0_701_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF8014. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-264 RA Miyao A., Sawaki M., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; a76cd7b7619c727847fc160f799b58e2. XX FH Key Location/Qualifiers FH FT source 1..264 FT /organism="Oryza sativa Japonica Group" FT /strain="NF8014" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF8014_0_701_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 264 BP; 67 A; 61 C; 43 G; 92 T; 1 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcana attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catc 264 // ID AB155012; SV 1; linear; genomic DNA; GSS; PLN; 608 BP. XX AC AB155012; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T10277T, 3' flanking sequence of DE Tos17 insertion in rice strain ND5070. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-608 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 11fb15aa343b94342d27aff212e1b175. XX FH Key Location/Qualifiers FH FT source 1..608 FT /organism="Oryza sativa Japonica Group" FT /strain="ND5070" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T10277T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 608 BP; 226 A; 109 C; 83 G; 186 T; 4 other; aanacaacna cttatccata ggagtgngtt gtcattcgca ggggtggatg aaatgttttc 60 catagaccga aatattttta ccctataaaa tatttgagga ctaggtaagc tcatgaaaaa 120 acccattacc accaccggtc atccagtgat attatgccat gcataaaaca gaaattttga 180 ccactaaccc ttaagccaaa cagcaccata tatacacttt taatagtccc tagcagtggc 240 agtgaatctg tcacctatat ataactgttt ttacaaattg gctcctgaat attatggaat 300 agcataaata tttcgttcaa acaattaaaa aagttgtact aacatatttg acaatttttt 360 aatattatat tatattttat ccatagcaaa tcattggtat ttttctagtg aaccaaaaag 420 ctcccaacca cagtagactt catcatttca cttattgacg gaataagcga aacaccatat 480 ttgcaaacgg aaaatggttt gtaaataaaa cttttatata catgttctta gccatctaaa 540 agtaaaggtt gaaaaataaa ctacgatgaa aaccntaaaa tcaactccaa atttaaggtt 600 gaaaattt 608 // ID AB155013; SV 1; linear; genomic DNA; GSS; PLN; 228 BP. XX AC AB155013; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:ND6030_0_101_1A, 3' flanking DE sequence of Tos17 insertion in rice strain ND6030. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-228 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 64c62a0b96556ed03291e61c95cd9e15. XX FH Key Location/Qualifiers FH FT source 1..228 FT /organism="Oryza sativa Japonica Group" FT /strain="ND6030" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="ND6030_0_101_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 228 BP; 59 A; 51 C; 38 G; 79 T; 1 other; ctcctttctt ttcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggac gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt tnctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttcta 228 // ID AB155014; SV 1; linear; genomic DNA; GSS; PLN; 489 BP. XX AC AB155014; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T22810T, 3' flanking sequence of DE Tos17 insertion in rice strain NF6043. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-489 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 01f17c10da6bd6e019ce9be0b888ac66. XX FH Key Location/Qualifiers FH FT source 1..489 FT /organism="Oryza sativa Japonica Group" FT /strain="NF6043" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T22810T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 489 BP; 133 A; 119 C; 91 G; 146 T; 0 other; cctacaacat tgtccaaact tgagctatgt atccagtgaa gttttcagcc agctcgttgc 60 tttagagcat ttgtctatag agcactgccc taatttgttc cagccacact ccatgtccga 120 gcctgttcat gaaaacagta tacttaacac agatcacctt gtcctcccat ctctcaggtt 180 tctcaaaatt tcctcgtgtg gcatagtagg tagatggcta acacaaatgc ttccccatct 240 gctgtccctt gaatactttt tattatcgga ctgtccacag ataaaattgc tgtcaatcaa 300 ccaaccaaca gaaacagaag caaccagcag tttggcttca gtagagacag cctcatctag 360 ggatgaacag attctgaaaa ttccatgcaa tctccttcgt tctctaaagt ggttgcgaat 420 ttgggaatgt gcagacctgg aattttctgg agtcaataga ggattttcag gattcacctc 480 tcttgtgat 489 // ID AB155015; SV 1; linear; genomic DNA; GSS; PLN; 395 BP. XX AC AB155015; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NE3511_0_101_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NE3511. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-395 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; e73fd6ed83dd564b9cf01a465d7b8ec3. XX FH Key Location/Qualifiers FH FT source 1..395 FT /organism="Oryza sativa Japonica Group" FT /strain="NE3511" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NE3511_0_101_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 395 BP; 103 A; 90 C; 69 G; 129 T; 4 other; ctcctttctt tgcaggatcc nnctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt ttttctagca atccacctat 240 gcttttagtc atcaagtgtc atcaagtgta gtgcttttct caccttttgt actcccctnt 300 gtacagccta tcatgaancc tcaggttgag atcatgcaca aaaaccggaa ttcttttcaa 360 gtaagtgtag gccaactact tgaccggaaa gatga 395 // ID AB155016; SV 1; linear; genomic DNA; GSS; PLN; 246 BP. XX AC AB155016; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:ND7024_0_404_1A, 3' flanking DE sequence of Tos17 insertion in rice strain ND7024. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-246 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; a3a7d27e67a6d0d5a836e65447e57dbc. XX FH Key Location/Qualifiers FH FT source 1..246 FT /organism="Oryza sativa Japonica Group" FT /strain="ND7024" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="ND7024_0_404_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 246 BP; 60 A; 56 C; 40 G; 88 T; 2 other; ctcctttctt tgcaggatcc acctntttgg catgaaatcc ttgcgtnttt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttt 246 // ID AB155017; SV 1; linear; genomic DNA; GSS; PLN; 503 BP. XX AC AB155017; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T36563T, 3' flanking sequence of DE Tos17 insertion in rice strain NG7528. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-503 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 8cc57dca714d5415064460b0b4ff51db. XX FH Key Location/Qualifiers FH FT source 1..503 FT /organism="Oryza sativa Japonica Group" FT /strain="NG7528" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T36563T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 503 BP; 116 A; 140 C; 109 G; 122 T; 16 other; gaagaaagca ccccttctgc cggtgttgat gaatcatata ttgccgcggc caccgccggg 60 tttcatggct accctcttgc gcagcaagag ttccttgcgt cgccaactgg tttactgagt 120 aaacttgagc ttgtctcaga ggttctgcat atccaggttt gcgtcccagg atcacagtct 180 gcctcggatg gcccactctc cccacagaag cttantttgc ttcgcacgat attacaacgg 240 tgtccctcct ctactggcaa gctgcaccaa caacaggatg tagcatgtag aaaggtaaaa 300 aagagagact ataatcacat atgtcaatgc aggaataggt tctggggtca gcatgcccga 360 gtcaccagca tggtgagaga tgcattggac aaattcaaca ataccatggt tggtttctcc 420 ccctacactc ctttactgcc cgggcggccg ctcgagcccc tattaaaacc nncnntnccn 480 cncnnncttt tnaccntnnn ttc 503 // ID AB155018; SV 1; linear; genomic DNA; GSS; PLN; 272 BP. XX AC AB155018; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF5031_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF5031. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-272 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; d09d777b7a2fbb32399b583a3a440f58. XX FH Key Location/Qualifiers FH FT source 1..272 FT /organism="Oryza sativa Japonica Group" FT /strain="NF5031" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF5031_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 272 BP; 70 A; 60 C; 46 G; 94 T; 2 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcana attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttntagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt ag 272 // ID AB155019; SV 1; linear; genomic DNA; GSS; PLN; 643 BP. XX AC AB155019; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF5025_0_732_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF5025. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-643 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 1e62ebe394a633c7e2c9bb66fce68e98. XX FH Key Location/Qualifiers FH FT source 1..643 FT /organism="Oryza sativa Japonica Group" FT /strain="NF5025" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF5025_0_732_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 643 BP; 179 A; 134 C; 132 G; 198 T; 0 other; ttaacaacac ccccaacaat cctattcact tggaatgaca aaacgcctgt tgcaactgtg 60 ttctctgtga tactgacatt ccagacaaat tgcttttcaa gcaggtcagt aattgcactt 120 ggtatatagt ctttatctga tggattctca tggagcagtg tatcaacgga gcgaccaatg 180 agcctctgag ctagacggcc aaagagaata aatgtggtct ctgctgtctc atctcctgct 240 attatattca gcttgaatct gcaacaacca tccagatatc aattgtcata caacaacaat 300 aactccctat tgcttaggat cttttggttt agaagaacta accttggtga ggctgaaaca 360 ataggtgggc atgttgggtc tccacacctg tatgctcttc catagggctt tgcagttttt 420 ttgcagatat cacaggctgt ataccaccag gaggcctgca tgcagaactt cttgataaca 480 acagtaacct ggaactcatg tttctgtggt agaaagtatt tgtcagttag catattccag 540 tgtggagata tgtagatttt tactacaaaa ctgggtcaag caaggtttta ccttgaattt 600 aaatgggtgg agctccttaa gttgagcaac tgttttctgt tca 643 // ID AB155020; SV 1; linear; genomic DNA; GSS; PLN; 431 BP. XX AC AB155020; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20365T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2767. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-431 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; dffb70b2ee6ed75c38bd6e6a195bda7e. XX FH Key Location/Qualifiers FH FT source 1..431 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2767" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20365T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 431 BP; 117 A; 102 C; 80 G; 132 T; 0 other; agaacatcct aataactttt gattgtaaca tttccctttc cttttgcagg caaagggagc 60 gggttcagtt ctcagtttcc taactggttc attagctctc tcaaaacatg ttgttgagac 120 cacaaagtac ttcaatgtaa cagttagctt tggtgagcat tcagacaaac ccatatttct 180 gcttctctca atgttctgct gtcatacatc atcaggagtc attgttttta agaaaccatg 240 atgaaactgc gccaatataa ccgatccagt catttcttat caaagttttc agttcctgct 300 tgctaatcca aattaaaact aaatgcagga agtgtgaaat cgctcattag cctgccatgc 360 ttcatgtcac acgccagcat cccttctgcg gttcgcgagg agcgcggcct gacagacgat 420 ctagtcagga t 431 // ID AB155021; SV 2; linear; genomic DNA; GSS; PLN; 245 BP. XX AC AB155021; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 3) XX DE Oryza sativa Japonica Group DNA, clone:NE0034_0_102_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NE0034. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-245 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 6a83f9b9dfa12d0ae3ed10b296610509. XX FH Key Location/Qualifiers FH FT source 1..245 FT /organism="Oryza sativa Japonica Group" FT /strain="NE0034" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NE0034_0_102_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 245 BP; 61 A; 55 C; 42 G; 86 T; 1 other; tcctttcttt gcaggatcna cctgattggc atggaatcct tgcgtacttc catgggtctg 60 aacttcagaa ttacttcaag cgtatggtcg aggataacct caaggtgcat gtttttttac 120 tcgattgcct ttcaccctca atgaagtgtt tctgcactgt atcatcatgt aaataaactg 180 ctgcaataca tgcaaatcat cgatgaaatc atgcattttt ttttctagca atccacctat 240 gcttt 245 // ID AB155022; SV 1; linear; genomic DNA; GSS; PLN; 228 BP. XX AC AB155022; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NE8008_0_701_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NE8008. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-228 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; eac257f0b0607529c9da59cb8bdd9caf. XX FH Key Location/Qualifiers FH FT source 1..228 FT /organism="Oryza sativa Japonica Group" FT /strain="NE8008" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NE8008_0_701_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 228 BP; 58 A; 50 C; 39 G; 81 T; 0 other; ctcctttctt tgcaggattc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttcta 228 // ID AB155023; SV 1; linear; genomic DNA; GSS; PLN; 279 BP. XX AC AB155023; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NE2047_0_702_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NE2047. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-279 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 3975771fdb64f076b2fed5df8f078601. XX FH Key Location/Qualifiers FH FT source 1..279 FT /organism="Oryza sativa Japonica Group" FT /strain="NE2047" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NE2047_0_702_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 279 BP; 70 A; 64 C; 46 G; 99 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtcctt ccatgggtct 60 gaacttcaaa attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt actgctttt 279 // ID AB155024; SV 1; linear; genomic DNA; GSS; PLN; 235 BP. XX AC AB155024; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NE3035_0_402_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NE3035. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-235 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 07007dfec582e99fae02f1d3e17dc885. XX FH Key Location/Qualifiers FH FT source 1..235 FT /organism="Oryza sativa Japonica Group" FT /strain="NE3035" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NE3035_0_402_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 235 BP; 60 A; 53 C; 40 G; 82 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatta tcgatgaaat catgcatttt tttttcttgc aaacc 235 // ID AB155025; SV 1; linear; genomic DNA; GSS; PLN; 461 BP. XX AC AB155025; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T31411T, 3' flanking sequence of DE Tos17 insertion in rice strain NG3583. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-461 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; aa439bf2ed2cab5862c8e1f87b8c8f09. XX FH Key Location/Qualifiers FH FT source 1..461 FT /organism="Oryza sativa Japonica Group" FT /strain="NG3583" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T31411T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 461 BP; 126 A; 129 C; 81 G; 123 T; 2 other; aaaagttcat cccatatatt ctcactgagc cgttccaaat cataagttct aagccctcag 60 atgtttgcct cgcacaacac aacgaaccgc tgtcagttaa ccaaaaaagc atgccctgat 120 gaatggtgag gctattcaac ccgctgtgct cataatcaca cctcaccgac cctttgctcc 180 agccaccaat cttaaccgat ctgagccaga ttgcagttat agcttcttct ccgagctttg 240 ggggatgttg ncgcgcaaga gctattgtca catcgaatgg tgggttcccg ataaaatatc 300 cctgatgaat aatctcctca gcttcgccaa caaaccatcg cttctcngtg ttaacattcc 360 aaaggctgat tatatttgcc tcccttagta agaaccagct accattggga gtacaacaca 420 tcgtcaatat caatctccat attctccctg tagaaggtgc t 461 // ID AB155026; SV 1; linear; genomic DNA; GSS; PLN; 489 BP. XX AC AB155026; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T34482T, 3' flanking sequence of DE Tos17 insertion in rice strain NG6056. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-489 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 8dc3e02ba8d8974a580e8401ce19386f. XX FH Key Location/Qualifiers FH FT source 1..489 FT /organism="Oryza sativa Japonica Group" FT /strain="NG6056" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T34482T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 489 BP; 128 A; 115 C; 108 G; 138 T; 0 other; tcttggaccg atgattggga ggacaccaag atttgaacta ccgggtggtt ccatctgtag 60 caagaactca atggcatgtt caagttccat atgtcgattg aacatacact tgtccaaaaa 120 caaatgcgtg ctgtaaggtt ggcgatacat aggacggtac tgcacaagaa attcaatgaa 180 ctccttcatg tcagctatga ggatttctag cctatgaacc atcttctgca aatcttctac 240 ctccccacca ctgaataccg tttgttgagg tttactagtt gggaaacgaa gacgcttagc 300 aggattgaat ctggacaaag caaatgaatg gctcacctcg tcatctttgg ccttgtcttg 360 aatagctcgg tatctgaagt tatcgagaat gtagcagcct ttcaacatct catctctaag 420 gatcttgagc tgctggagca tcccttggtt tctgacgtgc cgcccttcag cctcctcgac 480 gatggtact 489 // ID AB155027; SV 1; linear; genomic DNA; GSS; PLN; 493 BP. XX AC AB155027; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20378T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2779. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-493 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 380c98ba7a202432464b2d1f4ce9abdc. XX FH Key Location/Qualifiers FH FT source 1..493 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2779" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20378T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 493 BP; 143 A; 88 C; 105 G; 132 T; 25 other; ttaattatgc agcatcaaga atttggaaat aatctctgtt tgacttgcat tccttagcta 60 atgggctgtg cagctagcag ggagaagaat ggaaggggag aaacatgcct cggtggctct 120 gtaggatgga ctgcctggag ggctgcgcca tcaggtttct tgagttcatg actgctctga 180 ttagcataan tggtcgccat ttcatatttt ccacttatgc tcagtcgccc acttctctnn 240 agtaacagaa aataagaaat ggcgagcatc atgtagggtc gtggttcaaa aagtacaaat 300 aaaattttct ccttcttaat acaatgtttg gttggcaaan ccggcccggc naaaaaaaag 360 ttttttttta aanggagggn aaaacntttc cntcggatat nnntncacat ggacannnna 420 ntacggaccg accnaanntt tttacngggc tagtctaaan aactaaaccc gtaaaaaaan 480 anagttaagt gat 493 // ID AB155028; SV 1; linear; genomic DNA; GSS; PLN; 493 BP. XX AC AB155028; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T32413T, 3' flanking sequence of DE Tos17 insertion in rice strain NG4556. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-493 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 821c25288b27ead66b3403b88d69ec69. XX FH Key Location/Qualifiers FH FT source 1..493 FT /organism="Oryza sativa Japonica Group" FT /strain="NG4556" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T32413T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 493 BP; 117 A; 107 C; 111 G; 158 T; 0 other; cttgctacat atgcctgccc caaggacatg cctggaggtg cctgagtgat atcttccaca 60 aaattgccag gaacggtgaa aatggcagca aaggcgacgg tggcaataag cactgcaacc 120 acagtattgg agttgatggc attgtttaga ccaccaatgt ggagtttttc gagtctcttc 180 ttgattttct ggacttgcat cttggtctgt ttagtttgct tgatctggga ctggacatca 240 tgtctgatat cactaactgt ttgcttaagt tgctttgccg gattgggtgg atgtacttgc 300 tcttttgcag ttactccacc agcctctctc aagatgttaa caagttcttc attgttgagt 360 tgctcagcaa tggcaagagc ggtgtgccct gatctgttaa ctgcatttac ttcaattccc 420 tcaactgata gtagagtctg cactatctgt aaggaattac acatatatca gtcaaagcaa 480 accttcttgt ttc 493 // ID AB155029; SV 1; linear; genomic DNA; GSS; PLN; 272 BP. XX AC AB155029; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NE4515_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NE4515. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-272 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; b77d8a4ccdd1248514ac5e1ae36e4425. XX FH Key Location/Qualifiers FH FT source 1..272 FT /organism="Oryza sativa Japonica Group" FT /strain="NE4515" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NE4515_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 272 BP; 71 A; 61 C; 47 G; 93 T; 0 other; ctcctatctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catcaagtgt ag 272 // ID AB155030; SV 1; linear; genomic DNA; GSS; PLN; 246 BP. XX AC AB155030; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NE4523_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NE4523. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-246 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; e15ce5abd647ad5b240148e3830942cc. XX FH Key Location/Qualifiers FH FT source 1..246 FT /organism="Oryza sativa Japonica Group" FT /strain="NE4523" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NE4523_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 246 BP; 62 A; 58 C; 41 G; 85 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttctttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttt 246 // ID AB155031; SV 1; linear; genomic DNA; GSS; PLN; 212 BP. XX AC AB155031; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T39367T, 3' flanking sequence of DE Tos17 insertion in rice strain NG0209. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-212 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 1fa4a179ba0ab8301850bfce1a3e9ff3. XX FH Key Location/Qualifiers FH FT source 1..212 FT /organism="Oryza sativa Japonica Group" FT /strain="NG0209" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T39367T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 212 BP; 55 A; 43 C; 53 G; 61 T; 0 other; aaaagagcct ctcgggtaac agacgtcgga gtcattgtga ctgaaccagc cgtagtggcc 60 tttcctacat catgctgctg ctactgatca gggcaaaagt tttcgtagga tttttggact 120 ttcatccaca aagtctcttt ctaggattcg aatgattaaa atgggggcca tggttgcgga 180 ttggatttta ggagtatatc ccataggaaa cc 212 // ID AB155032; SV 1; linear; genomic DNA; GSS; PLN; 221 BP. XX AC AB155032; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NE5045_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NE5045. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-221 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 27e3f1324fee6b5f806b632cbb2e9344. XX FH Key Location/Qualifiers FH FT source 1..221 FT /organism="Oryza sativa Japonica Group" FT /strain="NE5045" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NE5045_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 221 BP; 59 A; 51 C; 39 G; 72 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtga ttctgcactg tatcatcatg taaataaaca 180 tgctgcaata catgcaaatc atcgatgaaa tcatgcatct t 221 // ID AB155033; SV 1; linear; genomic DNA; GSS; PLN; 298 BP. XX AC AB155033; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NE5046_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NE5046. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-298 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; ca7d5f3fc2303b22e87ef6214563a11b. XX FH Key Location/Qualifiers FH FT source 1..298 FT /organism="Oryza sativa Japonica Group" FT /strain="NE5046" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NE5046_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 298 BP; 75 A; 70 C; 52 G; 101 T; 0 other; ctcctttctt tgcaggatct acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgctttaagt catcaagggt catcaagggt agtgctttac tcacctttgg aactcccc 298 // ID AB155034; SV 1; linear; genomic DNA; GSS; PLN; 358 BP. XX AC AB155034; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NE6006_0_103_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NE6006. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-358 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; eef472f40a71f1e2fcec8aaa4257f816. XX FH Key Location/Qualifiers FH FT source 1..358 FT /organism="Oryza sativa Japonica Group" FT /strain="NE6006" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NE6006_0_103_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 358 BP; 93 A; 85 C; 62 G; 118 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcattgt tttttttagc aatccaccta 240 tgctttaagt catcaagtgt catcaagtgt agggctatcc tcaccttttg aactcccctc 300 tgtacagcct atcatgaagc ctcaggttga gatcatgcac aaaaaccgga attctttt 358 // ID AB155035; SV 1; linear; genomic DNA; GSS; PLN; 693 BP. XX AC AB155035; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18882T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1017. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-693 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 914ea432ba71ea1e11957fb0a26c471a. XX FH Key Location/Qualifiers FH FT source 1..693 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1017" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18882T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 693 BP; 218 A; 132 C; 135 G; 207 T; 1 other; attcattcat tagagagctc actgccatga tccgagnatg acatacacaa atacatggcc 60 gcaagtcttc tgcaaaatct atgcttgcat gctcaatcca agctcagcag ctcagacttg 120 acagaactat ctcattcctt gcgaaaggtg agcctgctca ttcaacctac aagctcaaaa 180 ttagaggctg tgcaatctat tgtgcttgca atctttcttt ttccttaact tgctatggaa 240 tgaccttttt ttaataaaaa ggaataacct tatttttctt tgttagatag taacttttta 300 caatgttgca taaccatgcc tatggtgata tgtgcagttt gttagcacag tccaaagact 360 actcagagct atattgcagg actgacgaaa agagtagaaa acgaataaag ataagtggaa 420 ttcttgtttt caataattgt aacttataaa tgacttgctg tttcaatttc aggttttgga 480 aagaataact gacacaacag ttgcaacaga acttgaagtc cttattggcc ttagttcaca 540 aatatgccat gtcgttcctg aagactttgc ccgagaacta gagcatgatc agatgaagga 600 aagatttgtg aagaaactag ttgaggcact gaatgcaaat gtgaaaccta ctgtccactg 660 tcccaggatc aggagggtga tagttgagca agt 693 // ID AB155036; SV 1; linear; genomic DNA; GSS; PLN; 187 BP. XX AC AB155036; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NE7018_0_402_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NE7018. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-187 RA Miyao A., Tanaka K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 9bd8d41b16176b7b3601807e752a7f37. XX FH Key Location/Qualifiers FH FT source 1..187 FT /organism="Oryza sativa Japonica Group" FT /strain="NE7018" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NE7018_0_402_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 187 BP; 47 A; 44 C; 35 G; 61 T; 0 other; ctcctttctt tgcaggatcc acctgatagg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt atctgcactg tatcatcatg taaataaact 180 gctgcaa 187 // ID AB155037; SV 2; linear; genomic DNA; GSS; PLN; 337 BP. XX AC AB155037; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 3) XX DE Oryza sativa Japonica Group DNA, clone:T31729T, 3' flanking sequence of DE Tos17 insertion in rice strain NG3547. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-337 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 0e51910f8b69709e7995973768745d50. XX FH Key Location/Qualifiers FH FT source 1..337 FT /organism="Oryza sativa Japonica Group" FT /strain="NG3547" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T31729T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 337 BP; 98 A; 51 C; 49 G; 132 T; 7 other; atcacacctt cngattttgc tgtagctgtt aatgatgtta taggtaacta ctactttgct 60 tttttttcca ttgtgaattn ntaatatgcg tatatttcnt ctgcaaagaa ttttctgaag 120 tttaaactga gattgcctaa ataattatta ctaataggtg atggactcat atctagctct 180 ggatcaaggg atttgaacca tatanagnaa ctgatattat ataacattct ttcacaacag 240 gcaattgttn tatgctttag gttgcattgc ttgcaatatg acacctgctg agataatcta 300 cattattttt atccatctat gttaaattaa tctttta 337 // ID AB155038; SV 1; linear; genomic DNA; GSS; PLN; 501 BP. XX AC AB155038; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T36502T, 3' flanking sequence of DE Tos17 insertion in rice strain NG7586. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-501 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 43786198588a84d26b959f639cb71c1e. XX FH Key Location/Qualifiers FH FT source 1..501 FT /organism="Oryza sativa Japonica Group" FT /strain="NG7586" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T36502T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 501 BP; 134 A; 95 C; 127 G; 145 T; 0 other; ggtaccacgg cctccacttc ggagaacagg gtgtgtgttc ggcacaactt tgtacttgct 60 ttcttatatg agttgaagca tgtaacaata gctgcaccta aagctacttc atttttttgc 120 agaaagagag ttgctattgt tggcagtggc ccagctggtc tagctgctgc agaccaactg 180 aacaaaatgg gccatttcgt gactgtcttt gaacgtgctg accgtattgg aggactgatg 240 atgtatgggg ttccaaatat gaaggctgac aaagagggca ttgttcagcg acgtgtcgag 300 ttgatggcta aggagggggt tcaattcatt gtgaatgccc atgttggaag tgacccttta 360 tactccgttg aaaagctccg ctctgagaat gatgccatta ttttggcctg tggagctaca 420 aagccaaagt gagttaatac aaaaacgaaa aaaagaagag tttgtaactc tagtttacat 480 ctttcttggc accagttttt a 501 // ID AB155039; SV 1; linear; genomic DNA; GSS; PLN; 264 BP. XX AC AB155039; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NE8534_0_103_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NE8534. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-264 RA Miyao A., Onosato K., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 67079f0c672d03e4daf19673ef9b5e00. XX FH Key Location/Qualifiers FH FT source 1..264 FT /organism="Oryza sativa Japonica Group" FT /strain="NE8534" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NE8534_0_103_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 264 BP; 66 A; 60 C; 44 G; 91 T; 3 other; ctcctttctt tgcaggatcc acnttnttgg catgaaatcc ttgcgtactt ccangggtct 60 gaacttcaga attgcttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgctttaagt catcaagtgt catc 264 // ID AB155040; SV 1; linear; genomic DNA; GSS; PLN; 480 BP. XX AC AB155040; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T39769T, 3' flanking sequence of DE Tos17 insertion in rice strain NG0333. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-480 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 9f9050015b3133b7d8a09545cdb8966e. XX FH Key Location/Qualifiers FH FT source 1..480 FT /organism="Oryza sativa Japonica Group" FT /strain="NG0333" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T39769T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 480 BP; 122 A; 77 C; 128 G; 153 T; 0 other; cttggcactg atcatggttg ctctccttct ttcttgtctg aaattttttg tataaggtag 60 tattcagcta tgagatatgt ttgggttgtg gatgatgaag tggtcgtttc taaaatgttg 120 gatttatagg gatgagggga aagagaggaa tgtggtttag gtgcaactat cagtgcaagc 180 tggcaaagga cacaaggcca tgagctcaga acatgcaatg tttcaaggcc aagctatgtg 240 gttctgattg gatttctcta gggccatcag ttaagtactt gtttgagcca taccataaaa 300 acagtgtgtg gatgcatggg caccacattg tgtggccaca ctgacctgtt ttggtgtcca 360 agatgcattg cctcatgagg accacatgta agttgggggg tccaacatgt cagggtcagt 420 gccatttctg agtctgcaat gagatatcaa atatattagg tatttgattg tatcatgttt 480 // ID AB155041; SV 1; linear; genomic DNA; GSS; PLN; 315 BP. XX AC AB155041; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18030T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0015. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-315 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 15416a10510329624e5720c04dbb5b6f. XX FH Key Location/Qualifiers FH FT source 1..315 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0015" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18030T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 315 BP; 115 A; 56 C; 52 G; 90 T; 2 other; cttcttctct ggctaaatca tagaaatact aatatcaggt ncacacaaga agaacagaag 60 gaaccagaga ggaaaatgat ataaaaaaca tcacatatga agcacgcttc tatattacca 120 gaactaattc catatcagcc attggaatgt tcttgaaatg ctttacaaat attcctcgat 180 ccggcttggc ttctgtgctt gatttccttt taatttacaa tcgaaacaag aaagtattca 240 gtgtgccaag ccagaanatt taaaaatgtt acattactta ggatggttag atgaatacat 300 gtataacaga gcgat 315 // ID AB155042; SV 1; linear; genomic DNA; GSS; PLN; 688 BP. XX AC AB155042; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T09332T, 3' flanking sequence of DE Tos17 insertion in rice strain ND4067. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-688 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 2a2c436ff8f06cabaed1a18ea387a348. XX FH Key Location/Qualifiers FH FT source 1..688 FT /organism="Oryza sativa Japonica Group" FT /strain="ND4067" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T09332T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 688 BP; 150 A; 149 C; 128 G; 227 T; 34 other; ctcctttctt tgcaggatcc acntgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcagt aattnacttc aagcgtatgg tcgaggataa cctcaaggtg catgtttntt 120 tactcgattg cctttcaccc tcaatgaagt gtttctgcac tgtatcatca tgtaaataaa 180 ctgctgcaat acatgcaaat catcgatgaa atcatgcatt tttttttcta gcaatccncc 240 tatgctttta gtcatcaagt gtcatcaagt gtagngcttt tctnaccttt ggtactcccc 300 tntgtacagc ctatcatgaa gcctcaggtt ganatcatgc ncaaaaaccg gaattctttt 360 caagtaagtg taggccaact acttgaccgg aaagatgana ggggtatgaa anatcggttg 420 catttgtcat cgtcnactat ttctngcatt ttcatgattg gaggattttg ccatcntcgt 480 tnatgcnctt ntacgtcgtc atcgtnggct ngttttcatc gccaccgacn gatattctcg 540 ccttnacggc tggctaataa tgtccccgcn taatgggcgt tttcancntt tttnaccagc 600 tgnntngtnn gtctncgact gattattttg tcccccatgg gttacaaaaa cttttgncgc 660 tattgctggg ggngccttta attnttta 688 // ID AB155043; SV 1; linear; genomic DNA; GSS; PLN; 735 BP. XX AC AB155043; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T17953T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0008. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-735 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 7261af47e7fad9a95199564da7dcb418. XX FH Key Location/Qualifiers FH FT source 1..735 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0008" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T17953T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 735 BP; 193 A; 146 C; 144 G; 240 T; 12 other; ggaatcaggt cagttgatat gcttgtttgg ctttaaaatt tctagtttat tatacaattt 60 cacttttaat tcgtcccatc ttgaatagta gtctgaaaat ccatatgccg gttcatgatt 120 tattaactaa attcattgat tctttctctt cttgctttac gtggtatttt gtcctactac 180 tgtctccttt ctgacttttt ttggctgatt aactaagatc aaatgattac actgaagtat 240 gttatgtttg ttttgcaaca gagatacctt gtaataacaa gttcaccact tcttggaggc 300 cttgcagcaa tgcgtgactc ggaagtggat tacacagttg gggctattct ggctaaccct 360 cagaatgaaa gcccctggag atacctcaaa ggcctgtaca agggtgaaaa taacttgctg 420 atggctgatg agcgcatctc tgatgtttgt ctcaaggtcc tgaaacatga ttcgacctgc 480 gtatttgctt tgagcttgct gctcgatctt cttcaaattg gtttacaacc ttcagatgaa 540 ctcaaaggaa ctatcgaagc aataaagaac tctgatcctg aagcagatga agcantanat 600 gctgatcttg cgactgcaat ctgctcaata ttgcanagat gtgatcccct gcggataaat 660 tactggtcct ggtacaggac cnctatttnt tctnaaacct gaancatgca nnggcctcnt 720 gaggncatat ggana 735 // ID AB155044; SV 1; linear; genomic DNA; GSS; PLN; 736 BP. XX AC AB155044; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18130T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0026. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-736 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; ccc3f3ce0d70c8e579d7e35a9c95c32d. XX FH Key Location/Qualifiers FH FT source 1..736 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0026" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18130T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 736 BP; 190 A; 146 C; 135 G; 232 T; 33 other; ggaatcaggt canttgatat gctngtttgg ctttaaaatt tntagtttat tatacaattt 60 cacttttaat tcgtcccatc ttgaatagta gtctgaaaat ccatatgccg gttcatgatn 120 tattaactaa atccattgat tctttctctt ctngctttac gtggtatttt gtcctactac 180 tgnntccttt ctgacttttt ttggctgatt aactaagatc aaatgattac nctgaagtat 240 gttatgtttg ttttgcaaca nanatacctt gtaataacaa gttcaccact tnttggaggc 300 cttgcancaa tgcgtgactc ggaagtggat tacacagttg gggctatnct ggctaaccct 360 canaatgaaa gcccctgnag atacctcaaa ggcctgtaca ngggtgaaan taacttgctg 420 atggctgatg accgcatntn tnatgttngt ctcaaggtcc tgaaacatga tccgacctgc 480 gtatttgctt tnagcttgct gctcgatctt cttcaaatng gtttacaacc ttcagatgaa 540 ctcanaggaa ctatcgaagc antaaagaac tctgatcctg aagcacatga ancagtanat 600 gctgatcttg cgactgcaat ctgctcaaat attgcanaga tgtgatcccc tgcggataaa 660 ttactggtcc tggtacagga ccactatttn ttctcaacct gaancatgcn gtggcctnca 720 tgaggcataa tggana 736 // ID AB155045; SV 1; linear; genomic DNA; GSS; PLN; 479 BP. XX AC AB155045; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18053T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0018. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-479 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 243f3ec8a6e6f9526b74ac5e49c8281f. XX FH Key Location/Qualifiers FH FT source 1..479 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0018" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18053T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 479 BP; 152 A; 65 C; 89 G; 173 T; 0 other; atttgtactg ataaattgaa acatctttta ggtagcattc gtgtatattg tagagtgaaa 60 cctttcctga aaatgcaaac tgatcaaaga tctaccgttg atcatattgg ggagaatggt 120 gagataatga ttgtgaaccc tcaaaagcaa ggaaaggaag ggcggaagat gttctcattc 180 aacaaaatat tcgggcctaa tgcttcacaa tgtacatcat cgacatttct catttttttt 240 catttctcat ttactgcaaa ttaattgcat tccatcttgt agtttctaat tgagtgatga 300 cttacaagat agttatgcat ttatcccaaa agttaaacag ttcattgaaa atatgactat 360 ttagttgagt aatgcatgat aaaaattgca tacggtttca taagaaaaga atggtgcata 420 ttttggaggg ctggctgata tttattttga gagttatagt ttgacttttt ttttttttt 479 // ID AB155046; SV 1; linear; genomic DNA; GSS; PLN; 264 BP. XX AC AB155046; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF0012_0_703_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF0012. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-264 RA Miyao A., Sawaki M., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 8e60eb4918b4e991e4b169b4a644c1da. XX FH Key Location/Qualifiers FH FT source 1..264 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0012" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF0012_0_703_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 264 BP; 64 A; 60 C; 40 G; 85 T; 15 other; ctcctttctt tgcangatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcata attacttcaa gcgtatggnc gaggataacc tcaaggtgca tgtnttttta 120 ctcgattgcc tttcaccctc antgaantgt tnctgcactg natcatcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat natgcnttnt tttttctanc annccaccta 240 tgcttttagn catcaagngt catc 264 // ID AB155047; SV 1; linear; genomic DNA; GSS; PLN; 292 BP. XX AC AB155047; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T22165T, 3' flanking sequence of DE Tos17 insertion in rice strain NF5006. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-292 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 52eedbd257187e5ac6e7e0800fa163d2. XX FH Key Location/Qualifiers FH FT source 1..292 FT /organism="Oryza sativa Japonica Group" FT /strain="NF5006" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T22165T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 292 BP; 86 A; 52 C; 62 G; 92 T; 0 other; catgcatgtt ctgtttaatt taacctctgt atgtccacct aaaggagttc atggttagta 60 ggacatagga ttgttcatgt tctccctagt aattgacaaa tgtaaatgaa ttgattcttg 120 cgaaatttaa acaggaagct tgtgaaatta gtcgaacagt ttggactaag gaagtggtct 180 cacattgctc aaattcttcc tggaagagtt ggcaaacagt gcagagaaag atggcacaac 240 catttgaggc ctaacatcaa ggtactctgt gctcctacat tttgtttgtc ca 292 // ID AB155048; SV 1; linear; genomic DNA; GSS; PLN; 688 BP. XX AC AB155048; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18013T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0014. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-688 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; da9a98b28e2ccf798d4fadbb2890f050. XX FH Key Location/Qualifiers FH FT source 1..688 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0014" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18013T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 688 BP; 197 A; 166 C; 150 G; 174 T; 1 other; cttaatacca ccataggagc taatgtagag agcctcgacg aacttaagga aattgcttct 60 ggttgtggct tccgtctgcg ggcattgtga tcatggaggc gcctgcgaca gcttcgtttt 120 ttctggtcga actcagctaa accgtgaaac ctacaaaaac agcagaagtt caaagaaaag 180 aatgaaacaa gaacaatttt actttacctt aatcaagggt gctaagatcg gattcaagat 240 aacaagcaga caacatattt agtaaccaag aagaaaatct caccgactac actgttggca 300 aaagcgtcgc tcaagacccg caacgatgac tttaagagtc ttgctgtgag gttcacagac 360 tcggtgcttt cgatggtaag gtttagcaga agagagatca acattgcagc cttcaacttg 420 acagtgtggg ttctgagtgt tctgctgagc caccttcacc ttcttggcca gaccaggaga 480 tggggtagcc acactcacac cagatggaga actcttgaca ttctgccctc cacagacatc 540 ttcaaaatag gttctcttgc caagcttcag gccaatcaag ggctctacac gattggctgc 600 taccaccggt gatcgagaag ttccggtgtc atcaacttta ctcttaccct tgtccatgtt 660 cttatcatgc tcttccgcan atgcaaaa 688 // ID AB155049; SV 1; linear; genomic DNA; GSS; PLN; 578 BP. XX AC AB155049; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18082T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0021. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-578 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 667c1c5bb89163a04a47f2ab948a06d9. XX FH Key Location/Qualifiers FH FT source 1..578 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0021" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18082T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 578 BP; 145 A; 125 C; 129 G; 179 T; 0 other; agcgcctgtc ctcaaaaatc agatcttggg taccattgat ccacagtaaa gatgccaggc 60 aaagcaagtc ttccatccaa caaaacacaa ctcctgtgga gaggattgtt gtttcagata 120 gtgaagatag tgctgatgaa tgtgaaagac cttcaagatc aaggctctca ttgatgagga 180 gacgattggc tggaaaacca agaagctaac ttgacccaaa atcttcggcg tttcataggc 240 taccgtgtaa agtcatggaa gatggcaatg cttcagtaaa ttctcttgac tgtttatgat 300 cacatatgtg atacgttctt atctttatgt tgccctatct atgatatggg tgttcggact 360 tcggaacatg ctgcgctagc atctagtaga atttttcata gaattccatg cctgcctgct 420 agcccgcttg tgttaactgt cctttctgta tcctgctgta atatctaaga ctatgcagct 480 gtcactgaca tgtgggtccc actttgcttc tgccacgcct acctgtccgt ccgtgcgtgt 540 aaactttttt tggggttgtt ttgggcggtt acttaagt 578 // ID AB155050; SV 1; linear; genomic DNA; GSS; PLN; 301 BP. XX AC AB155050; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T17043T, 3' flanking sequence of DE Tos17 insertion in rice strain NE8034. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-301 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 45acc16269200eb2e3944594724a6d5e. XX FH Key Location/Qualifiers FH FT source 1..301 FT /organism="Oryza sativa Japonica Group" FT /strain="NE8034" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T17043T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 301 BP; 96 A; 51 C; 66 G; 88 T; 0 other; caaactaagg tatcttgagc agtgcttcac acaagtttcc agtagtggtt gtgccaaatt 60 gttcgtcctt gaagttcgtg caaagattta tgagctcttt cttcaatact cctgtaatgt 120 tgattggcaa actggtgagc tacttaatca caggagtaat gatctacaga tggatagaca 180 cggtaatgat tcattacatg gaacagataa gaatgacatt gagcaaggat caaatggaga 240 attcagagaa ctaacttcgt acattgaggg ggaactttat cctcagaatg accaatttga 300 t 301 // ID AB155051; SV 1; linear; genomic DNA; GSS; PLN; 537 BP. XX AC AB155051; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18091T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0022. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-537 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; c899b2e766d6bf8932190c86c6eb5ff9. XX FH Key Location/Qualifiers FH FT source 1..537 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0022" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18091T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 537 BP; 131 A; 104 C; 105 G; 197 T; 0 other; acaggaacct attgaactat tgtttttgtt ttccatctga aaattgttca ttgactctga 60 atgtggctca aatatatttt ctgtcttcga ttccacatga cttcgctgtc ttctattccc 120 ctattttcct gaagcaaagt ggccgtttaa catgttgatt gcagtacgta atcttgtaca 180 atccagagca taataagtgt gtttgatgca gggtgagcat caagtggtcc tgagggctgc 240 agcaacaaat tcaactaggt attttgttct acacccatga tgcagactga gagttactat 300 tcatacttgc actgcttaat ctaaattcgt tactgtctca gtaagaagtt tagactttag 360 agggtgtgcg tatgtctgta tgaagctcac atagctgctc tttctctctg catttggtgg 420 tgtcacatat atgtgaaatg tgcttgatta tgtgcctctg ctactgttta tttgaatttt 480 ctgtagtgct agaaacatct gaactattgt gcacatgctc ttatcttccc tcttaag 537 // ID AB155052; SV 1; linear; genomic DNA; GSS; PLN; 328 BP. XX AC AB155052; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF0018_0_701_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF0018. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-328 RA Miyao A., Sawaki M., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 402ea68e30eb3e455276eedc2c5275da. XX FH Key Location/Qualifiers FH FT source 1..328 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0018" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF0018_0_701_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 328 BP; 84 A; 58 C; 61 G; 104 T; 21 other; gtgcncactt tntganaatg atggccatga ttgnagttac cctaattctg ctttnncaag 60 tgcacggtct gcagatcaga tancgatnta ttctaaagag agattatact ctggaattga 120 ccatcagaca aatgttaccc gagcagaacg gagaaattct gcccnaanga ctaaagctta 180 catgaactaa tgcctacaag ttatttggtg tanaaatgca gaattttgcg attttctgat 240 ggctggaagt tgctcctttc cattgcttgt aagttgnaat tacctctcaa agattttttt 300 tttcntttnn tnctnggntt ntccnngg 328 // ID AB155053; SV 1; linear; genomic DNA; GSS; PLN; 215 BP. XX AC AB155053; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18079T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0021. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-215 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 8bc55e1fbc6ba601265f3b953f37d326. XX FH Key Location/Qualifiers FH FT source 1..215 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0021" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18079T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 215 BP; 52 A; 59 C; 39 G; 65 T; 0 other; gttagacgat tacaacataa ggtttcttcc atcgattgtt gctgctgcct gcctgtttgt 60 tggcaagttc acactcaacc cgaacactcg tccttgggta agaagacatc aacttctgct 120 gaacctgcgt gacacttcat attcatctaa ctttaccgtc cattattctc cagaacctgt 180 cggttcaacg catcacaggc tacaaggtct ctgat 215 // ID AB155054; SV 1; linear; genomic DNA; GSS; PLN; 596 BP. XX AC AB155054; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18141T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0027. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-596 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 880280af61c0ca2fd69bb19d3dc23966. XX FH Key Location/Qualifiers FH FT source 1..596 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0027" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18141T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 596 BP; 182 A; 110 C; 134 G; 164 T; 6 other; cttattacta gccttctgca gagggtagtt ggttgacact ttttgcctgt gatatttggt 60 caagtagtag agatctatcg atggaaagaa caagcaggtg tggacgagaa ggatgaaggc 120 gtgatgacat gacgctattt ggacatgctg ctttttcgta cagtataaaa tatatatttt 180 ttcctcccct ggagagaatg ctaataagct gatcgcttgg aaaatcgctt ggaaattgtg 240 atgtgctcgt ctgaactaac aaacacggtt tgatatcgac tagttcagaa agataaagcc 300 aggagcctag gaggcaggaa actagactgc atccaagcaa tgcatgcgag gagattagtg 360 gtttaattag aacgtcttag tacagtgatt gcaaaggctc atgcgagaca tcatctgaac 420 aactcgtgat tgaaaccaac cctttcatca caacgcctga ttgcagaggt tcatgtcana 480 catcggtcct tttcgatctt caaattgcat ttcggaatca taactaaaac acaatngtng 540 cagtacgacc tntcatatca tnacaagcga ttaaaaaaaa aagcctnttg ttggtg 596 // ID AB155055; SV 1; linear; genomic DNA; GSS; PLN; 498 BP. XX AC AB155055; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18182T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0033. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-498 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 8acadbcd2b18d948b5da9f198e9bf35e. XX FH Key Location/Qualifiers FH FT source 1..498 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0033" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18182T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 498 BP; 155 A; 101 C; 101 G; 134 T; 7 other; ggttacacan gaaccaccac tgtcaagtaa cattgacnna atggatgtgt atgatttgaa 60 agaggaaata aagcgaatgc tcaaagttag aaaatgcttg atcgtacttg atgatgtctg 120 gnaccaagaa ncatactttc aaatacntga tgcattccac aatgaccaan gaagtcgcgt 180 aataatcaca acacggaaga atcatgtggc agctcttgct tcctcaacat gtcaccttga 240 tctccagcca ttgagtgata ttcatggctt tgatctattc tgcagaaggg cattttataa 300 cattaaggac catgagtgtc ccacggaact cgtgaaagtt gccaaatcta tagttgagcg 360 gtgtcagggc cttccactag caattgtgtc aataggctgc ctcctgtctt caagatcacg 420 gtcacattat gtttggaatc aagcatacaa tcaacttaga agtgagttgt caaagaacaa 480 tcatgtccga gcaatttt 498 // ID AB155056; SV 1; linear; genomic DNA; GSS; PLN; 373 BP. XX AC AB155056; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18685T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0615. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-373 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; d01ca622e232b4eb2ea7d18c91acda7f. XX FH Key Location/Qualifiers FH FT source 1..373 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0615" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18685T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 373 BP; 118 A; 76 C; 64 G; 115 T; 0 other; tatatgtgca acttcgcatt tggtgtaatt attcagttct cttactacag ttcaatgcag 60 cacctaccac catgtggaca agccaatcat tcgagatata ttgcgcttaa ttaccgggat 120 gaatgtgagt tcaactcggt taaatgttca gacaattaaa tgttgatggg tatgtctttt 180 ggtacacaat tcagagccat caactctact tgtccgaggt gagctataga aagatgggac 240 aaaattaatt ctaagacaac attgaataat ttatcaatac acaaaaggaa acaagattat 300 tcatctctca ccaaccgttt catcacctgc tgcttcatga tcctttagaa aaccatatgc 360 tgtcgatctc gat 373 // ID AB155057; SV 1; linear; genomic DNA; GSS; PLN; 711 BP. XX AC AB155057; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18578T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0596. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-711 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 337b6ceeb391219dc33bdd6a8b3bc629. XX FH Key Location/Qualifiers FH FT source 1..711 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0596" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18578T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 711 BP; 238 A; 142 C; 127 G; 203 T; 1 other; gaagcaggat catgcccctt gttgcatggc tgtgttgcat tcttaagctt acagtatttg 60 ctcattgcat taagtcttct agcttgagtt tgtataactg ttgcagccca ctctgcaaaa 120 cattaataac gagcttcatt aaagttgcag aagcataaga tgttgcctac agtagtactt 180 tcaaagttta ctgagcacaa ccatacagtt ataaccttat aaggaaatga aaattttcat 240 cttcgctata acaacagggc aattgaagtt ctctagaacc acaaaaagat ataacaggca 300 tacctcgggt actgcgtgaa ccatctgtct cctctgtctg aggaaaatgg cacttcatgt 360 cagttgttcc tcgagatcta cgcctaggag aaacctcagt aaccagactt tgatgatcca 420 actttgaatc gatcagattc tttagttgct cctatataat caaaggacat gcatcatgcg 480 tgcttttaac aagactaaaa caaccgagat aaaacaagaa agtgatgaac aaagattacc 540 aatcgtctga cattagtcag atgtgaagat aggaatgcga gcagaattat tgcacttttt 600 tcaacaaata atacatcatt agctaggata ttccaaccag gtaggtcctg cataatgcan 660 aaaatgtgtt agaaacaaat aactccttgc tgttcaaaca aataagttac t 711 // ID AB155058; SV 1; linear; genomic DNA; GSS; PLN; 712 BP. XX AC AB155058; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18342T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0568. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-712 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 6cdf1e6bf15bcc1685dcb0a4f8a9a4af. XX FH Key Location/Qualifiers FH FT source 1..712 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0568" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18342T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 712 BP; 229 A; 134 C; 122 G; 217 T; 10 other; gaacacactc ttaaataact tgcagaaaca cttacttgct tttcaaggaa tttcaaccaa 60 taggagtaag tgcaagctct ctggtggatt cctctggatc atcaagcatc tcaagtagag 120 aagaggacat ctgttgtaaa tnctgaaaag ggaactagtt aaaaagaata cttttttttc 180 tcaggttgct ggatctaatg cctataccct atgtatagtt agatcatttt gcanaaggct 240 ttctatctca atgcaatagt acggaagcat tttgcntatt ccctagaaaa aagacagcag 300 gactaattac aggacaatgc cacttaaagc ttcagatcga agccttatct aaccttgatt 360 gacacggaag ggccatttat ctctggaact tcttccattt gactcatttc atcctgttta 420 tcaaaaataa tatatgtgat catnctgtat aatagaaacc acaaaagaaa atagactgac 480 cgaaatggga ataatctaaa aaaaacaatg atcagacaaa acattaggcg ggtcantcaa 540 gtagttagaa acctgatgat atgtcctgga aatgcttggt ccatgatctt gacagctatt 600 caatatgaca ttcctatttc tgacagttat gtncagttca ctctcgttng attcctcaaa 660 tctnttgatg tcagtaccct tttttcttgg actntnaact gggttatctg at 712 // ID AB155059; SV 1; linear; genomic DNA; GSS; PLN; 430 BP. XX AC AB155059; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18372T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0572. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-430 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 03a2350767c03355c1842c3952ef6932. XX FH Key Location/Qualifiers FH FT source 1..430 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0572" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18372T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 430 BP; 131 A; 82 C; 77 G; 137 T; 3 other; atctgaagta acaataacat attaagatct tcctcaagtg ttctgctaat ttagaaatga 60 tcctattatg tatgataatt atggttatgg aacatagctg cagtacatag agcacctagt 120 caatcagaag ttcagaacat agtttctagc agtctgatat gaacgccttc agagctggat 180 atttttgtcc tttttaactt caagcatcat ctgtgtattt cttttatttt actttgtgca 240 atctgaagtg agccgtacag atgttaacaa aaaactttct gaaaaagcaa ccttcatatg 300 atataatttt tctcctcata aatccttata taatggaaac ttcaggaatc agatgagaac 360 tcaggatata gagctcccga ggtgaccatg tctggacagn cctgcccggg cggncgctng 420 agcccctatt 430 // ID AB155060; SV 1; linear; genomic DNA; GSS; PLN; 533 BP. XX AC AB155060; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18408T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0576. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-533 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 56cfeaf6639176c20ee5978b9157f9fa. XX FH Key Location/Qualifiers FH FT source 1..533 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0576" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18408T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 533 BP; 146 A; 134 C; 114 G; 139 T; 0 other; gataatattg aaaaggtaca aaggttcgga ccgtttaccc ccatgtaaat tttgactgcg 60 tttgtgtaac atctagtttg agttattagg gctataagtg ccaattgcct agagtttcct 120 tttgccttta gagccccaaa acactgctct agagtgtcat agtgtagaga gtggagatgg 180 gcttgtctgg taagatgctg attgctgaca cctgacaggc ttcttggcga ggccacgaca 240 agctacatgc cgagcttctc cagaaaatga actagaaccc aaaaactgaa aaacctaact 300 tctccagatt ctcggaagct ggataccaac tagcagattc tcataatctt aagctccccc 360 aaacagggcc tagatcaccg tcccaagcga tggccgtcac agcgaggcag ctagcacgac 420 cagcgaggtt ccggacctca tcggttcctc tcccaccgtt cactcatttg tgacctctca 480 gtccaaggtg accgaaattt tgacaaattt gactctttca gaaaacctat ttt 533 // ID AB155061; SV 1; linear; genomic DNA; GSS; PLN; 590 BP. XX AC AB155061; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18426T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0579. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-590 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; a577d1de929b4fc7a0b8bf1d6903e785. XX FH Key Location/Qualifiers FH FT source 1..590 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0579" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18426T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 590 BP; 165 A; 165 C; 111 G; 148 T; 1 other; gtactcacag tcctccccct ggnacctcct ggatttggag agaacatgcg gattctcatc 60 ttggatctgt tgacctaggt cctcattggc ggtccatgat cgatctgttg ccacttctcc 120 gatcacagac cactattaaa gtgggtgatg gaagacacac aaatttctgg cacgatatct 180 ggatggatga tcaaccccta gccacaagat ttcatgccct ctacacccat gctatcaagc 240 agtcttgctc tttgaatgat atttgtcaaa ggggcctatc tcactctctg gtgccacgac 300 tctcaacaga agctcagagc caattgaaca ttcttgaagc actactacag caattgccac 360 tcgccctgtc tcaggatgag atagtcagta aaatcaagtg caaaaatggc atcatttcgt 420 cctcagccct ataccaccta caaatgtcaa actttcagac ttggacacag tgggaataca 480 tttgggaaag caaagctccc cccagaatca aattctttgg ctggctccta gctttcaacc 540 gactgccctc aagagtaaat ctacacaaga agaaaatcct ccccacacca 590 // ID AB155062; SV 1; linear; genomic DNA; GSS; PLN; 218 BP. XX AC AB155062; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18334T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0567. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-218 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 8c5fcd77e83719e759481ef8593540b7. XX FH Key Location/Qualifiers FH FT source 1..218 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0567" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18334T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 218 BP; 51 A; 67 C; 48 G; 52 T; 0 other; cgtctgccat agctcccgag ctgctccaag caatggatgc tccacatgag cctcctgcca 60 atgtctcctc accagaagca gcctctccgg aggcatcatc accacggtct cttgctcttg 120 aggtcacaga gcagcttcag gacttgtctg tgcagtacca attaagtgag agccaggaag 180 agattgtcca acatgttcct gtgtccacca aatcattt 218 // ID AB155063; SV 1; linear; genomic DNA; GSS; PLN; 604 BP. XX AC AB155063; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18639T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0608. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-604 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 318267c571b5e1f054878050417a3e1e. XX FH Key Location/Qualifiers FH FT source 1..604 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0608" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18639T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 604 BP; 146 A; 136 C; 128 G; 194 T; 0 other; tttctatgtg taattttgaa tctgtatgtt acatctactc ttgtaaatat tagtgaactc 60 cgtgtatatg tacgtagcta ctcatattta caggaaagtc aatcccgatt cctggaaggc 120 gaggaaccag cagcctgaat ggtgctccag caactactga taccttctac aaaaacagcc 180 gaattccaga tgaccagttt ggtgcaggca atcgaatatg cgagcttgtg tagcgccgtg 240 ctgtcctgcg ctgtgcttga tctttggcct ttgcaaagtc ctcactttgg agctacattt 300 tgtcagataa actttcagct ctctgctcga tcttcttgga acgcgttgta tatgaaatct 360 ctgaagcgcc tggaatactg tcttgggtct actgctgaga tggatgtcga gtcgtattga 420 aaagacttgt aagcatgctc gatctttttg ccgatatcat agtcttgaag tatgtctatt 480 atcccaaaat ataatatcac gtcgcagtac tgcccggttg gctgtccaac gacatcagtg 540 tcattctttc tgattgtcag ttcagccctt gacagcatgt ttgccccaag tttaatcttc 600 gacc 604 // ID AB155064; SV 1; linear; genomic DNA; GSS; PLN; 629 BP. XX AC AB155064; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18473T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0585. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-629 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 3183fad76510e74729810ffbb10ee8ce. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0585" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18473T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 629 BP; 210 A; 111 C; 127 G; 171 T; 10 other; gttgactcta tttacattgg caaagtttgt ggtaagtacc tgtgcttcag ggctatcctg 60 tagcattgtg aacgcttgcn caacgcgtcc aggggctcca gaggaaacaa gtgaaatttc 120 atggttatcc tcatgctcag aagtttttga atgaataana ccctgagatg attccgaatg 180 aacaagaccc tgagatgttt ccgaatgaac aagatcctgg gatgctccta aatcaacaag 240 accctgtgtt tctgaatgaa caagatcctg aggtgtttct gagtgaacaa gaccctcctg 300 acccaccttt gtagggacat caaggtcacc agaggggaga ggctccaatt gagcagactt 360 agcactattt aagagaaaac aggtcatcag ttttttttgg gggtaaagaa caaggaagag 420 cagtgaagca taaaaccttt atntagaagg aaaataacaa aagcncaata gaatgatttt 480 acggtttgaa caacttcaaa ataatttgtc tacatattgt taacattttt ctcaggcata 540 cttcgcatat atatatatgg agatattcat tgtcnaaaca tactgcaaat taanaancng 600 tgatgaaaaa aaaanattna aaaactttt 629 // ID AB155065; SV 1; linear; genomic DNA; GSS; PLN; 907 BP. XX AC AB155065; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18535T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0591. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-907 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 5465c31d8b2b8dfea641b1d0bec79dbe. XX FH Key Location/Qualifiers FH FT source 1..907 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0591" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18535T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 907 BP; 284 A; 203 C; 142 G; 257 T; 21 other; acattaacca tgaaagtaat cagtacatca atgttcatat ctatgtaagc ttatgcacta 60 tctctaaata tatgtatgta tacaaaaagt tgtgcacttc ataaaacaac agatgagttg 120 ggatttgttt tttctgaaac atgaactttc atgtactgag acaaaatctt atggattttc 180 agaaaacttg cctctccatt cataagccag ctattgaaca actcctcgct gtcttctctg 240 aaaccttggg acagatttct gaaccccatc atctccatgc ttggtgccgc cgccgccact 300 cccatcgagt tctccatcat cgcctttagg aacatatctt cacttgtgtt cctgaacagc 360 tcagacagac ccctgccctc catttccatg aaccctctca actcaccttc agcccccctg 420 acaaaatact taaccagatt attgactata aagttcctaa aaactgtctt tagtacttaa 480 ctaagtaggg tcacaagagg caatcatatg atttcaagaa gatatagtga aacaaataag 540 ataatataaa gtagaatacc acctaaagca ctcactaacc taagaaatgg aactagcaga 600 agagttcaag cacacaagac atgatactaa ttgaatatta tactagttgg cttataataa 660 acagagtgga ggtatcttcc cttctgtgga ggcaagattc cacaattctg gtttgtctta 720 tgagtgnaaa atggccttga naattgaccn ctttgcattt cnctggaatg aataataaat 780 gcccaagagn cttgttncag cngntgacga tactgcntct gagtcancct cctatacggt 840 gaaatcgcct cttttnattn aatgncaatn gaaattcntn acaaactaat ncaacncggg 900 ncnncct 907 // ID AB155066; SV 1; linear; genomic DNA; GSS; PLN; 699 BP. XX AC AB155066; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18626T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0606. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-699 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 72a9b6344b57be7819e6643e52fc0f6c. XX FH Key Location/Qualifiers FH FT source 1..699 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0606" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18626T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 699 BP; 210 A; 125 C; 141 G; 216 T; 7 other; ggttccttgt tgaaccttga ctctgctctt ttgcattgga tacatcagat gttggggtat 60 ccaccatgtc caattccaga ctatcaaaag ttgttggtct cctataaagc ataattcgag 120 taaacccatt ttcttattcg acttgtcatg ttagatatta ctactttatt gtccagaagg 180 caatcttcta ggatataact gaagatatgc acacaaaatc ttacatgact gtctgatgat 240 cataagttgg atgggcactc cctgataact cactctgaag agtagtgcat attgagttcc 300 ttggctgcag agtttctaaa tttaaacaag ccagcactga tgcacgaagt tgtgtagcac 360 aatgagacat tcgagagttc atattaacac caatagttct gtttgaactg ttgatcactg 420 aaatgttaga agctgtcttg ctatgatccg catcacgagc tatatttgat ccaaaggatg 480 ctgaggagtg tacttgtgaa gctggaacac tttgggagta tttaatttcc gatgggggcc 540 tcatgataga cagtatttgg gatgctaaaa aagcatagca gtgttattaa tatgaagcac 600 atgatcaata agtaagtanc gtaagtcatt caagttagcc atgcnatccc aaaggatcac 660 taacntacnc ttgnnaaaat gaatgaattt nttgaaagt 699 // ID AB155067; SV 1; linear; genomic DNA; GSS; PLN; 558 BP. XX AC AB155067; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18718T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0619. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-558 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 8990a21301e84e7846c48c7f037bf68f. XX FH Key Location/Qualifiers FH FT source 1..558 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0619" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18718T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 558 BP; 145 A; 104 C; 112 G; 195 T; 2 other; tagaccaaag gacaagggtg gtttgggggt tataaatcta tacatccaaa atgtagcact 60 tctcccgaag catttacata agttttatac cgctgaagat cttccttggg tcagattaat 120 atggtcttct tattatggaa caaaggtccc tcatatggtt ttcaataaag gctccttttg 180 gtggagagat attattcagt tgtctgatat ttatagggct attgcttagt gctccattca 240 atctggttct tcagttctct tttgggatga tttgtggaat ggggatgtaa gaaagtagaa 300 gttccctgaa cttttctccc aaaccacggt gaggtgggaa tcagcaagct cttttgctaa 360 tttagttttg gaagattctt tcaacctccc ccttaatgcc gaatcatata ttcagttctt 420 gcaattgcaa tcanagttag actctctaac tttcgcatct cttggaaaag gtgatcactg 480 gtctttcgtt tggaactcta ncaattattc ctcgagaaag ttttacaaat ctaatttcgc 540 tgggatttct gttccaag 558 // ID AB155068; SV 1; linear; genomic DNA; GSS; PLN; 830 BP. XX AC AB155068; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18728T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0620. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-830 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 2911d8330a3592e42a6e3ceabda28d31. XX FH Key Location/Qualifiers FH FT source 1..830 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0620" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18728T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 830 BP; 233 A; 179 C; 165 G; 240 T; 13 other; gttcgttcca gacatttgtt taaaattcac ttttcttctt tcagatttgc aagatatatc 60 caagccgtga agacagctct gtccttcagc ggcaagagag gtcaagaaga acatttaaca 120 ttttgaaaga cccagctttg ccggcaagaa gaacaaactc gtccaaagag ctgttgcatc 180 atcaaaatgc aagaggcgta agtcttctac tctaaaaact ttacctacta ccagcagcaa 240 gctactaagc acgcccactt tcatctagtt gttgagaacg tgtttagtca tgcatgctta 300 gccatgagat gtgtcatgtg tgcaaatgtg aaatattggt gtcatgcatt tccccttttt 360 ccacctcgca aaagaaatac atttcctctg cgtttcactg aatttatcan atattcacaa 420 ctgttgcatg tgtctttttt tcccttgttg cgatattcca attcanacat caattgagtt 480 gccgaagcaa ggtcgtgagg aagcaaaagg aggttgtgag tcccatggtg acactggaaa 540 aatgaaacag aaccattttc agagaaggta aggatccttt gacagaatga ttagaattcc 600 ttattggttc cagctatttc gacattatag atgtctttta caggaaaaaa cgcgctttgg 660 anaacggtcc accgagtttt tctcagcctg gctcagggaa tcaagctcat aattgaacat 720 gtagttattt gcagccctgc aaaaggctnt anatttgcag gatntttcac cacaaatggg 780 cncggcccac agctnttgan gatcctgccc ggcggcgttn nnancccttt 830 // ID AB155069; SV 1; linear; genomic DNA; GSS; PLN; 746 BP. XX AC AB155069; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18726T, 3' flanking sequence of DE Tos17 insertion in rice strain NF0620. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-746 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 37541d3305b0b063202a5d9b2862ea6f. XX FH Key Location/Qualifiers FH FT source 1..746 FT /organism="Oryza sativa Japonica Group" FT /strain="NF0620" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18726T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 746 BP; 227 A; 184 C; 155 G; 175 T; 5 other; gctcgatggc agcatagacg gcctcatgtc ccttatccag caatgccaag gtcatgtagc 60 acaacacctg agccctgcat tgatccaaat caaattcaga accccgataa aaaacaacac 120 cctggctgtc cagcccatga aatggccagc aaacaaagat gctagagggc aatgttttca 180 ctctcgcggc agtgtgttat tgtagacgcg tggtgtggtt gtttttcttt cctgactata 240 gatttgtatt tttctcctgc tatatcaata tatgaaactc aaaataaaaa atcgatatcc 300 atccagaaac tcaacaaaca gtaggcagtt gaactgacca tccgatgaag gcgacccaat 360 tgtagataga gaggtagagc ctccgcacca ttgaaccatc cgctgccatt gcagagctgc 420 gagagatgga ggaggaagaa gacttcgaga tggtgcttgg cttttaacat gatggattca 480 tggctaatgg ctttgaccag gataatctca atatctcatc catccaccag tcgacgtgca 540 gtcaaatcgc actactacca caccatcagg aattcaggac atataaattt gtgcatgatc 600 tgaccaccca aaagaacaca ctgagaacga agagatcttc aactaaaatc aacgcaagaa 660 tttgtgtgca tatcacccgc atgttgcacg canattctgc aagattcgan acgcnggctt 720 acccanatcc natgggaggc ccctcg 746 // ID AB155070; SV 1; linear; genomic DNA; GSS; PLN; 346 BP. XX AC AB155070; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18757T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1004. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-346 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 628b674a83a60f45018c93d2906049d4. XX FH Key Location/Qualifiers FH FT source 1..346 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1004" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18757T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 346 BP; 125 A; 58 C; 58 G; 104 T; 1 other; gaatcaagtg caatttcagt tctcttagca gattttttta agattagact tacaaaanct 60 ggtaagctat tcaactcaaa ccaagaggga agactgatat tatttctcct tctctctgga 120 ataacgtttt ttggttccat tgaatgatat cttctaactg atccatttca aaaacaaata 180 tagcttgatt atgaggtttc ttctgtctca aaccgtgtaa agggaactca gatggaactc 240 ctttaccagc caggctaata agacaaagtc aaaattaaag tagagaaaag gaaaactggg 300 ccaaaaaaaa taataaggaa aagaaaatct gatgtgtcca tctttt 346 // ID AB155071; SV 1; linear; genomic DNA; GSS; PLN; 423 BP. XX AC AB155071; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19170T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1045. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-423 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 7a6cf0b46c7f5af87ab490916f612233. XX FH Key Location/Qualifiers FH FT source 1..423 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1045" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19170T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 423 BP; 111 A; 72 C; 87 G; 153 T; 0 other; tataggtgtg tcttacggca ggaaaaaaaa tcatacttga acaccaaaat cttctgtgta 60 taggagggtt tgttttgttc gttgttcttg ctactgtttc tgacagaatc ttaatcttga 120 gtaaagatcg cagcatccca tgggttaaaa gcttcatcat ttgtgtgtgc atcttttatg 180 gatttaataa ttttgcaaat ccttgtaagt ttttctctga agattctggt aaatgcttgc 240 cttttcttat ctaaagacta gtgattgtct ttgcctgcat tacttggtag agacaccgga 300 tgaatcggtg tgagaacatg aatacatgat gtaccttttc tgcatctcct tagtgagctg 360 atgtaccttt tggcaatgtt tggctaattg gaaatggaaa tgatttcccg ctcaccaaaa 420 gac 423 // ID AB155072; SV 1; linear; genomic DNA; GSS; PLN; 601 BP. XX AC AB155072; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18772T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1006. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-601 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; c01097d7e7b8315e2f0460bb97f9a65d. XX FH Key Location/Qualifiers FH FT source 1..601 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1006" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18772T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 601 BP; 165 A; 140 C; 104 G; 192 T; 0 other; ttcatcagca ccaaaatggc attgatgcaa agggagactt tcattcaacc tactctcccg 60 cacaaatgat ggatctgcga caagtcgcac cgctacacga atcttaaagc atcggcattg 120 ctgtccactt cccctgaatg atgtttgatg tttctgtata tcagttcctc tactctctag 180 tgcctccccc cttcccttca gagcaagtcc aatatagtgt atgtagttac ctgtatcata 240 tcatcaactg cctagctttg tcgcccaagg aacttagaac agtgctgtac atacctcaaa 300 taaaatgttt cgtcagctaa agtaaggcta ccctgaacat gtgaaaaatc tgtggtctct 360 gaacattgtc tgcacatcat cagtagtaat ggaaatcgtt cattcttttc acttgttctt 420 gtcaataatg gtttgactga ttcattattt ggcatgggca gttccatcgt attgccttta 480 actgatcatg agccttaacg catactccct ccattaaaaa aaaataatct aggaggagat 540 gtgatctctc tataacaaat attgtactag gagaggtcat atctccttct aggttttttt 600 t 601 // ID AB155073; SV 1; linear; genomic DNA; GSS; PLN; 619 BP. XX AC AB155073; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19309T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1008. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-619 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; b21fbabeea48fa40bb19bb79d32f6c54. XX FH Key Location/Qualifiers FH FT source 1..619 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1008" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19309T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 619 BP; 190 A; 116 C; 112 G; 197 T; 4 other; ccaatcaggc ttttcttttg tccttttcct ttttataatt cctgtctcgc cacctgaagt 60 gttcaagctg ccacagtcac aagtatctaa caacatagga tgatggttct tatagcattc 120 agatacatca tctgcaataa tgtttgcaaa caagatctct gcagctttat tccttacaag 180 aacaggaatt tgtccagatt ggtctcgcac atatatctgc agatgatgaa aagacgattt 240 tactaaatta tgttcaaagt aaactatgaa ggtgggtacg acttcttgaa ctctttacca 300 tgaagggttt gtatatctgc ccaataacat gaagatattt tggacttttt gggcagtcaa 360 tgggataagt attttctcca tggaggtttc tgcatagaga tttaccgtat catgagttca 420 tgacagataa ggcggagatt ttttatatat agctcatgaa ccattggcaa tacaacatgt 480 aaggtgcata ctttggatat aaaggtgaac cacataacgt gcatccagca gtaactaaat 540 ctctgaaaat atcatcatgt tcntttcagg gaaaatcttt caatgactga aacttcctat 600 tgaagngaga cncccnaaa 619 // ID AB155074; SV 1; linear; genomic DNA; GSS; PLN; 503 BP. XX AC AB155074; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19321T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1010. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-503 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; a7a86c8afda878f459538f7f3e51cee4. XX FH Key Location/Qualifiers FH FT source 1..503 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1010" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19321T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 503 BP; 129 A; 99 C; 103 G; 153 T; 19 other; atgaccatct agggattcaa gtggaccgac ccgcgagtat acttatatgt caaataagtg 60 gtaacccgcg ggtttccgta tcgtagccta gcttgccgca tctagagatg taagtggatc 120 gatccataaa cccaattata aacaaaatta atggtaaccc gcacggttac ctattaattt 180 gacctataaa tgagtccgcg ggttgcccgc ttgcatcctt gtgcatcctc tggttacgta 240 cattgtataa agaagtggtc attaattcat tatcctagtg aaaccattat gttcctctgt 300 tacataggga caaataatgt gtatatagtt tgtactccta gtttgatttg tttcttgttg 360 atacaaggtt acactctatg atgtgacttc tcatacggac caaattttct caggcgcaca 420 tctcaccgnt gggttagcac ctcattttga tgtcttaggg ggtgttnggn ananagggan 480 cntnnnnnnn tnnangangn act 503 // ID AB155075; SV 1; linear; genomic DNA; GSS; PLN; 329 BP. XX AC AB155075; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19324T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1010. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-329 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; dcb7f67ffc0349114fdb3dec97615206. XX FH Key Location/Qualifiers FH FT source 1..329 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1010" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19324T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 329 BP; 89 A; 65 C; 68 G; 107 T; 0 other; ggaacaaggt agacatatgt tcaaattagt aatcttttgt atactgtaat gtaacttgca 60 agaaactgct tctagtatgt ggtacctcgc ttgtacaagt gtctacactg gaatcctgac 120 cagcttcagg tttcgaggac aaggtggtgg ttagaggtga cctcgttctt gcatttctct 180 tttcagaggc cacacggttc gcgatatctc ttagctttga tgcttcacgt tccttgtcgt 240 ctaatgccaa tttcaattta gaaatctgat agacaattac acaccatgag ttacagaaac 300 aaagttccga tgatgatcgt gtaacattt 329 // ID AB155076; SV 1; linear; genomic DNA; GSS; PLN; 431 BP. XX AC AB155076; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19087T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1036. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-431 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; e6800f89ebc9b437ca4021a899bab835. XX FH Key Location/Qualifiers FH FT source 1..431 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1036" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19087T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 431 BP; 155 A; 87 C; 83 G; 106 T; 0 other; ggcagcacgt cgtcaaattc aggcaactca gtgcttcatc atgcagcaac agccactcat 60 ttgaaaccag acatcgagtc acttacaaca cattgtgaat ttgcaaggtc aaagttaaaa 120 gaagtgttca aaaatgccat tcatggttaa tacacatgta cactgacatg ccaaatgtca 180 gtttcaaaca tccgaattca aaaacataat gacatgtaac agttgtacta cttgacaaac 240 tagggaaaac aaatgtaaga aactgaagtt gccatggccc atggagaacc aaatccatcg 300 atgttctgca caaaactaaa cagttgaatt atattttgct ttaccactga aaattccaac 360 caggttcata cttcaatttc gtgagaacat tcgaaataat ctttcagaaa agagaggggg 420 gggggggggg t 431 // ID AB155077; SV 1; linear; genomic DNA; GSS; PLN; 690 BP. XX AC AB155077; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18838T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1012. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-690 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; eaecd85d871befb4f30e8016ef62799c. XX FH Key Location/Qualifiers FH FT source 1..690 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1012" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18838T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 690 BP; 204 A; 133 C; 161 G; 188 T; 4 other; accaccacct gcgctgcgct gcggacgcac atggagtgga gttcactggg ttgaggtttt 60 gatctgggga gatcattgtc atgtgagggg ctaatctccg cgaaatgctt gatgccaaag 120 ttaaagaatc acgaatcacg catgggacaa ttctgaggaa ctctgatcat catgaaagcg 180 agggcatttg gatggcagat ttttcttttc agaatgttca cgtgctagta ctgttttttg 240 tattgtggac taccccagct tgtagagacc ttaaatattt ccagggtgtt caacagtaaa 300 aaaaggagag gggaagaaaa tgaaacaagc atgtccagcg cagggaaaag gtaggtagat 360 gcagtacaag ggatgcactt ctgtgtgatt actcacaaac ttatgtgtga tcactgcgaa 420 cttccgtgaa aatttatgtg tctcatacag aaacgtatca cttctatgct tgtgattact 480 gcgaactcct gtgtacatgg caaatttcct cataggccaa atttgcatat aagcttgatt 540 actcacaagc ataggcaaag cacaacaggg gtgataagtg acnaactgat gaatgaccgt 600 acccttgatt tatagggata ccaacaagaa tttcacaatc gacattcntt ctgttgtgaa 660 tgataacnat tacaattcnt aacgtcccgt 690 // ID AB155078; SV 1; linear; genomic DNA; GSS; PLN; 517 BP. XX AC AB155078; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18888T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1018. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-517 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; b1a7947876dfa1f6a5fc595cbb600556. XX FH Key Location/Qualifiers FH FT source 1..517 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1018" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18888T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 517 BP; 110 A; 130 C; 83 G; 193 T; 1 other; tctcatacat atactcaaca aaacacatga tggtttctcc tgaatcatcc tctgttgtga 60 ctgtcgcacc aacagaaata ctgaggtctt gaacaataac acatttgtac agaacttctc 120 cagacactgt ttttccagct gtttgacctt cccatttgat ttccttgcga gtatctgctg 180 acgactttct agaccgtgtt gatggtggag tccttgtggc cttctcatct tgaacattta 240 cctcctcttc agcatcattg tcttcatttt cttcttgatc atcatcaatt tcctttggtt 300 cattctgatc ttcttccttt gtatccccag ggaaataagt ggcatagtat tcaccccata 360 tcttgctgat caacattgta gttgtagcac gcataagctt ctttctcant attggaccca 420 tttttgcgct tgggttcaga ttctcccctc tcatctgttg agattttttc ttgatggcca 480 actttgtgtg cctactttcc tccatctttg ctagaag 517 // ID AB155079; SV 1; linear; genomic DNA; GSS; PLN; 327 BP. XX AC AB155079; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T22027T, 3' flanking sequence of DE Tos17 insertion in rice strain NF4901. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-327 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; d91b904d31d84a3ee0efeea5ee981feb. XX FH Key Location/Qualifiers FH FT source 1..327 FT /organism="Oryza sativa Japonica Group" FT /strain="NF4901" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T22027T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 327 BP; 74 A; 90 C; 74 G; 88 T; 1 other; ctctcatgct cgcatgacac cggtttttct tgtgcaaaca attcctccaa cgagctgctc 60 ctctcatgtt caccagcaac aggtttggcc tgtggtgaag ggacacagac atacccttga 120 tggtgatcat tattttcttc ctctgctggg acaacatctg aagagttagg caccattgag 180 ccattgttcc tgaagctaat agaccctgaa accgcggcac cgtgaacatc agagcacggt 240 ttgctggact ccaccggtac caaggcacgg tntccatgat ctctgtgctc tgtgtctgtc 300 tcaacctcag aatccattgt ggtgaga 327 // ID AB155080; SV 1; linear; genomic DNA; GSS; PLN; 599 BP. XX AC AB155080; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18936T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1022. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-599 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 4a6c8ed138c4313252f88a497961c138. XX FH Key Location/Qualifiers FH FT source 1..599 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1022" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18936T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 599 BP; 157 A; 152 C; 153 G; 137 T; 0 other; gaacaatgcc ccgtttgaag cagctggcag cactaagctg cctacccttc tgtccagtgt 60 gcttgcttgc tttgtaaaga aagtgatgca ctgtgccatc acagcagcat atatcaggct 120 ggaagcccat attggaaaca acttgaccag ctctgcagct tctttaggga cgaattcact 180 gcttgaattg ctgacatccc cctcagacga tgatgacggt agcaactcat cagaactgtc 240 aggcaatctg cagcaaatgt tagttccaaa atgactcaat gggaagtttc agactttcag 300 tagtaacctt acttcgaaca ggacgatgcg atccaacgtc gaatccactc ggcgacctct 360 ccgaatgggt ttcccttact cttcggaggg tagaagcgat aactccttgt cccgatcaag 420 aagatggcaa gagaaacggc catggcgatg catgggattg cgaagccaag ctgccagctt 480 acgctttcct ggacataatt caagatggga acagtgacag tgttgccgcc gtaggaggcg 540 aagaaccacc agttgaagaa ggagctcctg gaggcgagct cgccggggtc gttctcgtc 599 // ID AB155081; SV 1; linear; genomic DNA; GSS; PLN; 546 BP. XX AC AB155081; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18733T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1001. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-546 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 8b951bc3f020c50b072584c3b616b96e. XX FH Key Location/Qualifiers FH FT source 1..546 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1001" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18733T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 546 BP; 143 A; 111 C; 112 G; 173 T; 7 other; ggtactagnt ttctctgcga aaagttttgc gaagaattcc cacctctgcc tgctagaaag 60 tggcctgcag tagccgctgt ttcaacgcct gtgactgtga gctcttcgcc tgctgaaaca 120 ggaagcaagt acgtgattct tacattgcga tctcgtgttc tttttgcatt tcatgataca 180 gncgngctgt tgcatttttt ttctaattaa attgcatcat gtcgtgaata aatctgtagg 240 ccagaagggc tctaccaact gagagatgaa gctgacttcc ctcctctcaa ggctggtgct 300 cgcaatggat ttaatcatan agttggaaga tgaaggatgc tttactagct tgcttcagga 360 gaagtctgat atcgtacaaa gcttggatgc tattccaatc gtaatancat gctttcagct 420 gtctgaaact ccaataatcc ttagtgatac aatcattagg tctttaagtg ttaactcctg 480 gtaggagcct taattgtaaa anaactagct catcttttta gctnttataa cccgaaaaaa 540 atgttt 546 // ID AB155082; SV 1; linear; genomic DNA; GSS; PLN; 765 BP. XX AC AB155082; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18915T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1020. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-765 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 02acfdb371a4474ea11912a37044e1ce. XX FH Key Location/Qualifiers FH FT source 1..765 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1020" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18915T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 765 BP; 214 A; 162 C; 150 G; 236 T; 3 other; agtctatgac agttcattgt atctatcatt atttttttcc taaaagatat ggtcacgcac 60 ttggaagaat tcttgaccat gagatggaga atctgtatgc atccatcccc atctccttca 120 tactgcgcac atcttcctgc attttttggt ggccaggccc tcaggatgag tactaaatta 180 gtccttttaa agaatcttag aattaaagtt tgaagagatc gtggcagagg cagactggca 240 aacatgttgt gtatatttga ctaaaacctt tacaaaagat caattagaaa tggccatgac 300 agcaacttga aaaatgctat gagtaattgc taataccttg tagagatggt agctgtcgca 360 agccacatcg ccattgcttc tgtcagtgat tttgtctgcc aaattggcgg attttcaatt 420 caaaataatg tctcattgcc tttcctttct tgccatttac agttaacatg cctggagact 480 gatgtgtgaa ggtgtcccag atgcttggtc ctctgccacc caacactgcg ccaccctcga 540 actgcatcat gtgtaaaaca acagtcaatt cgtcaggttt atttcagacc tgaaacagag 600 cacatcgtga tgagttgaga aggaatcacg aaacagttga attgactact gaatacgtat 660 tggatcaggg cttgaattcc tctctaccag caaatatgag cnttattctt actcttatag 720 ggcancttga gcatttttca ntgccatcat ttgctggtca ccgat 765 // ID AB155083; SV 1; linear; genomic DNA; GSS; PLN; 553 BP. XX AC AB155083; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18973T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1026. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-553 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 9731b23ea9d618e0e60acc194c7a625d. XX FH Key Location/Qualifiers FH FT source 1..553 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1026" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18973T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 553 BP; 164 A; 90 C; 115 G; 182 T; 2 other; caaggcatac gtctggccct ctaaggcctt gattaaggtt gattaggtgg gatttggaat 60 tgatttattt caatcgcttc gtcatgggat taaccgaaac aaccgatggc caattagtgc 120 cgactgttgt gacccaagtg tagtggtgct gtaatttgtc cacattgaga gctaactgtg 180 cactgcacta tcgtgtacag cgcttacact tttgtttttc aacaaaaatt cggaattttg 240 gaactttttt ggacgaaaat attcgaagtt aataaatttt gaatgatttt gaataaatat 300 cgatcaaatt cacaaaaaat tgaaaggaaa aggaactcca aaaattttgg ccgagatatg 360 cgcctgctga tggggataaa attactgaaa tttcaaaaat tttgtttcaa aattgcaatc 420 gctgatattc gtacaatgtc taccagttgc tatacatgct tgggcccatc caatgatcca 480 atgtggggct gtttgtaatt cttggtgcta anaagattag gtaagtcatt anttcttgat 540 ttattgggca ttt 553 // ID AB155084; SV 1; linear; genomic DNA; GSS; PLN; 599 BP. XX AC AB155084; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18976T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1026. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-599 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 98d9c816450997f0e4aa2b7ff61b9272. XX FH Key Location/Qualifiers FH FT source 1..599 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1026" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18976T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 599 BP; 192 A; 91 C; 96 G; 217 T; 3 other; tacttaatgt catcatatat gctaaagtat atttccttat gcagatgtct gatgagcagt 60 gctggtaatt ttatgaaaag gatgtatgtg aagaggactc ctgaacttaa caaatctata 120 cacatttact ctagtgctct taaagctaca cttacctggc agaatatgac cacacttcag 180 gtattgtcaa aaagcgccac caagtatttt tttctttaga gatctattta gttaggaatg 240 ttgatacatt cggatggaca gggattctag tagaattttc ttgcttattg tgatagagtc 300 tactccctcc gttccaaaat ataagcattt ttagaatagt gctaagtcaa actttttaaa 360 ttttgactat taatagcaaa aaattagaaa agattaatca tgtaaatttg atgttactat 420 gtttatcatt aaatgaacta tcataatatg caactctttt tatttaanat attttacttt 480 tgtanatatt gttagttaaa gtagcatctc anagaccgtg tccaggtcca aaaatgctta 540 tattttggga cggagggagt atatcttatt attccaaaca agcccttttc ttgatcgat 599 // ID AB155085; SV 1; linear; genomic DNA; GSS; PLN; 504 BP. XX AC AB155085; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18977T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1026. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-504 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 7df9284f30319cc1fde039c31c14f951. XX FH Key Location/Qualifiers FH FT source 1..504 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1026" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18977T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 504 BP; 163 A; 121 C; 91 G; 129 T; 0 other; ctcacatgcc agcctcctct tcactgccaa ggtagccttt ggactgtcaa ttgccaatcc 60 aagctgaaca tcaattgcct gacagtacac caagccgcgt gacatggaca ttttgtcagg 120 atgatgttct tcagacataa gtaaaagcca caaaactata gcatgtacgc aaagccatgg 180 catttgactt atactagtaa aattatgacg attggtctta gaaatggaca tttcaactgc 240 tatttacatg agtcatgtga tttctagcta tttgatttga aagaaagatt cacccaaaaa 300 aataaaataa aaggaagcag atggagaaac gctttacttg acccagggct tgcatgcaga 360 tagctttcag gattccttca gctaagtcca caggaagacc tttcctacac gaaatggcag 420 tcagcaacaa taactcctgt ccgacctgca ctaactacag aacgcaacat tgttcatcaa 480 acacaccacc ttttctccgg cgat 504 // ID AB155086; SV 1; linear; genomic DNA; GSS; PLN; 781 BP. XX AC AB155086; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19002T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1028. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-781 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 06195be1b2755562621e069682d93427. XX FH Key Location/Qualifiers FH FT source 1..781 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1028" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19002T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 781 BP; 215 A; 184 C; 164 G; 209 T; 9 other; gacacgacca aaaaacaagg ccttataggc agattttgag ctgtattggc ccgaactctc 60 ccatttccag atgattgaat caggagtagt aggatcaaga tccaccattt ggacaagcga 120 ccaaagcttt agatattcta gaataggttg gatcccaagt gctcctcgga tgtctttgat 180 ccattggcga cctgttagtg cctcagccac cgtccgacac cggcgcacgc gtggtggaat 240 tttatcatag atgttcggag caaaggaccg aatgcaaccc tnttgcaacc agctatcttc 300 ccagaagagg atagtttgtc cgtctnttaa ttgacagatg gtagaggctg caacgaagtt 360 cctttccttt tgcgaccccg gaatggctag cccctgccaa ggtttgcttg aggaggtccg 420 ttgcaaccat gtccacctgg aacgaagagc tatacccata agctccagat tcggtacacc 480 caaaccgccg tagttacaca tgccagcatc gatcaccttt gttggattta gagtttacac 540 ggacaaagat aagatgatnc ataaaatatg atcagttctc ctatagctta cagtttcatc 600 atcattcaaa catctatcca ttagcctgct cattgngccc aatggatctt nttggcctat 660 tcaaaatgaa agaaaggtac cgacattcac atnttaagtt ttcaagttcc accaagaaag 720 gagatagagt gcattaatca gttaaccttt nggttntaga agngtccttt ttggcacctt 780 t 781 // ID AB155087; SV 1; linear; genomic DNA; GSS; PLN; 656 BP. XX AC AB155087; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19014T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1029. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-656 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 56ce216d044ad56eb2ecd1bd538f0678. XX FH Key Location/Qualifiers FH FT source 1..656 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1029" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19014T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 656 BP; 159 A; 170 C; 122 G; 205 T; 0 other; ctcgtcactc ttcagcagct cacggccgcc atcttcctcg gcccaattgc ctacttcaaa 60 gagaggtgtt catcaatgac ttgcatctac acatcctgga cctggattat tcaacaattc 120 agtgctgtaa ctgctttatt gaattgtgct catgcaggaa gtccaggcca aagctcacac 180 tggagatctt cacttatctc ttcgtcagtg ctgcgctcgg gtaccaattc aattcatacg 240 aattttgcct ctagtttaat tttcttcttc ttttgctctt gaagaaaaaa caaattcatc 300 tcccggcgaa aaaacaaatt catggcttta ctaagttgtt cttctctctt gttcttgcag 360 ggcagctcta aggcagtaca tgatcttcgt tgctttgaga tacaccacgg cgaccttcgt 420 cactgccttc tccaatatcg ctcctgtcct cacattcttg cttgccatcc taacacggta 480 ggttcttgat tggaagaccc aataaattct gaattattgc acaccaggtg tcaacctttt 540 tctctttatc ttttgcttgc caattaattg gcctggcctt atacacgaat ggacaggtca 600 gaatcactga acctgaggag aaagacaggc attgcaaagc ttgtgggcac gctgat 656 // ID AB155088; SV 1; linear; genomic DNA; GSS; PLN; 434 BP. XX AC AB155088; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18985T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1027. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-434 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 868fb43048f9e9bf58ea57649e91acdb. XX FH Key Location/Qualifiers FH FT source 1..434 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1027" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18985T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 434 BP; 114 A; 105 C; 77 G; 134 T; 4 other; ctatcatcag gttcttcctt aatcttaagc tcactaaagg atgtaaaaat gctggttttg 60 tcactgagcc ctgaagggat tgttcttctc ataggatttg ttctagaccc cctatccttt 120 tcaggggttc tacaactgtc gtgaanactg caatcactac ggactgatgg tacaactggg 180 gtctccatga tatcaaacaa gggcctggat gctgcaaatt tcgcaagctt gganattttc 240 catctctcca gtattgcana tagatcatgc acaatgtaat tctgctccat tcctctcgcc 300 caagtgccaa agttcttagg tgaagggctc tcctccatca gttcaaaagc atcaacttct 360 tcaaaataag ccttttcttt cttcaagtca ggaggccccc caaaagttct tttctgcaat 420 anaatagcaa attt 434 // ID AB155089; SV 1; linear; genomic DNA; GSS; PLN; 610 BP. XX AC AB155089; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19003T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1028. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-610 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 56366240848efd60e9b5cac0b50f3ff3. XX FH Key Location/Qualifiers FH FT source 1..610 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1028" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19003T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 610 BP; 171 A; 134 C; 122 G; 177 T; 6 other; aatagcaggg tccagcagtg ggaccaacga tcacatcctt ccatgcctag aatctntagc 60 aataaagcgc tgtgatcgtt tggaggttct ccatcttcct ccgtccatca agaaattgga 120 aattttgaaa tgtgaaaatc ttcagtccct ttcaggaaaa ctggatgccg ttcgagcatt 180 aataatcaga tcatgcgaga gcttgaaatc actagaatct tgcttaggag agctcccgtc 240 gctggaacaa ctcgatcttt ttgattgcaa gagcctagta tccttgcccg aggggcctca 300 agcatactca tctnttanat ttcttacaat tgattcttgt tctggtatag agttgcttcc 360 actgagcctg cagcaacgtc tggattacct cgaggagaaa aaactagatg cccgctatga 420 aggtaatctc cagtttcttc gtttctttta atactataga ataaccagaa gcttaatttg 480 gngtncccta aaaggcaaat gtagtncgat tcactggtaa aaagtttacg agtgtggcaa 540 ccatatgatt atatgtacat agagtacaat gcacattgat aactcactcg tgcagctgtc 600 acctcccttt 610 // ID AB155090; SV 1; linear; genomic DNA; GSS; PLN; 479 BP. XX AC AB155090; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19010T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1028. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-479 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; d8dc7d1b8d105f33c439016905afb4f2. XX FH Key Location/Qualifiers FH FT source 1..479 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1028" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19010T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 479 BP; 115 A; 119 C; 109 G; 130 T; 6 other; tcctaaaggc ctgccctgcc tcaagaagtt aagcctaaat agcggcgaat atttgaagtc 60 tgtacaattg cattcatgtt cgggtttgga gtatttgcag atctcgcggt gtccacacct 120 tagtgtgttg gagggcctgc agcacctcag ctcccttcga agattatgca tccagatgaa 180 tcctgagctg tccgctgcat gggatcttaa actgtttcct ctgtcacttg tagaacttgg 240 ggtcagaaaa gtcgagggca gcttccattc ccgctctctg tcctgcctcc cttctatcac 300 aaagttagag atacaggata gtccagaatt ggtgtcttta cagctaggat actgcacctc 360 actggaaaag ctagagatta caaattgcaa gtcgcttgct tcgatcaagg gcatccagtc 420 cattagaaac cttaggtact tgaaagtcct gcccgggcng ncnntnnagc ccctattaa 479 // ID AB155091; SV 1; linear; genomic DNA; GSS; PLN; 489 BP. XX AC AB155091; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T39865T, 3' flanking sequence of DE Tos17 insertion in rice strain NG0345. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-489 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; ac4da0505409c047e7840970ccf71d8e. XX FH Key Location/Qualifiers FH FT source 1..489 FT /organism="Oryza sativa Japonica Group" FT /strain="NG0345" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T39865T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 489 BP; 102 A; 108 C; 104 G; 175 T; 0 other; ggttctacca tctggactat gcgtactctc tctttcctcc tgtagtatta cagatggagc 60 tttagctatt tgccttggtg ggcttacttc acttagaaat ttgttcttaa cagagattat 120 gactttaact acgcttccac cggaagaggt cttccaacat ttgggcaatc ttagatactt 180 ggtcattcgt tcctgctggt gtctcagatc attcgggggc ttgcgatctg ctacctctct 240 ttcagaaata agattatttt cctgtccttc tttacagttg gcacgtggcg cagaatttat 300 gcaaatgtcc cttgagaagc tatgtgtata caactgtgtg ctttcagctg acttcttctg 360 cggtgactgg ccacatctga ataatattgg gttatgtggg tgtagaagct ctgcgtcctt 420 gtatgttggt gatcttacct ccctcaaatc attctcacta tatcatttgc cagatttatg 480 cgtgctgga 489 // ID AB155092; SV 1; linear; genomic DNA; GSS; PLN; 528 BP. XX AC AB155092; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19015T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1029. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-528 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 9e53b9a2c74e6008a5f8344823755886. XX FH Key Location/Qualifiers FH FT source 1..528 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1029" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19015T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 528 BP; 109 A; 113 C; 154 G; 152 T; 0 other; gtcaccacca gcaagattcc taggtaggga accagggggt ggtggcggcg gtggcgggcc 60 accaggtttg ccaggaggcg gtggtggagg aggtgcacct ggcgggcgtg gcggcggtgg 120 agacaacgca cttgcagtgt tggcagtggc tgatggtgca ggaggtggcc taggaactct 180 tggagctctc ttctcaatat ttgcaagttt cagttgtgtc acaactagag ggttgttctg 240 gttatcacta ggttggtcac tggattcagc attagctgta ggagcctttt cctttatttg 300 agcaagtttt ggagggagtg cagatcttgg agatggcaca atacctgaac tgttgacacc 360 gccatatctt tgtaccctag ctttctcggc tttctctttt attaccttct cccgttctgt 420 ggcaagttta tgcctatctt tgtaagcggg atacttgtca tcagcaaaac cttgtacagt 480 ctttgacatc aaatggaatg aagatgcaac atttgcctca tccatgat 528 // ID AB155093; SV 1; linear; genomic DNA; GSS; PLN; 850 BP. XX AC AB155093; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19026T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1030. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-850 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; bf4608a64d70ab7b8a3ec4d121f24c81. XX FH Key Location/Qualifiers FH FT source 1..850 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1030" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19026T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 850 BP; 251 A; 152 C; 179 G; 245 T; 23 other; aaagaaaatc atcattgaac tggtccacac ggttcaagat tataaaaggg gttgcccggg 60 gcctgcttta cctccatcaa gattcaagat taacagtaat ccatagagat ctcaaggcaa 120 gcaacatttt gctggatgca gaaatgaacc caaagatatc agattttggc atggcaagga 180 tctttgggga caaccagcaa aatggaatta ctaggagagt cgtcggaaca tagtgagtaa 240 tgctcgaacc atcgcgaatt aacatttgtt tggaccctgt gcacggacta attttttgaa 300 gtgatatgat ccaactagtg gctacatggc tcctgaatat gctatgggag gtatcttttc 360 tatgaagtcc gatgtctata gctttggtgt gctgcttttg gagatcgtaa gcggttctag 420 gataagctct actgatttca ttgaggactt cccaaatctt tcaatatatg taagtattcc 480 attctatgaa tttgtaatca cttcatttac ttgcagaagg atttgaagag aagcaagtta 540 tacttatata attaacttat caatatgatg gattcaggcg tggaacctat ggaatgaagg 600 gaaggcaaaa aacatgattg acccatctat tgtggcaagt tgcctattan atgaggtcat 660 gctatgcatn catgttggac tcttgtgcgt tcaggaaaat ctaaatgata ggccactcat 720 gtcatctgnt atgcttattt gganaatgga gcaattcnnt tccaccccaa taaactgnta 780 cttgccaagg gntttnnaat ggaccnccan aangaccctn naactaacac nannnntttn 840 cntttggngg 850 // ID AB155094; SV 1; linear; genomic DNA; GSS; PLN; 692 BP. XX AC AB155094; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T18762T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1004. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-692 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 3c87ad4e4b26267c888d33b6d826c798. XX FH Key Location/Qualifiers FH FT source 1..692 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1004" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T18762T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 692 BP; 212 A; 161 C; 130 G; 185 T; 4 other; ccagtgactt catgttgact gctgaagaat tcctacggcc taataaaatg aagcaagatg 60 agaactctta ntgcacgtct caaacttaaa ttaccagaat cacatatcac attaattatt 120 cgtagttccc tacacatcac aaaatgatgc acggctgaaa ggaacccacg tagttttcta 180 taattcaaga gatacagtgt gcataaatac ttctcgagtc atcaactagc ggggtaaatg 240 gttggttctg acctgactca tccgtgtagt aatgagatga gacgggagag gaatgattcc 300 tcctcagcac agacaagaga atcagagctg caagaagcac agctatcacc attgctccaa 360 tggcgaaacc attgattccg ctatcatccc ttccatttga gcttcctgcc gaanactcct 420 tctccatgcc aggaggagct ggcccagatg accaagagtt cccaccagtc cttcatcatg 480 tgaccagaac tatcagattt cacaagtgca acaaaaatag gcatattgac tggatgtccc 540 acttactcta aattgtcaat gctcttcagt ttacttggga tccacccagt gaacttgttg 600 ttcttcacat tccttgggaa caaaaggagg aaaaccattc tagattagtt cctaactgat 660 gtgcttaana aaattcatac gtttganatt gt 692 // ID AB155095; SV 1; linear; genomic DNA; GSS; PLN; 673 BP. XX AC AB155095; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19063T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1034. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-673 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; f60cc24f781fd38781e20ed54e7b16c3. XX FH Key Location/Qualifiers FH FT source 1..673 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1034" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19063T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 673 BP; 196 A; 136 C; 130 G; 211 T; 0 other; ctcataacat gcagtatgtt tgacattagg acaggcagtt ttagcctagg ttgcagcatc 60 aaacctgaat ttttttagag cttcagatgc atattcaagt tgctcctttc caacagacat 120 ccaagatact tcagctgctg aatgataatt tccaatatct cttcggcttt ccttcccatt 180 aactttatat ggatcaaagt tgctggcttc agttgtcatc tcatcattgc gattcgagtc 240 aactgaagga cttcgtagca ttgagggaat gatggatgaa tctgagaagg atgccagtgt 300 agaaccagaa agacgttctg ctgaggaaga tgaacaatca gaagattcct ttggtaacat 360 cttcgaggat tcagatagac ggaggaaaat gtttctcatg caacgaacca tctcctctga 420 gagctggtta ggattgttcc aaagattccc taatttcatg ctagttatct ttagtatgga 480 ttgttcaaat gatagagtat caatcttctc atcttcttcg ccttctttat cagtagagca 540 agattcttgc atctgcagag agataaatca aaccttgcac gaatatgtct agcacaatta 600 actatcttcc aaaactatac aaataggcat gagaaggacc tcttcatccc ggtgtttttc 660 cagaagtcta ttt 673 // ID AB155096; SV 1; linear; genomic DNA; GSS; PLN; 329 BP. XX AC AB155096; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19108T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1038. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-329 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; e0ecb0e28466b82a4c276e5da190a121. XX FH Key Location/Qualifiers FH FT source 1..329 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1038" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19108T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 329 BP; 108 A; 46 C; 51 G; 124 T; 0 other; aaacattcta caggtatgat tgatccacaa agatatggtt tgggtggatt tagaggagtc 60 tgaatccatg atattgctta catatccttg ggatccataa ggattattgc tcacataagg 120 aataacatta attgtttata acttatatcc ttggggtgac ttgtaataat aatttaggaa 180 cttacgacat gccgactatt ttttagtgaa aaatatgacg ccataaattt agcttcctcc 240 ataaataaat tgtcatacta gagaaactgt catattcctt tataatgaaa atattttttt 300 agtaatgatt caaatccttt ttttttttt 329 // ID AB155097; SV 1; linear; genomic DNA; GSS; PLN; 340 BP. XX AC AB155097; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19117T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1040. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-340 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 25b1a41ed57c553e9e68eda31b87c261. XX FH Key Location/Qualifiers FH FT source 1..340 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1040" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19117T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 340 BP; 108 A; 64 C; 68 G; 100 T; 0 other; tcgtataggc tttaggatct agttcaccat cgatcccatc ttcattctga acatcgggta 60 tgcgttctgc atggataagt aacggccttt tgtactttgc caatgtaacc aggccctcct 120 acagtacaaa aacaggaata tgaactcttc agggagttga taagctgaat tatggaactc 180 ttgtggtcgc aaggtaataa ataacagaat tgtcaaagca gcgcacctca atatgagttg 240 aatttgtcat ggggaagtca tttatacctg aggggcacat aaatgactaa atcaagaaaa 300 aaaagatcaa tcagtgtatc attctatcat ttgcttattt 340 // ID AB155098; SV 1; linear; genomic DNA; GSS; PLN; 491 BP. XX AC AB155098; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T25865T, 3' flanking sequence of DE Tos17 insertion in rice strain NF9036. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-491 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 39103cbbf99eee073ec13ce3ae06f87c. XX FH Key Location/Qualifiers FH FT source 1..491 FT /organism="Oryza sativa Japonica Group" FT /strain="NF9036" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T25865T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 491 BP; 182 A; 89 C; 68 G; 152 T; 0 other; gttacaacct ccagcatatc ttgaaaaatc tttattacag catccctatc attcttatca 60 ttcttctcct gatatatata ataaacagac aatgagacaa actagaatct ggtatacaga 120 catatggaca gactccatga agtttgcatg tataacaagc attgcgaata tgagcttacc 180 aatcatcatc agtaattgct aaaaaaaggt catcagtaga cagacagtca atcatgaaaa 240 ggcaagcatg tttctttacg cgttgcattc attaagataa aatgcctagc ttctcatcaa 300 tttacgtgcc agaatgccaa ctgataatcc tttgtactaa aatactttcc ggcaatataa 360 ctatctttta gatattacaa aatatatttc gattatctaa catttgagga aataaacagt 420 acattttgca gtaatttgct gataaatgga aaataagcta catttcttta gaaagataaa 480 taagctacat g 491 // ID AB155099; SV 2; linear; genomic DNA; GSS; PLN; 270 BP. XX AC AB155099; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 3) XX DE Oryza sativa Japonica Group DNA, clone:T19179T, 3' flanking sequence of DE Tos17 insertion in rice strain NF1046. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-270 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 86a79c923e4c2c3831e09c00aa6b8766. XX FH Key Location/Qualifiers FH FT source 1..270 FT /organism="Oryza sativa Japonica Group" FT /strain="NF1046" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19179T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 270 BP; 79 A; 54 C; 63 G; 68 T; 6 other; acanttcata tatgttgaaa aggtccaatc tagtatccct gtcccagttc ttgttggggt 60 tcgacctgtt ccaggaagga acccttgcat tggaaatcca aaggatttga tgcagatgtc 120 aactcccact gggatttcag aancattggc tcatcaacgg aaggctncaa agtcagctga 180 actgtctgaa agtgaaaagg agaactctca naggaaggta gtcatcaaag agcanaaggc 240 agttgtanct tcacgttaca tgcttgggat 270 // ID AB155100; SV 1; linear; genomic DNA; GSS; PLN; 633 BP. XX AC AB155100; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20091T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2010. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-633 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 1163bd6556acc181d1d2ac7ee8916d6c. XX FH Key Location/Qualifiers FH FT source 1..633 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2010" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20091T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 633 BP; 225 A; 123 C; 133 G; 152 T; 0 other; aaagcaagct gcaaaaatca aggttcagag ttgtgattta cagaaacaat gaaggaatga 60 aaccatggaa cacatggact gaaaattcag gacaagcgaa ttacctggat tgcactgtag 120 gagaaatggc caagatcagc aaacattgct tcagatcctg caatgccaaa catttcagag 180 ttgctaactt catccaataa tccatttcct tacaatttta gaacttacaa agggaaagga 240 tgaactttat ctcagcatac gcatacttca ctttacctgt catgcagagc aaaattcccc 300 ccagggacat ccacccagac ttcttagtct tcctcaagaa tttgagcatg taatagggat 360 taagagcgcg ataaacttga gggttccagt ggatgatatt gtacaagcca agcatgctca 420 tgcaaatcaa ccaggctagg actattggtg caaagagaaa tccgacacga tgggtaccgt 480 aatgctggag tgcaaacagg aacactaata tgacacatgt tatcggaatg acggcatctg 540 cacagaaaaa cgcataaatg agcatggcaa ggaagctaaa aaatgtgaag gttacaggtg 600 atgtaaaatt aatgtattag tacttttgca ttt 633 // ID AB155101; SV 1; linear; genomic DNA; GSS; PLN; 638 BP. XX AC AB155101; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20005T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2003. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-638 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 19903f8653ee462d102cd1dd0d1fb41d. XX FH Key Location/Qualifiers FH FT source 1..638 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2003" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20005T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 638 BP; 162 A; 104 C; 142 G; 200 T; 30 other; gtagcaatgg agtgaatgaa ccaaccaatt tggtcatgaa cttccccctg tgtctaggtc 60 agtagagctt cagaatcatg tgtatgtcgc gcgtcctcgc agaaaaggaa catggcgccg 120 ctggctgtag cgatacttgt gatattgtgg ctatgcatgg agtcatggtg atggtgtatt 180 ttgggggcat ttacacgttt gttgctagag agattttgct ggcagccaat aaggaacaat 240 atgataaacc attgtggtgt taatgcttgt ttcatcgtgc ttatgtcatg ttcctagtag 300 tttatgttag taactcgaag cctggcaagt ttttatgcat atatgtccct ttgctttgct 360 gcctctgaaa gaacagaaaa aataaaagag aaagaaagag aagaggatgg gcccatcaag 420 aataattggg ccttaagtga cagcttatgt ttgagtttga gcccaccttt gctggcgtgg 480 cgaggctcca cattataaca catgtatctc tgctattata aaaactgaaa tatttttact 540 tttattttan tacgtcttca tatttgagtc ggtttttttt tngnaantnt aaanccnnnt 600 tnnannngnt ntanggnnna tnnnntttnn cnnnccng 638 // ID AB155102; SV 1; linear; genomic DNA; GSS; PLN; 829 BP. XX AC AB155102; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20762T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3033. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-829 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; c91cfe445faf479018854d5146209311. XX FH Key Location/Qualifiers FH FT source 1..829 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3033" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20762T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 829 BP; 287 A; 156 C; 171 G; 208 T; 7 other; gcacatacta gcctcatcta gtttgtaatc tagattcaaa gcttccagca tctttaataa 60 tggaggttta tggacaggtc caaattaaag taagaaaata gcatggaaca tgaagtagaa 120 gccaaaggga taaaacatca gttgtcaaca caaatcacga ggaagaagga aaaaaataag 180 gcaaggcaca cagcatacat atcctacata tttcactaca gattcacatc cctcaaaaat 240 ggaggaagag caaagaagca aatgggggaa atagaaaatg tacctcatgc ccgcagtaaa 300 cttgagttgg cttaggcagc gagcccagtg ttacacaaag ggattggtac atttgctctg 360 cagtgccctc aaaaaatctc ccacaaccag caatgaacta taccaaaaag gaaggtcgat 420 atgttaaata gaaaaggagc catcactgta agtcagatgc atatactaac caaggtgtct 480 ccagtaaaca ctgctggatc ttcctcctct ttactagtga cgtaatagct gatatgtcct 540 tttgtgtggc tgttanaaga agggaaatga aaggactatg agatttaagt aatcaacaag 600 ctgttacaga aacatataaa aggttgacta gactgtacaa ccaatgcact acagcaatat 660 tgnttaagtc tttgngctat caactatcgc ttagttgcat gcgaagtcct tgaacataat 720 gtttcataac ttctcattgg caatctgcag gatggntatt tagtgagtca gngnaacatg 780 ttggattgct ttgtatgtaa ggttactgcc gggggccctc aacctntaa 829 // ID AB155103; SV 1; linear; genomic DNA; GSS; PLN; 299 BP. XX AC AB155103; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20006T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2003. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-299 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 7066f8584c2f66eb4a02348c11c4eaaf. XX FH Key Location/Qualifiers FH FT source 1..299 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2003" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20006T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 299 BP; 118 A; 52 C; 49 G; 80 T; 0 other; ttcaccatcc gaacttgtca gattagtaga accactatca cacttctgca tgcagtcaaa 60 tcacaaaaag gtcagtaaga ggaagaatcc taacaaacaa aagcaaactc aatcattata 120 ttttggttcc ataatctaag tacaaatctg caaagaacat ttgaagaatt caacttgcat 180 aatcatttag aaacaaatga tgtcatatgg ccacggaata tgagtattac atgcaaggtt 240 acactatcat agtataggat tgtcataatg gaagttagca acattagtaa ggatgtgaa 299 // ID AB155104; SV 1; linear; genomic DNA; GSS; PLN; 386 BP. XX AC AB155104; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20181T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2018. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-386 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 2c8bff9f18a7b3e324b7bf0e913faa69. XX FH Key Location/Qualifiers FH FT source 1..386 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2018" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20181T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 386 BP; 128 A; 101 C; 68 G; 89 T; 0 other; ataatcagtt tcttctcatt gtaaggtctg agcaaagaaa acgtaggaac aacatctgta 60 tagttcatca ggcaacaaat gaaaataaaa tccattgacc gcccaagaac tcgagatcat 120 tattactttt tcgaaagatc aagaacaaga acaagaactc gagctgtcaa aacctcaaga 180 aacagagcag agaacagaac agagcaatga gaattccgat caggaagagc cgcgagaact 240 caccgagaat ctccttctcc catatgcaat ccgagctcct cctccagctt ttgtagcagc 300 acaggacagg agtggccggc tcagcacctt tcttcttctt cttcttcttc ctcaggtctc 360 tctcgccatt aatccaaacc tccaaa 386 // ID AB155105; SV 1; linear; genomic DNA; GSS; PLN; 746 BP. XX AC AB155105; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20235T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2026. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-746 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 53a36df7608f1571cfc911f93d25a1bd. XX FH Key Location/Qualifiers FH FT source 1..746 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2026" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20235T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 746 BP; 201 A; 154 C; 188 G; 194 T; 9 other; atggggatcc tcgtctggca accattggtg gagctatttt tgttttggtg gtgctgttga 60 ttgccagttt gagcatgtat attatcaaca tacgaaagaa aagagttgat catggaaata 120 cgaacaaaga gttgttatta gccaccttgc tctcaaagaa atccaacctt tgccaccaat 180 tcacgttctt gcaaatccag gaagctacca gtaactttga tgaagccttt ctccttggca 240 aaggcgggtt tgggaatgta tacaagggtg agttagatca tggaatgaag gtggcaatca 300 agcgtggaga ccctctgtcc cagcagggta tcaacgaatt tcagacagag attgagatgt 360 tgtccaagct ccgtcatcgc cacctagttt ctctgattgg ctattgcgaa gacgagaacg 420 agatgatcct tgtgtgagat tacatggaaa atggtaccct tcaagagcac ttgtatggct 480 cccaaaagcc acctcttcca tggaagcaac ggcttgagat ctgcatcggt gcagcgttgg 540 ggctgcatta cctacacact ggtgcgaagc agaccatcat ccaccgcgat gtgaagagta 600 ccaacattct gttggatggc aaatgggtgg caaaggtttc anattttggg ctgtccangn 660 tagcacanac aaggacaaac ctatgtgagc actgttgtga angcagcttt ggatactgcc 720 gggggggnnt tttnaaacct nttaaa 746 // ID AB155106; SV 1; linear; genomic DNA; GSS; PLN; 278 BP. XX AC AB155106; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20254T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2028. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-278 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; d91a8769c615873c3e609a7f37f60237. XX FH Key Location/Qualifiers FH FT source 1..278 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2028" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20254T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 278 BP; 90 A; 55 C; 47 G; 86 T; 0 other; tctgcatcca ctcacctgat ttaatttgaa gcttcaatca agcttcccgt atacatagag 60 tacattcata tgcacagaac tggattcaaa ctagtttttt ttagataatg gattcaaact 120 agtatacata gagtacatgt acatacagca taactgctgt tggtacacac aacaggagtg 180 cccgaatgga ttggctgtgc acttgtttag cagcacttct gattttcttt ttgattgcaa 240 cacttctaac aggatgacta agatcctgaa aaaaaaaa 278 // ID AB155107; SV 1; linear; genomic DNA; GSS; PLN; 711 BP. XX AC AB155107; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20261T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2029. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-711 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; e9721768677ef4f7c282769e9b7b84e9. XX FH Key Location/Qualifiers FH FT source 1..711 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2029" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20261T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 711 BP; 211 A; 146 C; 147 G; 191 T; 16 other; tttttgatgc tacatgtcca ccagagagta ctcatggtgc taacagcacc acaaaagctc 60 gatctagtcc attcaagaaa attctggatc ctatcatgaa gtccaagtct cttaggaatc 120 cgtctcttat ggaaaaggaa gatgccaaac atagtagcct gctggttgaa ggaaaaggcc 180 gtgtattgcg gaaatctttg ttgagcggta tctcaaggac tgaacaaagc ctcacaccta 240 attgccagca aagtaaggaa gctcaagttt tgacggttac ttcatcacca actcatcttc 300 atgcggttct taaactggat cccactaatg attcttttgg ttttgagttc tgtaccaagg 360 gcccagaaga atccatttat gctaacattt ggaaagccgg aaacgaattg aattggattt 420 acactttcca tagcacaggg aagcgaacaa gtactgttgg aaagacccca aaggatagac 480 ggggatgttt gcctccaatt gtaggccaaa tgcatgtgtc ttcctatttg tactctgaag 540 ttggacaaaa tggtgttctg aatactcanc catcagngag tttgtcttgt acnatattgc 600 tcatgcnana aaaattctgc tgttgaaaaa attcaatgta canattccgc aaccaaantn 660 tgcagggntg naaaaattcn atacngcccg gggggcnntc nancctatta a 711 // ID AB155108; SV 1; linear; genomic DNA; GSS; PLN; 566 BP. XX AC AB155108; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19535T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2033. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-566 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; e79ed900a37df23cb6fec10039561161. XX FH Key Location/Qualifiers FH FT source 1..566 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2033" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19535T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 566 BP; 141 A; 110 C; 136 G; 179 T; 0 other; gctaggcagg cacatggtct cctcaatgga gctatatgtg tcaccaagcc tcctcaaacc 60 atcagtagat catcttggtg gtcttggagg gtgatgagac gtatgcctct atgctgtgca 120 actcatcttc aaccttggag agaggccttg aaggcaagct aattgatctt tggtggaaag 180 ccatgtctgt tgctagaact cttaactctt tgtgttggat ccaagagatg agaaggaaag 240 ggaagttctg gtttgatgtg tctagctttg tggtgaggcc tatttattca gttggtgtgc 300 aagacacagc atcctttgta tggtagacaa acagaatcct gccagttgag ctcccagatg 360 ctgtctatca ttgtttgaga tctggcaaca acatatggaa tctttggtgt gctgttcaat 420 tgtttaatac actgccattt atcttccaaa tgagctatca cattgtgatg tccctactat 480 tagcagcaag aatcggcagg ttagctcact ctgttagtgg atcttgacat gattgcatgc 540 acaaaacgtt ttttttaatg gagttt 566 // ID AB155109; SV 1; linear; genomic DNA; GSS; PLN; 335 BP. XX AC AB155109; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19565T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2037. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-335 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; ba4a440d37f8cf234e59db963915ad37. XX FH Key Location/Qualifiers FH FT source 1..335 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2037" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19565T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 335 BP; 123 A; 60 C; 53 G; 99 T; 0 other; cacaggtccc ttgagcatct tgtcagcaat attggttaaa tcttatgatc tgaaattcaa 60 ttccctgcta agcagaatat agaaaaaact tacttcacac tggaaagaaa atgatgcaga 120 aaatatattt gcaaattcta ctatcttttt tttattttaa aaaagaaaaa catgaacaga 180 gagtctgaag ctatcagcta atccaaaatg ttgagatcgc ggcacaaaac acatctgctt 240 ttcagtgaga atattatcat gtacaacaac aaatcataaa gactattagt agatactcct 300 atagcgcatt tgcttgtgtg gcacaacgtt tgcag 335 // ID AB155110; SV 1; linear; genomic DNA; GSS; PLN; 254 BP. XX AC AB155110; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19704T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2747. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-254 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 96654739008e17b746c33dc7b0491f1c. XX FH Key Location/Qualifiers FH FT source 1..254 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2747" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19704T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 254 BP; 64 A; 62 C; 58 G; 70 T; 0 other; gaaagaaagt tacctgggaa cgagctctgt ggatatcctg ttccatctga gcaagcttca 60 gcttgctgct ttcaagctgc tggatgtaag cctgtatgat ccatacacga aactgttaga 120 acatggaaaa tttactgctg cgtgccgagt atcggtcaca acattcacct tctttcgcag 180 tcggcttttc cgtgctgctt ctcggttctg ggcgagcctt ctcatcgtct gatgacacca 240 agagaaaaaa aaac 254 // ID AB155111; SV 1; linear; genomic DNA; GSS; PLN; 705 BP. XX AC AB155111; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20343T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2764. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-705 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 1093e466569e1d82dccce10d95a802ae. XX FH Key Location/Qualifiers FH FT source 1..705 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2764" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20343T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 705 BP; 191 A; 167 C; 166 G; 169 T; 12 other; cattgatcat ttcagcacat atctaatgtt tgaagaaaca tcaacattta taaaatgtgc 60 agaaaatagc tatcagccta tcaccagcgc cagtgtccta tcctggatcc tggcaagcat 120 gtggccaaat caagaacctg agctaggatc cccacaaaat aattaataaa taaataaaag 180 aaaaaagatg agctaggaat gaagataatc gactccnaat ctttcttggg gggcgttggt 240 gattaataca agaaaccgcc acttgtatcg ccatccaaga caggctaaac ctgatgtgct 300 caatgctcag gctcanaaca actgaataag cgtgacaatc tgacaaacac ccggcgggcg 360 gcggagcatt acctttgaaa tggaaggatt agaatggatt ccggatggcg ctggtgtcag 420 cggcggcgct cgcgctcggg tgtgccggtc gaccctgctc ctgctcctgc tgtgcctgtg 480 caggagccgg ctgggaanaa ggaggtggtg cagccgacga cgccgtgaga ccgtgagaca 540 ctctcagagg attanaggac tcagtagctt gtaaagagtg tatgtactta caggatgctc 600 ctcgccaagn gcacttgatg ctaattcccc tccccttctt gatgtaattc ncttcctgnt 660 cttgatgnta attcnctttc tcttttgnga nccacgctat ctcnt 705 // ID AB155112; SV 1; linear; genomic DNA; GSS; PLN; 275 BP. XX AC AB155112; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19714T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2749. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-275 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; a660789b895126564d9edee816237448. XX FH Key Location/Qualifiers FH FT source 1..275 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2749" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19714T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 275 BP; 72 A; 63 C; 49 G; 91 T; 0 other; caagtcacgc ttgctcctca ctctttctcc tcattcgatc ttgcgcttgc ccagtccaaa 60 ctcgtggcag agatgtgaag cagcaacaca aggttagcga cagaaacaca agaaatacac 120 gagatgtgat atgcgaatac cagaatgctg tccatatatg tgcatgtatc ttgaagcact 180 actgtatagt gtaatacaca gggaatgatg aataaaattc actcctggct tacttccttc 240 ttttcgtttc ttttcttttc ttttcttttt ttttg 275 // ID AB155113; SV 1; linear; genomic DNA; GSS; PLN; 418 BP. XX AC AB155113; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19736T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2752. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-418 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; effa61ba4caec1d7216b521a1f68672a. XX FH Key Location/Qualifiers FH FT source 1..418 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2752" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19736T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 418 BP; 132 A; 110 C; 66 G; 110 T; 0 other; actatcacaa ggaagaatta gcatttagtt catcattcca acaacatttc ttctccatct 60 ggagcaaata aaagccatca ttcctgcgtc tcgcatgcta aaatcaccac aagcttactg 120 gacagtctgg gctgaatgtt gtaagaatcc atatctcaaa caggatgtca aagttgccat 180 taacctatgc ttcagttcta attcttccga agaagacgcc gttctccata ctcccaccat 240 gaattcaagc ctaatgccaa gtactagtac tgcatatgca caaaattgca gctgagctac 300 tagttaaact gtctctaaac caacaaaaaa gggcttcggg tcactcggca ttactcagtt 360 cttcaggtcc atcgcctccc tgagagcaaa tctccattag aacatccaac acaatgat 418 // ID AB155114; SV 1; linear; genomic DNA; GSS; PLN; 321 BP. XX AC AB155114; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19732T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2752. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-321 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 39a6d8a663d41c892093ba75162fb200. XX FH Key Location/Qualifiers FH FT source 1..321 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2752" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19732T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 321 BP; 83 A; 73 C; 70 G; 93 T; 2 other; caagtctcca ccaatgtttt tcaggatcca tctgtaaagg tagtataggc atgatcacaa 60 ttgcaaaggc accctgcgtt cacccagatg gcggagcang cactggaagg cgaaggagaa 120 cagggcatgc ctgcantaga cccttacatt gaaacaatgc aaaagttcat ggaaagcccc 180 cattttttta caatggcaga gcgtcttggg gatgctcttg tgaaggtacc atgtttgttt 240 cctagtttgt ccaaatatct cccgtgtgct cattttcctt gtttaatttg gctattgttg 300 tcctaaatgc tccacaattc a 321 // ID AB155115; SV 1; linear; genomic DNA; GSS; PLN; 616 BP. XX AC AB155115; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20436T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2790. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-616 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 7ad0dc9a850fb1eaf9ef208a618f8f29. XX FH Key Location/Qualifiers FH FT source 1..616 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2790" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20436T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 616 BP; 167 A; 145 C; 114 G; 190 T; 0 other; cagtttgata gtgtcgcttc ctattccacc ttctctgatt tctgacttat ctgtcaaggg 60 gatttcagtg ttcccaacaa ttaacttatc tcatggaaca ttcagtattg aatctaatga 120 gttgaatgag ttggataaca ggatcttacc gttccataat ctgaagggct tacggtcgat 180 gtacctacaa cattgtccaa acttgagcta tgtatccagt gaagttttca gccagctcgt 240 tgctttagag catttgtcta tagagcactg ccctaatttg ttccagccac actccatgtc 300 cgagcctgtt catgaaaaca gtatacttaa cacagatcac cttgtcctcc catctctcag 360 gtttctcaaa atttcctcgt gtggcatagt aggtagatgg ctaacacaaa tgcttcccca 420 tctgctgtcc cttgaatact ttttattatc ggactgtcca cagataaaat tgctgtcaat 480 caaccaacca acagaaacag aagcaaccag cagtttggct tcagtagaga cagcctcatc 540 tagggatgaa cagattctga aaattccatg caatctcctt cgttctctaa agtggttgcg 600 aatttgggaa tgtgca 616 // ID AB155116; SV 1; linear; genomic DNA; GSS; PLN; 522 BP. XX AC AB155116; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20294T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2758. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-522 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; e08b371393ded5ecea030a5654166c9d. XX FH Key Location/Qualifiers FH FT source 1..522 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2758" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20294T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 522 BP; 159 A; 96 C; 89 G; 178 T; 0 other; atcacaatgt aagtatctaa aagtattgtt cttgtcctgt tccgaaattt ataggtacaa 60 accactcatt gcatatgcac attccaaatt agctaatatt cttcatgcaa atgagctagc 120 aaagcgtttt caggtacaca tttttttggc cttttctcgt ttatcttgtt catgatgatt 180 gatgactttg atcgttgaag aaagaattag agtttctgag aatgtcgaaa aacccgacta 240 gtagtattag caacaattaa gacaaaatgt tagtgcaagc acagttgttc agtgcttgta 300 cttgtgtggt agctaaccca tttgatttac tcttcatttt ttagtgatga aataacagtg 360 tggatatatc accccttggg aaataacaat cttgattcca ttcaggaaga aggatgtaat 420 ttgactgcaa attccctgca tcctggagtg atcctcacca atatcactcg ttatgtcgtc 480 acaaacagta atgtcaacac aaacctttct tcagttatta tt 522 // ID AB155117; SV 1; linear; genomic DNA; GSS; PLN; 504 BP. XX AC AB155117; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20304T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2759. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-504 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; ff709e1918f0fbb5fa7d84df978af775. XX FH Key Location/Qualifiers FH FT source 1..504 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2759" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20304T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 504 BP; 120 A; 111 C; 136 G; 137 T; 0 other; gaagcaccct cacactgcat gggcaggccg gctcctgatt cctctcctga ccctcttctc 60 tcccagttca tctgctgcag cctcgctcct ccggtcgatt cgccgcgccg cagcgaagcc 120 gatgccgagg gccatggttc atcttcctca gatgatcaaa aaaggtaaga attgtgcagt 180 tggtgctgtt ggagcagcct gaaatttggt aacaattgtg ctgaatctga acaatgctga 240 ctgatccaaa tgcaatcttt gatgcttgca ggagagagca gggtgtgatg gatgatgcat 300 caaaggagga gcttgaggag aggttgcaga gaatcgagtt cgtgaagcag atgctgatga 360 caacaattgc ttattagaag actgtttctc tagggttcat ttcggcagtt tgggtaggct 420 tttcaggatt tgggacaagt gcagaatgat gtgccattta atttatgctg accttcggca 480 catgtatacc tacaatgttt ggat 504 // ID AB155118; SV 1; linear; genomic DNA; GSS; PLN; 501 BP. XX AC AB155118; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20434T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2790. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-501 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 102baaba9f9eacc442b97e76a03fe181. XX FH Key Location/Qualifiers FH FT source 1..501 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2790" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20434T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 501 BP; 139 A; 95 C; 83 G; 184 T; 0 other; gttgtatgcc ctctactgtc acttattgag gatcaaattg tggcattaaa cttcaagttt 60 gctataccag cagcattttt gaactctcag cagacacctt cacagtcatc tgcagtaatc 120 caagagctta ggtaaacatt tgattagatc tctagcatat ctaatagaat tttgtgttgt 180 aacttgcata atgcttctta aacatatcac attactttag cttctcatcc catattctca 240 tctcattgca gaagtggtaa accgtcattc aaactcctct acgtcactcc tgaaagaatg 300 gctggaaaca gctcatttat tgggatcctc ataggtttac accagagggt acaaatctca 360 tattacattt ttttaattgt tactttgttt ttttaattta acctttattt tatccgagga 420 agtgttgtta aactgcattt ttcaataggg tttactggcg agatttgtga ttgatgaagc 480 ccattgtgta aggtaatgtt t 501 // ID AB155119; SV 1; linear; genomic DNA; GSS; PLN; 509 BP. XX AC AB155119; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20336T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2763. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-509 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 66e6da112f4e0b4cee1cdc45e426db6f. XX FH Key Location/Qualifiers FH FT source 1..509 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2763" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20336T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 509 BP; 143 A; 93 C; 94 G; 178 T; 1 other; ctaccatgat taaccatctc ttgattacct actttacact tgagctgcat cttactggaa 60 tcatttgagt aaatgttgca ggatatatag cttcagattt ttcagttcaa gtttcaggcc 120 tgatacgatg gtttaaagaa attagtgaca gttttaagga actcaccatt tcccatattt 180 ctgtgcatac gttttctgat ccattttgtt gaggctaaaa tcccaaaaca taatttttgt 240 gccccaaagg aatgcaaaca tgttggaggt tgttctagtc tcataaaaga gctaattttc 300 agatgacaca agtctgttga gaacaggtta gagcagttgt cattcttttt cgctcaagca 360 catgatttta ttcctcctag gttcttgttt tgttcttgag aggatgtgct taaaagtcat 420 gctccattta atttgttata gtttctgcag ctttatgcat caaacgaagc aacaacgaag 480 tttcatggat cctgcaaagg agtanagtc 509 // ID AB155120; SV 1; linear; genomic DNA; GSS; PLN; 922 BP. XX AC AB155120; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20350T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2765. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-922 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 8fcb7612d76310632cd02bfe677e1c4c. XX FH Key Location/Qualifiers FH FT source 1..922 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2765" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20350T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 922 BP; 242 A; 258 C; 125 G; 268 T; 29 other; acttccactg tcaatcaatc gtactgcttt cctcccattc accttcagca aaacagaaaa 60 agtatcaggt cggtcaaaac catatacaac actctgggat atactcagca gctcttctgc 120 cttctcttcc ttcttctctt cctgttcagc ttcaatgggc tgctcctctt cttccatttc 180 ttcccccaac tcttcagtct catcacattc catcagtaag gcatgtatag cttgtttcac 240 cttacattga tgccttggaa accatggctc cttacaaaac cagcatttct tctcctcctt 300 cttgtcacca tccatccttg gtggtccttt gtttaccaca ttcttaactt gatttccccc 360 atttggaggt ctgtttctat tgaaattatt agcagccttc ctggaatttg cagccttctc 420 atatgtttta gcataccagt aagattccaa cagaccctgt ggcttctgcc cacaaacatc 480 atgcttaatt tctcctctga ggcccccaat aaagcaacta gtgaaatact gctcttgcaa 540 gtatggatgg tccctcctaa ccanatccat atagtcttca aacttatcaa tatactactc 600 tactgtcaat ccatactgct taacattctg gaataattct acagcttcat gcacatttgc 660 agtaaanaac ctggtacata anaancacac cattgnggcc aggaatcact tgccatggna 720 tcctaanccc ggaacatttg gtgncctcca taaaangaac cctgctangg tgaccatgat 780 ccctggaatc caggatncna aaattccccc tgtttancan ctaaggactt ccanaanaan 840 aattcattag acctgatann cncccnaaga tccnccnaag ggccaaaann cctngaanaa 900 anaatccgat cntgtagccc ta 922 // ID AB155121; SV 1; linear; genomic DNA; GSS; PLN; 523 BP. XX AC AB155121; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20356T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2766. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-523 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 349f9c233db101ed3afafa4d3ebd39c0. XX FH Key Location/Qualifiers FH FT source 1..523 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2766" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20356T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 523 BP; 159 A; 85 C; 101 G; 178 T; 0 other; ttcaatatct taggtgatgt ccttttgtgc ttgtacttag tacttgattt gttccgtttt 60 gaattggtgc agatacaata aacgaacgag tagtacttgt tttctaaaag acacttacaa 120 atgtcttaga gctgatgcag tggcctatgg cttagtgtaa aactgtaaat gtggactatc 180 attagcctat tcttatgcaa gggaaattat tgtttcatta aaatgagaag catctcagaa 240 tttcttttta tgctaacaaa tgctgtgtta ccagctctgc tgagagactt gatcctcggg 300 agcctagctg gaaaagactc ccaaagttga gtacaggaaa aggttgtcat acactggcag 360 tgcttgatga caagatgtaa gtttttagtt ctttctttat acttcaaaat aaccaactaa 420 aggttgcaga atgttctctt aaaaaaggtt gtctttcctt tttaagataa tggaaccatt 480 tataaaactc ctgacctcta caacaaaaga ttgtagaatg tgt 523 // ID AB155122; SV 1; linear; genomic DNA; GSS; PLN; 573 BP. XX AC AB155122; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20911T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3049. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-573 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 9fafca3ddea743b38d2398975ddb77dd. XX FH Key Location/Qualifiers FH FT source 1..573 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3049" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20911T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 573 BP; 157 A; 159 C; 114 G; 143 T; 0 other; cttgaaacgg atgacttggc gggaatcctt gtgaagccga tctgctggct cctctcttcc 60 tcactcacca acctaacact ccgaggaaac tcaggaggtg aaacgcttca caaatgaaca 120 aggaggaggc ccttcagctc ctcaccttcc ttcaagacct caaatttatt cactacgata 180 agctgcggtg ccttcctgcg ggccttcata gacttaccaa cctcaagaga ttaatgatta 240 tgaactgtcc atccatccag tcactgccca aggatggcct cccaggttca ctgaaatact 300 tcatagtccg cgacaacgag aagctcgtaa agcagtgcaa gaagctcaag aaaaccaacc 360 cagaaatcga actaattctc tagtgcacga ctaataaggt aatagatgct tctatgttcc 420 tactagttcc taaatcccac aattacacgt cctttttcct aaccccatcc atcacatcgt 480 ttgcaggggg gtgatgaact agtagtgcag tgctgggcct cgtattggag tgccctttct 540 tttagccagt cgtgtacagt acaactcggc aat 573 // ID AB155123; SV 1; linear; genomic DNA; GSS; PLN; 561 BP. XX AC AB155123; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19758T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2756. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-561 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 8060b6c1d6a897d25ff875cc68b4f63c. XX FH Key Location/Qualifiers FH FT source 1..561 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2756" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19758T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 561 BP; 136 A; 117 C; 102 G; 206 T; 0 other; ctatggagct ctttggggat tgttctctcg tattcgatga tgacaaacca acaatttcat 60 gcaacctctt tgactctatg cgtgtcgaca ttagcttgac atgttcgatt tgcttggtga 120 gtttgcactt gtcgactgca ccaagatctt aatttaccta acaaggatat cattaataca 180 ctaaattttt tatgttatga agtatgaatt cgtacttagg ttatattctc cttgttataa 240 tgtgctcaag tatcaacttt gttccttgtt actgcgaaat tcatagcact tccttattgc 300 attgtaaatt tctgaaattc acttgctttt gcaggatacc gtgtttgatc cagttgctct 360 ttcctgtggt cacatatatt gctacttgtg cagctgttct gctgcatccg ttacgatcgt 420 tgatgggctg aagtctgccg agcgcaaatc aaagtgccca ctgtgccgac aggtataaac 480 aattccttca attcgatctt tgttttagat aacattcctt caaatttgat gaccatatgc 540 ttgtgcatgt cccatcaact g 561 // ID AB155124; SV 1; linear; genomic DNA; GSS; PLN; 845 BP. XX AC AB155124; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20654T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2793. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-845 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 1fe892063cf34e57c354dda93922d450. XX FH Key Location/Qualifiers FH FT source 1..845 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2793" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20654T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 845 BP; 245 A; 167 C; 159 G; 235 T; 39 other; gaatactatg ttttgcactg gtatgaaaat gtccatgcat tattgattga ggtactgctt 60 ttgaatggca gcagcatatc caggtcactc catcgattgt atttggtcat ctcctcctcc 120 tggaccagct acaacttaac ttgatagctc aatccatatg ttccagacat acttgtggct 180 tttggtttcg tatccgacct tgatcggctt ctttttcttt ttcaacgcac aaaagtaaag 240 aaaagaaaaa aaaatttgtt tgatctgnat atcctgttgc gctgcaattt tggtccggcc 300 atanaaagaa aaggctgaaa gcgagacatg aaacacaagc acttactana gccacaagct 360 tganattggt tgtaatagtt ccctctatct aatccgtcca agcatcaaaa agggaggagc 420 tcctgctgct gcagctagct anatagcacc atcgaacagt ctgtgctcct ctctattact 480 agcaactaat tagcacacnc aattactacg caattagcag tagngctctc ttcaaatgcg 540 tttgagcttg ttcanaaagg aaaanaanat cgagngtcat taggngagca ctanctgagt 600 caggctcagg catgcaaaaa gcatttaatt ttttactagt ttagtttgct agttgagctc 660 ncatgaatta tannatcctt cttgggggcc gtacataatg gaaataataa taanacagcg 720 atgtatgctg ctatggangg aaatttgcta taaangganc ctcttatcgg gatacaaaga 780 gantnnacaa antccncngc ggngatcncc naattncnan nnccttnaat ntaatnaggg 840 gnana 845 // ID AB155125; SV 1; linear; genomic DNA; GSS; PLN; 516 BP. XX AC AB155125; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20680T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2795. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-516 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 5fd62eefb12ebaa311ac1379dc326927. XX FH Key Location/Qualifiers FH FT source 1..516 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2795" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20680T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 516 BP; 138 A; 96 C; 136 G; 145 T; 1 other; catttcacaa tgtaagtcat tctagcattt ctcacattta tattgctgtt aatgaatcta 60 gacatatata aatgtgagaa atgttagaat gacttacatt gtgaaatgga ggaagaatct 120 tgctactttg ttcgatggta aaaggtttgt aacgtgtaga cagacgatcg gtggagctcc 180 aactacgcac gattctgttt ttagccgata cggggtgttc aacccgagca agatgacatc 240 aagtgttctt gcgatganac ggacatagaa cagtggagtg gacaggccag ctcgtcgcca 300 ttttcaccga actcgtcgag gggcctatgc gcatcttcag tcttgatcag gtcgcggatg 360 gcgtggtcgg agctggaaga aggattggct gacgctgtgc tctgttcatg gacagaagga 420 gatgctttcg cggtaacagg atataattcc caagattcat tgaagctgat ggtgttgcta 480 cggttgctgt atgctactcg atagaaaaac gtcagt 516 // ID AB155126; SV 1; linear; genomic DNA; GSS; PLN; 421 BP. XX AC AB155126; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20325T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2762. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-421 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; e218b858850dbfbce0a674d9b9653af7. XX FH Key Location/Qualifiers FH FT source 1..421 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2762" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20325T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 421 BP; 116 A; 81 C; 74 G; 137 T; 13 other; cttttcactt ggctaattan ctaacttgga acnatcgata cagatccata ttccataatt 60 tcgattacaa atgcagtact cacagatttg gcttctgttt cttatcanna ttgggttgtc 120 ctcanttttg tttgccggng ctgctgtgat gggatataan atgtttggtg agtccactga 180 atctcantnc acgctgaact taccagagaa tttggtggtt tcaaaggttg ctgtctggac 240 cacggaaang ccaaaactct tncaaacatt tcctttaatt acnatgctat aaccatacaa 300 atgggtcaga aacttatgtt tgcttattac ctgggataat catgccatga ataaatgnga 360 gcacggattc tgttcctgtc tatgtaaaca atcacgatac tgtgcatata caatactata 420 t 421 // ID AB155127; SV 1; linear; genomic DNA; GSS; PLN; 214 BP. XX AC AB155127; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20375T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2779. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-214 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 3ad866ad7c74480436d647e692f35178. XX FH Key Location/Qualifiers FH FT source 1..214 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2779" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20375T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 214 BP; 61 A; 45 C; 35 G; 70 T; 3 other; ctcaccacat gtttgcaggg cctgctgatc aatgcaaata gacttgaaag aacattatat 60 tctcgtgatc ttatcaagtg aagccatatc tgatgaaagc ttgttatatt tgttgctttc 120 ttgatganat ttgttgctta tgaccacttg tgtcctctaa tcatccanag caaaaaaaat 180 cattcagccg gnctttacct ctccaggaat taac 214 // ID AB155128; SV 1; linear; genomic DNA; GSS; PLN; 832 BP. XX AC AB155128; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20394T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2781. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-832 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 36338772926b1372151d8f5d063b7dbc. XX FH Key Location/Qualifiers FH FT source 1..832 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2781" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20394T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 832 BP; 247 A; 201 C; 150 G; 221 T; 13 other; tgtagtagcc attggtgtca aacaccttag agtactcatc ccaagacacg ccgctaggct 60 tcttgtatgg atgttgtgtt tcccatcctg tcttgagaat gtgctcgcgt tcccctggag 120 acagaggaag aagcaagaaa gcataaacaa gaaaggacaa tcaacgcaaa ataaaaaggg 180 cacaacgaat gccacacgaa attattaaga aaggtgaatg gactagactg ggagatacaa 240 aagagttaag aacaagctgc tggcctaggg tagattgatt aactttggac tagaccagaa 300 actgagtttt accagggcac aggaaggctt caaatgaagg cggttcactt aactcagaat 360 aagtacttcc tgctaacgct gtatgagtct ctatttcctt gtaggttttg aggcagcctt 420 ctgcgctatt ggcggcctgt tcatgtccat tctcttccag ccgctggagc tgtttacata 480 attcatcatt ctctctcatc tgctgcacgg aaccatcatc atccatctct tcatcaggag 540 atactggtac atattcatca tcatcaccat aatcatcatc atcatccatc tcttcatctg 600 atgtanggaa tgcttccaag taaatgatgt ctgagtcagc atctcccata tcttccaatc 660 acttanatct gactcactat cttctctcat ctcatcanaa ccatanactt tctcanagtc 720 cccatttacc ctcttctcct ccaaaaanaa aaagngtttt ncctccccac atgataaaaa 780 ctttacctga ngtgggcaaa ggaaaanaca tanccctcca cnnaagggaa aa 832 // ID AB155129; SV 1; linear; genomic DNA; GSS; PLN; 684 BP. XX AC AB155129; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20402T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2781. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-684 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 4c70e83f78fadc17950374050bcc8091. XX FH Key Location/Qualifiers FH FT source 1..684 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2781" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20402T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 684 BP; 178 A; 144 C; 106 G; 236 T; 20 other; ctctactcca ccagatagga gaatccttta cacatccaaa agacatacct agccgtctgg 60 cccgtgctgt ttctgcacag gtaaagcaaa gaaaaaaaaa ggttgtactg tatctatgtt 120 ccacagcagc cattcaattt atccatttgc ttgctttgca gtcanatttc ttcatcacat 180 acattttgac cgacggcatg tcagggtttt ccttggaggt tcttcagttt ggtttgctta 240 catggcattt cttcaaggca cattcaattg gacatagnga gcanccatat ctttatggct 300 tcccttacta canagttgng cccatcgttt cccttgcagn attgattggg ttggnctatg 360 ctgttgttgc ncctcttcna cttccaattc tngttatcta ctttttgctt ggttacncag 420 ggtacatcaa ccaggnaaat ttaattcata anacttgctg cttttcatat ttgcgtttct 480 ctttancgac ttcaagttga tttaagctgg caatactttt ttcttaataa attaaaaata 540 agcttcatat taaagttatt caattttgca ttacttgcaa agcagcatta catanatttt 600 aaaaaataca naaattttct acacgtgacc tccancaaat tgcttggatg gatatggttc 660 annctancca tttttatgcc atca 684 // ID AB155130; SV 1; linear; genomic DNA; GSS; PLN; 547 BP. XX AC AB155130; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20410T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2782. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-547 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 4f88ff3da3c68e0a8da7479c29f7a141. XX FH Key Location/Qualifiers FH FT source 1..547 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2782" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20410T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 547 BP; 159 A; 105 C; 123 G; 159 T; 1 other; atatgaagca aaatcatggg tttgcattgt tacatgaacc caggaaatta acctgcatag 60 ggattcagac aattggatat aactggggcc taaagaacaa aaagttaatg agacaaaacc 120 tactcgtaat aagcatgaag tgcttttgca tttgtttcgg ccccactcca agaagttgtg 180 agggtgcggc agacaacacc agttctggta taagagattc agatttgtta cagcaatagc 240 ttgacagtgg ccttccttag ccgaagaagt catggggtat ctgcagattc agctttgtta 300 aaaagttgca tcactatggc ctttcctaca tgaagaagtt gagctttgct actgcagtag 360 attcactaca gcattcttta tccaaagaag ttgtggaggg taaggcgtat cancaacttc 420 atctttgaca ggaccttcat cagacgtgtt aaaatcatcg gaaagtggtg gtggataatc 480 tcgtcgacct cttcagcttt gtacttggat ttccatgatg ttttgtgact tgccacattc 540 cgatgat 547 // ID AB155131; SV 1; linear; genomic DNA; GSS; PLN; 210 BP. XX AC AB155131; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19955T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2783. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-210 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 996cca6530e9cf55ae3b4a94fce13190. XX FH Key Location/Qualifiers FH FT source 1..210 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2783" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19955T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 210 BP; 48 A; 53 C; 38 G; 71 T; 0 other; gcttcaacac cgaatggttt tcatttgtct cagcatcgat atactctcga cttactatct 60 cgctctggtc taagtgatga taaaactgct gccactccta tggagcttca tctcaagatt 120 cgtcctactg atgggaatcc actttcagat ccttctcgat accgacatat tgttggaagt 180 cttgtatatc ttgctgttac tcgaccggat 210 // ID AB155132; SV 1; linear; genomic DNA; GSS; PLN; 410 BP. XX AC AB155132; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20457T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2792. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-410 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 0788d7100cbab8b8c5ae083b4f0540a5. XX FH Key Location/Qualifiers FH FT source 1..410 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2792" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20457T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 410 BP; 113 A; 69 C; 61 G; 163 T; 4 other; gaacaaacct cgagccttca aatttcaagt aaagttgtgt gataatcctt gattgaccct 60 ttgtgtgctg tacagccatg ttgttatcta caagtactgg tatcttgttt ttatttcctt 120 tttctgttca tatcttctcg ttgttctctg tgaaatttct ttgttacatt ccgttcttgc 180 attcgcatat tctagatttt actctcttgg cttggtttaa gatggctgaa tttattggat 240 aatctgattt ttatgatagc tatttgaggg tataaaagaa taaattaact acntaaaaaa 300 tactccaatt ttttttcctt ttggcacnaa acacactttt gaagtagctc ggaaaacgng 360 caaacaatga tctagaatcc taaatcacat aanaacatat tttgtatttt 410 // ID AB155133; SV 1; linear; genomic DNA; GSS; PLN; 584 BP. XX AC AB155133; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T19953T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2783. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-584 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 7397c31ec4841f286512fb5d08a904fe. XX FH Key Location/Qualifiers FH FT source 1..584 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2783" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T19953T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 584 BP; 142 A; 131 C; 133 G; 172 T; 6 other; ataagatcct ctgcagcctt tttcagtgcc tctatttgta gtaaccaaag acttgattgg 60 attatgtgtg tatggtcttc tgggagtgag acaaccttgg cttcttcaga ctatctgcct 120 ctccaatgac tagctgctgc tgcctctgct catgtcaagg tctcaagcag agagtcttga 180 gtctttataa ggcagggaag agaatgtgga atcactggga caacacacac actcaagcct 240 gcctgaccca atctttgcag caactgaaaa gagatattat ccttattctc tcagggtgcc 300 cgtggaccct aacctctgcc gatcttttcc attgtaaatt ccaaaaacgc tctcccattc 360 tgattataca cttgtaccaa ctttggttga aattacatgg cacatgagaa gggcgaaagg 420 cgaagaacaa tcttttattt ttcttccttt tcttttcttt tgagaaacta gggggaggga 480 ggggcggggg gagcacctta ttctcatgac aactttgggg ctgnggtgct gcaaacctat 540 ggngtnanaa cttgccggcc tnttnggctg gattcctgaa tgat 584 // ID AB155134; SV 1; linear; genomic DNA; GSS; PLN; 484 BP. XX AC AB155134; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20430T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2789. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-484 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 4d01b8775cf6a2b229762e609dfacd99. XX FH Key Location/Qualifiers FH FT source 1..484 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2789" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20430T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 484 BP; 107 A; 101 C; 107 G; 168 T; 1 other; tgaagaaccc ttgactttcc atccaacgat gattccttaa ttgagtttgc tttcctccat 60 ttcttgccag gcagtggtct tttggtctta tttcttggtc tcttcttttc atgctcatca 120 gaactgggag agacaggatg ttttaggggt tttccaagtc tctgaaatgg agcagcaggt 180 gcatctagct taggtaaaga ctctgaatca agcaatttga ttgctgggcg gttctgtgca 240 atctgcttta gtgactgagc aactctagca atgctggaag cttccatggc tttttcagtt 300 tatcccgcag aatcatcttg tctatgagaa ggttcaggtg cttccacacg tttcatacat 360 ggtgtgctat ttttttgttg gttatatcgc tttttagtac ccaggctatg aaacaaggcc 420 agctgttgtt atctattgaa gcacaccctt gtgcaaattc tgtccatgat ccgggtcaaa 480 nagt 484 // ID AB155135; SV 1; linear; genomic DNA; GSS; PLN; 413 BP. XX AC AB155135; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20450T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2791. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-413 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; b7e172c63f9670e40ea7f4e0cf3d067f. XX FH Key Location/Qualifiers FH FT source 1..413 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2791" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20450T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 413 BP; 100 A; 108 C; 126 G; 79 T; 0 other; gcaacaacaa cacataagct caccaagaat cttctgcaga ctgcagagag gcagagttca 60 gaatcttgca ggcagaaaca aaacagcagc agcttgagag aggttacctt cgccgttgtc 120 gtcggcgcgg aggacgatgg agacgtactt gatgaggggg atgagggtga gggtccagaa 180 gacgaaggag aggacgccga agatctcctc gttggactcc gagtgggtga tgtcctccgc 240 gaaggtgctc ttgtacacgt acaggggcga gatgctcagg tcgccgtaca ccaccccgag 300 gctctggtac gccagcagca gcgtcgtccg ccatggctct ctctgcagca acagcaaagg 360 tcactctgcc tcagtcactt ctgcattggt tcgagcttag ctgccggatt gat 413 // ID AB155136; SV 1; linear; genomic DNA; GSS; PLN; 430 BP. XX AC AB155136; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20465T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2792. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-430 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 1943258d611aac5cf687b4b37f5d381f. XX FH Key Location/Qualifiers FH FT source 1..430 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2792" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20465T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 430 BP; 127 A; 88 C; 75 G; 140 T; 0 other; atagacagat gaacgagaat tacaccttat tttattggca tgtaaaagac aacgatgcac 60 tctgtgtgta ctgtcatttt gcgcaaatcc atatgctgaa catcgtttga caatccaaga 120 tgggtatgtt ttgtcacctt ttttgctatg atagtttccc ttgatcctac catgcccaga 180 cttgtcattt tcatcatcag attgtgaatc aatttgagca tcaaagctca agggaagaaa 240 tttatcatcg aatggtgaat ggtcatggac ttcaccatac aggattctta ttatatcaca 300 tgctttggaa acacatttgg gagttgtgta agcaataggc acataatctc ttctttcatc 360 aatagagcta acagtttcac atgaaactct tttccacctt tgcagcatta cacggcaatc 420 atctccaagt 430 // ID AB155137; SV 1; linear; genomic DNA; GSS; PLN; 567 BP. XX AC AB155137; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20655T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2793. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-567 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; e32e092abfe71d5923f825f625f1f142. XX FH Key Location/Qualifiers FH FT source 1..567 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2793" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20655T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 567 BP; 173 A; 124 C; 121 G; 145 T; 4 other; gaaattatac ccacccagac ttaacccctg aggctggcct gaagaaggca gactgcaaaa 60 agcaacatat gcaagtgttt gtgaatgtca caagagggta aagaaaagca aaggcagaac 120 aatggagcat cactaagatt tgattttttt ttcttcaaaa gcaagattac tctcaagata 180 gtagcataat tgtactgtac catctcttca tctcaanata nagcttggca atagttgatg 240 cttgggggtg gctttgctgt ctcacgtgac gcttggatcg gaaactaaaa aaggaattaa 300 aatcagtcan aagtgaataa ttaattttgg tgagnggagt aatcagtagt acatacccga 360 agccaatggg aagcacgtta tgcggcttca ccatgcctcc cggcaagtcc acaaatccga 420 cgagctctgg agtactatga agcaagcttc ggacgatctg cgctacttgc tctctaacgc 480 gcccccagtc caaggactcc ctggacatat gcggaacaaa ttaattactc cctccgtttc 540 taaatatttg acgccgttga ctttttt 567 // ID AB155138; SV 1; linear; genomic DNA; GSS; PLN; 740 BP. XX AC AB155138; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20693T, 3' flanking sequence of DE Tos17 insertion in rice strain NF2796. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-740 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; d6a82469a0e71048a43fbc052bc226dc. XX FH Key Location/Qualifiers FH FT source 1..740 FT /organism="Oryza sativa Japonica Group" FT /strain="NF2796" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20693T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 740 BP; 229 A; 126 C; 118 G; 244 T; 23 other; gtgagaactg aagtattgaa gctttctgaa atcaaagccc cacaaggtag tgattatata 60 tatactgtaa attttgagca tttacataag attggattta ggattctaac agcttgtctc 120 acttgaatta tagattctaa ttgtgataac tcaaataatt tacttcaata aaggacttgt 180 aaagagggtc gccttgctgt tacaatattt gtggataatg tatacatgca cttttataga 240 aagaaaacta atgtcacagt atcttatatt gaaattgggt ccatatgtct ggagaaaaca 300 tttagccatg ttatatgacc acatttcacg gtttaagaat ttcacagacg aaggtccaat 360 tcgtgtgcaa taattaggga aaaatcgctt gttttttttt gacaattcct aatatcactt 420 ttgctttcat ttgaanggnc tcaccaaaac tcctgcaagc tgaaatatan acaataaata 480 tggttgcaaa tggttccttc catgctaaca tctccattct tgaaagctan aattttctca 540 aataaatttt ctcaattttt ttctcaagct agtttagttt cttgaagctg aagctcaatt 600 ttgatactgc aatataaagc gngcgggatg atgtcnagca ccccaacgtt tacctggggn 660 cgttcatttc tttnaaaann cccccttctc ntnntctttt ngcggtntgc cnnaanancc 720 tancaaaaaa atnnnggaaa 740 // ID AB155139; SV 1; linear; genomic DNA; GSS; PLN; 804 BP. XX AC AB155139; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20701T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3001. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-804 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; f28ff2a66bd4bc46701c0f73cb76d226. XX FH Key Location/Qualifiers FH FT source 1..804 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3001" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20701T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 804 BP; 243 A; 174 C; 128 G; 248 T; 11 other; tgttaatggt gttcagcgtg tccttgttgt tcataacatt cctgtccata ttcttgggca 60 acttcttctt caacttgcta cacaccttgg cgattctctt gtactcttcc agcatgtcgg 120 tcacatcttt catggtcctg ccagatcctc gagcgacccg tttaattcgt gattcactca 180 tcagctttgg gtttgtgcta tcaagctctg aaaattaagg agctaaataa gtttcaagaa 240 agcaatctcc attcaaagaa gaacaaaaat gcctataata gctcacctgc atttgtcata 300 naatccataa tagtcatgta ccgcttaatc tttgcttggc tttccttgtc atgtcctttt 360 ggcatcagtt cagacctaaa tccaggtatc atagataaaa cctgcaagaa agaattacac 420 aatgcatgat taaattcgta aaaaaagatt tccttatgtt gcattggctt tcagtgttga 480 tatctcgatg aaatactcca ataaaaacaa gattaaatac tgaaaataaa tctaacctgt 540 ccaataggac ccatgttaag aanattctgg aacagctcgt anaatactct ganagtaaag 600 gttccttcta tcagtctctg cataagctca ggttgttgat cagcaggcat agcatctttg 660 atcttgttca ctaagccana caagtctccc attcctgaca gttaaanaag ttatgtaagc 720 tcgatanaat agcaaanggt acagattata cccatatgtt ttactaccta canacgacta 780 caatggnttc catcgaaacc cnaa 804 // ID AB155140; SV 1; linear; genomic DNA; GSS; PLN; 352 BP. XX AC AB155140; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20944T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3712. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-352 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; c1b09c70392b84d5cb80f18e5b38994c. XX FH Key Location/Qualifiers FH FT source 1..352 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3712" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20944T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 352 BP; 79 A; 72 C; 77 G; 122 T; 2 other; caggcatccc tgtaaaactc ctcttttatc taatgaatta ggacatcctg aagctaggtc 60 attgattcag caacaatgac tcgttagttg catacatata tcgtgctcct tttgttattt 120 ngtcttggta gtagtgttaa ggggtttaag gcccagcacc atctcagtca gctcttttca 180 gtactacgaa taatggtttt tgatttaaga caaccttagc atgcattgtg tgtactgctt 240 ttttgttttt gctgggccgg cggaagagaa gtcgtntgat tttttgttaa aggatgaccc 300 cagatgtttt tagatgatcc ggcccccggg cggccgctag cccctttttt aa 352 // ID AB155141; SV 1; linear; genomic DNA; GSS; PLN; 434 BP. XX AC AB155141; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20845T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3044. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-434 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 4f1ae5b7f502084b7749f0a4fff159b9. XX FH Key Location/Qualifiers FH FT source 1..434 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3044" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20845T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 434 BP; 112 A; 121 C; 98 G; 103 T; 0 other; tggtgatcat cctcctcagg cgaatcagca gcgacgaggc ggtagcaata caccatttta 60 gactgtcctg gcctataggc acggccaatc gcctggcgca tcactgaagg gttctcatgg 120 acatccaaga tcactatacg agacgcgcca acgagggaga tgccctcgcc acatgccttg 180 atggagccaa agaagactct agcatctggt gagttgttga atctatggac tgcttgctca 240 cgctgatcct gagttgagcc accagtaacc ctgaaaatat gtacctctga tttccatcct 300 ttcattctac tgaccagctt ttccaagaaa atcaaagagc gcacatactg gctgaacacg 360 agtaccttcc ctcccgtggc ttctgaaaga gacaacagat tgtgtacaaa cttggccttc 420 accccgtcgt tgat 434 // ID AB155142; SV 1; linear; genomic DNA; GSS; PLN; 555 BP. XX AC AB155142; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20915T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3050. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-555 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 9e000740c5a652e5b8e66904d09736c6. XX FH Key Location/Qualifiers FH FT source 1..555 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3050" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20915T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 555 BP; 158 A; 118 C; 151 G; 126 T; 2 other; caaacatagg tgaagccttg gacaagtttg ctatacctac gtaactactc ctactggcta 60 ttattactac acacatcggc atcaattctg aaaatcactt cgataagaaa aaaaaattgc 120 attcaagaaa gcaatcagcc gtgatggtaa cagcccaagg ccgcagctag cagcaaagct 180 acgatgcgat ctccgatggt acaggagagt tcttgaacga acagtacgtg gctntacggc 240 tagtcacgcg ttgggatcga tccggcgatg agatccgtgt gggggcgatc gatgcgagca 300 atttgatccg attgatcgcg ctagctttgg tatggagtat ggacacaata aaggcgggaa 360 ggttgagctt gaattggacg tgcaagcgtg tgagttacta caacttacta cgtactggag 420 tactcctaca acattgggtg gtacgtggct ntagcaaccg gagctagccg gggtaggcgc 480 ctacggttag gtcgaggcgt gttgcacggt cgcaatctac gtgacgacac gcagcagtag 540 aaaaaaaaaa tttgt 555 // ID AB155143; SV 1; linear; genomic DNA; GSS; PLN; 817 BP. XX AC AB155143; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20772T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3034. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-817 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; d2d5b9c3a7fedec53e95735011811dd9. XX FH Key Location/Qualifiers FH FT source 1..817 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3034" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20772T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 817 BP; 229 A; 159 C; 188 G; 232 T; 9 other; gaggcaaagg cagcaatgct cgctttcggg agaaagcatc ggaggtgttg tgaaatgtga 60 aagttctaag cctcacattg ataatggttt aatcaaacct aagcaatagg aaagaacata 120 agattagaaa gtctaattat ttgcaatttt agcaccaacc acgcagcagg cgcagaagat 180 tgcttattaa tttttctttt tttacattat gatcgcttat taattatgag gtgatattgt 240 caggcctcct cgagaactaa aaacagccat gttaataggc taatagccac cataaagctc 300 actctgtgac tatgtggcct ctctgtttcg cctatatgaa gtctagatga ttacagtaca 360 tatatgctag tctgctcgca atgctcacat tcgtctcctt agccttgctc ggtctgcctc 420 tagatcaaac ttttgccgtt tcttttactt gcatatgttt tgcatcacca tacaagatat 480 gttttatgtg catatcatag tgggcttggg aggggtcgag aatgaattca gacagtggag 540 gcggttcagc atcaaattat tatgcacatg tgcacaaaac atatgcctag gtttcagaaa 600 taaacaagga attggtaaga acaatatgaa ccttgcagca attgagggtt ctggtgaacc 660 gatgganacn acaaggctgg agngcttgat ccatcnctgc tggaggtatg ggagtttcnc 720 ccccagtagg cgttggctga tgtgacaatt gggactgagg aactgacgaa ggtgctctcn 780 tcgngttgtt caacgcgggg ggnccccnaa ccttaaa 817 // ID AB155144; SV 1; linear; genomic DNA; GSS; PLN; 823 BP. XX AC AB155144; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20550T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3016. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-823 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 80354bc07530dcb5e80e376d59ca8f0b. XX FH Key Location/Qualifiers FH FT source 1..823 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3016" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20550T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 823 BP; 213 A; 283 C; 110 G; 204 T; 13 other; cctaccagtc taccacactc accaacatct ccaatataca gcgctacatc tcctatctac 60 agcccttcat ctcctatcta cagccctaca tcactaagtt acagtcccac atcaccagtt 120 tatagtccga cttctcctgt atataaccca acttcttctg catacagccc cacatcacca 180 tcttataacc ctacatcgcc gtcttacagt tacagcccca catcaccatc ttatagcccc 240 acatcgccgt cttacagtta cagccccaca tcaccatctt atagccccac atcgccgtct 300 tacaattaca gccccacatc accgtcatat agcccaacat cgccgtctta cagccccaca 360 tcaccatcat acagcccaac atcgccgtct tacagtccga cgtcaccctc atatagtccg 420 acatcgtctg catacagccc tacttcgcct gcatacagcc caacatctcc tggctacagc 480 ccaacatctc caagctacag cccatcttcg ccaagctaca atccttcttc ggtcaagtac 540 acgccttcac atgcatactc tccaagcagc ccaaattact acaggtactg aattgttgtc 600 atatggacta nagaggcttt ggcagactgc tcagttgttg ngtcttcgta tacgcaccct 660 tgcttatttg gcttatgttt ttgttcctca gctcanatcg ccganatact cactactcac 720 atcatactgc aacnagcccg tataagncca nanggcanat tcanatagnt tgctcccgga 780 tatnaaaagg ttattagact gcgggggggg gcncaaccat aaa 823 // ID AB155145; SV 1; linear; genomic DNA; GSS; PLN; 856 BP. XX AC AB155145; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20548T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3016. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-856 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 09b0b117b342795dc24fcabc1068147f. XX FH Key Location/Qualifiers FH FT source 1..856 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3016" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20548T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 856 BP; 236 A; 158 C; 155 G; 293 T; 14 other; gttttcacat tctgctattt ctttgttctg ttgctcaatt gagttttcag gttctgttag 60 taattcattc atgcaccttt ctcttcaatt atgcagtgtc tcttctctcg catggtttat 120 gtccaatcag gagcatagtt ttgtgactat tgggcaacgg ctgcttgcaa accctctgaa 180 gtgagatctt ctcctatctg attatttcct cctcacatgt gtgttactat acatttgaat 240 ggatacataa tacattattt tcatcaatca caagaaaaag gctaagtgat catatattat 300 attctctaaa tctgaaattg catgtgatga actaagccat gtcatttgct agcttataaa 360 catattgagc aagccatttt atagtgcact ttccgataac tagttctaca taagaatttt 420 ataataaaac gtacagaatt tccctttttg gattgcatct aaagctatta ctttctttat 480 tctagggttc gattccacta tggccatcct gacgtatttg ataggatttt tcatctaaca 540 agaggtggtg tcagtaaggc atcaaggagt atcaacttga gcgaagatat ttttgcaggt 600 ttgtttcctg aaagtttcaa tttgctgatt aatgaagngg ctaanatcaa ttatcatggt 660 ctttggcagn aatatatatc tccattgctt caaacnaang cctgtaggta attctttccn 720 atgaactgga atcaggactg ggtaagcncc ctgtctttag taagctnatc accncgggga 780 aatacctcag aaggcagtgt aagaaagagg tacnatntat tggtaggcag agnaaacacg 840 acccngggcc tacnta 856 // ID AB155146; SV 1; linear; genomic DNA; GSS; PLN; 576 BP. XX AC AB155146; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20491T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3005. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-576 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; ed0688bcb2ecf245074406dea310effa. XX FH Key Location/Qualifiers FH FT source 1..576 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3005" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20491T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 576 BP; 166 A; 119 C; 138 G; 153 T; 0 other; gcatctacat aaaaaatatg caacaatgcc ctacaattta cctgaatcag tctctgttca 60 tcaaagcagc ggtgatgctg acggcagggt cccggttatc agttctcggt actgcgtgga 120 agcactcggc ctaccgatca agaccgattg gcaatcttgg taccttgaca agcaggtctg 180 caaaccagaa gctgaactga acatcaatac atcatgtgat ttgacttgta tacatgctga 240 aacatggagc aaaatatttc aatttgcagg ttgctgggag gtttgtggag taccatggaa 300 tgacaatggt gactgtcaga ggggcaggtc acctggttcc cctcaacaaa cctgctgaag 360 ggcttatgct gataaatgca ttccttcatg gtgagaagct tccgacaagc agatgatatg 420 cgctgctgat gaagctttgg aggtacaaga tggcatgaga tacaggcatg gacatcaatt 480 ttcattgaaa ggcgccaatc ggatagattt gatatggtag tatccaaatc aatttcaagt 540 gcgccgtaaa ttcagtactc tgttgaacat tctttt 576 // ID AB155147; SV 1; linear; genomic DNA; GSS; PLN; 599 BP. XX AC AB155147; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20734T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3026. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-599 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 1b7b8779589dae8dbb18995ff41ce98d. XX FH Key Location/Qualifiers FH FT source 1..599 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3026" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20734T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 599 BP; 171 A; 105 C; 144 G; 179 T; 0 other; tgagtgactg gcgaagtaaa tattgcactt ccttggttac agaatgtttg cttgtgtaga 60 tgatgacttg ctggcgaatg tgccaaaaat aagtcggcaa gagcttgcag aagcctgtga 120 agacttcagc aatatcattg gatctactca tgacacggtg gtgtacaaag gaactatgaa 180 ggatggcagt gaaattgctg ttgtgtcact atcagcttca gtacattact ggacgagtta 240 cgttgagctg tacttccaga aggaggcaag aagaactctg catcttgtga ctcgaaattt 300 caaaaggtgc agctatttgc ttatatctca tggtactttt gaattcttca ggtggtagaa 360 atggccagat tgagtcatga aaatgttgcg aagatggtgg gatacagcaa ggagtccgat 420 ccattttcga gaatgctagt ctttcagtac ccaccaaatg ggacactcta tgagcatctt 480 catggtaacc caatgatctc tcatcttgtt gcctttctgt tcaaaaggtt gataccacat 540 gacatggtga taataactta aattttgatg tatgctattt cttgcagatg gagaaggat 599 // ID AB155148; SV 1; linear; genomic DNA; GSS; PLN; 651 BP. XX AC AB155148; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20748T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3029. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-651 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 81ae79b9696a0962b716c9773a37a4e9. XX FH Key Location/Qualifiers FH FT source 1..651 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3029" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20748T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 651 BP; 168 A; 143 C; 106 G; 234 T; 0 other; ctatcatctc ctgaagttga ttaagtttgg agtccttttc tagaatttcc ctcgacaatt 60 catcggactc cttttgaacc tctagaagtc tcttttctag atcttcagcc tttgttctaa 120 atgtaacaag ttcatcctgg atgcaaacat gaatatggta attagttaat tagtctaagc 180 aaaagggctg aatcattttt ttagtaaaat taaagcttat cgagtattat acctcaagtt 240 ccttattttg tctagtcagc agctcaactt ttgcattgtc caccaccggc acctctacta 300 tctttggtgg tgcctgttca attgctagtt ttgcatcttc tttctccttt tctattgctg 360 catgtgcttc cgaaagcttt tcttgcattt cttgcaacac agatttcaag tttgaaatct 420 cttgcccctt ggcttcttca aggtcaatct gtcagcatga caatatttag caaactcatt 480 ctttttagaa aatggattaa atcggcctct acatccagaa gggatgtaca cagccaattt 540 agcaaattca tttgggtcca aggacagata aaactctaca ggggaattac cctcaagtgt 600 ttctcaacat ctaatcgcca tgtgagttcc tcaactcttt tttcaggttg g 651 // ID AB155149; SV 1; linear; genomic DNA; GSS; PLN; 767 BP. XX AC AB155149; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20764T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3033. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-767 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 5dd62ce61c8898b26daa82f8149d00c2. XX FH Key Location/Qualifiers FH FT source 1..767 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3033" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20764T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 767 BP; 230 A; 160 C; 145 G; 221 T; 11 other; catctttcca tcactatcaa tgtatgtcaa tgcagttctc ttgtcagtcg gattgaatgg 60 caggaagtga acctcttgaa taccagcacg tgcctgcagg aaatatttcc tggtgtttaa 120 ttcctcaaat aaacaagata gtcgttcctc ccctatctga caaatcgatg tacctctttt 180 ggatcagcga gcatcccgac tattgcagta tcaatagcat cttgattttc tgttcgggat 240 gctctagcag ccatcagaat tacttggtcc tgagtgactc ctctttcaaa aatctggata 300 aaaagatgta aataagtgct ttaattaaat ttaaattaag ggaaaaaata attgagttta 360 cctcaatgag attcttgtcc actgtgagct tatttaaagt cagagttcct gttttatcac 420 tgcaaagaac atccatgcca gccatctctt caattgcagt cattctcttt gttatagctc 480 cctgcagaaa taaaattcan aatcaagtat tatagtacag aagttctggt atggctacac 540 tatgtttaac agtgtgccta aaaagataca aacctgctga gacaagcgat ganaccctat 600 tgccatggtt acagataana ctgngggcat tgctatagga atgcctccaa tgaaaagcac 660 cataggttgn catcccaggg cggntggcct gggctggata gggacatgan atgatctcac 720 aaacatnccc cnagcaattg agcaatgcaa aattccgana gctgtna 767 // ID AB155150; SV 1; linear; genomic DNA; GSS; PLN; 593 BP. XX AC AB155150; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20808T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3039. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-593 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 23b91e5d35c32960b70249c2f8b850bb. XX FH Key Location/Qualifiers FH FT source 1..593 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3039" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20808T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 593 BP; 151 A; 120 C; 133 G; 189 T; 0 other; gttggatcag cccaaattca ggtcttctca ctgtaccagt tcagtccaag ctgccatctt 60 cttaacactt caagaagaac caaccaaaac ccacctcgct aacgccactt aaatctcctg 120 tgatcttgtc catcagattg tctaatgcgt ggtgagatct tcactgcaac atttggaatg 180 aaaatgacga tgctgtagcc gtgttcatta tttcacattc tgttccgggc gacagatttt 240 agctgaaggc atggatgaac caggtgaacc tttgcttggg ctagagaatt tcttcgacga 300 agatgttgat ttggtaagta catttgttag gatgtcgtgg atttgaagca ttctttgaaa 360 aatgccgtga ttcttgtgga tatgtgacag gagaatctgc ccctggaaga cgtttttgag 420 cagctgaata cgtctcagag tgggctctca tcagcagatg ctgcagaacg cttgaagttg 480 tttggtgcaa acagattgga ggagaagcgt gtaagttgac tgttttcttt ctgatcatcg 540 tttacctgaa actgaaacat attccttttc tgaactcctg aatttttttt ttt 593 // ID AB155151; SV 1; linear; genomic DNA; GSS; PLN; 946 BP. XX AC AB155151; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20811T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3039. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-946 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 6dde12f48f4f6719f63e1823eefdfdb7. XX FH Key Location/Qualifiers FH FT source 1..946 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3039" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20811T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 946 BP; 234 A; 189 C; 176 G; 319 T; 28 other; ctccaaaggt taggtcaatt tctcatccgt tttttactct gtggtgaaaa aaaatgcatt 60 tcttgattgt ttcatgattt tgaggacata ttcagcctta tggctaagct tgagaaggcg 120 gatcaggcat tctgcttcac cagtgggatg gcagcactag ctgcagtaac acacctcctt 180 aagtctggta ttgttatgtt ttttgctgtt ccatatttct catgttcttg ccatggaatc 240 ctgtatgcat ttgtgaatat aattatttgt caaacctatg attctcagga caagaaatag 300 ttgctggaga ggacatatat ggtggctcan accgtctgct ctcacaagtt gccccgagac 360 atgggattgt agtaaagtta gtgttatctc catattttta gtaagattat attttgttgt 420 tgcctcttta ttctcactta caagcgttat atgatttttt ttcttgtgac agacgaattg 480 atacaaccaa aattagtgag gtaacttctg caattgggcc cttgactaaa ctagtatggc 540 ttgaaagtcc caccaatccc cgtctacaaa ttactgatat aaaggtaana tttggtcgat 600 gtatgtggng gtcatgaagc gtatatctan atttttattt catccanatg tttttcncct 660 tggntttaan ggagtattct tattcctccc ctgnttttgt gctcccanaa atagcaaaat 720 actcattnca ngggctctgt ttannaanac agcatcagtc tctggcttcc gnctcaaact 780 ggacaggatt attgtattta ctttctaana cggtccttca gctcctgctc caagaannat 840 tcttnattct gtcctgcaat gttccccaca ttacgatcan tngtgattgg gaggaggcaa 900 nctaaatgct natctctctg nagatggggn nncccccccc cctaaa 946 // ID AB155152; SV 1; linear; genomic DNA; GSS; PLN; 657 BP. XX AC AB155152; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20702T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3001. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-657 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; f8b27fb06061ad5dc29a77fc12584ee6. XX FH Key Location/Qualifiers FH FT source 1..657 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3001" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20702T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 657 BP; 205 A; 134 C; 121 G; 196 T; 1 other; atctgaaggt taaataacaa taagcgatct catctaaagg agtagtaacc agattggcag 60 cactctgaaa aaccatgcat gtctcaaaag aacaaatata tcctccatca tcaattctca 120 tgattgtctt tgtgatcagt ctattgtaat tattgattca atacctaagc ctttacatgt 180 tttggtacaa taaactgaaa ctagttcaaa tcacacattt gttttttggg ttcatcacaa 240 aaataatctt ccatctactt gatgcttgag tgagtttggt gtcactttgt ggtggctgga 300 acatgattga gttgcctgag ccagggagaa atttagggtg gcaatcaaac aacccacacg 360 catacctctc cggntttgct ccaggcagaa tgatcccagc aagagcagca accagaagag 420 ctctaaatca ttcagtaact tgctcttcct caagtagtac tattaacttc aaattcgcga 480 tgcctcccaa gcctattgta ttctttttca tccaagagga aaatccggaa gactgatatg 540 ggatccatat caattcatag tcataggctt atggatccat atcaattcat atactggtgt 600 acatctcttc atgagaatgt aatggatcag gaaattaact gatcttaggg cagggca 657 // ID AB155153; SV 1; linear; genomic DNA; GSS; PLN; 264 BP. XX AC AB155153; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF3040_0_403_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF3040. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-264 RA Miyao A., Sawaki M., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 164e58f1fc337e491315b8a4691c1dca. XX FH Key Location/Qualifiers FH FT source 1..264 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3040" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF3040_0_403_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 264 BP; 66 A; 58 C; 42 G; 93 T; 5 other; ctcntttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcantt tntcatcatg taaataaact 180 nntgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 tgcttttagt catcaagtgt catc 264 // ID AB155154; SV 1; linear; genomic DNA; GSS; PLN; 356 BP. XX AC AB155154; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20839T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3043. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-356 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 88ca31086fb7080e290fada99d1d7ca0. XX FH Key Location/Qualifiers FH FT source 1..356 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3043" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20839T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 356 BP; 90 A; 76 C; 85 G; 94 T; 11 other; ancctttggc tgaaaaggtg tcaggatctg ccaccactct tgcatgggtg atcttaccaa 60 atggaaggaa aagctcaacc aacttcttgg tgtcaattga cgatggcatg ttacagacat 120 acagattana catgtcaatt tccttgacgg ttctggtggt gctgggtgat tcaacagctg 180 aatttctggt ggtgctgggt gattcaacag ctgaatttgg cagtgttgaa ggtatgccan 240 atactcgaac ctctatcttt cttccatcga caagacgtcc attcaaatgg atgacagcct 300 cagctgcatg gtgaggacta nagnacntgc ccgggngcgt cnnaaaaccc tnntaa 356 // ID AB155155; SV 1; linear; genomic DNA; GSS; PLN; 224 BP. XX AC AB155155; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF3050_0_403_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF3050. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-224 RA Miyao A., Sawaki M., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 2f87c43e95805d76f78c74a56b0f9e0a. XX FH Key Location/Qualifiers FH FT source 1..224 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3050" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF3050_0_403_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 224 BP; 55 A; 50 C; 39 G; 80 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcatcatg taaatattct 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttt 224 // ID AB155156; SV 1; linear; genomic DNA; GSS; PLN; 599 BP. XX AC AB155156; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20920T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3704. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-599 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 8bf45fd23d6b177b2ff55bbb0e6f7006. XX FH Key Location/Qualifiers FH FT source 1..599 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3704" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20920T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 599 BP; 161 A; 104 C; 134 G; 200 T; 0 other; aaatcatcat cgaaatggta atatcttcct cctgcttgtt tcgttttctg accgattgtc 60 caagatgcat aataaggatg ttacaatggt gctggtgcat tgctttacca gattgaggag 120 gacagggcag ggcaaggtta tggattgcaa tttgatcaag atgactctca gtgtctaagc 180 tgaacttggt agaggtggta atggaatgga tgtttatgaa ggtttcgaag aagtgttcct 240 caaaaacaca gcagaacatt actgaagaaa ggcccaagct tgggtgtccc gtggttcttg 300 ttctaaatat ttggtcaagg tatctacgtt aagtccttgc aatattctct gtaatctagc 360 ataccactta ttctttgtca tgagttttat gttctgcagg tgataaaatc tatacaagag 420 gaagaggaaa ggatccagaa ttatttgaag ccatggactg aggcaagact gtcaaaggtt 480 tgtgataggt ttatttattt tcccatttct tctgtgcatt tgttagctcg ttttcttcac 540 aagcctgttt tatcatgtac gcattcattg cctgctcagt tggaatttaa cttccaacc 599 // ID AB155157; SV 1; linear; genomic DNA; GSS; PLN; 730 BP. XX AC AB155157; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20863T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3705. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-730 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 3fd10bdf2eeb409a71c8d413ff6b4797. XX FH Key Location/Qualifiers FH FT source 1..730 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3705" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20863T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 730 BP; 201 A; 151 C; 129 G; 248 T; 1 other; cccccaaccg gtaaaggctc cctgtatata aggccgctgc ttatgggaag tggagctgtc 60 cttggtcttg cacctgctcc tgagtatacc tttatgattt ttgtctcccc tgttgggaac 120 tatttcaagg tttgtgttaa gtttttaact taacttccac cagatactcg agcaactcat 180 ccaatatgta aagaaccatg tatcctaggg aaataatatt ccttttgcag tgattatagg 240 atagtggaat tggaattaca ccacaagcag atttgctatc acgattcctg attccaccaa 300 gaatagaaat tcatcccctg ttatctttgt aaactaccat acatgctgat taaatttgtt 360 atctttgatt tacaggaagg tttagcccct attaacttga ttatagaaga aaactttcac 420 cgtgctgccc ctggtggaac tggcggagtg aaaaccattg gaaactatgc ctcggtaact 480 tctggcactg catctatgaa agctacaact atttaattta cagcttctgt ggccatcatc 540 tagttagtta tatttgcaac tatgtactta cctattggct attgcttatt ctgctatatg 600 tacagcatgt aactatgtac cctctaaatt ctattgctta cncagttagg cttctctatg 660 gttcaagagt aattgaattc caacttaaaa tgaaacattt tttgtcccta tgaaagctat 720 tatgttggat 730 // ID AB155158; SV 1; linear; genomic DNA; GSS; PLN; 240 BP. XX AC AB155158; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF5011_0_401_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF5011. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-240 RA Miyao A., Sawaki M., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 71b8b294ea1c12372a01b40eb4ad3c73. XX FH Key Location/Qualifiers FH FT source 1..240 FT /organism="Oryza sativa Japonica Group" FT /strain="NF5011" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF5011_0_401_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 240 BP; 61 A; 56 C; 41 G; 82 T; 0 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgcactg tatcgtcatg taaataaact 180 gctgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccta 240 // ID AB155159; SV 1; linear; genomic DNA; GSS; PLN; 755 BP. XX AC AB155159; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20876T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3708. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-755 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 3da1068b9ad597b78a0353546ae826d1. XX FH Key Location/Qualifiers FH FT source 1..755 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3708" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20876T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 755 BP; 198 A; 171 C; 111 G; 265 T; 10 other; acttgctcat ggtgctgcat taatgttgat cctgcaattg ctacaagttg attgttttca 60 tactttagct tctgtctgtc ttcatacata atactcaact gctcttcttt ttctataagc 120 aactctctga ggaaggtctc ctcctgatta gcatcatcaa tatgattctc ataattatca 180 aaaacttctc ttaatgtcga cagctccaat aaatctttaa tgtggctctc aatctttaaa 240 tcttcaagtt catggctaag cttctcaact tgtttcacaa gttttaactc ggacaacgag 300 tgctgtgcca ttttcctctc tgcatctaat acttgtaaag acagatgttt agccaccatt 360 tttttgtcag ctagcaaacc ttgaagttgt tcattttcat gaagtaaana gccgattctg 420 tcctcaaatc cgcaaacctc ggcatcatca taattatcac aataagggtt atcttctctc 480 aaggngattt catccaattt tgaaatgctt tgaagcaact ttgatttgat gatttcaagt 540 tctctctctt tcctanaagg caacaaagct atatctttcg caaattccct ttttagccta 600 aacaactctt ctgttttctc atgcaattca nactcgngct gtcttcgcaa cttcagccat 660 tctgatttta aaaaatttgn gacttcttca cttggcatgg gctttaaaag tgaaantccg 720 ggataccggc cgggggccnn ttcgaaccct antaa 755 // ID AB155160; SV 1; linear; genomic DNA; GSS; PLN; 602 BP. XX AC AB155160; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20938T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3711. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-602 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 17be2c6312f1d3143901b44983436b03. XX FH Key Location/Qualifiers FH FT source 1..602 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3711" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20938T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 602 BP; 150 A; 150 C; 116 G; 185 T; 1 other; agcaaatcgt cttgcactga gtactaaacg agcatgatct ctcaaaatca aaatgctttt 60 gtgcgaaaaa gagcaattca tgataatttc atttttgttc aaaacttggt tcagcgctta 120 cacaggtaca agaaaacaga gtttgttcat taaagttgat attgccaaag ctttcgatat 180 ggtgtgctgg ccttacctcc ttgatgttct tcgacagttc ggctttggca accgttggct 240 caattggatc tgcaaccttt ttgccacctc ttcgtcccag gtccttctca atggtgcacc 300 gggacaacca attcctcatg cgaggggtct tcgtcagggc gatcctctgt caccaatgct 360 ctttattctc gccatggaac ccttccactg gattcttaaa gcggccgaag gtgcttccat 420 cctttctccg ttagagagta accgcaacag gttccgttgc tctttatatg ctgatgatgt 480 agctgttttc acaagaccag atgcgacaga gctcaccacc ctttcaaagc ttctaaattt 540 cttcgcgcaa gttttangcc tccacacaaa tgttgccaaa actgaaattt ttcctattag 600 at 602 // ID AB155161; SV 1; linear; genomic DNA; GSS; PLN; 810 BP. XX AC AB155161; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF3713_0_404_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF3713. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-810 RA Miyao A., Sawaki M., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 74eb9b532a44760c896a4c0e8d397d88. XX FH Key Location/Qualifiers FH FT source 1..810 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3713" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF3713_0_404_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 810 BP; 207 A; 169 C; 168 G; 224 T; 42 other; cttctttctt tgcaggaatc cacctntatt ggcatgaaat ccttgcgtac ttccatgggt 60 ctgaacttca gaattacttc aagcgtatgg tcgaggataa cnttnaggtg catgtttttt 120 tactcgattg cctttcaccc tcaatgaagt gtttctgcac tntttnatca tgtaaataan 180 ttgntgcaat acatgcaaat catcgatgaa atcatgcatt tttttttcta gcaatccacc 240 tatgctttta gtcatcaagn gtcatcaagn gtagngcttt tctcaccttt ngtactcccc 300 tctgtacagc ctatcatgaa gcctcaggtt gagatcatgc acaaaaaccg gaattctttt 360 caagtaagng taggccaact acttgaccgg aaagatgana ggggtatgaa agatcagctg 420 ngcaacggcc tccaattgaa cgaagttatt gaccgaaaag tggcaaaact ttctggtggn 480 gagctccaaa gagttggant agcagcagct gccctgcaaa gcgcggatgt ttacatgttt 540 gatgagccat caagttatct tggatgttaa gcagaggctt aatgctgcnc gagtcataaa 600 gtcccctgct tagaacaaac aggtaattgg nnacctnctt tnangataan cctaactact 660 tttngacnga tagcttcaaa aaattaccat cattggcctc ccaaattngg ttncagctat 720 gtntccgggg gggacangac ctggggggcn taaataactt nncccactnn ttggcggcct 780 anttggggga accngggctn nnnncgganc 810 // ID AB155162; SV 1; linear; genomic DNA; GSS; PLN; 588 BP. XX AC AB155162; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20948T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3713. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-588 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; cfc3881f2ff9e5eccedfc2d7c3260d0f. XX FH Key Location/Qualifiers FH FT source 1..588 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3713" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20948T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 588 BP; 139 A; 131 C; 135 G; 183 T; 0 other; aatttaccta agtatttatc aagttatgtg ctatctagac tcactcaagt gtttctaatt 60 gcccctttct agaaattttg tcattcttag ctgtcatctc aggaaactga cgtggcgaca 120 agtgagaaac gaccttgcta tcccttgtct ctcctctccg gtttaccttt ttctatgtgg 180 caccctaaag ctccttaaat gtgtgggacg cactgtgaat gctcttacta ctcttcaccg 240 accctagtag gtcaccacca tggacatgtt gcctgacgct tgttgtcact tgtagagcgg 300 tagaggtaga gagatcaaag cggcacattg tagatctaga gagtctcccc accacttgcg 360 ctgatgtagt tctttccgcc gcctccttgg atcctgtcgt tgccgttgca ggaggcaggg 420 aggaagagag ttcgttgaaa aactttgctt gcatgggcca ctattgccag cgtgactttc 480 tagactttac tggatatgga taagttagag aaagaagata agggcaagag agttatctaa 540 taatctaaag ctggctcttt tgttagcttt ttgattggtc catgtggc 588 // ID AB155163; SV 1; linear; genomic DNA; GSS; PLN; 264 BP. XX AC AB155163; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:NF3715_0_102_1A, 3' flanking DE sequence of Tos17 insertion in rice strain NF3715. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-264 RA Miyao A., Sawaki M., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; cb538f671ac6b7402ea5dd6803a0b9d0. XX FH Key Location/Qualifiers FH FT source 1..264 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3715" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="NF3715_0_102_1A" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 264 BP; 65 A; 58 C; 40 G; 96 T; 5 other; ctcctttctt tgcaggatcc acctgattgg catgaaatcc ttgcgtactt ccatgggtct 60 gaacttcaga attacttcaa gcgtatggtc gaggataacc tcaaggtgca tgttttttta 120 ctcgattgcc tttcaccctc aatgaagtgt ttctgctttt tttcatcatg taaataaant 180 tttgcaatac atgcaaatca tcgatgaaat catgcatttt tttttctagc aatccaccna 240 tncttttant catcaagtgt canc 264 // ID AB155164; SV 1; linear; genomic DNA; GSS; PLN; 461 BP. XX AC AB155164; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20964T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3715. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-461 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 013b1b75d97ba2935eea91847e8a523b. XX FH Key Location/Qualifiers FH FT source 1..461 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3715" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20964T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 461 BP; 162 A; 92 C; 93 G; 114 T; 0 other; gaatccaggt ctctctgcgg gtatggcaaa atttgttcaa ctaacctgca atgtgcagac 60 agaatctgtc gcagaaaaga tggctccaat tgctgcacat tgaacataac agtcaacagg 120 aggaaatgat gctcacatgg tgtcaatatt agtgccagca tgatcatgca gaaagatagc 180 catggcttac caagaaaatc tcctacatcc agcgttccaa tgttcattct gctgaatatt 240 gcaatggcag ctgaaattaa gaaattgatc agagtcagaa tctcagaagt ccaaaaggtt 300 acacggaaca acagaaaatg aaagcactac caactcacgg aagaattaag aatcatttct 360 gaaagaacgt accaatagat attgtgaaaa aggatatcat tgtcccgacg gctccaaata 420 atgtgatcgt catgaaattc cggaagaatt gctttttctt t 461 // ID AB155165; SV 1; linear; genomic DNA; GSS; PLN; 462 BP. XX AC AB155165; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T20969T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3716. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-462 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 6831c3ec8c8790d29830ed3651781255. XX FH Key Location/Qualifiers FH FT source 1..462 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3716" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T20969T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 462 BP; 164 A; 86 C; 83 G; 128 T; 1 other; gcctaatgga cacaagtaaa ttcagtcagt aagatacatt ctcagctaaa taacagaagg 60 aaagaaaatg agaaaacttc accttgatca ttgccaaagt tgggttttac tgttctgcaa 120 gtccaagcaa ttctttgccc ttgtgtaaca aagaggtgaa gtctcactca gtataatagc 180 tacaatttca attgaaaaaa caatgagata cctgagaaaa gaaacatact tctcgtgtag 240 cactgcgtag tgctgccaat tcctgcatca agaaatttca gaggaaaaag gctttgtaaa 300 ttagttgaca tcgtagcttg tactatgtag caagttattt tgtttatttg gtaaacgtaa 360 gcatagcaat cgctaataac tccagaccta aacatactta cttgcggcag aaaataacct 420 canaacaatg gtctcatcta gtgcaaaatc attcaggtca gt 462 // ID AB155166; SV 1; linear; genomic DNA; GSS; PLN; 560 BP. XX AC AB155166; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21006T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3722. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-560 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 28f6a369cf38edf35a4b0e472064b7e3. XX FH Key Location/Qualifiers FH FT source 1..560 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3722" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21006T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 560 BP; 161 A; 97 C; 110 G; 192 T; 0 other; cttcaaggta tcagttagga aattcatgaa agctactagc tacaattatt gtaggaaaat 60 atgtatttaa ctttctcttg cttctatatt atgcaggtgg attttttcat ggtgttcgta 120 gtctaacttt cggaattgat atggaaaaaa tacggttgat gggtatacta caggtatacg 180 gcacacgcca ttttatacca ccaacacttt ctccatcaag aataaaaatt atagtatata 240 atgacgtatc ttcgtggttg cagagaattg caatagctta cattgtgacc gcgctatgtg 300 aaatttggct caagggagat gatgacgtag attctggatt tgatctgcta aagagaaacc 360 gttatcaact gtgagtataa aaaccaaaac cggtctaatt tttttgtgct attgttcttc 420 acgttgatga gaaattagtc ctcttattca ccttaaaata tcgtccactt ttgtatttcc 480 aggttcattg gcctgatcgt catgatcaca tacatgggct tcttgtatgg tacctacgtt 540 cctgactggg agtatcggat 560 // ID AB155167; SV 1; linear; genomic DNA; GSS; PLN; 340 BP. XX AC AB155167; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21043T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3729. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-340 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 5e39527283ac5a2fd883f94690fe727b. XX FH Key Location/Qualifiers FH FT source 1..340 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3729" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21043T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 340 BP; 116 A; 49 C; 67 G; 108 T; 0 other; gttagaagtt agttttttat agaacggagg gagcatataa aaaaaatcat gtgtttaata 60 gcttgtaaag tttgactgtg cctgagagta catacaacat taattaatta cagaaaaagt 120 catgttcata aaaagtctgc gagaactctc gtgcacaata caactgtagt atcaatcaag 180 cggtcaaaca cgtatacgta cgtttgtgcg tccatgcgca tgcagggacg acgactttgc 240 ttggattata ccacaagaaa gaccgggctt agttatgaac gttgaatata tgtatacggc 300 atatatatat atatatatat atattatatt ttttttttgg 340 // ID AB155168; SV 1; linear; genomic DNA; GSS; PLN; 622 BP. XX AC AB155168; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21054T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3732. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-622 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 3b2da38216fae5ad6108ab35b8cc9d5b. XX FH Key Location/Qualifiers FH FT source 1..622 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3732" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21054T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 622 BP; 184 A; 105 C; 115 G; 218 T; 0 other; aaaacaacta aacaagtgtc ggagtttctt attaatttat tttttgaatc tgacatacat 60 gttgccaaac ataaatgaat ctgaattctg atttgatcat ttactttaga caaaaagaac 120 tagggtcatc atttatctat tacattgaat gacattaccc acatgtaaaa tgcaaagtta 180 tctgcttgtt gaacatagct gaatagattt ttttctggcc ttccacagat agtaattaag 240 atggtagatg gggaatgtcc ttcacccaaa gcaatggccc agcatgttct gtgctacctt 300 gaagagaacg gatatttgca agcttagcat atatttgtga agattgattt gattcctgag 360 tgtcctccac tcgtggacac tagtgtgatc catttgatcc agaataagat gcatcaattt 420 gcaatcaata catgtggcct atcatcatgg gttactcgct cttgtgtagt tgtgtactgt 480 tctagcatag ctgtaatttg ttgactccgc atgcacattc cggttaaaaa tgtgtgagat 540 gtatttattc ttagtaatgt ataatttgat actggatccc aattatttgg aataaattgt 600 gcagtttaag ctctcactgt tt 622 // ID AB155169; SV 1; linear; genomic DNA; GSS; PLN; 510 BP. XX AC AB155169; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21062T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3734. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-510 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 788e7c2d9fca07c47f054a07d24a9a28. XX FH Key Location/Qualifiers FH FT source 1..510 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3734" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21062T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 510 BP; 146 A; 110 C; 102 G; 152 T; 0 other; aggtgagttc ttttagataa gagagaatca gttacctctt tgtttccatg catacaaaaa 60 ccgccgtcct gatttgaaga tattctgccc ctgaattatc aaaatggcac aaaatacaac 120 ctcccaaatt gaatctggga gatcaatacc aaaatattcg agcccatgca ccatatttgg 180 cttaactaga cgaagatgtg cagtggcata cagtgctata cagagagaga atatgaatgc 240 aaagtttcca aggaagcggg cagccagttt ccaaattgat tcttcctgtg tctgcaatga 300 gcttaaaatc tcgtctttgc ttaagttaga atcatcaggc gcaatcactt tggtcttctg 360 ggacagtact tcagtaaact gtgcatatcc ctctcggagt ccttgttttg tcccgctctc 420 gatcatccct ttcaacattg tactctggac aaagttcaga cgccaactta tagtaagatg 480 tgatgtttgt tctttagatg gcaactgtgg 510 // ID AB155170; SV 1; linear; genomic DNA; GSS; PLN; 756 BP. XX AC AB155170; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21077T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3736. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-756 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; ab59b97b10e0e07068cd48ec4e837543. XX FH Key Location/Qualifiers FH FT source 1..756 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3736" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21077T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 756 BP; 190 A; 200 C; 183 G; 178 T; 5 other; gttaatacag attgtcatat gaggagcgcc acagacaagt gctaccaaca gcacttgtaa 60 gatgctatca acttaacagc actacactaa caagttaaac gcaatcgaaa ctcgaagtaa 120 catgggaaca agagcattca caatgattca cgacacactg gtatggcagc agcttcaact 180 gtaatcaatc aatccaacac actacactac acgcaccctt cacatcgaat ccagacccag 240 tagcacccgc tctacaacgc caaaattgcc cgctcaactg cttcctgaag gctaacccac 300 ccgccacgag accctcgtta cctctagtag ccagatgatc ccgcgaaaat tcacacatag 360 aacaagccct aggtgcgggt aaactaaaag cttacttgca gagcttgagg aagttcttgg 420 tggtgagggg gcacatgtcg gtgtggaggt ccacctcgat gtcccccacg ctggtcacta 480 tgagaaccga catctccggc ggagttcccc tcccgccggc ggcaggcgca cggcggatcg 540 ccgacgaggt tttttttcct ttttttctct tttttcttcg aaaaaagatg agcgttcgat 600 ttgtttctgc ttctgggctt tcttttgtgg gaatttgcgt tgcgtggacg gatcgggaac 660 naactggaat ctggaggtgg ctaatgggcc gtgtagcggg ccacccanta ntgtcgatca 720 ggccgtttga tagngtttgg ggggcctttc ngggtg 756 // ID AB155171; SV 1; linear; genomic DNA; GSS; PLN; 733 BP. XX AC AB155171; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21104T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3739. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-733 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 646e0c342db85a905f753e985e7a2056. XX FH Key Location/Qualifiers FH FT source 1..733 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3739" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21104T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 733 BP; 197 A; 138 C; 128 G; 266 T; 4 other; ataggcttct atttgtatat ctgctaatag tatcggtact gcttctcttc tagggatggt 60 gtcagtgaag gccaattcta ccaagttctc ctctatgagt tggatgctat ccgcaaggtt 120 agatgcattt gtattttctt tactcagata ttttgtccac tttattaggt tgcctgacga 180 aatgttttct tttaggcatg tgcatctcta gaaccaaatt atcagcctcc tgtaacattc 240 gtggttgtcc aaaagcgtca ccatacaaga ctcttcgcaa acaatcacaa agacagaagt 300 agcacggaca aaagtggaaa cattttgcct ggtaattact attcatcacc tcttaaggca 360 tttcattgga tctactgcag atgataatgc aaccaacata ttgcaaaaat atttttttta 420 ttttaactaa aaccctcagt ttgttggtag aactgtttca gtgatttgat acttgttttc 480 ctattcatga tatcacattc acaactgttt ttcttggatt attaaggtat cactttgggt 540 gaactaactt ttatatttac tgttattcac ttgatttctg taattgctca tgtgtttgct 600 aaaaaacagg aactgttgtt gattcaaaga tctgccccca tcagagtttg atttctacct 660 ctgtagccat gctggaattc ngnaanaata ttgtaggggc cttttgtang ctgacatata 720 ctgaactgtc gtt 733 // ID AB155172; SV 1; linear; genomic DNA; GSS; PLN; 754 BP. XX AC AB155172; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21113T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3740. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-754 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; f4bdf9a796ca2883fb02ae0d39d4ce2d. XX FH Key Location/Qualifiers FH FT source 1..754 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3740" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21113T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 754 BP; 193 A; 184 C; 125 G; 241 T; 11 other; atgtgcacgg gatatgttta attcattaga taataatgat tttgactact caactttata 60 taaagaactt ctgattttga ttctgaagtt gttttcatat cttgggattc agatggcatt 120 aaattccgaa tttggtgaat tacctccaag ctcacaatct gatctttgat ttatttcccc 180 agaaatatgg aagttatatt tcattctaac gaaatttccc cacttcatgc aactcatttc 240 ttgtgttcat tcacaacctt ctgtcctcga ggttggctca ttgcatactg gttcgtcgct 300 ctcctcttct tttccaattc tccaggacca ctgtgcctaa gcctaatcgt gttcctcgat 360 caacctctct catccacagg tgcccacgat tcaccgtcat agccctaaaa tcgctgctgc 420 ccttgacttc ctcccatagt ccaccagtaa tcaccgcctg tcaggggtcg tcaacgtcct 480 atcccggtct ccacctccac tcgcgctctg tcggacgact cgaacccctt caacaagggg 540 gaaccattat ctaaccatgt tgaagaagaa atgaaaatat ttaatatttc ctgacgctga 600 ggatgaaatg aaaatattgt ggtctactga tgtatgtatc gatttgtgga tccttttttt 660 ctctcatngg aatactgnta aaaatcattc ncaacacagt gttgctgact ctgaaaaaaa 720 tactgccngg gggcnnnntn naanccctat taaa 754 // ID AB155173; SV 1; linear; genomic DNA; GSS; PLN; 264 BP. XX AC AB155173; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21117T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3740. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-264 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 8aee4873c6de803992004d5252cfeccb. XX FH Key Location/Qualifiers FH FT source 1..264 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3740" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21117T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 264 BP; 79 A; 48 C; 51 G; 86 T; 0 other; cagagctgag aacagcaggc actacaggac acaaattaat tcagtgtgca gtcaagaaac 60 agatgcactc ccttttactt acaccaacta cttcggttca cctaatcttg tttgccgatg 120 atgatgacat ttggatatat tgagataatt aatcaagtca tcaatgctca ctactgtgtt 180 tgatatatgt aagatgattc atgcgtcatt gagttctttc tgaagtttaa aatgggctgt 240 gcagtacatt atttactgtg tatg 264 // ID AB155174; SV 1; linear; genomic DNA; GSS; PLN; 632 BP. XX AC AB155174; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21123T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3741. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-632 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; dfcf73e9abf896788507e6c2cebdbe7b. XX FH Key Location/Qualifiers FH FT source 1..632 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3741" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21123T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 632 BP; 166 A; 118 C; 129 G; 213 T; 6 other; taggagagta tcttattggt gattggcaat tagaaaactt cctagcctct taaataactc 60 ccctcaccag tgatttctct ctgttcagga cttcatatat gaggatgagc tcaacaattt 120 tgttgagacc ggtgcgctgt ctgaattgat tgtagccttt tctcgtgagg gtccttcaaa 180 ggagtatgtt cagcacaaaa tggcagagaa ggtacatgaa atgatccttt ttgtttaata 240 taaggtgtag tgttttattt ccctttttca ccattgcttt gtaatattcc caggctcccg 300 agatttggag catcatttct cagggtggtt atatttatgt ctgtggtgat gcaaagggca 360 tggcaagana tgtacaccgc acactacaca ccattgtgca ggaacaggta ttgtttgggt 420 atatcattac ctttggtacc tgttagattc anttaattct tagtgggagg atgcantggt 480 gctctacctc taaaaagttt gcactttctt gattgaggtc aaaacanatc canaactctg 540 tcccttanta tttatcacct agagaactgt taacctgaca ctttgtccat acatcaagaa 600 acttgagaaa ttatgattca cgtggagttt tt 632 // ID AB155175; SV 1; linear; genomic DNA; GSS; PLN; 559 BP. XX AC AB155175; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21139T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3742. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-559 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 6bb8c6c24904c4d653a34e237142da00. XX FH Key Location/Qualifiers FH FT source 1..559 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3742" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21139T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 559 BP; 141 A; 119 C; 140 G; 147 T; 12 other; acctcttcnt ggagtgcccc ttcacgcagc aggtatggcg ggacattggt cgcaaattca 60 gaccgcaacg tttcctacat gtgaccacag acnacactct cctcaattgg tggcgcgagc 120 aaacagatga ggcagaaaag ttgcaacaga aagggctacg ttcagcagtc ttgaccacgc 180 tttgggagat ttggatggaa aggaacgatc gcatcttcag agggaaagaa tctacaccat 240 cggcacttgc tagcaagatc atagatgagc ttcgtttgtg ggaaatggta ngtgccaagg 300 gagtgaagtg tattatgtta agagattagg cttttgtttt tttagggagt gcaggcagga 360 agaattcctc cgggaacgtc tcccctgcct tctgttctgt acagtttctc tcacttcttc 420 tataatataa aaccagcttg ctgggttctt tcaaaaaaaa actgctgcta catggggttt 480 gatttggtct gtagctnggt tcatgngngt tacaaaggct gntagncctg cccgggcgcn 540 cttnnaaacc cntattaaa 559 // ID AB155176; SV 1; linear; genomic DNA; GSS; PLN; 308 BP. XX AC AB155176; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T37326T, 3' flanking sequence of DE Tos17 insertion in rice strain NG8552. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-308 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 30d96e47e121276a4dbe2062ff7fdbb7. XX FH Key Location/Qualifiers FH FT source 1..308 FT /organism="Oryza sativa Japonica Group" FT /strain="NG8552" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T37326T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 308 BP; 71 A; 66 C; 70 G; 101 T; 0 other; gttctatgct ctgaaatacc gcagcctggt aagttactct cgctgttcaa cagcttgtta 60 atttcagtat tattgcactg agcatatctc tgaattctgt tgctacattt ctttgttgaa 120 tccaggccag cgccgtccca ttggctgtcg atggagagag cacatccaag taatggaggg 180 gaaaatatgc atcttcagca ggagaagccg tcagctgcat tcgaatttga taattttctg 240 tagttgtcat ttggcatcca tgtttgccat ggatgtgtac tatgtctaag gtttcagtac 300 ctgccctg 308 // ID AB155177; SV 1; linear; genomic DNA; GSS; PLN; 660 BP. XX AC AB155177; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21176T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3747. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-660 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 7d86f5d59113f422842cc94aae0a0825. XX FH Key Location/Qualifiers FH FT source 1..660 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3747" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21176T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 660 BP; 214 A; 132 C; 130 G; 184 T; 0 other; tctactagta ccttcgacta atcctcattc ctctccatta aggaatgcca tgacatgtcc 60 tttagtccta gactatatta ttattcagag ttaaatgaga gttccagaga agaaagatgc 120 cgtacagtta cacatggcag gggcactaga ttaggaacaa taatacatag cataaaatct 180 ttttgcacat gtgctctgac agatgcaaca ttgaaatgcc tggaaccaga agccacaaaa 240 atcatgctag tctcatgcaa agatctactc ctaccttgta atgccctctt gtcagatgca 300 atctttgaga atgacattgt atttgaagaa tgatcacatt gttaaagtta atcacccacg 360 caaaagaaag tattgaagtt aaccactggt atggtatatt gcgccacctg tttcagttgt 420 gccagctgca agtacaaatc ttgttgcaaa cagaaaaaag aaggaaatgg taggcctcct 480 gcattctatt ttctgaacaa acgtggacat cattcagaac agattgaggt gccatctgga 540 aagagctaga cagcttctat atcttgcaga acctaacctg aacattagca ttctggaagt 600 gccatttgtg gagatgctgt tcttctatca gtaaccggag aaaaaagagg ggagattttt 660 // ID AB155178; SV 1; linear; genomic DNA; GSS; PLN; 749 BP. XX AC AB155178; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21190T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3749. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-749 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 7bb750f2047aef7016cdd74bb7916873. XX FH Key Location/Qualifiers FH FT source 1..749 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3749" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21190T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 749 BP; 215 A; 164 C; 145 G; 208 T; 17 other; attagtatac ctatttggct tagcaattta tttccaattc tcttgtatta tccacctaca 60 ttctgcatca cgctcgccat ttcttggtgg gaggagacag gccgaagccg aaccaaagct 120 tgtgcaatac ataaccatgg gcggcagcgt ggcaacatct acaggctact acatgagctg 180 accagagtaa ttggatactt atcccttgtt ctaaaatgct tctcataggc gtccatgcat 240 ttggtatcat ccatttgtga attatctttg tataaaatgc ttgtgcagag caagtgattg 300 accgaatctt aacatcttct acctctgcag cagtgagtga gaggagctga atagatggca 360 agagagcagg tgcagctgct ctctgctgca tgctcctaat gtccggtgat catctgcagc 420 agccagcaga tggcaccgga gtcagatgac gttacatctc gtgtagacga ttgcgccaag 480 ccaccaagaa gtctatacca ggtacctaca agatcatgga acaaattagt atcaatcagt 540 catgaacaaa tataatccat tgtaatgcaa taatccactg ccaaacaatt gtcaacaact 600 aaaaaaaaca gctcatacaa attccccagc tggttctgtt ataattctgt taangttttt 660 ncactctnct actttttttt aggaccctna agcttcaana gttngaattt tggnaanact 720 gccgnggggn ntttnnaaan cnnntaaaa 749 // ID AB155179; SV 1; linear; genomic DNA; GSS; PLN; 449 BP. XX AC AB155179; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21191T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3749. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-449 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; bc11a62b1e94aec045bfe83c677f0f5a. XX FH Key Location/Qualifiers FH FT source 1..449 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3749" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21191T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 449 BP; 125 A; 83 C; 126 G; 115 T; 0 other; ctagcgagga gacgggagtt gaggccgaga agacagacgg ggagattgac ttggcgcaaa 60 gagtcagagg ggagagtatg cgtagcagga cgccggcacc agggccggcc ctggccctat 120 gtagccgacc gccgggggcc tatgatggtg gaggggccaa cacctaatac tagtagtcta 180 gtacctcatc cgatgttgag atcaatgatt tttattcaga attaaaggtg tgattcttgg 240 atgttcgcgc ctgagattct gaagttcatt atggatgcag attgctatcc aaatgtttta 300 gttgcctatc gaaatctatt aactgtacct atgacggtag cttcaactga aagaagtttc 360 tcaaacttga agttttgaag aactatttga gatcaactat gtcacaagaa aggttaaatg 420 gcttggctat gtgcacaatt gagaaggat 449 // ID AB155180; SV 1; linear; genomic DNA; GSS; PLN; 586 BP. XX AC AB155180; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21196T, 3' flanking sequence of DE Tos17 insertion in rice strain NF3750. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-586 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 2d9ceb2db069853953cd6426a9416e03. XX FH Key Location/Qualifiers FH FT source 1..586 FT /organism="Oryza sativa Japonica Group" FT /strain="NF3750" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21196T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 586 BP; 141 A; 131 C; 128 G; 183 T; 3 other; ttcctaacct ctcaacactc tgtcatttag ccataaattc aatccactgt ccagctaaat 60 tcctacagaa tcttgctgca gctgaagcaa atgaggttct tgatcatggc agccatcagg 120 tgggtggttc ttgcatacat tgtcgtcatc ggatgcgcca ctattgcgcg tggcgatgag 180 cagccactgt cgaggattgc gatcgagagg gcgacggttg ctgctgttga ttcagccagc 240 gtgaaggctc aaccgacagt tcttggcctg aaggtttgct gctcatttgc ttcatagaaa 300 cactgatttc ttaattgcat aattacaatg aaatctcatg cacttttacc cttttttgcg 360 gctatgtatg tttcagggtc aaagtagtga ttgggtggtg gttgaattct cccatccgaa 420 accctccaac gacgattgga ttggtgtctt ttctccttct ggattcaggt canctgcaag 480 catgtgttga tttgcatata tcttgtcnaa attgngtact aaaactataa atggaacgat 540 ggcatcattc aatgtctgaa catttttacc tcctgaaata tgccca 586 // ID AB155181; SV 1; linear; genomic DNA; GSS; PLN; 110 BP. XX AC AB155181; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T01210T, 3' flanking sequence of DE Tos17 insertion in rice strain NC0106. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-110 RA Miyao A., Miyazaki A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 502f4b50b80cd6c80d3b1b7097e1c693. XX FH Key Location/Qualifiers FH FT source 1..110 FT /organism="Oryza sativa Japonica Group" FT /strain="NC0106" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T01210T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 110 BP; 24 A; 24 C; 25 G; 33 T; 4 other; ctcctttctt tgcaggatcc acntnattgg catgaaatcc ttgcgtantt ccatgggtct 60 gaanttcaga attacttcaa gccgtatggt cgaggataac ctgggcaggt 110 // ID AB155182; SV 1; linear; genomic DNA; GSS; PLN; 572 BP. XX AC AB155182; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21244T, 3' flanking sequence of DE Tos17 insertion in rice strain NF4002. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-572 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 181c206b2f2f1ccef4308001d57ac35d. XX FH Key Location/Qualifiers FH FT source 1..572 FT /organism="Oryza sativa Japonica Group" FT /strain="NF4002" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21244T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 572 BP; 121 A; 154 C; 146 G; 151 T; 0 other; ttctctacag ccgccgccct ttgccaacta catgcatgcc gacattactt cctacacggt 60 ggttgacagc tccactatct atgtttcttc catggagcca gatgctactt atgcctttga 120 cacagtgggg cgtcagtggc gtcgcctggg ctgctggaca atgccattcg atggcaaagc 180 tgagtatgtg ccggagctca agctgtggtt cggactatcc gtcgaccacc cctacagctt 240 atgcgcttgt gatctcctct ccgatgcagc aaagccaccc acggtgcagc agcagcacac 300 ttgggtggac ctcgacatac ctgaatcctg gttgccctat aacattgacc tcatcaacct 360 gggctgtggc aggttttgcg tcgtcaagat tttccgttct attgcaggtg actgcacatt 420 gggtttctcc gattacgatg acgatgacac aatggactct gacccgattc aggggaaatt 480 cgctgtctta actggcctac agatggttgg accttgtggt aaagatggtg atgatcaagg 540 tggtgtccgg atgatcaagc acaagtccat gt 572 // ID AB155183; SV 1; linear; genomic DNA; GSS; PLN; 451 BP. XX AC AB155183; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21239T, 3' flanking sequence of DE Tos17 insertion in rice strain NF4002. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-451 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; aaf90893ce0985ca04ad4e9a713aa2aa. XX FH Key Location/Qualifiers FH FT source 1..451 FT /organism="Oryza sativa Japonica Group" FT /strain="NF4002" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21239T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 451 BP; 123 A; 95 C; 102 G; 131 T; 0 other; catataaggc acaagaatgc gtaggatatg ctactgcctc acaaactgca tttgtacgct 60 gtcttgcttg ttctgaaaga agccgtcatc agcggtaagc atctcacact gctgtaatgt 120 gactgtccat gcatttgact tcatctacat cttctgccac aatacttaaa ttattaagag 180 tattaattat gcagcatcaa gaatttggaa ataatctctg tttgacttgc attccttagc 240 taatgggctg tgcagctagc agggagaaga atggaagggg agaaacatgc ctcggtggct 300 ctgtaggatg gactgcctgg agggctgcgc catcaggttt cttgagttca tgactgctct 360 gattagcata agtggtcgcc atttcatatt ttccacttat gctcagtcgc ccacttctct 420 agagtaacag aaaataagaa atggcgagca t 451 // ID AB155184; SV 1; linear; genomic DNA; GSS; PLN; 594 BP. XX AC AB155184; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21256T, 3' flanking sequence of DE Tos17 insertion in rice strain NF4004. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-594 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 00cce6e7192b09ba2fa42ef2ec6fb0b5. XX FH Key Location/Qualifiers FH FT source 1..594 FT /organism="Oryza sativa Japonica Group" FT /strain="NF4004" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21256T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 594 BP; 165 A; 113 C; 129 G; 187 T; 0 other; ggcacaacag tcagggttcg ttcagtcagt tctcagctcc ctgtagcttc agataggatt 60 cttaattggt tggcaatata ttagtatgat tcttaatcat gcatctctcg gatggatgga 120 tcgatcgaca agctccattg attctgaatt ttccatgtgg ccggcatatg cctatatgtt 180 tatatcatta tattggaaac tgaagtacgt actgaactgt cgtttgttcg tagcctaagc 240 cgactatatc aaatactgca tattaattaa tcagtagatt attgaaccaa cagcacgaac 300 tcgagtcgat attaatcaat cgagaaaaaa cagtggctat acttaacaca agtacgagac 360 aaacggagca tgtacgtgat tgtcgtctga aactgtggat taattatgtc tgcatcagtt 420 aggaatttgc acggttttca gggacagaca ttaattaatt tcttgatctg atgacaatgc 480 gcggaatgcc ctctcttctc tgcagcttct ttcagcttgg ttctttgtca gatagcacta 540 agatcgaacg gtgattcggt acacgagttg ccggtgaagt gtcgatgtga gatt 594 // ID AB155185; SV 1; linear; genomic DNA; GSS; PLN; 485 BP. XX AC AB155185; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21258T, 3' flanking sequence of DE Tos17 insertion in rice strain NF4005. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-485 RA Miyao A., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 41fefe6c04197ef21dd35da5a8427ab5. XX FH Key Location/Qualifiers FH FT source 1..485 FT /organism="Oryza sativa Japonica Group" FT /strain="NF4005" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21258T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 485 BP; 143 A; 98 C; 96 G; 145 T; 3 other; ggttccacna tcgggcaagt atcccggtgg gattgattgc accttgatcg cctgcaacac 60 caacctgcaa gnaaccgtga tgatgattaa ncaattcgac ctgaaaactt ctgttaaatt 120 ctagtactgt gttgttaaat atcaagtgaa gcaataaggg atcagtctat agatagagcc 180 atagagaggt gttacgtgtt acccacgctt tcttcaattc ttctccattc tgtttctatg 240 cctttgtcga cgatgaatca tgaccatata gttcagtaag ctcaaaattt ctctgttcat 300 ctctaatgag aacccaacaa aggaacagat gcagtaacct tgcagatttg cctgtaaaac 360 gtgttgccgt tggcacacct agcagaaatt ggaccgcata gtggtgttgg attctacttt 420 agatgaaaat taagttcgaa ccaaaccatt ggtgccatga ttaattgatt ttaagttatt 480 acaaa 485 // ID AB155186; SV 1; linear; genomic DNA; GSS; PLN; 330 BP. XX AC AB155186; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21263T, 3' flanking sequence of DE Tos17 insertion in rice strain NF4005. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-330 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; b41678980bcbd1faf375c9e21fb9407c. XX FH Key Location/Qualifiers FH FT source 1..330 FT /organism="Oryza sativa Japonica Group" FT /strain="NF4005" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21263T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 330 BP; 99 A; 55 C; 65 G; 110 T; 1 other; ctctggatgc tgctgattct tttttttata aggacttgtg tttttcttct ttcaaaattg 60 tncaactatc taaggtcaga tgaccattgc actaacccag ttgtattgct gtcgactgtc 120 gtgtgccgta tgatagaagt attggtctaa aggcaacgtc tttaaagagg acagaggaaa 180 gcaatgagag ccaggtacat ttcagttcct tgtccatatc acatgttggt ttatctcagc 240 attgactttg aatattctta gtcaagaaac agaactagtg gaacagataa aatacagatt 300 gttttcaaaa cattaaattg agtaacagat 330 // ID AB155187; SV 1; linear; genomic DNA; GSS; PLN; 260 BP. XX AC AB155187; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21281T, 3' flanking sequence of DE Tos17 insertion in rice strain NF4007. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-260 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; eda92308d2acf1aa228cb6276f04255b. XX FH Key Location/Qualifiers FH FT source 1..260 FT /organism="Oryza sativa Japonica Group" FT /strain="NF4007" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21281T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 260 BP; 74 A; 38 C; 51 G; 97 T; 0 other; ggaatgaggc ctcaatttga cgttctgttc tgaaattttg atgaacaatg agattcaatc 60 ttaagtattt gtttatcaaa ttttgtagtt ccagattgat cctatgaact gaaatttctg 120 ttagacacag gtgttcatat acaacatgct agattgctat ggccatgtag gattcagttc 180 ttacaaaccg atgaagtaga tcctagaggg gtttcattgt tatttttggg taatccaaat 240 ttacaggtgt tttactttac 260 // ID AB155188; SV 1; linear; genomic DNA; GSS; PLN; 621 BP. XX AC AB155188; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21289T, 3' flanking sequence of DE Tos17 insertion in rice strain NF4008. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-621 RA Miyao A., Machida Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 3f6e53c6b3431d395c8afbf6b927bd23. XX FH Key Location/Qualifiers FH FT source 1..621 FT /organism="Oryza sativa Japonica Group" FT /strain="NF4008" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21289T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 621 BP; 155 A; 128 C; 132 G; 205 T; 1 other; gccaacatgc tgttcttgga ctcccccgcc ggcgtcggct actcctactc caacaccacc 60 tccgatctgt tcactgctgg tgataacaag acaggtgaac tggaagcaat tcaacttctt 120 gtttagtgct gctaggagca tagtgccaat tttttttctt gctctgatgc taattgctgg 180 tgtgcagctc atgattcata tgctttcttg gtgaattggt tggaacggtt tccgcagtac 240 aagtaccgtg atttctacat cgcaggcgag agctatggag gtgaatttca atcataatcg 300 gttaattatg agataggagc tttgcacttt agcaaattgc agatatgcta ctgtctttat 360 gtttcagcat attcattcct gctgcaatga ctgctttttc agggcactat gtccctcagt 420 tgtctcagct agtgtaccgg aataacaaag acgttgaaaa gcctatccta aactttaaag 480 gctttatggt gagaactttg tgtgatctct tttcctcaaa tgaactgtgt gatctctgaa 540 aatataaatt tngtctggtc gctttctact tatgaatgat aaaatggtac tccaaattta 600 ctaggttgga aatgcggtaa t 621 // ID AB155189; SV 1; linear; genomic DNA; GSS; PLN; 584 BP. XX AC AB155189; XX DT 23-DEC-2003 (Rel. 78, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 2) XX DE Oryza sativa Japonica Group DNA, clone:T21319T, 3' flanking sequence of DE Tos17 insertion in rice strain NF4011. XX KW genome survey sequence; GSS. XX OS Oryza sativa Japonica Group (Japanese rice) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. XX RN [1] RP 1-584 RA Miyao A., Miyazaki A., Yamashita Y., Hirochika H.; RT ; RL Submitted (19-DEC-2003) to the INSDC. RL Contact:Akio Miyao National Institute of Agrobiological Sciences, Molecular RL Genetics; 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan URL RL :http://tos.nias.affrc.go.jp/ XX RN [2] RX DOI; 10.1105/tpc.012559. RX PUBMED; 12897251. RA Miyao A., Tanaka K., Murata K., Sawaki H., Takeda S., Abe K., Shinozuka Y., RA Onosato K., Hirochika H.; RT "Target site specificity of the Tos17 retrotransposon shows a preference RT for insertion within genes and against insertion in retrotransposon-rich RT regions of the genome"; RL Plant Cell 15(8):1771-1780(2003). XX DR MD5; 386909189322f08e0ba0c344c3c7d181. XX FH Key Location/Qualifiers FH FT source 1..584 FT /organism="Oryza sativa Japonica Group" FT /strain="NF4011" FT /cultivar="Nipponbare" FT /mol_type="genomic DNA" FT /clone_lib="PCR product directly amplified from rice FT genomic DNA" FT /clone="T21319T" FT /note="The 3' end of retrotransposon Tos17 was found FT immediately upstream of this sequence." FT /db_xref="taxon:39947" XX SQ Sequence 584 BP; 187 A; 110 C; 130 G; 156 T; 1 other; ttatctttct gcacattttt accgaatatg gtatggttag gttgccttta cataatacag 60 gaccagaagc tccagctctt acagagcaag gcgcaaccag ccatgcacca ctggaacgtc 120 gtctatgggg gccaaggcac tcgtatattg gtaaagaatc gaatgagctc tcattgaacg 180 gtaggggatt tactgaatca ttgatgctca gatcaggaac agaagctgca gatcgtgtag 240 agcaatgtgc agaacagtca tgcaatactg gaactactac attggtaaga atcgagtgag 300 ttctccttga acgggcaaat gaccagataa actttgacaa acattga