ID KC345787; SV 1; circular; genomic DNA; STD; HUM; 16568 BP. XX AC KC345787; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT6_179 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16568 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16568 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; de80a7960379f4aa06cf564be2c192a9. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16568 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT6_179" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="||Ani" FT /db_xref="taxon:9606" FT /haplogroup="L0d1" FT D-loop complement(join(16023..16568,1..576)) FT tRNA 577..647 FT /product="tRNA-Phe" FT rRNA 648..1601 FT /product="12S ribosomal RNA" FT tRNA 1602..1670 FT /product="tRNA-Val" FT rRNA 1671..3228 FT /product="16S ribosomal RNA" FT tRNA 3229..3303 FT /product="tRNA-Leu" FT gene 3306..4261 FT /gene="ND1" FT CDS 3306..4261 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4260..4261,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q4GRH9" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:Q4GRH9" FT /protein_id="AGD82186.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPTTISSIPPQT" FT tRNA 4262..4330 FT /product="tRNA-Ile" FT tRNA complement(4328..4399) FT /product="tRNA-Gln" FT tRNA 4401..4468 FT /product="tRNA-Met" FT gene 4469..5510 FT /gene="ND2" FT CDS 4469..5510 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5510,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82187.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5511..5575 FT /product="tRNA-Trp" FT tRNA complement(5586..5654) FT /product="tRNA-Ala" FT tRNA complement(5656..5728) FT /product="tRNA-Asn" FT tRNA complement(5760..5825) FT /product="tRNA-Cys" FT tRNA complement(5825..5890) FT /product="tRNA-Tyr" FT gene 5903..7444 FT /gene="COX1" FT CDS 5903..7444 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B1J9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B1J9" FT /protein_id="AGD82188.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7444..7515) FT /product="tRNA-Ser" FT tRNA 7517..7584 FT /product="tRNA-Asp" FT gene 7585..8268 FT /gene="COX2" FT CDS 7585..8268 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /protein_id="AGD82189.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8294..8363 FT /product="tRNA-Lys" FT gene 8365..8571 FT /gene="ATP8" FT CDS 8365..8571 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82190.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8526..9206 FT /gene="ATP6" FT CDS 8526..9206 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B185" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B185" FT /protein_id="AGD82191.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9206..9989 FT /gene="COX3" FT CDS 9206..9989 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9989,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82192.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9990..10057 FT /product="tRNA-Gly" FT gene 10058..10403 FT /gene="ND3" FT CDS 10058..10403 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10403,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82193.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWAE" FT tRNA 10404..10468 FT /product="tRNA-Arg" FT gene 10469..10765 FT /gene="ND4L" FT CDS 10469..10765 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AGD82194.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10759..12136 FT /gene="ND4" FT CDS 10759..12136 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12136,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82195.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12137..12205 FT /product="tRNA-His" FT tRNA 12206..12264 FT /product="tRNA-Ser" FT tRNA 12265..12335 FT /product="tRNA-Leu" FT gene 12336..14147 FT /gene="ND5" FT CDS 12336..14147 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q4F0F4" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q4F0F4" FT /protein_id="AGD82196.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPTSPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14148..14672) FT /gene="ND6" FT CDS complement(14148..14672) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /db_xref="GOA:Q4F0F3" FT /db_xref="InterPro:IPR001457" FT /db_xref="UniProtKB/TrEMBL:Q4F0F3" FT /protein_id="AGD82197.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNNVGSWMIYEGEGPGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14673..14741) FT /product="tRNA-Glu" FT gene 14746..15886 FT /gene="CYTB" FT CDS 14746..15886 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15886,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:A4ZL12" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:A4ZL12" FT /protein_id="AGD82198.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLLLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15887..15952 FT /product="tRNA-Thr" FT tRNA complement(15954..16022) FT /product="tRNA-Pro" XX SQ Sequence 16568 BP; 5130 A; 5183 C; 2165 G; 4090 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcgaac atacctacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tattttcccc tcccactccc atactactaa 480 tctcatcaat acaaccccgc ccatcctacc cagcacacac acaccgctgc taaccccata 540 ccccgaacca accaaacccc aaagacaccc cccacagttt atgtagctta cctcctcaaa 600 gcaatacact gaaaatgttt agacgggctc acatcacccc ataaacaaat aggtttggtc 660 ctagcctttc tattagctct tagtaagatt acacatgcaa gcatccccgt tccagtgaat 720 tcaccctcta aatcaccacg atcaaaaggg acaagcatca agcacgcaac aatgcagctc 780 aaaacgctta gcctagccac acccccacgg gaaacagcag tgataaacct ttagcaataa 840 acgaaagttt aactaagcta tactaacccc agggttggtc aatttcgtgc cagccaccgc 900 ggtcacacga ttaacccaag tcaatagaag ccggcgtaaa gagtgtttta gatcaccccc 960 tccccaataa agctaaaact cacctgagtt gtaaaaaact ccagttgaca caaaataaac 1020 tacgaaagtg gctttaacat atctgaatac acaatagcta agacccaaac tgggattaga 1080 taccccacta tgcttagccc taaacctcaa cagttaaatc aacaaaactg ctcgccagaa 1140 cactacgagc cacagcttaa aactcaaagg acctggcggt gcttcatatc cctctagagg 1200 agcctgttct gtaatcgata aaccccgatc aacctcacca cctcttgctc agcctatata 1260 ccgccatctt cagcaaaccc tgatgaaggc tacaaagtaa gcgcaagtac ccacgtaaag 1320 acgttaggtc aaggtgtagc ccatgaggtg gcaagaaatg ggctacattt tctaccccag 1380 aaaactacga tagcccttat gaaacttaag ggtcgaaggt ggatttagca gtaaactaag 1440 agtagagtgc ttagttgaac agggccctga agcgcgtaca caccgcccgt caccctcctc 1500 aagtatactt caaaggacat ttaactaaaa cccctacgca tttatataga ggagacaagt 1560 cgtaacatgg taagtgtact ggaaagtgca cttggacgaa ccagagtgta gcttaacaca 1620 aagcacccaa cttacactta ggagatttca acttaacttg accgctctga gctaaaccta 1680 gccccaaacc cactccacct tactaccaga caaccttagc caaaccattt acccaaataa 1740 agtataggcg atagaaattg aaacctggcg caatagatat agtaccgcaa gggaaagatg 1800 aaaaattata accaagcata atatagcaag gactaacccc tataccttct gcataatgaa 1860 ttaactagaa ataactttgc aaggagagcc aaagctaaga cccccgaaac cagacgagct 1920 acctaagaac agctaaaaga gcacacccgt ctatgtagca aaatagtggg aagatttata 1980 ggtagaggcg acaaacctac cgagcctggt gatagctggt tgtccaagat agaatcttag 2040 ttcaacttta aatttgccca cagaaccctc taaatcccct tgtaaattta actgttagtc 2100 caaagaggaa cagctctttg gacactagga aaaaaccttg tagagagagt aaaaaattta 2160 acacccatag taggcctaaa agcagccacc aattaagaaa gcgttcaagc tcaacaccca 2220 ctacctaaaa aatcccaaac atataactga actcctcaca cccaattgga ccaatctatc 2280 accctataga agaactaatg ttagtataag taacatgaaa acattctcct ccgcataagc 2340 ctgcgtcaga ttaaaacact gaactgacaa ttaacagccc aatatctaca atcaaccaac 2400 aagtcattat taccctcact gtcaacccaa cacaggcatg ctcataagga aaggttaaaa 2460 aaagtaaaag gaactcggca aatcttaccc cgcctgttta ccaaaaacat cacctctagc 2520 atcaccagta ttagaggcac cgcctgccca gtgacacatg tttaacggcc gcggtaccct 2580 aaccgtgcaa aggtagcata atcacttgtt ccttaaatag ggacctgtat gaatggctcc 2640 acgagggttc agctgtctct tacttttaac cagtgaaatt gacctgcccg tgaagaggcg 2700 ggcataacac agcaagacga gaagacccta tggagcttta atttattaat gcaaacaata 2760 cctaacaaac ccacaggtcc taaactacca aacctgcatt aaaaatttcg gttggggcga 2820 cctcggagca gaacccaacc tccgagcagt acatgctaag acttcaccag tcaaagcgaa 2880 ctaccatact caattgatcc aataacttga ccaacggaac aagttaccct agggataaca 2940 gcgcaatcct attctagagt ccatatcaac aatagggttt acgacctcga tgttggatca 3000 ggacatcccg atggtgcagc cgctattaaa ggttcgtttg ttcaacgatt aaagtcctac 3060 gtgatctgag ttcagaccgg agtaatccag gtcggtttct atctacttca aattcctccc 3120 tgtacgaaag gacaagagaa ataaggccta cttcacaaag cgccttcccc cgtaaatgat 3180 atcatctcaa cttagtatta tacccacacc cacccaagaa cagggtttgt taagatggca 3240 gagcccggta atcgcataaa acttaaaact ttacagtcag aggttcaatt cctcttctta 3300 acaacatacc catggccaac ctcctactcc tcattgtacc cattctaatc gcaatggcat 3360 tcctaatgct taccgaacga aaaattctag gctatataca actacgcaaa ggccccaacg 3420 ttgtaggccc ctacggacta ctacaaccct tcgctgacgc cataaaactc ttcaccaaag 3480 agcccctaaa acccgccaca tctaccatca ccctatacat caccgccccg accttagctc 3540 tcaccatcgc tcttctacta tgaacccccc tccccatacc caaccccctg gttaacctca 3600 acctaggcct cctattcatt ctagccacct ctagcctagc cgtttactca atcctctgat 3660 cagggtgagc atcaaactca aactacgccc tgatcggcgc actgcgagca gtagcccaaa 3720 caatctcata tgaagtcacc ctagccatca ttctgctatc aacattacta ataagtggct 3780 cctttaacct ctccaccctt atcacaacac aagaacacct ctgattactc ctgccatcat 3840 gacccttggc cataatatga tttatctcca cactagcaga gaccaaccga acccccttcg 3900 accttgccga aggggagtcc gaactagtct caggcttcaa catcgaatac gccgcaggcc 3960 ccttcgccct attcttcata gccgaataca caaacattat tataataaac accctcacca 4020 ctacaatctt cctaggaaca acatatgacg cactctcccc tgaactctac acaacatatt 4080 ttgtcaccaa gaccctactt ctgacctccc tgttcttatg aattcgaaca gcataccccc 4140 gattccgcta cgaccaactc atacacctcc tatgaaaaaa cttcctacca ctcaccctag 4200 cattacttat atgatatgtc tccataccca ctacaatctc cagcattccc cctcaaacct 4260 aagaaatatg tctgataaaa gagttacttt gatagagtaa ataataggag tttaaacccc 4320 cttatttcta ggactatgag aatcgaaccc atccctgaga atccaaaatt ctccgtgcca 4380 cctatcacac cccatcctaa agtaaggtca gctaaataag ctatcgggcc cataccccga 4440 aaatgttggt tatacccttc ccgtactaat taatcccctg gcccaacccg tcatctactc 4500 taccatcttt gcaggcacac tcatcacagc gctaagctcg cactgatttt ttacctgagt 4560 aggcctagaa ataaacatgc tagcttttat tccagttcta accaaaaaaa taaaccctcg 4620 ttccacagaa gctgccatca agtatttcct cacgcaagca accgcatcca taatccttct 4680 aatagctatc ctcttcaaca atatactctc cggacaatga accataacca atactaccaa 4740 tcaatactca tcattaataa tcataatggc tatagcaata aaactaggaa tagccccctt 4800 tcacttctga gtcccagagg ttacccaagg cacccctctg acatccggcc tgcttcttct 4860 cacatgacaa aaactagccc ccatctcaat catataccaa atctctccct cactaaacgt 4920 aagccttctc ctcactctct caatcttatc catcatagca ggcagttgag gtggattaaa 4980 ccaaacccag ctacgcaaaa tcttagcata ctcctcaatt acccacatag gatgaataat 5040 agcagttcta ccgtacaacc ctaacataac cattcttaat ttaactattt atattatcct 5100 aactactacc gcattcctac tactcaactt aaactccagc accacgaccc tactactatc 5160 tcgcacctga aacaagctaa catgactaac acccttaatt ccatccaccc tcctctccct 5220 aggaggcctg cccccgctaa ccggcttttt gcccaaatgg gccattatcg aagaattcac 5280 aaaaaacaat agcctcatca tccccaccat catagccacc atcaccctcc ttaacctcta 5340 cttctaccta cgcctaatct actccacctc aatcacacta ctccccatat ctaacaacgt 5400 aaaaataaaa tgacagtttg aacatacaaa acccacccca ctcctcccca cactcatcgc 5460 ccttaccacg ctactcctac ctatctcccc ttttatacta ataatcttat agaaatttag 5520 gttaaataca gaccaagagc cttcaaagcc ctcagtaagt tgcaatactt aatttctgta 5580 acagctaagg actgcaaaac cccactctgc atcaactgaa cgcaaatcag ccactttaat 5640 taagctaagc ccttactaga ccaatgggac ttaaacccac aaacacttag ttaacagcta 5700 agcaccctaa tcaactggct tcaatctact tctcccgccg ccgggaaaaa aggcgggaga 5760 agccccggca ggtttgaagc tgcttcttcg aatttgcaat tcaatatgaa aatcacctcg 5820 gagctggtaa aaagaggcct aacccctgtc tttagattta cagtccaatg cttcactcag 5880 ccattttacc tcacccccac tgatgttcgc cgaccgttga ctattctcta caaaccacaa 5940 agacattgga acactatacc tattattcgg cgcatgagct ggagtcctag gcacagctct 6000 aagcctcctt attcgagccg agctgggcca gccaggcaac cttctaggta acgaccacat 6060 ctacaacgtt atcgtcacag cccatgcatt tgtaataatc ttcttcatag taatacccat 6120 cataatcgga ggctttggca actgactagt tcccctaata atcggtgccc ccgatatggc 6180 gttcccccgc ataaacaaca taagcttctg actcttacct ccctctctcc tactcctgct 6240 cgcatctgct atagtggagg ccggggcagg aacaggttga acagtctacc ctcccttagc 6300 agggaactac tcccaccctg gagcctccgt agacctaacc atcttctcct tacacctagc 6360 aggtgtctcc tctatcttag gggccatcaa tttcatcaca acaattatca atataaaacc 6420 ccctgccata acccaatacc aaacgcccct cttcgtctga tccgtcctaa tcacagcagt 6480 cctacttctc ctatctctcc cagtcctagc tgctggcatc actatactac taacagaccg 6540 caacctcaac accaccttct tcgaccccgc cggaggagga gaccccattc tataccaaca 6600 cctattctga tttttcggtc accctgaagt ttatattctt atcctaccag gcttcggaat 6660 aatctcccat attgtaactt actactccgg gaaaaaagaa ccatttggat acataggtat 6720 ggtctgagct atgatatcaa ttggcttcct agggtttatc gtgtgagcac accatatatt 6780 tacagtagga atagacgtag acacacgagc atacttcacc tccgctacca taatcatcgc 6840 tatccccacc ggcgtcaaag tatttagctg actcgccaca ctccacggaa gcaatatgaa 6900 atgatctgct gcagtgctct gagccctagg attcatcttt cttttcaccg taggtggcct 6960 gactggcatt gtattagcaa actcatcact agacatcgta ctacacgaca cgtactacgt 7020 tgtagctcac ttccactatg tcctatcaat aggagctgta tttgccatca taggaggctt 7080 cattcactga tttcccctat tctcaggcta caccctagac caaacctacg ccaaaatcca 7140 tttcgctatc atattcatcg gcgtaaatct aactttcttc ccacaacact ttctcggcct 7200 atccggaatg ccccgacgtt actcggacta ccccgatgca tacaccacat gaaatatcct 7260 atcatctgta ggctcattca tctctctaac agcagtaata ttaataattt tcatgatttg 7320 agaagccttc gcttcgaagc gaaaagtcct aatagtagaa gaaccctcca taaacctgga 7380 gtgactatat ggatgccccc caccctacca cacattcgaa gaacccgtat acataaaatc 7440 tagacaaaaa aggaaggaat cgaacccccc aaagctggtt tcaagccaac cccatggcct 7500 ccatgacttt ttcaaaaaga tattagaaaa accatttcat aactttgtca aagttaaatt 7560 ataggctaaa tcctatatat cttaatggca catgcagcgc aagtaggtct acaagacgct 7620 acttccccta tcatagaaga gcttatcacc tttcatgatc acgccctcat aatcattttc 7680 cttatctgct tcctagtcct gtatgccctt ttcctaacac tcacaacaaa actaactaat 7740 actaacatct cagacgctca ggaaatagaa accgtctgaa ctatcctgcc cgccatcatc 7800 ctagtcctca tcgccctccc atccctacgc atcctttaca taacagacga ggtcaacgat 7860 ccctccctta ccatcaaatc aattggccac caatggtact gaacctacga gtacaccgac 7920 tacggcggac taatcttcaa ctcctacata cttcccccat tattcctaga accaggcgac 7980 ctgcgactcc ttgacgttga caatcgagta gtactcccga ttgaagcccc cattcgtata 8040 ataattacat cacaagacgt cttgcactca tgagctgtcc ccacattagg cttaaaaaca 8100 gatgcaattc caggacgtct aaaccaaacc actttcaccg ctacacgacc aggggtatac 8160 tacggtcaat gctctgaaat ctgtggagca aaccacagtt tcatgcccat cgtcctagaa 8220 ttaattcccc taaaaatctt tgaaatagga cccgtattta ccctatagca ccccctctac 8280 cccctctaga gcccactgta aagctaactt agcattaacc ttttaagtta aagattaaga 8340 gaaccaacac ctctttacag tgaaatgccc caactaaata ctaccgtatg gcccaccata 8400 attaccccca tactccttac actattcctc atcacccaac taaaaatatt aaacacaaac 8460 taccacttac ctccctcacc aaagcccata aaaataaaaa attataacaa accctgagaa 8520 ccaaaatgaa cgaaaatctg ttcgcttcat tcattgcccc cacaatccta ggcctacccg 8580 ccgcagtact gatcattcta tttccccctc tattgatccc cacctccaaa tatctcatca 8640 acaaccgact aattaccacc caacaatgac taatcaaact aacctcaaaa caaatgatag 8700 ccatacacaa cactaaagga cgaacctgat ctcttatact agtatcctta atcattttta 8760 ttgccacaac taacctcctc ggactcctac ctcactcatt tacaccaacc acccaactat 8820 ctataaacct agccatggcc atccccttat gagcgggcgc agtgattata ggctttcgct 8880 ctaagattaa aaatgcccta gcccacttct taccacaagg cacacctaca ccccttatcc 8940 ccatactagt tattatcgaa accatcagcc tactcattca accaatagcc ctggccgtac 9000 gcctaaccgc taacattact gcaggccacc tactcatgca tctaattgga agcgccaccc 9060 tagcaatatc aaccattaac cttccctcta cacttatcat cttcacaatt ctaattctac 9120 tgactatcct agaaatcgct gtcgccttaa tccaagccta cgttttcaca cttctagtaa 9180 gcctctacct gcacgacaac acataatgac ccaccaatca catgcctatc atatagtaaa 9240 acccagccca tgacccctaa caggggccct ctcagccctc ctaatgacct ccggcctagc 9300 catgtgattt cacttccact ccataacgct cctcatacta ggcctgctaa ccaacacact 9360 aaccatatac caatgatggc gcgatgtaac acgagaaagc acataccaag gccaccacac 9420 accacctgtc caaaaaggcc ttcgatacgg gataatccta tttattacct cagaagtttt 9480 tttcttcgca ggatttttct gagcctttta ccactccagc ctagccccta ccccccaact 9540 aggagggcac tggcccccaa caggcatcac cccgctaaat cccctagaag tcccactcct 9600 aaacacatcc gtattactcg catcaggagt atcaatcacc tgagctcacc atagtctaat 9660 agaaaacaac cgaaaccaaa taattcaagc actgcttatt acaattttac tgggtctcta 9720 ttttaccctc ctacaagcct cagagtactt cgaatctccc ttcaccattt ccgacggcat 9780 ctacggctca acattttttg tagccacagg cttccacgga cttcacgtca ttattggctc 9840 aactttcctc actatctgct tcatccgcca actaatattt cacttcacat ccaaacatca 9900 ctttggcttc gaagccgccg cctgatactg gcattttgta gatgtggttt gactatttct 9960 gtatgtctcc atctattgat gagggtctta ctcttttagt ataaatagta ccgttaactt 10020 ccaattaact agttttgaca acattcaaaa aagagtaata aacttcgcct taattttaat 10080 aatcaacacc ctcctagcct tactactaat aattattaca ttttgactac cacaactcaa 10140 cggctacata gaaaaatcca ccccttacga gtgcggcttc gaccctatat cccccgcccg 10200 cgtccctttc tccataaaat tcttcttagt agctattacc ttcttattat ttgatctaga 10260 aattgccctc cttttacccc taccatgagc cctacaaaca actaacctgc cactaatagt 10320 tatgtcatcc ctcttattaa tcatcatcct agccctaagt ctggcctatg agtgactaca 10380 aaaaggatta gactgagccg aattggtata tagtttaaac aaaacgaatg atttcgactc 10440 attaaattat gataatcata tttaccaaat gcccctcatt tacataaata ttatactagc 10500 atttaccatc tcacttctag gaatactagt atatcgctca cacctcatat cctccctact 10560 atgcctagaa ggaataatac tatcgctatt cattatagct actctcataa ccctcaacac 10620 ccactccctc ttagccaata ttgtgcctat tgccatacta gtttttgccg cctgcgaagc 10680 agcggtaggc ctagccctac tagtctcaat ctccaacaca tatggcctag actacgtaca 10740 taacctaaac ctactccaat gctaaaacta atcgtcccaa caattatatt actaccactg 10800 acatgactct ccaaaaaaca cataatttga atcaacacaa ccacccacag cctaattatt 10860 agcatcatcc ccctactatt ttttaaccaa atcaacaaca acctatttag ctgctcccca 10920 accttttcct ccgaccccct aacaaccccc ctcctaatac taactacctg actcctaccc 10980 ctcacaatca tggcaagcca acgccactta tccagtgaac cactatcacg aaaaaaactc 11040 tacctctcta tactaatctc cctacaaatc tccttaatta taacattcac agccacagaa 11100 ctaatcatat tttatatctt cttcgaaacc acacttatcc ccaccttggc tatcatcacc 11160 cgatgaggca accagccaga acgcctgaac gcaggcacat acttcctatt ctacacccta 11220 gtaggctccc ttcccctact catcgcacta atttacactc acaacaccct aggctcacta 11280 aacattctac tactcactct cactgcccaa gaactatcaa actcctgagc caacaactta 11340 atatgactag cttacacaat agcttttata gtaaagatac ctctttacgg actccactta 11400 tgactcccta aagcccatgt cgaagccccc atcgctgggt caatagtact tgccgcagta 11460 ctcttaaaac taggcggcta tggtataata cgcctcacac tcattctcaa ccccctgaca 11520 aaacacatag cctacccctt ccttgtacta tccctatgag gcataattat aacaagctcc 11580 atctgcctac gacaaacaga cctaaaatcg ctcattgcat actcttcaat cagccacata 11640 gccctcgtag taacagccat tctcatccaa accccctgaa gcttcaccgg cgcagtcatt 11700 ctcataatcg cccacggact tacatcctca ttactattct gcctagcaaa ctcaaactac 11760 gaacgcactc acagtcgcat cataatcctc tctcaaggac ttcaaactct actcccacta 11820 atagcttttt gatgacttct agcaagcctc gctaacctcg ccttaccccc cactattaac 11880 ctactgggag aactctctgt gctagtaacc acattctcct gatcaaatat cactctccta 11940 cttacaggac tcaacatact agtcacagcc ctatactccc tctacatatt taccacaaca 12000 caatgaggct cactcaccca ccacattaac aacataaaac cctcattcac acgagaaaac 12060 accctcatgt tcatacacct atcccccatt ctcctcctat ccctcaaccc cgacatcatc 12120 accgggtttt cctcttgtaa atatagttta accaaaacat cagattgtga atctgacaac 12180 agaggcttac gaccccttat ttaccgagaa agctcacaag aactgctaac tcatgccccc 12240 atgtctaaca acatggcttt ctcaactttt aaaggataac agctatccat tggtcttagg 12300 ccccaaaaat tttggtgcaa ctccaaataa aagtaataac catgcacact actataacca 12360 ccctaaccct gacttcccta attcccccca tccttaccac cctcgttaac cctaacaaaa 12420 aaaactcata cccccattat gtaaaatcca ttgtcgcatc cacctttatt atcagtctct 12480 tccccacaac aatattcatg tgcctagacc aagaagttat tatctcgaac tgacactgag 12540 ccacaaccca aacaacccag ctctccctaa gcttcaaact agactacttc tccataatat 12600 tcatccctgt agcattgttc gttacatggt ccatcataga attctcactg tgatatataa 12660 actcagaccc aaacattaat cagttcttca aatatctact cattttccta attaccatgc 12720 taatcttagt taccgctaac aacctattcc aactgttcat cggctgagag ggcgtaggaa 12780 ttatatcctt cttgctcatc agttgatgat acgcccgagc agatgccaac acagcagcca 12840 ttcaagcaat cctatacaac cgtatcggcg atatcggttt catcctcgcc ttagcatgat 12900 ttatcctaca ctccaactca tgagacccac aacaaatagc ccttctaaac gctaatccaa 12960 gcctcacccc actactaggc ctcctcctag cagcagcagg caaatcagcc caattaggtc 13020 tccacccctg actcccctca gccatagaag gccccacccc agtctcagcc ctactccact 13080 caagcactat agttgtagca ggagtcttct tactcatccg cttccacccc ctagcagaaa 13140 atagcccact aatccaaact ctaacactat gcttaggcgc tatcaccact ctgttcgcag 13200 cagtctgcgc ccttacacaa aatgacatca aaaaaatcgt agccttctcc acttcaagtc 13260 aactaggact catagtagtt acaatcggca tcaaccaacc acacctagca ttcctgcaca 13320 tctgtaccca cgccttcttc aaagccatac tatttatgtg ctccgggtcc atcatccaca 13380 accttaacaa tgaacaagat attcgaaaaa taggaggact actcaaaacc atacctctca 13440 cttcaacctc cctcaccatt ggcagcctag cattagcagg aatacctttc ctcacaggtt 13500 tctattccaa agaccacatc atcgaaaccg caaacatatc atacacaaac gcctgagccc 13560 tatctattac tctcatcgct acctccctga caagcgccta tagcactcga ataattcttc 13620 tcaccctaac aggtcaacct cgcttcccta cccttactaa cattaacgaa aataacccca 13680 ccctactaaa ccccattaaa cgcctggcag ccggaagcct attcgcagga tttctcatta 13740 ctaacaacat ttcccccaca tcccccttcc aaacaacaat ccccctctac ctaaaactca 13800 cagccctcgc tgtcactttc ctaggacttc taacagccct agacctcaac tacctaacca 13860 acaaacttaa aataaaatcc ccactatgca cattttattt ctccaacata ctcggattct 13920 accctagcat cacacaccgc acaatcccct atctaggcct tcttacgagc caaaacctgc 13980 ccctactcct cctagaccta acctgactag aaaagctatt acctaaaaca atttcacagc 14040 accaaatctc cacctccatc atcacctcaa cccaaaaagg cataattaaa ctttacttcc 14100 tctctttctt cttcccactc atcctaaccc tactcctaat cacataacct attcccccga 14160 gcaatctcaa ttacaatata tacaccaaca aacaatgttc aaccagtaac tactactaat 14220 caacgcccat aatcatacaa agcccccgca ccaataggat cctcccgaat caaccctggc 14280 ccctctcctt cataaattat tcagcttcct acattattaa agtttaccac aaccaccacc 14340 ccatcatact ctttcaccca cagcaccaat cctacctcca tcgctaaccc cactaaaaca 14400 ctcaccaaga cctcaacccc tgacccccat gcctcaggat actcctcaat agccatcgct 14460 gtagtatatc caaagacaac catcattccc cctaaataaa ttaaaaaaac tattaaaccc 14520 atataacctc ccccaaaatt cagaataata acacacccaa ccacaccgct aacaatcaat 14580 actaaacccc cataaatagg agaaggctta gaagaaaacc ccacaaaccc cattactaaa 14640 cccacactca acagaaataa agcatacatc attattctcg cacggactac aaccacgacc 14700 aatgatatga aaaaccatcg ttgtatttca actacaagaa caccaatgac cccaatacgc 14760 aaaattaacc ccctaataaa attaattaac cactcattca tcgacctccc caccccatcc 14820 aacatctccg catgatgaaa cttcggctca ctccttggcg cctgcctgat cctccaaatc 14880 accacaggac tattcctagc catgcactac tcaccagacg cctcaaccgc cttttcatca 14940 atcgcccaca tcactcgaga cgtaaattat ggctgaatca tccgctacct tcacgccaat 15000 ggcgcctcaa tattctttat ctgcctcttc ctacacatcg ggcgaggcct atattacgga 15060 tcatttctct actcagaaac ctgaaacatc ggcattatcc tcctgcttgc aactatagca 15120 acagccttca taggctatgt cctcccgtga ggccaaatat cattctgagg ggccacagta 15180 attacaaact tactatccgc catcccatac attgggacag acctagttca atgaatctga 15240 ggaggctact cagtagacag tcccaccctc acacgattct ttacctttca cttcatcttg 15300 cccttcatta ttgcagccct agcagcactc cacctcctat tcttgcacga aacgggatca 15360 aacaaccccc taggaatcac ctcccattcc gataaaatca ccttccaccc ttactacaca 15420 atcaaagacg ccctcggctt acttctcctc cttctctcct taataacatt aacactattc 15480 tcaccagacc tcctaggcga cccagacaat tataccctag ccaacccctt aaacacccct 15540 ccccacatca agcccgaatg atatttccta ttcgcctaca caattctccg atccgtccct 15600 aacaaactag gaggcgtcct tgccctatta ctatccatcc tcatcctagc aataatcccc 15660 atcctccata tatccaaaca acaaagcata atatttcgcc cactaagcca atcactttat 15720 tgactcctag ccgcagacct cctcattcta acctgaatcg gaggacaacc agtaagctac 15780 ccttttacca tcattggaca agtagcatcc gtactatact tcacaacaat cctaatccta 15840 ataccaacta tctccctaat tgaaaacaaa atactcaaat gggcctgtcc ttgtagtata 15900 aactaataca ccagtcttgt aaaccggaaa tgaaaacctc tttccaagga caaatcagag 15960 aaaaagtctt taactccacc attagcaccc aaagctaaga ttctaattta aactattctc 16020 tgttctttca tggggaagca gatttgggta ccacccaagt attgactcac ccatcaacaa 16080 ccgctatgta tttcgtacat tactgccagc caccatgaat attgtacggt accataaata 16140 cttgaccacc tatagtacat aaaaacccaa tccacatcaa aaccctcccc ccatgcttac 16200 aagcaagtac agcaatcaac cttcaactgt cacacatcaa ccgcaactcc aaagccaccc 16260 ctcacccact aggataccaa caaacctacc catccttaac agtacatagc acataaagcc 16320 atttaccgta catagcacat tacagtcaaa tcccttctcg tccccatgga tgacccccct 16380 cagatagggg tcccttgacc accatcctcc gtgaaatcaa tatcccgcac aagagtgcta 16440 ctctcctcgc tccgggccca taacacttgg ggttagctaa agtgaactgt atccgacatc 16500 tggttcctac ttcagggcca taaagcctaa atagcccaca cgttcccctt aaataagaca 16560 tcacgatg 16568 // ID KC345788; SV 1; circular; genomic DNA; STD; HUM; 16569 BP. XX AC KC345788; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT6_180 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16569 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16569 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; 8777957620e4bc1c9e8a6f6ce22319b8. DR Ensembl-Gn; ENSG00000198840; homo_sapiens. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Tr; ENST00000361227; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16569 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT6_180" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="||Ani" FT /db_xref="taxon:9606" FT /haplogroup="L0d1" FT D-loop complement(join(16024..16569,1..576)) FT tRNA 577..647 FT /product="tRNA-Phe" FT rRNA 648..1601 FT /product="12S ribosomal RNA" FT tRNA 1602..1670 FT /product="tRNA-Val" FT rRNA 1671..3229 FT /product="16S ribosomal RNA" FT tRNA 3230..3304 FT /product="tRNA-Leu" FT gene 3307..4262 FT /gene="ND1" FT CDS 3307..4262 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4261..4262,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q4GRH9" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:Q4GRH9" FT /protein_id="AGD82199.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPTTISSIPPQT" FT tRNA 4263..4331 FT /product="tRNA-Ile" FT tRNA complement(4329..4400) FT /product="tRNA-Gln" FT tRNA 4402..4469 FT /product="tRNA-Met" FT gene 4470..5511 FT /gene="ND2" FT CDS 4470..5511 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5511,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82200.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5512..5576 FT /product="tRNA-Trp" FT tRNA complement(5587..5655) FT /product="tRNA-Ala" FT tRNA complement(5657..5729) FT /product="tRNA-Asn" FT tRNA complement(5761..5826) FT /product="tRNA-Cys" FT tRNA complement(5826..5891) FT /product="tRNA-Tyr" FT gene 5904..7445 FT /gene="COX1" FT CDS 5904..7445 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B1J9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B1J9" FT /protein_id="AGD82201.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7445..7516) FT /product="tRNA-Ser" FT tRNA 7518..7585 FT /product="tRNA-Asp" FT gene 7586..8269 FT /gene="COX2" FT CDS 7586..8269 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /db_xref="GOA:Q9B1F9" FT /db_xref="InterPro:IPR001505" FT /db_xref="InterPro:IPR002429" FT /db_xref="InterPro:IPR008972" FT /db_xref="InterPro:IPR011759" FT /db_xref="InterPro:IPR014222" FT /db_xref="InterPro:IPR034210" FT /db_xref="InterPro:IPR036257" FT /db_xref="UniProtKB/TrEMBL:Q9B1F9" FT /protein_id="AGD82202.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIETPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8295..8364 FT /product="tRNA-Lys" FT gene 8366..8572 FT /gene="ATP8" FT CDS 8366..8572 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82203.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8527..9207 FT /gene="ATP6" FT CDS 8527..9207 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B185" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B185" FT /protein_id="AGD82204.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9207..9990 FT /gene="COX3" FT CDS 9207..9990 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9990,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82205.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9991..10058 FT /product="tRNA-Gly" FT gene 10059..10404 FT /gene="ND3" FT CDS 10059..10404 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10404,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXZ5" FT /db_xref="InterPro:IPR000440" FT /db_xref="InterPro:IPR038430" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ5" FT /protein_id="AGD82206.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWTE" FT tRNA 10405..10469 FT /product="tRNA-Arg" FT gene 10470..10766 FT /gene="ND4L" FT CDS 10470..10766 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:E2FR42" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:E2FR42" FT /protein_id="AGD82207.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVAISNTYGLDYVHNLNLLQC" FT gene 10760..12137 FT /gene="ND4" FT CDS 10760..12137 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12137,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82208.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12138..12206 FT /product="tRNA-His" FT tRNA 12207..12265 FT /product="tRNA-Ser" FT tRNA 12266..12336 FT /product="tRNA-Leu" FT gene 12337..14148 FT /gene="ND5" FT CDS 12337..14148 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q4F0F4" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q4F0F4" FT /protein_id="AGD82209.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPTSPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14149..14673) FT /gene="ND6" FT CDS complement(14149..14673) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82210.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14674..14742) FT /product="tRNA-Glu" FT gene 14747..15887 FT /gene="CYTB" FT CDS 14747..15887 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15887,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q15H14" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q15H14" FT /protein_id="AGD82211.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIITALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLLSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15888..15953 FT /product="tRNA-Thr" FT tRNA complement(15955..16023) FT /product="tRNA-Pro" XX SQ Sequence 16569 BP; 5133 A; 5185 C; 2163 G; 4088 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcggac atacctacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tattttcccc tcccactccc atactactaa 480 tctcatcaat acaaccccgc ccatcctacc cagcacacac acaccgctgc taaccccata 540 ccccgaacca accaaacccc aaagacaccc cccacagttt atgtagctta cctcctcaaa 600 gcaatacact gaaaatgttt agacgggctc acatcacccc ataaacaaat aggtttggtc 660 ctagcctttc tattagctct tagtaagatt acacatgcaa gcatccccgt tccagtgaat 720 tcaccctcta aatcaccacg atcaaaaggg acaagcatca agcacgcaac aatgcagctc 780 aaaacgctta gcctagccac acccccacgg gaaacagcag tgataaacct ttagcaataa 840 acgaaagttt aactaagcta tactaacccc agggttggtc aatttcgtgc cagccaccgc 900 ggtcacacga ttaacccaag tcaatagaag ccggcgtaaa gagtgtttta gatcaccccc 960 tccccaataa agctaaaact cacctgagtt gtaaaaaact ccagttgaca caaaataaac 1020 tacgaaagtg gctttaacat atctgaatac acaatagcta agacccaaac tgggattaga 1080 taccccacta tgcttagccc taaacctcaa cagttaaatc aacaaaactg ctcgccagaa 1140 cactacgagc cacagcttaa aactcaaagg acctggcggt gcttcatatc cctctagagg 1200 agcctgttct gtaatcgata aaccccgatc aacctcacca cctcttgctc agcctatata 1260 ccgccatctt cagcaaaccc tgatgaaggc tacaaagtaa gcgcaagtac ccacgtaaag 1320 acgttaggtc aaggtgtagc ccatgaggtg gcaagaaatg ggctacattt tctaccccag 1380 aaaactacga tagcccttat gaaacttaag ggtcgaaggt ggatttagca gtaaactaag 1440 agtagagtgc ttagttgaac agggccctga agcgcgtaca caccgcccgt caccctcctc 1500 aagtatactt caaaggacat ttaactaaaa cccctacgca tttatataga ggagacaagt 1560 cgtaacatgg taagtgtact ggaaagtgca cttggacgaa ccagagtgta gcttaacaca 1620 aagcacccaa cttacactta ggagatttca acttaacttg accgctctga gctaaaccta 1680 gccccaaacc cactccacct tactaccaga caaccttagc caaaccattt acccaaataa 1740 agtataggcg atagaaattg aaacctggcg caatagatat agtaccgcaa gggaaagatg 1800 aaaaattata accaagcata atatagcaag gactaacccc tataccttct gcataatgaa 1860 ttaactagaa ataactttgc aaggagagcc aaagctaaga cccccgaaac cagacgagct 1920 acctaagaac agctaaaaga gcacacccgt ctatgtagca aaatagtggg aagatttata 1980 ggtagaggcg acaaacctac cgagcctggt gatagctggt tgtccaagat agaatcttag 2040 ttcaacttta aatttgccca cagaaccctc taaatcccct tgtaaattta actgttagtc 2100 caaagaggaa cagctctttg gacactagga aaaaaccttg tagagagagt aaaaaattta 2160 acacccatag taggcctaaa agcagccacc aattaagaaa gcgttcaagc tcaacaccca 2220 ctacctaaaa aatcccaaac atataactga actcctcaca cccaattgga ccaatctatc 2280 accctataga agaactaatg ttagtataag taacatgaaa acattctcct ccgcataagc 2340 ctgcgtcaga ttaaaacact gaactgacaa ttaacagccc aatatctaca atcaaccaac 2400 aagtcattat taccctcact gtcaacccaa cacaggcatg ctcataagga aaggttaaaa 2460 aaagtaaaag gaactcggca aatccttacc ccgcctgttt accaaaaaca tcacctctag 2520 catcaccagt attagaggca ccgcctgccc agtgacacat gtttaacggc cgcggtaccc 2580 taaccgtgca aaggtagcat aatcacttgt tccttaaata gggacctgta tgaatggctc 2640 cacgagggtt cagctgtctc ttacttttaa ccagtgaaat tgacctgccc gtgaagaggc 2700 gggcataaca cagcaagacg agaagaccct atggagcttt aatttattaa tgcaaacaat 2760 acctaacaaa cccacaggtc ctaaactacc aaacctgcat taaaaatttc ggttggggcg 2820 acctcggagc agaacccaac ctccgagcag tacatgctaa gacttcacca gtcaaagcga 2880 actaccatac tcaattgatc caataacttg accaacggaa caagttaccc tagggataac 2940 agcgcaatcc tattctagag tccatatcaa caatagggtt tacgacctcg atgttggatc 3000 aggacatccc gatggtgcag ccgctattaa aggttcgttt gttcaacgat taaagtccta 3060 cgtgatctga gttcagaccg gagtaatcca ggtcggtttc tatctacttc aaattcctcc 3120 ctgtacgaaa ggacaagaga aataaggcct acttcacaaa gcgccttccc ccgtaaatga 3180 tatcatctca acttagtatt atacccacac ccacccaaga acagggtttg ttaagatggc 3240 agagcccggt aatcgcataa aacttaaaac tttacagtca gaggttcaat tcctcttctt 3300 aacaacatac ccatggccaa cctcctactc ctcattgtac ccattctaat cgcaatggca 3360 ttcctaatgc ttaccgaacg aaaaattcta ggctatatac aactacgcaa aggccccaac 3420 gttgtaggcc cctacggact actacaaccc ttcgctgacg ccataaaact cttcaccaaa 3480 gagcccctaa aacccgccac atctaccatc accctataca tcaccgcccc aaccttagct 3540 ctcaccatcg ctcttctact atgaaccccc ctccccatac ccaaccccct ggttaacctc 3600 aacctaggcc tcctattcat tctagccacc tctagcctag ccgtttactc aatcctctga 3660 tcagggtgag catcaaactc aaactacgcc ctgatcggcg cactgcgagc agtagcccaa 3720 acaatctcat atgaagtcac cctagccatc attctgctat caacattact aataagtggc 3780 tcctttaacc tctccaccct tatcacaaca caagaacacc tctgattact cctgccatca 3840 tgacccttgg ccataatatg atttatctcc acactagcag agaccaaccg aacccccttc 3900 gaccttgccg aaggggagtc cgaactagtc tcaggcttca acatcgaata cgccgcaggc 3960 cccttcgccc tattcttcat agccgaatac acaaacatta ttataataaa caccctcacc 4020 actacaatct tcctaggaac aacatatgac gcactctccc ctgaactcta cacaacatat 4080 tttgtcacca agaccctact tctgacctcc ctgttcttat gaattcgaac agcatacccc 4140 cgattccgct acgaccaact catacacctc ctatgaaaaa acttcctacc actcacccta 4200 gcattactta tatgatatgt ctccataccc actacaatct ccagcattcc ccctcaaacc 4260 taagaaatat gtctgataaa agagttactt tgatagagta aataatagga gtttaaaccc 4320 ccttatttct aggactatga gaatcgaacc catccctgag aatccaaaat tctccgtgcc 4380 acctatcaca ccccatccta aagtaaggtc agctaaataa gctatcgggc ccataccccg 4440 aaaatgttgg ttataccctt cccgtactaa ttaatcccct ggcccaaccc gtcatctact 4500 ctaccatctt tgcaggcaca ctcatcacag cgctaagctc gcactgattt tttacctgag 4560 tcggcctaga aataaacatg ctagctttta ttccagttct aaccaaaaaa ataaaccctc 4620 gttccacaga agctgccatc aagtatttcc tcacgcaagc aaccgcatcc ataatccttc 4680 taatagctat cctcttcaac aatatactct ccggacaatg aaccataacc aatactacca 4740 atcaatactc atcattaata atcataatgg ctatagcaat aaaactagga atagccccct 4800 ttcacttctg agtcccagag gttacccaag gcacccctct gacatccggc ctgcttcttc 4860 tcacatgaca aaaactagcc cccatctcaa tcatatacca aatctctccc tcactaaacg 4920 taagccttct cctcactctc tcaatcttat ccatcatagc aggcagttga ggtggattaa 4980 accaaaccca gctacgcaaa atcttagcat actcctcaat tacccacata ggatgaataa 5040 tagcagttct accgtacaac cctaacataa ccattcttaa tttaactatt tatattatcc 5100 taactactac cgcattccta ctactcaact taaactccag caccacgacc ctactactat 5160 ctcgcacctg aaacaagcta acatgactaa cacccttaat tccatccacc ctcctctccc 5220 taggaggcct gcccccgcta accggctttt tgcccaaatg ggccattatc gaagaattca 5280 caaaaaacaa tagcctcatc atccccacca tcatagccac catcaccctc cttaacctct 5340 acttctacct acgcctaatc tactccacct caatcacact actccccata tctaacaacg 5400 taaaaataaa atgacagttt gaacatacaa aacccacccc actcctcccc acactcatcg 5460 cccttaccac gctactccta cctatctccc cttttatact aataatctta tagaaattta 5520 ggttaaatac agaccaagag ccttcaaagc cctcagtaag ttgcaatact taatttctgt 5580 aacagctaag gactgcaaaa ccccactctg catcaactga acgcaaatca gccactttaa 5640 ttaagctaag cccttactag accaatggga cttaaaccca caaacactta gttaacagct 5700 aagcacccta atcaactggc ttcaatctac ttctcccgcc gccgggaaaa aaggcgggag 5760 aagccccggc aggtttgaag ctgcttcttc gaatttgcaa ttcaatatga aaatcacctc 5820 ggagctggta aaaagaggcc taacccctgt ctttagattt acagtccaat gcttcactca 5880 gccattttac ctcaccccca ctgatgttcg ccgaccgttg actattctct acaaaccaca 5940 aagacattgg aacactatac ctattattcg gcgcatgagc tggagtccta ggcacagctc 6000 taagcctcct tattcgagcc gagctgggcc agccaggcaa ccttctaggt aacgaccaca 6060 tctacaacgt tatcgtcaca gcccatgcat ttgtaataat cttcttcata gtaataccca 6120 tcataatcgg aggctttggc aactgactag ttcccctaat aatcggtgcc cccgatatgg 6180 cgttcccccg cataaacaac ataagcttct gactcttacc tccctctctc ctactcctgc 6240 tcgcatctgc tatagtggag gccggggcag gaacaggttg aacagtctac cctcccttag 6300 cagggaacta ctcccaccct ggagcctccg tagacctaac catcttctcc ttacacctag 6360 caggtgtctc ctctatctta ggggccatca atttcatcac aacaattatc aatataaaac 6420 cccctgccat aacccaatac caaacgcccc tcttcgtctg atccgtccta atcacagcag 6480 tcctacttct cctatctctc ccagtcctag ctgctggcat cactatacta ctaacagacc 6540 gcaacctcaa caccaccttc ttcgaccccg ccggaggagg agaccccatt ctataccaac 6600 acctattctg atttttcggt caccctgaag tttatattct tatcctacca ggcttcggaa 6660 taatctccca tattgtaact tactactccg gaaaaaaaga accatttgga tacataggta 6720 tggtctgagc tatgatatca attggcttcc tagggtttat cgtgtgagca caccatatat 6780 ttacagtagg aatagacgta gacacacgag catacttcac ctccgctacc ataatcatcg 6840 ctatccccac cggcgtcaaa gtatttagct gactcgccac actccacgga agcaatatga 6900 aatgatctgc tgcagtgctc tgagccctag gattcatctt tcttttcacc gtaggtggcc 6960 tgactggcat tgtattagca aactcatcac tagacatcgt actacacgac acgtactacg 7020 ttgtagctca cttccactat gtcctatcaa taggagctgt atttgccatc ataggaggct 7080 tcattcactg atttccccta ttctcaggct acaccctaga ccaaacctac gccaaaatcc 7140 atttcgctat catattcatc ggcgtaaatc taactttctt cccacaacac tttctcggcc 7200 tatccggaat gccccgacgt tactcggact accccgatgc atacaccaca tgaaatatcc 7260 tatcatctgt aggctcattc atttctctaa cagcagtaat attaataatt ttcatgattt 7320 gagaagcctt cgcttcgaag cgaaaagtcc taatagtaga agaaccctcc ataaacctgg 7380 agtgactata tggatgcccc ccaccctacc acacattcga agaacccgta tacataaaat 7440 ctagacaaaa aaggaaggaa tcgaaccccc caaagctggt ttcaagccaa ccccatggcc 7500 tccatgactt tttcaaaaag atattagaaa aaccatttca taactttgtc aaagttaaat 7560 tataggctaa atcctatata tcttaatggc acatgcagcg caagtaggtc tacaagacgc 7620 tacttcccct atcatagaag agcttatcac ctttcatgat cacgccctca taatcatttt 7680 ccttatctgc ttcctagtcc tgtatgccct tttcctaaca ctcacaacaa aactaactaa 7740 tactaacatc tcagacgctc aggaaataga aaccgtctga actatcctgc ccgccatcat 7800 cctagtcctc atcgccctcc catccctacg catcctttac ataacagacg aggtcaacga 7860 tccctccctt accatcaaat caattggcca ccaatggtac tgaacctacg agtacaccga 7920 ctacggcgga ctaatcttca actcctacat acttccccca ttattcctag aaccaggcga 7980 cctgcgactc cttgacgttg acaatcgagt agtactcccg attgaaaccc ccattcgtat 8040 aataattaca tcacaagacg tcttgcactc atgagctgtc cccacattag gcttaaaaac 8100 agatgcaatt ccaggacgtc taaaccaaac cactttcacc gctacacgac caggggtata 8160 ctacggtcaa tgctctgaaa tctgtggagc aaaccacagt ttcatgccca tcgtcctaga 8220 attaattccc ctaaaaatct ttgaaatagg acccgtattt accctatagc accccctcta 8280 ccccctctag agcccactgt aaagctaact tagcattaac cttttaagtt aaagattaag 8340 agaaccaaca cctctttaca gtgaaatgcc ccaactaaat actaccgtat ggcccaccat 8400 aattaccccc atactcctta cactattcct catcacccaa ctaaaaatat taaacacaaa 8460 ctaccactta cctccctcac caaagcccat aaaaataaaa aattataaca aaccctgaga 8520 accaaaatga acgaaaatct gttcgcttca ttcattgccc ccacaatcct aggcctaccc 8580 gccgcagtac tgatcattct atttccccct ctattgatcc ccacctccaa atatctcatc 8640 aacaaccgac taattaccac ccaacaatga ctaatcaaac taacctcaaa acaaatgata 8700 gccatacaca acactaaagg acgaacctga tctcttatac tagtatcctt aatcattttt 8760 attgccacaa ctaacctcct cggactcctg cctcactcat ttacaccaac cacccaacta 8820 tctataaacc tagccatggc catcccctta tgagcgggcg cagtgattat aggctttcgc 8880 tctaagatta aaaatgccct agcccacttc ttaccacaag gcacacctac accccttatc 8940 cccatactag ttattatcga aaccatcagc ctactcattc aaccaatagc cctggccgta 9000 cgcctaaccg ctaacattac tgcaggccac ctactcatgc atctaattgg aagcgccacc 9060 ctagcaatat caaccattaa ccttccctct acacttatca tcttcacaat tctaattcta 9120 ctgactatcc tagaaatcgc tgtcgcctta atccaagcct acgttttcac acttctagta 9180 agcctctacc tgcacgacaa cacataatga cccaccaatc acatgcctat catatagtaa 9240 aacccagccc atgaccccta acaggggccc tctcagccct cctaatgacc tccggcctag 9300 ccatgtgatt tcacttccac tccataacgc tcctcatact aggcctgcta accaacacac 9360 taaccatata ccaatgatgg cgcgatgtaa cacgagaaag cacataccaa ggccaccaca 9420 caccacctgt ccaaaaaggc cttcgatacg ggataatcct atttattacc tcagaagttt 9480 ttttcttcgc aggatttttc tgagcctttt accactccag cctagcccct accccccaac 9540 taggagggca ctggccccca acaggcatca ccccgctaaa tcccctagaa gtcccactcc 9600 taaacacatc cgtattactc gcatcaggag tatcaatcac ctgagctcac catagtctaa 9660 tagaaaacaa ccgaaaccaa ataattcaag cactgcttat tacaatttta ctgggtctct 9720 attttaccct cctacaagcc tcagagtact tcgaatctcc cttcaccatt tccgacggca 9780 tctacggctc aacatttttt gtagccacag gcttccacgg acttcacgtc attattggct 9840 caactttcct cactatctgc ttcatccgcc aactaatatt tcactttaca tccaaacatc 9900 actttggctt cgaagccgcc gcctgatact ggcattttgt agatgtggtt tgactatttc 9960 tgtatgtctc catctattga tgagggtctt actcttttag tataaatagt accgttaact 10020 tccaattaac tagttttgac aacattcaaa aaagagtaat aaacttcgcc ttaattttaa 10080 taatcaacac cctcctagcc ttactactaa taattattac attttgacta ccacaactca 10140 acggctacat agaaaaatcc accccttacg agtgcggctt cgaccctata tcccccgccc 10200 gcgtcccttt ctccataaaa ttcttcttag tagctattac cttcttatta tttgatctag 10260 aaattgccct ccttttaccc ctaccatgag ccctacaaac aactaacctg ccactaatag 10320 ttatgtcatc cctcttatta atcatcatcc tagccctaag tctggcctat gagtgactac 10380 aaaaaggatt agactgaacc gaattggtat atagtttaaa caaaacgaat gatttcgact 10440 cattaaatta tgataatcat atttaccaaa tgcccctcat ttacataaat attatactag 10500 catttaccat ctcacttcta ggaatactag tatatcgctc acacctcata tcctccctac 10560 tatgcctaga aggaataata ctatcgctat tcattatagc tactctcata accctcaaca 10620 cccactccct cttagccaat attgtgccta ttgccatact agtttttgcc gcctgcgaag 10680 cagcggtagg cctagcccta ctagtcgcaa tctccaacac atatggccta gactacgtac 10740 ataacctaaa cctactccaa tgctaaaact aatcgtccca acaattatat tactaccact 10800 gacatgactc tccaaaaaac acataatttg aatcaacaca accacccaca gcctaattat 10860 tagcatcatc cccctactat tttttaacca aatcaacaac aacctattta gctgctcccc 10920 aaccttttcc tccgaccccc taacaacccc cctcctaata ctaactacct gactcctacc 10980 cctcacaatc atggcaagcc aacgccactt atccagtgaa ccactatcac gaaaaaaact 11040 ctacctctct atactaatct ccctacaaat ctccttaatt ataacattca cagccacaga 11100 actaatcata ttttatatct tcttcgaaac cacacttatc cccaccttgg ctatcatcac 11160 ccgatgaggc aaccagccag aacgcctgaa cgcaggcaca tacttcctat tctacaccct 11220 agtaggctcc cttcccctac tcatcgcact aatttacact cacaacaccc taggctcact 11280 aaacattcta ctactcactc tcactgccca agaactatca aactcctgag ccaacaactt 11340 aatatgacta gcttacacaa tagcttttat agtaaagata cctctttacg gactccactt 11400 atgactccct aaagcccatg tcgaagcccc catcgctggg tcaatagtac ttgccgcagt 11460 actcttaaaa ctaggcggct atggtataat acgcctcaca ctcattctca accccctgac 11520 aaaacacata gcctacccct tccttgtact atccctatga ggcataatta taacaagctc 11580 catctgccta cgacaaacag acctaaaatc gctcattgca tactcttcaa tcagccacat 11640 agccctcgta gtaacagcca ttctcatcca aaccccctga agcttcaccg gcgcagtcat 11700 tctcataatc gcccacggac ttacatcctc attactattc tgcctagcaa actcaaacta 11760 cgaacgcact cacagtcgca tcataatcct ctctcaagga cttcaaactc tactcccact 11820 aatagctttt tgatgacttc tagcaagcct cgctaacctc gccttacccc ccactattaa 11880 cctactggga gaactctctg tgctagtaac cacattctcc tgatcaaata tcactctcct 11940 acttacagga ctcaacatac tagtcacagc cctatactcc ctctacatat ttaccacaac 12000 acaatgaggc tcactcaccc accacattaa caacataaaa ccctcattca cacgagaaaa 12060 caccctcatg ttcatacacc tatcccccat tctcctccta tccctcaacc ccgacatcat 12120 caccgggttt tcctcttgta aatatagttt aaccaaaaca tcagattgtg aatctgacaa 12180 cagaggctta cgacccctta tttaccgaga aagctcacaa gaactgctaa ctcatgcccc 12240 catgtctaac aacatggctt tctcaacttt taaaggataa cagctatcca ttggtcttag 12300 gccccaaaaa ttttggtgca actccaaata aaagtaataa ccatgcacac tactataacc 12360 accctaaccc tgacttccct aattcccccc atccttacca ccctcgttaa ccctaacaaa 12420 aaaaactcat acccccatta tgtaaaatcc attgtcgcat ccacctttat tatcagtctc 12480 ttccccacaa caatattcat gtgcctagac caagaagtta ttatctcgaa ctgacactga 12540 gccacaaccc aaacaaccca gctctcccta agcttcaaac tagactactt ctccataata 12600 ttcatccctg tagcattgtt cgttacatgg tccatcatag aattctcact gtgatatata 12660 aactcagacc caaacattaa tcagttcttc aaatatctac tcattttcct aattaccatg 12720 ctaatcttag ttaccgctaa caacctattc caactgttca tcggctgaga gggcgtagga 12780 attatatcct tcttgctcat cagttgatga tacgcccgag cagatgccaa cacagcagcc 12840 attcaagcaa tcctatacaa ccgtatcggc gatatcggtt tcatcctcgc cttagcatga 12900 tttatcctac actccaactc atgagaccca caacaaatag cccttctaaa cgctaatcca 12960 agcctcaccc cactactagg cctcctccta gcagcagcag gcaaatcagc ccaattaggt 13020 ctccacccct gactcccctc agccatagaa ggccccaccc cagtctcagc cctactccac 13080 tcaagcacta tagttgtagc aggagtcttc ttactcatcc gcttccaccc cctagcagaa 13140 aatagcccac taatccaaac tctaacacta tgcttaggcg ctatcaccac tctgttcgca 13200 gcagtctgcg cccttacaca aaatgacatc aaaaaaatcg tagccttctc cacttcaagt 13260 caactaggac tcatagtagt tacaatcggc atcaaccaac cacacctagc attcctgcac 13320 atctgtaccc acgccttctt caaagccata ctatttatgt gctccgggtc catcatccac 13380 aaccttaaca atgaacaaga tattcgaaaa ataggaggac tactcaaaac catacctctc 13440 acttcaacct ccctcaccat tggcagccta gcattagcag gaataccttt cctcacaggt 13500 ttctattcca aagaccacat catcgaaacc gcaaacatat catacacaaa cgcctgagcc 13560 ctatctatta ctctcatcgc tacctccctg acaagcgcct atagcactcg aataattctt 13620 ctcaccctaa caggtcaacc tcgcttccct acccttacta acattaacga aaataacccc 13680 accctactaa accccattaa acgcctggca gccggaagcc tattcgcagg atttctcatt 13740 actaacaaca tttcccccac atcccccttc caaacaacaa tccccctcta cctaaaactc 13800 acagccctcg ctgtcacttt cctaggactt ctaacagccc tagacctcaa ctacctaacc 13860 aacaaactta aaataaaatc cccactatgc acattttatt tctccaacat actcggattc 13920 taccctagca tcacacaccg cacaatcccc tatctaggcc ttcttacgag ccaaaacctg 13980 cccctactcc tcctagacct aacctgacta gaaaagctat tacctaaaac aatttcacag 14040 caccaaatct ccacctccat catcacctca acccaaaaag gcataattaa actttacttc 14100 ctctctttct tcttcccact catcctaacc ctactcctaa tcacataacc tattcccccg 14160 agcaatctca attacaatat atacaccaac aaacaatgtt caaccagtaa ctactactaa 14220 tcaacgccca taatcataca aagcccccgc accaatagga tcctcccgaa tcaaccctga 14280 cccctctcct tcataaatta ttcagcttcc tacactatta aagtttacca caaccaccac 14340 cccatcatac tctttcaccc acagcaccaa tcctacctcc atcgctaacc ccactaaaac 14400 actcaccaag acctcaaccc ctgaccccca tgcctcagga tactcctcaa tagccatcgc 14460 tgtagtatat ccaaagacaa ccatcattcc ccctaaataa attaaaaaaa ctattaaacc 14520 catataacct cccccaaaat tcagaataat aacacacccg accacaccgc taacaatcaa 14580 tactaaaccc ccataaatag gagaaggctt agaagaaaac cccacaaacc ccattactaa 14640 acccacactc aacagaaaca aagcatacat cattattctc gcacggacta caaccacgac 14700 caatgatatg aaaaaccatc gttgtatttc aactacaaga acaccaatga ccccaatacg 14760 caaaattaac cccctaataa aattaattaa ccactcattc atcgacctcc ccaccccatc 14820 caacatctcc gcatgatgaa acttcggctc actccttggc gcctgcctga tcctccaaat 14880 caccacagga ctattcctag ccatgcacta ctcaccagac gcctcaaccg ccttttcatc 14940 aatcgcccac atcactcgag acgtaaatta tggctgaatc atccgctacc ttcacgccaa 15000 tggcgcctca atattcttta tctgcctctt cctacacatc gggcgaggcc tatattacgg 15060 atcatttctc tactcagaaa cctgaaacat cggcattatc ctcctgcttg caactatagc 15120 aacagccttc ataggctatg tcctcccgtg aggccaaata tcattctgag gggccacagt 15180 aattacaaac ttactatccg ccatcccata cattggaaca gacctagttc aatgaatctg 15240 aggaggctac tcagtagaca gtcccaccct cacacgattc tttacctttc acttcatctt 15300 gcccttcatt attacagccc tagcagcact ccacctccta ttcttgcacg aaacgggatc 15360 aaacaacccc ctaggaatca cctcccattc cgataaaatc accttccacc cttactacac 15420 aatcaaagac gccctcggct tacttctctt ccttctctcc ttaataacat taacactact 15480 ctcaccagac ctcctaggcg acccagacaa ttatacccta gccaacccct taaacacccc 15540 tccccacatc aagcccgaat gatatttcct attcgcctac acaattctcc gatccgtccc 15600 taacaaacta ggaggcgtcc ttgccctatt actatccatc ctcatcctag caataatccc 15660 catcctccat atatccaaac aacaaagcat aatatttcgc ccactaagcc aatcacttta 15720 ttgactccta gccgcagacc tcctcattct aacctgaatc ggaggacaac cagtaagcta 15780 cccttttacc atcattggac aagtagcatc cgtactatac ttcacaacaa tcctaatcct 15840 aataccaact atctccctaa ttgaaaacaa aatactcaaa tgggcctgtc cttgtagtat 15900 aaactaatac accagtcttg taaaccggaa atgaaaacct ctttccaagg acaaatcaga 15960 gaaaaagtct ttaactccac cattagcacc caaagctaag attctaattt aaactattct 16020 ctgttctttc atggggaagc agatttgggt accacccaag tattgactca cccatcaaca 16080 accgctatgt atttcgtaca ttactgccag ccaccatgaa tattgtacag taccataaat 16140 acttgaccac ctgtagtaca taaaaaccca atccacatta aaaccctccc cccatgctta 16200 caagcaagta cagcaatcaa ccttcaactg tcacacatca accgcaactc caaagccacc 16260 cctcacccac taggatacca acaaacctac ccacccttaa cagtacatag cacataaagc 16320 catttaccgt acatagcaca ttacagtcaa atcccttctc gtccccatgg atgacccccc 16380 tcagataggg gtcccttgac caccatcctc cgtgaaatca atatcccgca caagagtgct 16440 actctcctcg ctccgggccc ataacacttg ggggtagcta aagtgaactg tatccgacat 16500 ctggttccta cttcagggcc ataaagccta aatagcccac acgttcccct taaataagac 16560 atcacgatg 16569 // ID KC345789; SV 1; circular; genomic DNA; STD; HUM; 16569 BP. XX AC KC345789; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT6_181 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16569 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16569 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; 11e7852c3a813609191b89c019da1066. DR Ensembl-Gn; ENSG00000198840; homo_sapiens. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Tr; ENST00000361227; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16569 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT6_181" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="||Ani" FT /db_xref="taxon:9606" FT /haplogroup="L0d1" FT D-loop complement(join(16024..16569,1..576)) FT tRNA 577..647 FT /product="tRNA-Phe" FT rRNA 648..1601 FT /product="12S ribosomal RNA" FT tRNA 1602..1670 FT /product="tRNA-Val" FT rRNA 1671..3229 FT /product="16S ribosomal RNA" FT tRNA 3230..3304 FT /product="tRNA-Leu" FT gene 3307..4262 FT /gene="ND1" FT CDS 3307..4262 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4261..4262,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q4GRH9" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:Q4GRH9" FT /protein_id="AGD82212.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPTTISSIPPQT" FT tRNA 4263..4331 FT /product="tRNA-Ile" FT tRNA complement(4329..4400) FT /product="tRNA-Gln" FT tRNA 4402..4469 FT /product="tRNA-Met" FT gene 4470..5511 FT /gene="ND2" FT CDS 4470..5511 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5511,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82213.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5512..5576 FT /product="tRNA-Trp" FT tRNA complement(5587..5655) FT /product="tRNA-Ala" FT tRNA complement(5657..5729) FT /product="tRNA-Asn" FT tRNA complement(5761..5826) FT /product="tRNA-Cys" FT tRNA complement(5826..5891) FT /product="tRNA-Tyr" FT gene 5904..7445 FT /gene="COX1" FT CDS 5904..7445 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B1J9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B1J9" FT /protein_id="AGD82214.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7445..7516) FT /product="tRNA-Ser" FT tRNA 7518..7585 FT /product="tRNA-Asp" FT gene 7586..8269 FT /gene="COX2" FT CDS 7586..8269 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /db_xref="GOA:Q9B1F9" FT /db_xref="InterPro:IPR001505" FT /db_xref="InterPro:IPR002429" FT /db_xref="InterPro:IPR008972" FT /db_xref="InterPro:IPR011759" FT /db_xref="InterPro:IPR014222" FT /db_xref="InterPro:IPR034210" FT /db_xref="InterPro:IPR036257" FT /db_xref="UniProtKB/TrEMBL:Q9B1F9" FT /protein_id="AGD82215.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIETPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8295..8364 FT /product="tRNA-Lys" FT gene 8366..8572 FT /gene="ATP8" FT CDS 8366..8572 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82216.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8527..9207 FT /gene="ATP6" FT CDS 8527..9207 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B185" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B185" FT /protein_id="AGD82217.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9207..9990 FT /gene="COX3" FT CDS 9207..9990 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9990,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82218.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9991..10058 FT /product="tRNA-Gly" FT gene 10059..10404 FT /gene="ND3" FT CDS 10059..10404 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10404,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXZ5" FT /db_xref="InterPro:IPR000440" FT /db_xref="InterPro:IPR038430" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ5" FT /protein_id="AGD82219.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWTE" FT tRNA 10405..10469 FT /product="tRNA-Arg" FT gene 10470..10766 FT /gene="ND4L" FT CDS 10470..10766 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:E2FR42" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:E2FR42" FT /protein_id="AGD82220.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVAISNTYGLDYVHNLNLLQC" FT gene 10760..12137 FT /gene="ND4" FT CDS 10760..12137 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12137,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82221.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12138..12206 FT /product="tRNA-His" FT tRNA 12207..12265 FT /product="tRNA-Ser" FT tRNA 12266..12336 FT /product="tRNA-Leu" FT gene 12337..14148 FT /gene="ND5" FT CDS 12337..14148 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q4F0F4" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q4F0F4" FT /protein_id="AGD82222.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPTSPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14149..14673) FT /gene="ND6" FT CDS complement(14149..14673) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82223.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14674..14742) FT /product="tRNA-Glu" FT gene 14747..15887 FT /gene="CYTB" FT CDS 14747..15887 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15887,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q15H14" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q15H14" FT /protein_id="AGD82224.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIITALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLLSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15888..15953 FT /product="tRNA-Thr" FT tRNA complement(15955..16023) FT /product="tRNA-Pro" XX SQ Sequence 16569 BP; 5132 A; 5185 C; 2163 G; 4088 T; 1 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcggac atacctacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tattttcccc tcccactccc atactactaa 480 tctcatcaat acaaccccgc ccatcctacc cagcacacac acaccgctgc taaccccata 540 ccccgaacca accaaacccc aaagacnccc cccacagttt atgtagctta cctcctcaaa 600 gcaatacact gaaaatgttt agacgggctc acatcacccc ataaacaaat aggtttggtc 660 ctagcctttc tattagctct tagtaagatt acacatgcaa gcatccccgt tccagtgaat 720 tcaccctcta aatcaccacg atcaaaaggg acaagcatca agcacgcaac aatgcagctc 780 aaaacgctta gcctagccac acccccacgg gaaacagcag tgataaacct ttagcaataa 840 acgaaagttt aactaagcta tactaacccc agggttggtc aatttcgtgc cagccaccgc 900 ggtcacacga ttaacccaag tcaatagaag ccggcgtaaa gagtgtttta gatcaccccc 960 tccccaataa agctaaaact cacctgagtt gtaaaaaact ccagttgaca caaaataaac 1020 tacgaaagtg gctttaacat atctgaatac acaatagcta agacccaaac tgggattaga 1080 taccccacta tgcttagccc taaacctcaa cagttaaatc aacaaaactg ctcgccagaa 1140 cactacgagc cacagcttaa aactcaaagg acctggcggt gcttcatatc cctctagagg 1200 agcctgttct gtaatcgata aaccccgatc aacctcacca cctcttgctc agcctatata 1260 ccgccatctt cagcaaaccc tgatgaaggc tacaaagtaa gcgcaagtac ccacgtaaag 1320 acgttaggtc aaggtgtagc ccatgaggtg gcaagaaatg ggctacattt tctaccccag 1380 aaaactacga tagcccttat gaaacttaag ggtcgaaggt ggatttagca gtaaactaag 1440 agtagagtgc ttagttgaac agggccctga agcgcgtaca caccgcccgt caccctcctc 1500 aagtatactt caaaggacat ttaactaaaa cccctacgca tttatataga ggagacaagt 1560 cgtaacatgg taagtgtact ggaaagtgca cttggacgaa ccagagtgta gcttaacaca 1620 aagcacccaa cttacactta ggagatttca acttaacttg accgctctga gctaaaccta 1680 gccccaaacc cactccacct tactaccaga caaccttagc caaaccattt acccaaataa 1740 agtataggcg atagaaattg aaacctggcg caatagatat agtaccgcaa gggaaagatg 1800 aaaaattata accaagcata atatagcaag gactaacccc tataccttct gcataatgaa 1860 ttaactagaa ataactttgc aaggagagcc aaagctaaga cccccgaaac cagacgagct 1920 acctaagaac agctaaaaga gcacacccgt ctatgtagca aaatagtggg aagatttata 1980 ggtagaggcg acaaacctac cgagcctggt gatagctggt tgtccaagat agaatcttag 2040 ttcaacttta aatttgccca cagaaccctc taaatcccct tgtaaattta actgttagtc 2100 caaagaggaa cagctctttg gacactagga aaaaaccttg tagagagagt aaaaaattta 2160 acacccatag taggcctaaa agcagccacc aattaagaaa gcgttcaagc tcaacaccca 2220 ctacctaaaa aatcccaaac atataactga actcctcaca cccaattgga ccaatctatc 2280 accctataga agaactaatg ttagtataag taacatgaaa acattctcct ccgcataagc 2340 ctgcgtcaga ttaaaacact gaactgacaa ttaacagccc aatatctaca atcaaccaac 2400 aagtcattat taccctcact gtcaacccaa cacaggcatg ctcataagga aaggttaaaa 2460 aaagtaaaag gaactcggca aatccttacc ccgcctgttt accaaaaaca tcacctctag 2520 catcaccagt attagaggca ccgcctgccc agtgacacat gtttaacggc cgcggtaccc 2580 taaccgtgca aaggtagcat aatcacttgt tccttaaata gggacctgta tgaatggctc 2640 cacgagggtt cagctgtctc ttacttttaa ccagtgaaat tgacctgccc gtgaagaggc 2700 gggcataaca cagcaagacg agaagaccct atggagcttt aatttattaa tgcaaacaat 2760 acctaacaaa cccacaggtc ctaaactacc aaacctgcat taaaaatttc ggttggggcg 2820 acctcggagc agaacccaac ctccgagcag tacatgctaa gacttcacca gtcaaagcga 2880 actaccatac tcaattgatc caataacttg accaacggaa caagttaccc tagggataac 2940 agcgcaatcc tattctagag tccatatcaa caatagggtt tacgacctcg atgttggatc 3000 aggacatccc gatggtgcag ccgctattaa aggttcgttt gttcaacgat taaagtccta 3060 cgtgatctga gttcagaccg gagtaatcca ggtcggtttc tatctacttc aaattcctcc 3120 ctgtacgaaa ggacaagaga aataaggcct acttcacaaa gcgccttccc ccgtaaatga 3180 tatcatctca acttagtatt atacccacac ccacccaaga acagggtttg ttaagatggc 3240 agagcccggt aatcgcataa aacttaaaac tttacagtca gaggttcaat tcctcttctt 3300 aacaacatac ccatggccaa cctcctactc ctcattgtac ccattctaat cgcaatggca 3360 ttcctaatgc ttaccgaacg aaaaattcta ggctatatac aactacgcaa aggccccaac 3420 gttgtaggcc cctacggact actacaaccc ttcgctgacg ccataaaact cttcaccaaa 3480 gagcccctaa aacccgccac atctaccatc accctataca tcaccgcccc aaccttagct 3540 ctcaccatcg ctcttctact atgaaccccc ctccccatac ccaaccccct ggttaacctc 3600 aacctaggcc tcctattcat tctagccacc tctagcctag ccgtttactc aatcctctga 3660 tcagggtgag catcaaactc aaactacgcc ctgatcggcg cactgcgagc agtagcccaa 3720 acaatctcat atgaagtcac cctagccatc attctgctat caacattact aataagtggc 3780 tcctttaacc tctccaccct tatcacaaca caagaacacc tctgattact cctgccatca 3840 tgacccttgg ccataatatg atttatctcc acactagcag agaccaaccg aacccccttc 3900 gaccttgccg aaggggagtc cgaactagtc tcaggcttca acatcgaata cgccgcaggc 3960 cccttcgccc tattcttcat agccgaatac acaaacatta ttataataaa caccctcacc 4020 actacaatct tcctaggaac aacatatgac gcactctccc ctgaactcta cacaacatat 4080 tttgtcacca agaccctact tctgacctcc ctgttcttat gaattcgaac agcatacccc 4140 cgattccgct acgaccaact catacacctc ctatgaaaaa acttcctacc actcacccta 4200 gcattactta tatgatatgt ctccataccc actacaatct ccagcattcc ccctcaaacc 4260 taagaaatat gtctgataaa agagttactt tgatagagta aataatagga gtttaaaccc 4320 ccttatttct aggactatga gaatcgaacc catccctgag aatccaaaat tctccgtgcc 4380 acctatcaca ccccatccta aagtaaggtc agctaaataa gctatcgggc ccataccccg 4440 aaaatgttgg ttataccctt cccgtactaa ttaatcccct ggcccaaccc gtcatctact 4500 ctaccatctt tgcaggcaca ctcatcacag cgctaagctc gcactgattt tttacctgag 4560 tcggcctaga aataaacatg ctagctttta ttccagttct aaccaaaaaa ataaaccctc 4620 gttccacaga agctgccatc aagtatttcc tcacgcaagc aaccgcatcc ataatccttc 4680 taatagctat cctcttcaac aatatactct ccggacaatg aaccataacc aatactacca 4740 atcaatactc atcattaata atcataatgg ctatagcaat aaaactagga atagccccct 4800 ttcacttctg agtcccagag gttacccaag gcacccctct gacatccggc ctgcttcttc 4860 tcacatgaca aaaactagcc cccatctcaa tcatatacca aatctctccc tcactaaacg 4920 taagccttct cctcactctc tcaatcttat ccatcatagc aggcagttga ggtggattaa 4980 accaaaccca gctacgcaaa atcttagcat actcctcaat tacccacata ggatgaataa 5040 tagcagttct accgtacaac cctaacataa ccattcttaa tttaactatt tatattatcc 5100 taactactac cgcattccta ctactcaact taaactccag caccacgacc ctactactat 5160 ctcgcacctg aaacaagcta acatgactaa cacccttaat tccatccacc ctcctctccc 5220 taggaggcct gcccccgcta accggctttt tgcccaaatg ggccattatc gaagaattca 5280 caaaaaacaa tagcctcatc atccccacca tcatagccac catcaccctc cttaacctct 5340 acttctacct acgcctaatc tactccacct caatcacact actccccata tctaacaacg 5400 taaaaataaa atgacagttt gaacatacaa aacccacccc actcctcccc acactcatcg 5460 cccttaccac gctactccta cctatctccc cttttatact aataatctta tagaaattta 5520 ggttaaatac agaccaagag ccttcaaagc cctcagtaag ttgcaatact taatttctgt 5580 aacagctaag gactgcaaaa ccccactctg catcaactga acgcaaatca gccactttaa 5640 ttaagctaag cccttactag accaatggga cttaaaccca caaacactta gttaacagct 5700 aagcacccta atcaactggc ttcaatctac ttctcccgcc gccgggaaaa aaggcgggag 5760 aagccccggc aggtttgaag ctgcttcttc gaatttgcaa ttcaatatga aaatcacctc 5820 ggagctggta aaaagaggcc taacccctgt ctttagattt acagtccaat gcttcactca 5880 gccattttac ctcaccccca ctgatgttcg ccgaccgttg actattctct acaaaccaca 5940 aagacattgg aacactatac ctattattcg gcgcatgagc tggagtccta ggcacagctc 6000 taagcctcct tattcgagcc gagctgggcc agccaggcaa ccttctaggt aacgaccaca 6060 tctacaacgt tatcgtcaca gcccatgcat ttgtaataat cttcttcata gtaataccca 6120 tcataatcgg aggctttggc aactgactag ttcccctaat aatcggtgcc cccgatatgg 6180 cgttcccccg cataaacaac ataagcttct gactcttacc tccctctctc ctactcctgc 6240 tcgcatctgc tatagtggag gccggggcag gaacaggttg aacagtctac cctcccttag 6300 cagggaacta ctcccaccct ggagcctccg tagacctaac catcttctcc ttacacctag 6360 caggtgtctc ctctatctta ggggccatca atttcatcac aacaattatc aatataaaac 6420 cccctgccat aacccaatac caaacgcccc tcttcgtctg atccgtccta atcacagcag 6480 tcctacttct cctatctctc ccagtcctag ctgctggcat cactatacta ctaacagacc 6540 gcaacctcaa caccaccttc ttcgaccccg ccggaggagg agaccccatt ctataccaac 6600 acctattctg atttttcggt caccctgaag tttatattct tatcctacca ggcttcggaa 6660 taatctccca tattgtaact tactactccg gaaaaaaaga accatttgga tacataggta 6720 tggtctgagc tatgatatca attggcttcc tagggtttat cgtgtgagca caccatatat 6780 ttacagtagg aatagacgta gacacacgag catacttcac ctccgctacc ataatcatcg 6840 ctatccccac cggcgtcaaa gtatttagct gactcgccac actccacgga agcaatatga 6900 aatgatctgc tgcagtgctc tgagccctag gattcatctt tcttttcacc gtaggtggcc 6960 tgactggcat tgtattagca aactcatcac tagacatcgt actacacgac acgtactacg 7020 ttgtagctca cttccactat gtcctatcaa taggagctgt atttgccatc ataggaggct 7080 tcattcactg atttccccta ttctcaggct acaccctaga ccaaacctac gccaaaatcc 7140 atttcgctat catattcatc ggcgtaaatc taactttctt cccacaacac tttctcggcc 7200 tatccggaat gccccgacgt tactcggact accccgatgc atacaccaca tgaaatatcc 7260 tatcatctgt aggctcattc atttctctaa cagcagtaat attaataatt ttcatgattt 7320 gagaagcctt cgcttcgaag cgaaaagtcc taatagtaga agaaccctcc ataaacctgg 7380 agtgactata tggatgcccc ccaccctacc acacattcga agaacccgta tacataaaat 7440 ctagacaaaa aaggaaggaa tcgaaccccc caaagctggt ttcaagccaa ccccatggcc 7500 tccatgactt tttcaaaaag atattagaaa aaccatttca taactttgtc aaagttaaat 7560 tataggctaa atcctatata tcttaatggc acatgcagcg caagtaggtc tacaagacgc 7620 tacttcccct atcatagaag agcttatcac ctttcatgat cacgccctca taatcatttt 7680 ccttatctgc ttcctagtcc tgtatgccct tttcctaaca ctcacaacaa aactaactaa 7740 tactaacatc tcagacgctc aggaaataga aaccgtctga actatcctgc ccgccatcat 7800 cctagtcctc atcgccctcc catccctacg catcctttac ataacagacg aggtcaacga 7860 tccctccctt accatcaaat caattggcca ccaatggtac tgaacctacg agtacaccga 7920 ctacggcgga ctaatcttca actcctacat acttccccca ttattcctag aaccaggcga 7980 cctgcgactc cttgacgttg acaatcgagt agtactcccg attgaaaccc ccattcgtat 8040 aataattaca tcacaagacg tcttgcactc atgagctgtc cccacattag gcttaaaaac 8100 agatgcaatt ccaggacgtc taaaccaaac cactttcacc gctacacgac caggggtata 8160 ctacggtcaa tgctctgaaa tctgtggagc aaaccacagt ttcatgccca tcgtcctaga 8220 attaattccc ctaaaaatct ttgaaatagg acccgtattt accctatagc accccctcta 8280 ccccctctag agcccactgt aaagctaact tagcattaac cttttaagtt aaagattaag 8340 agaaccaaca cctctttaca gtgaaatgcc ccaactaaat actaccgtat ggcccaccat 8400 aattaccccc atactcctta cactattcct catcacccaa ctaaaaatat taaacacaaa 8460 ctaccactta cctccctcac caaagcccat aaaaataaaa aattataaca aaccctgaga 8520 accaaaatga acgaaaatct gttcgcttca ttcattgccc ccacaatcct aggcctaccc 8580 gccgcagtac tgatcattct atttccccct ctattgatcc ccacctccaa atatctcatc 8640 aacaaccgac taattaccac ccaacaatga ctaatcaaac taacctcaaa acaaatgata 8700 gccatacaca acactaaagg acgaacctga tctcttatac tagtatcctt aatcattttt 8760 attgccacaa ctaacctcct cggactcctg cctcactcat ttacaccaac cacccaacta 8820 tctataaacc tagccatggc catcccctta tgagcgggcg cagtgattat aggctttcgc 8880 tctaagatta aaaatgccct agcccacttc ttaccacaag gcacacctac accccttatc 8940 cccatactag ttattatcga aaccatcagc ctactcattc aaccaatagc cctggccgta 9000 cgcctaaccg ctaacattac tgcaggccac ctactcatgc atctaattgg aagcgccacc 9060 ctagcaatat caaccattaa ccttccctct acacttatca tcttcacaat tctaattcta 9120 ctgactatcc tagaaatcgc tgtcgcctta atccaagcct acgttttcac acttctagta 9180 agcctctacc tgcacgacaa cacataatga cccaccaatc acatgcctat catatagtaa 9240 aacccagccc atgaccccta acaggggccc tctcagccct cctaatgacc tccggcctag 9300 ccatgtgatt tcacttccac tccataacgc tcctcatact aggcctgcta accaacacac 9360 taaccatata ccaatgatgg cgcgatgtaa cacgagaaag cacataccaa ggccaccaca 9420 caccacctgt ccaaaaaggc cttcgatacg ggataatcct atttattacc tcagaagttt 9480 ttttcttcgc aggatttttc tgagcctttt accactccag cctagcccct accccccaac 9540 taggagggca ctggccccca acaggcatca ccccgctaaa tcccctagaa gtcccactcc 9600 taaacacatc cgtattactc gcatcaggag tatcaatcac ctgagctcac catagtctaa 9660 tagaaaacaa ccgaaaccaa ataattcaag cactgcttat tacaatttta ctgggtctct 9720 attttaccct cctacaagcc tcagagtact tcgaatctcc cttcaccatt tccgacggca 9780 tctacggctc aacatttttt gtagccacag gcttccacgg acttcacgtc attattggct 9840 caactttcct cactatctgc ttcatccgcc aactaatatt tcactttaca tccaaacatc 9900 actttggctt cgaagccgcc gcctgatact ggcattttgt agatgtggtt tgactatttc 9960 tgtatgtctc catctattga tgagggtctt actcttttag tataaatagt accgttaact 10020 tccaattaac tagttttgac aacattcaaa aaagagtaat aaacttcgcc ttaattttaa 10080 taatcaacac cctcctagcc ttactactaa taattattac attttgacta ccacaactca 10140 acggctacat agaaaaatcc accccttacg agtgcggctt cgaccctata tcccccgccc 10200 gcgtcccttt ctccataaaa ttcttcttag tagctattac cttcttatta tttgatctag 10260 aaattgccct ccttttaccc ctaccatgag ccctacaaac aactaacctg ccactaatag 10320 ttatgtcatc cctcttatta atcatcatcc tagccctaag tctggcctat gagtgactac 10380 aaaaaggatt agactgaacc gaattggtat atagtttaaa caaaacgaat gatttcgact 10440 cattaaatta tgataatcat atttaccaaa tgcccctcat ttacataaat attatactag 10500 catttaccat ctcacttcta ggaatactag tatatcgctc acacctcata tcctccctac 10560 tatgcctaga aggaataata ctatcgctat tcattatagc tactctcata accctcaaca 10620 cccactccct cttagccaat attgtgccta ttgccatact agtttttgcc gcctgcgaag 10680 cagcggtagg cctagcccta ctagtcgcaa tctccaacac atatggccta gactacgtac 10740 ataacctaaa cctactccaa tgctaaaact aatcgtccca acaattatat tactaccact 10800 gacatgactc tccaaaaaac acataatttg aatcaacaca accacccaca gcctaattat 10860 tagcatcatc cccctactat tttttaacca aatcaacaac aacctattta gctgctcccc 10920 aaccttttcc tccgaccccc taacaacccc cctcctaata ctaactacct gactcctacc 10980 cctcacaatc atggcaagcc aacgccactt atccagtgaa ccactatcac gaaaaaaact 11040 ctacctctct atactaatct ccctacaaat ctccttaatt ataacattca cagccacaga 11100 actaatcata ttttatatct tcttcgaaac cacacttatc cccaccttgg ctatcatcac 11160 ccgatgaggc aaccagccag aacgcctgaa cgcaggcaca tacttcctat tctacaccct 11220 agtaggctcc cttcccctac tcatcgcact aatttacact cacaacaccc taggctcact 11280 aaacattcta ctactcactc tcactgccca agaactatca aactcctgag ccaacaactt 11340 aatatgacta gcttacacaa tagcttttat agtaaagata cctctttacg gactccactt 11400 atgactccct aaagcccatg tcgaagcccc catcgctggg tcaatagtac ttgccgcagt 11460 actcttaaaa ctaggcggct atggtataat acgcctcaca ctcattctca accccctgac 11520 aaaacacata gcctacccct tccttgtact atccctatga ggcataatta taacaagctc 11580 catctgccta cgacaaacag acctaaaatc gctcattgca tactcttcaa tcagccacat 11640 agccctcgta gtaacagcca ttctcatcca aaccccctga agcttcaccg gcgcagtcat 11700 tctcataatc gcccacggac ttacatcctc attactattc tgcctagcaa actcaaacta 11760 cgaacgcact cacagtcgca tcataatcct ctctcaagga cttcaaactc tactcccact 11820 aatagctttt tgatgacttc tagcaagcct cgctaacctc gccttacccc ccactattaa 11880 cctactggga gaactctctg tgctagtaac cacattctcc tgatcaaata tcactctcct 11940 acttacagga ctcaacatac tagtcacagc cctatactcc ctctacatat ttaccacaac 12000 acaatgaggc tcactcaccc accacattaa caacataaaa ccctcattca cacgagaaaa 12060 caccctcatg ttcatacacc tatcccccat tctcctccta tccctcaacc ccgacatcat 12120 caccgggttt tcctcttgta aatatagttt aaccaaaaca tcagattgtg aatctgacaa 12180 cagaggctta cgacccctta tttaccgaga aagctcacaa gaactgctaa ctcatgcccc 12240 catgtctaac aacatggctt tctcaacttt taaaggataa cagctatcca ttggtcttag 12300 gccccaaaaa ttttggtgca actccaaata aaagtaataa ccatgcacac tactataacc 12360 accctaaccc tgacttccct aattcccccc atccttacca ccctcgttaa ccctaacaaa 12420 aaaaactcat acccccatta tgtaaaatcc attgtcgcat ccacctttat tatcagtctc 12480 ttccccacaa caatattcat gtgcctagac caagaagtta ttatctcgaa ctgacactga 12540 gccacaaccc aaacaaccca gctctcccta agcttcaaac tagactactt ctccataata 12600 ttcatccctg tagcattgtt cgttacatgg tccatcatag aattctcact gtgatatata 12660 aactcagacc caaacattaa tcagttcttc aaatatctac tcattttcct aattaccatg 12720 ctaatcttag ttaccgctaa caacctattc caactgttca tcggctgaga gggcgtagga 12780 attatatcct tcttgctcat cagttgatga tacgcccgag cagatgccaa cacagcagcc 12840 attcaagcaa tcctatacaa ccgtatcggc gatatcggtt tcatcctcgc cttagcatga 12900 tttatcctac actccaactc atgagaccca caacaaatag cccttctaaa cgctaatcca 12960 agcctcaccc cactactagg cctcctccta gcagcagcag gcaaatcagc ccaattaggt 13020 ctccacccct gactcccctc agccatagaa ggccccaccc cagtctcagc cctactccac 13080 tcaagcacta tagttgtagc aggagtcttc ttactcatcc gcttccaccc cctagcagaa 13140 aatagcccac taatccaaac tctaacacta tgcttaggcg ctatcaccac tctgttcgca 13200 gcagtctgcg cccttacaca aaatgacatc aaaaaaatcg tagccttctc cacttcaagt 13260 caactaggac tcatagtagt tacaatcggc atcaaccaac cacacctagc attcctgcac 13320 atctgtaccc acgccttctt caaagccata ctatttatgt gctccgggtc catcatccac 13380 aaccttaaca atgaacaaga tattcgaaaa ataggaggac tactcaaaac catacctctc 13440 acttcaacct ccctcaccat tggcagccta gcattagcag gaataccttt cctcacaggt 13500 ttctattcca aagaccacat catcgaaacc gcaaacatat catacacaaa cgcctgagcc 13560 ctatctatta ctctcatcgc tacctccctg acaagcgcct atagcactcg aataattctt 13620 ctcaccctaa caggtcaacc tcgcttccct acccttacta acattaacga aaataacccc 13680 accctactaa accccattaa acgcctggca gccggaagcc tattcgcagg atttctcatt 13740 actaacaaca tttcccccac atcccccttc caaacaacaa tccccctcta cctaaaactc 13800 acagccctcg ctgtcacttt cctaggactt ctaacagccc tagacctcaa ctacctaacc 13860 aacaaactta aaataaaatc cccactatgc acattttatt tctccaacat actcggattc 13920 taccctagca tcacacaccg cacaatcccc tatctaggcc ttcttacgag ccaaaacctg 13980 cccctactcc tcctagacct aacctgacta gaaaagctat tacctaaaac aatttcacag 14040 caccaaatct ccacctccat catcacctca acccaaaaag gcataattaa actttacttc 14100 ctctctttct tcttcccact catcctaacc ctactcctaa tcacataacc tattcccccg 14160 agcaatctca attacaatat atacaccaac aaacaatgtt caaccagtaa ctactactaa 14220 tcaacgccca taatcataca aagcccccgc accaatagga tcctcccgaa tcaaccctga 14280 cccctctcct tcataaatta ttcagcttcc tacactatta aagtttacca caaccaccac 14340 cccatcatac tctttcaccc acagcaccaa tcctacctcc atcgctaacc ccactaaaac 14400 actcaccaag acctcaaccc ctgaccccca tgcctcagga tactcctcaa tagccatcgc 14460 tgtagtatat ccaaagacaa ccatcattcc ccctaaataa attaaaaaaa ctattaaacc 14520 catataacct cccccaaaat tcagaataat aacacacccg accacaccgc taacaatcaa 14580 tactaaaccc ccataaatag gagaaggctt agaagaaaac cccacaaacc ccattactaa 14640 acccacactc aacagaaaca aagcatacat cattattctc gcacggacta caaccacgac 14700 caatgatatg aaaaaccatc gttgtatttc aactacaaga acaccaatga ccccaatacg 14760 caaaattaac cccctaataa aattaattaa ccactcattc atcgacctcc ccaccccatc 14820 caacatctcc gcatgatgaa acttcggctc actccttggc gcctgcctga tcctccaaat 14880 caccacagga ctattcctag ccatgcacta ctcaccagac gcctcaaccg ccttttcatc 14940 aatcgcccac atcactcgag acgtaaatta tggctgaatc atccgctacc ttcacgccaa 15000 tggcgcctca atattcttta tctgcctctt cctacacatc gggcgaggcc tatattacgg 15060 atcatttctc tactcagaaa cctgaaacat cggcattatc ctcctgcttg caactatagc 15120 aacagccttc ataggctatg tcctcccgtg aggccaaata tcattctgag gggccacagt 15180 aattacaaac ttactatccg ccatcccata cattggaaca gacctagttc aatgaatctg 15240 aggaggctac tcagtagaca gtcccaccct cacacgattc tttacctttc acttcatctt 15300 gcccttcatt attacagccc tagcagcact ccacctccta ttcttgcacg aaacgggatc 15360 aaacaacccc ctaggaatca cctcccattc cgataaaatc accttccacc cttactacac 15420 aatcaaagac gccctcggct tacttctctt ccttctctcc ttaataacat taacactact 15480 ctcaccagac ctcctaggcg acccagacaa ttatacccta gccaacccct taaacacccc 15540 tccccacatc aagcccgaat gatatttcct attcgcctac acaattctcc gatccgtccc 15600 taacaaacta ggaggcgtcc ttgccctatt actatccatc ctcatcctag caataatccc 15660 catcctccat atatccaaac aacaaagcat aatatttcgc ccactaagcc aatcacttta 15720 ttgactccta gccgcagacc tcctcattct aacctgaatc ggaggacaac cagtaagcta 15780 cccttttacc atcattggac aagtagcatc cgtactatac ttcacaacaa tcctaatcct 15840 aataccaact atctccctaa ttgaaaacaa aatactcaaa tgggcctgtc cttgtagtat 15900 aaactaatac accagtcttg taaaccggaa atgaaaacct ctttccaagg acaaatcaga 15960 gaaaaagtct ttaactccac cattagcacc caaagctaag attctaattt aaactattct 16020 ctgttctttc atggggaagc agatttgggt accacccaag tattgactca cccatcaaca 16080 accgctatgt atttcgtaca ttactgccag ccaccatgaa tattgtacag taccataaat 16140 acttgaccac ctgtagtaca taaaaaccca atccacatta aaaccctccc cccatgctta 16200 caagcaagta cagcaatcaa ccttcaactg tcacacatca accgcaactc caaagccacc 16260 cctcacccac taggatacca acaaacctac ccacccttaa cagtacatag cacataaagc 16320 catttaccgt acatagcaca ttacagtcaa atcccttctc gtccccatgg atgacccccc 16380 tcagataggg gtcccttgac caccatcctc cgtgaaatca atatcccgca caagagtgct 16440 actctcctcg ctccgggccc ataacacttg ggggtagcta aagtgaactg tatccgacat 16500 ctggttccta cttcagggcc ataaagccta aatagcccac acgttcccct taaataagac 16560 atcacgatg 16569 // ID KC345790; SV 1; circular; genomic DNA; STD; HUM; 16570 BP. XX AC KC345790; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT6_182 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16570 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16570 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; e54922b4f28cddc4550a150b5501ad56. DR Ensembl-Gn; ENSG00000198840; homo_sapiens. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Tr; ENST00000361227; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16570 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT6_182" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="||Ani" FT /db_xref="taxon:9606" FT /haplogroup="L0d1" FT D-loop complement(join(16025..16570,1..576)) FT tRNA 577..647 FT /product="tRNA-Phe" FT rRNA 648..1601 FT /product="12S ribosomal RNA" FT tRNA 1602..1670 FT /product="tRNA-Val" FT rRNA 1671..3229 FT /product="16S ribosomal RNA" FT tRNA 3230..3304 FT /product="tRNA-Leu" FT gene 3307..4262 FT /gene="ND1" FT CDS 3307..4262 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4261..4262,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q4GRH9" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:Q4GRH9" FT /protein_id="AGD82225.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPTTISSIPPQT" FT tRNA 4263..4331 FT /product="tRNA-Ile" FT tRNA complement(4329..4400) FT /product="tRNA-Gln" FT tRNA 4402..4469 FT /product="tRNA-Met" FT gene 4470..5511 FT /gene="ND2" FT CDS 4470..5511 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5511,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82226.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5512..5576 FT /product="tRNA-Trp" FT tRNA complement(5587..5655) FT /product="tRNA-Ala" FT tRNA complement(5657..5729) FT /product="tRNA-Asn" FT tRNA complement(5761..5826) FT /product="tRNA-Cys" FT tRNA complement(5826..5891) FT /product="tRNA-Tyr" FT gene 5905..7446 FT /gene="COX1" FT CDS 5905..7446 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B1J9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B1J9" FT /protein_id="AGD82227.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7446..7517) FT /product="tRNA-Ser" FT tRNA 7519..7586 FT /product="tRNA-Asp" FT gene 7587..8270 FT /gene="COX2" FT CDS 7587..8270 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /db_xref="GOA:Q9B1F9" FT /db_xref="InterPro:IPR001505" FT /db_xref="InterPro:IPR002429" FT /db_xref="InterPro:IPR008972" FT /db_xref="InterPro:IPR011759" FT /db_xref="InterPro:IPR014222" FT /db_xref="InterPro:IPR034210" FT /db_xref="InterPro:IPR036257" FT /db_xref="UniProtKB/TrEMBL:Q9B1F9" FT /protein_id="AGD82228.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIETPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8296..8365 FT /product="tRNA-Lys" FT gene 8367..8573 FT /gene="ATP8" FT CDS 8367..8573 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82229.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8528..9208 FT /gene="ATP6" FT CDS 8528..9208 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B185" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B185" FT /protein_id="AGD82230.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9208..9991 FT /gene="COX3" FT CDS 9208..9991 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9991,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82231.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9992..10059 FT /product="tRNA-Gly" FT gene 10060..10405 FT /gene="ND3" FT CDS 10060..10405 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10405,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXZ5" FT /db_xref="InterPro:IPR000440" FT /db_xref="InterPro:IPR038430" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ5" FT /protein_id="AGD82232.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWTE" FT tRNA 10406..10470 FT /product="tRNA-Arg" FT gene 10471..10767 FT /gene="ND4L" FT CDS 10471..10767 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:E2FR42" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:E2FR42" FT /protein_id="AGD82233.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVAISNTYGLDYVHNLNLLQC" FT gene 10761..12138 FT /gene="ND4" FT CDS 10761..12138 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12138,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82234.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12139..12207 FT /product="tRNA-His" FT tRNA 12208..12266 FT /product="tRNA-Ser" FT tRNA 12267..12337 FT /product="tRNA-Leu" FT gene 12338..14149 FT /gene="ND5" FT CDS 12338..14149 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q4F0F4" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q4F0F4" FT /protein_id="AGD82235.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPTSPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14150..14674) FT /gene="ND6" FT CDS complement(14150..14674) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82236.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14675..14743) FT /product="tRNA-Glu" FT gene 14748..15888 FT /gene="CYTB" FT CDS 14748..15888 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15888,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q15H14" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q15H14" FT /protein_id="AGD82237.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIITALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLLSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15889..15954 FT /product="tRNA-Thr" FT tRNA complement(15956..16024) FT /product="tRNA-Pro" XX SQ Sequence 16570 BP; 5134 A; 5186 C; 2162 G; 4088 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcgaac atacctacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tattttcccc tcccactccc atactactaa 480 tctcatcaat acaaccccgc ccatcctacc cagcacacac acaccgctgc taaccccata 540 ccccgaacca accaaacccc aaagacaccc cccacagttt atgtagctta cctcctcaaa 600 gcaatacact gaaaatgttt agacgggctc acatcacccc ataaacaaat aggtttggtc 660 ctagcctttc tattagctct tagtaagatt acacatgcaa gcatccccgt tccagtgaat 720 tcaccctcta aatcaccacg atcaaaaggg acaagcatca agcacgcaac aatgcagctc 780 aaaacgctta gcctagccac acccccacgg gaaacagcag tgataaacct ttagcaataa 840 acgaaagttt aactaagcta tactaacccc agggttggtc aatttcgtgc cagccaccgc 900 ggtcacacga ttaacccaag tcaatagaag ccggcgtaaa gagtgtttta gatcaccccc 960 tccccaataa agctaaaact cacctgagtt gtaaaaaact ccagttgaca caaaataaac 1020 tacgaaagtg gctttaacat atctgaatac acaatagcta agacccaaac tgggattaga 1080 taccccacta tgcttagccc taaacctcaa cagttaaatc aacaaaactg ctcgccagaa 1140 cactacgagc cacagcttaa aactcaaagg acctggcggt gcttcatatc cctctagagg 1200 agcctgttct gtaatcgata aaccccgatc aacctcacca cctcttgctc agcctatata 1260 ccgccatctt cagcaaaccc tgatgaaggc tacaaagtaa gcgcaagtac ccacgtaaag 1320 acgttaggtc aaggtgtagc ccatgaggtg gcaagaaatg ggctacattt tctaccccag 1380 aaaactacga tagcccttat gaaacttaag ggtcgaaggt ggatttagca gtaaactaag 1440 agtagagtgc ttagttgaac agggccctga agcgcgtaca caccgcccgt caccctcctc 1500 aagtatactt caaaggacat ttaactaaaa cccctacgca tttatataga ggagacaagt 1560 cgtaacatgg taagtgtact ggaaagtgca cttggacgaa ccagagtgta gcttaacaca 1620 aagcacccaa cttacactta ggagatttca acttaacttg accgctctga gctaaaccta 1680 gccccaaacc cactccacct tactaccaga caaccttagc caaaccattt acccaaataa 1740 agtataggcg atagaaattg aaacctggcg caatagatat agtaccgcaa gggaaagatg 1800 aaaaattata accaagcata atatagcaag gactaacccc tataccttct gcataatgaa 1860 ttaactagaa ataactttgc aaggagagcc aaagctaaga cccccgaaac cagacgagct 1920 acctaagaac agctaaaaga gcacacccgt ctatgtagca aaatagtggg aagatttata 1980 ggtagaggcg acaaacctac cgagcctggt gatagctggt tgtccaagat agaatcttag 2040 ttcaacttta aatttgccca cagaaccctc taaatcccct tgtaaattta actgttagtc 2100 caaagaggaa cagctctttg gacactagga aaaaaccttg tagagagagt aaaaaattta 2160 acacccatag taggcctaaa agcagccacc aattaagaaa gcgttcaagc tcaacaccca 2220 ctacctaaaa aatcccaaac atataactga actcctcaca cccaattgga ccaatctatc 2280 accctataga agaactaatg ttagtataag taacatgaaa acattctcct ccgcataagc 2340 ctgcgtcaga ttaaaacact gaactgacaa ttaacagccc aatatctaca atcaaccaac 2400 aagtcattat taccctcact gtcaacccaa cacaggcatg ctcataagga aaggttaaaa 2460 aaagtaaaag gaactcggca aatccttacc ccgcctgttt accaaaaaca tcacctctag 2520 catcaccagt attagaggca ccgcctgccc agtgacacat gtttaacggc cgcggtaccc 2580 taaccgtgca aaggtagcat aatcacttgt tccttaaata gggacctgta tgaatggctc 2640 cacgagggtt cagctgtctc ttacttttaa ccagtgaaat tgacctgccc gtgaagaggc 2700 gggcataaca cagcaagacg agaagaccct atggagcttt aatttattaa tgcaaacaat 2760 acctaacaaa cccacaggtc ctaaactacc aaacctgcat taaaaatttc ggttggggcg 2820 acctcggagc agaacccaac ctccgagcag tacatgctaa gacttcacca gtcaaagcga 2880 actaccatac tcaattgatc caataacttg accaacggaa caagttaccc tagggataac 2940 agcgcaatcc tattctagag tccatatcaa caatagggtt tacgacctcg atgttggatc 3000 aggacatccc gatggtgcag ccgctattaa aggttcgttt gttcaacgat taaagtccta 3060 cgtgatctga gttcagaccg gagtaatcca ggtcggtttc tatctacttc aaattcctcc 3120 ctgtacgaaa ggacaagaga aataaggcct acttcacaaa gcgccttccc ccgtaaatga 3180 tatcatctca acttagtatt atacccacac ccacccaaga acagggtttg ttaagatggc 3240 agagcccggt aatcgcataa aacttaaaac tttacagtca gaggttcaat tcctcttctt 3300 aacaacatac ccatggccaa cctcctactc ctcattgtac ccattctaat cgcaatggca 3360 ttcctaatgc ttaccgaacg aaaaattcta ggctatatac aactacgcaa aggccccaac 3420 gttgtaggcc cctacggact actacaaccc ttcgctgacg ccataaaact cttcaccaaa 3480 gagcccctaa aacccgccac atctaccatc accctataca tcaccgcccc aaccttagct 3540 ctcaccatcg ctcttctact atgaaccccc ctccccatac ccaaccccct ggttaacctc 3600 aacctaggcc tcctattcat tctagccacc tctagcctag ccgtttactc aatcctctga 3660 tcagggtgag catcaaactc aaactacgcc ctgatcggcg cactgcgagc agtagcccaa 3720 acaatctcat atgaagtcac cctagccatc attctgctat caacattact aataagtggc 3780 tcctttaacc tctccaccct tatcacaaca caagaacacc tctgattact cctgccatca 3840 tgacccttgg ccataatatg atttatctcc acactagcag agaccaaccg aacccccttc 3900 gaccttgccg aaggggagtc cgaactagtc tcaggcttca acatcgaata cgccgcaggc 3960 cccttcgccc tattcttcat agccgaatac acaaacatta ttataataaa caccctcacc 4020 actacaatct tcctaggaac aacatatgac gcactctccc ctgaactcta cacaacatat 4080 tttgtcacca agaccctact tctgacctcc ctgttcttat gaattcgaac agcatacccc 4140 cgattccgct acgaccaact catacacctc ctatgaaaaa acttcctacc actcacccta 4200 gcattactta tatgatatgt ctccataccc actacaatct ccagcattcc ccctcaaacc 4260 taagaaatat gtctgataaa agagttactt tgatagagta aataatagga gtttaaaccc 4320 ccttatttct aggactatga gaatcgaacc catccctgag aatccaaaat tctccgtgcc 4380 acctatcaca ccccatccta aagtaaggtc agctaaataa gctatcgggc ccataccccg 4440 aaaatgttgg ttataccctt cccgtactaa ttaatcccct ggcccaaccc gtcatctact 4500 ctaccatctt tgcaggcaca ctcatcacag cgctaagctc gcactgattt tttacctgag 4560 tcggcctaga aataaacatg ctagctttta ttccagttct aaccaaaaaa ataaaccctc 4620 gttccacaga agctgccatc aagtatttcc tcacgcaagc aaccgcatcc ataatccttc 4680 taatagctat cctcttcaac aatatactct ccggacaatg aaccataacc aatactacca 4740 atcaatactc atcattaata atcataatgg ctatagcaat aaaactagga atagccccct 4800 ttcacttctg agtcccagag gttacccaag gcacccctct gacatccggc ctgcttcttc 4860 tcacatgaca aaaactagcc cccatctcaa tcatatacca aatctctccc tcactaaacg 4920 taagccttct cctcactctc tcaatcttat ccatcatagc aggcagttga ggtggattaa 4980 accaaaccca gctacgcaaa atcttagcat actcctcaat tacccacata ggatgaataa 5040 tagcagttct accgtacaac cctaacataa ccattcttaa tttaactatt tatattatcc 5100 taactactac cgcattccta ctactcaact taaactccag caccacgacc ctactactat 5160 ctcgcacctg aaacaagcta acatgactaa cacccttaat tccatccacc ctcctctccc 5220 taggaggcct gcccccgcta accggctttt tgcccaaatg ggccattatc gaagaattca 5280 caaaaaacaa tagcctcatc atccccacca tcatagccac catcaccctc cttaacctct 5340 acttctacct acgcctaatc tactccacct caatcacact actccccata tctaacaacg 5400 taaaaataaa atgacagttt gaacatacaa aacccacccc actcctcccc acactcatcg 5460 cccttaccac gctactccta cctatctccc cttttatact aataatctta tagaaattta 5520 ggttaaatac agaccaagag ccttcaaagc cctcagtaag ttgcaatact taatttctgt 5580 aacagctaag gactgcaaaa ccccactctg catcaactga acgcaaatca gccactttaa 5640 ttaagctaag cccttactag accaatggga cttaaaccca caaacactta gttaacagct 5700 aagcacccta atcaactggc ttcaatctac ttctcccgcc gccgggaaaa aaggcgggag 5760 aagccccggc aggtttgaag ctgcttcttc gaatttgcaa ttcaatatga aaatcacctc 5820 ggagctggta aaaagaggcc taacccctgt ctttagattt acagtccaat gcttcactca 5880 gccattttac ctcacccccc actgatgttc gccgaccgtt gactattctc tacaaaccac 5940 aaagacattg gaacactata cctattattc ggcgcatgag ctggagtcct aggcacagct 6000 ctaagcctcc ttattcgagc cgagctgggc cagccaggca accttctagg taacgaccac 6060 atctacaacg ttatcgtcac agcccatgca tttgtaataa tcttcttcat agtaataccc 6120 atcataatcg gaggctttgg caactgacta gttcccctaa taatcggtgc ccccgatatg 6180 gcgttccccc gcataaacaa cataagcttc tgactcttac ctccctctct cctactcctg 6240 ctcgcatctg ctatagtgga ggccggggca ggaacaggtt gaacagtcta ccctccctta 6300 gcagggaact actcccaccc tggagcctcc gtagacctaa ccatcttctc cttacaccta 6360 gcaggtgtct cctctatctt aggggccatc aatttcatca caacaattat caatataaaa 6420 ccccctgcca taacccaata ccaaacgccc ctcttcgtct gatccgtcct aatcacagca 6480 gtcctacttc tcctatctct cccagtccta gctgctggca tcactatact actaacagac 6540 cgcaacctca acaccacctt cttcgacccc gccggaggag gagaccccat tctataccaa 6600 cacctattct gatttttcgg tcaccctgaa gtttatattc ttatcctacc aggcttcgga 6660 ataatctccc atattgtaac ttactactcc ggaaaaaaag aaccatttgg atacataggt 6720 atggtctgag ctatgatatc aattggcttc ctagggttta tcgtgtgagc acaccatata 6780 tttacagtag gaatagacgt agacacacga gcatacttca cctccgctac cataatcatc 6840 gctatcccca ccggcgtcaa agtatttagc tgactcgcca cactccacgg aagcaatatg 6900 aaatgatctg ctgcagtgct ctgagcccta ggattcatct ttcttttcac cgtaggtggc 6960 ctgactggca ttgtattagc aaactcatca ctagacatcg tactacacga cacgtactac 7020 gttgtagctc acttccacta tgtcctatca ataggagctg tatttgccat cataggaggc 7080 ttcattcact gatttcccct attctcaggc tacaccctag accaaaccta cgccaaaatc 7140 catttcgcta tcatattcat cggcgtaaat ctaactttct tcccacaaca ctttctcggc 7200 ctatccggaa tgccccgacg ttactcggac taccccgatg catacaccac atgaaatatc 7260 ctatcatctg taggctcatt catttctcta acagcagtaa tattaataat tttcatgatt 7320 tgagaagcct tcgcttcgaa gcgaaaagtc ctaatagtag aagaaccctc cataaacctg 7380 gagtgactat atggatgccc cccaccctac cacacattcg aagaacccgt atacataaaa 7440 tctagacaaa aaaggaagga atcgaacccc ccaaagctgg tttcaagcca accccatggc 7500 ctccatgact ttttcaaaaa gatattagaa aaaccatttc ataactttgt caaagttaaa 7560 ttataggcta aatcctatat atcttaatgg cacatgcagc gcaagtaggt ctacaagacg 7620 ctacttcccc tatcatagaa gagcttatca cctttcatga tcacgccctc ataatcattt 7680 tccttatctg cttcctagtc ctgtatgccc ttttcctaac actcacaaca aaactaacta 7740 atactaacat ctcagacgct caggaaatag aaaccgtctg aactatcctg cccgccatca 7800 tcctagtcct catcgccctc ccatccctac gcatccttta cataacagac gaggtcaacg 7860 atccctccct taccatcaaa tcaattggcc accaatggta ctgaacctac gagtacaccg 7920 actacggcgg actaatcttc aactcctaca tacttccccc attattccta gaaccaggcg 7980 acctgcgact ccttgacgtt gacaatcgag tagtactccc gattgaaacc cccattcgta 8040 taataattac atcacaagac gtcttgcact catgagctgt ccccacatta ggcttaaaaa 8100 cagatgcaat tccaggacgt ctaaaccaaa ccactttcac cgctacacga ccaggggtat 8160 actacggtca atgctctgaa atctgtggag caaaccacag tttcatgccc atcgtcctag 8220 aattaattcc cctaaaaatc tttgaaatag gacccgtatt taccctatag caccccctct 8280 accccctcta gagcccactg taaagctaac ttagcattaa ccttttaagt taaagattaa 8340 gagaaccaac acctctttac agtgaaatgc cccaactaaa tactaccgta tggcccacca 8400 taattacccc catactcctt acactattcc tcatcaccca actaaaaata ttaaacacaa 8460 actaccactt acctccctca ccaaagccca taaaaataaa aaattataac aaaccctgag 8520 aaccaaaatg aacgaaaatc tgttcgcttc attcattgcc cccacaatcc taggcctacc 8580 cgccgcagta ctgatcattc tatttccccc tctattgatc cccacctcca aatatctcat 8640 caacaaccga ctaattacca cccaacaatg actaatcaaa ctaacctcaa aacaaatgat 8700 agccatacac aacactaaag gacgaacctg atctcttata ctagtatcct taatcatttt 8760 tattgccaca actaacctcc tcggactcct gcctcactca tttacaccaa ccacccaact 8820 atctataaac ctagccatgg ccatcccctt atgagcgggc gcagtgatta taggctttcg 8880 ctctaagatt aaaaatgccc tagcccactt cttaccacaa ggcacaccta caccccttat 8940 ccccatacta gttattatcg aaaccatcag cctactcatt caaccaatag ccctggccgt 9000 acgcctaacc gctaacatta ctgcaggcca cctactcatg catctaattg gaagcgccac 9060 cctagcaata tcaaccatta accttccctc tacacttatc atcttcacaa ttctaattct 9120 actgactatc ctagaaatcg ctgtcgcctt aatccaagcc tacgttttca cacttctagt 9180 aagcctctac ctgcacgaca acacataatg acccaccaat cacatgccta tcatatagta 9240 aaacccagcc catgacccct aacaggggcc ctctcagccc tcctaatgac ctccggccta 9300 gccatgtgat ttcacttcca ctccataacg ctcctcatac taggcctgct aaccaacaca 9360 ctaaccatat accaatgatg gcgcgatgta acacgagaaa gcacatacca aggccaccac 9420 acaccacctg tccaaaaagg ccttcgatac gggataatcc tatttattac ctcagaagtt 9480 tttttcttcg caggattttt ctgagccttt taccactcca gcctagcccc taccccccaa 9540 ctaggagggc actggccccc aacaggcatc accccgctaa atcccctaga agtcccactc 9600 ctaaacacat ccgtattact cgcatcagga gtatcaatca cctgagctca ccatagtcta 9660 atagaaaaca accgaaacca aataattcaa gcactgctta ttacaatttt actgggtctc 9720 tattttaccc tcctacaagc ctcagagtac ttcgaatctc ccttcaccat ttccgacggc 9780 atctacggct caacattttt tgtagccaca ggcttccacg gacttcacgt cattattggc 9840 tcaactttcc tcactatctg cttcatccgc caactaatat ttcactttac atccaaacat 9900 cactttggct tcgaagccgc cgcctgatac tggcattttg tagatgtggt ttgactattt 9960 ctgtatgtct ccatctattg atgagggtct tactctttta gtataaatag taccgttaac 10020 ttccaattaa ctagttttga caacattcaa aaaagagtaa taaacttcgc cttaatttta 10080 ataatcaaca ccctcctagc cttactacta ataattatta cattttgact accacaactc 10140 aacggctaca tagaaaaatc caccccttac gagtgcggct tcgaccctat atcccccgcc 10200 cgcgtccctt tctccataaa attcttctta gtagctatta ccttcttatt atttgatcta 10260 gaaattgccc tccttttacc cctaccatga gccctacaaa caactaacct gccactaata 10320 gttatgtcat ccctcttatt aatcatcatc ctagccctaa gtctggccta tgagtgacta 10380 caaaaaggat tagactgaac cgaattggta tatagtttaa acaaaacgaa tgatttcgac 10440 tcattaaatt atgataatca tatttaccaa atgcccctca tttacataaa tattatacta 10500 gcatttacca tctcacttct aggaatacta gtatatcgct cacacctcat atcctcccta 10560 ctatgcctag aaggaataat actatcgcta ttcattatag ctactctcat aaccctcaac 10620 acccactccc tcttagccaa tattgtgcct attgccatac tagtttttgc cgcctgcgaa 10680 gcagcggtag gcctagccct actagtcgca atctccaaca catatggcct agactacgta 10740 cataacctaa acctactcca atgctaaaac taatcgtccc aacaattata ttactaccac 10800 tgacatgact ctccaaaaaa cacataattt gaatcaacac aaccacccac agcctaatta 10860 ttagcatcat ccccctacta ttttttaacc aaatcaacaa caacctattt agctgctccc 10920 caaccttttc ctccgacccc ctaacaaccc ccctcctaat actaactacc tgactcctac 10980 ccctcacaat catggcaagc caacgccact tatccagtga accactatca cgaaaaaaac 11040 tctacctctc tatactaatc tccctacaaa tctccttaat tataacattc acagccacag 11100 aactaatcat attttatatc ttcttcgaaa ccacacttat ccccaccttg gctatcatca 11160 cccgatgagg caaccagcca gaacgcctga acgcaggcac atacttccta ttctacaccc 11220 tagtaggctc ccttccccta ctcatcgcac taatttacac tcacaacacc ctaggctcac 11280 taaacattct actactcact ctcactgccc aagaactatc aaactcctga gccaacaact 11340 taatatgact agcttacaca atagctttta tagtaaagat acctctttac ggactccact 11400 tatgactccc taaagcccat gtcgaagccc ccatcgctgg gtcaatagta cttgccgcag 11460 tactcttaaa actaggcggc tatggtataa tacgcctcac actcattctc aaccccctga 11520 caaaacacat agcctacccc ttccttgtac tatccctatg aggcataatt ataacaagct 11580 ccatctgcct acgacaaaca gacctaaaat cgctcattgc atactcttca atcagccaca 11640 tagccctcgt agtaacagcc attctcatcc aaaccccctg aagcttcacc ggcgcagtca 11700 ttctcataat cgcccacgga cttacatcct cattactatt ctgcctagca aactcaaact 11760 acgaacgcac tcacagtcgc atcataatcc tctctcaagg acttcaaact ctactcccac 11820 taatagcttt ttgatgactt ctagcaagcc tcgctaacct cgccttaccc cccactatta 11880 acctactggg agaactctct gtgctagtaa ccacattctc ctgatcaaat atcactctcc 11940 tacttacagg actcaacata ctagtcacag ccctatactc cctctacata tttaccacaa 12000 cacaatgagg ctcactcacc caccacatta acaacataaa accctcattc acacgagaaa 12060 acaccctcat gttcatacac ctatccccca ttctcctcct atccctcaac cccgacatca 12120 tcaccgggtt ttcctcttgt aaatatagtt taaccaaaac atcagattgt gaatctgaca 12180 acagaggctt acgacccctt atttaccgag aaagctcaca agaactgcta actcatgccc 12240 ccatgtctaa caacatggct ttctcaactt ttaaaggata acagctatcc attggtctta 12300 ggccccaaaa attttggtgc aactccaaat aaaagtaata accatgcaca ctactataac 12360 caccctaacc ctgacttccc taattccccc catccttacc accctcgtta accctaacaa 12420 aaaaaactca tacccccatt atgtaaaatc cattgtcgca tccaccttta ttatcagtct 12480 cttccccaca acaatattca tgtgcctaga ccaagaagtt attatctcga actgacactg 12540 agccacaacc caaacaaccc agctctccct aagcttcaaa ctagactact tctccataat 12600 attcatccct gtagcattgt tcgttacatg gtccatcata gaattctcac tgtgatatat 12660 aaactcagac ccaaacatta atcagttctt caaatatcta ctcattttcc taattaccat 12720 gctaatctta gttaccgcta acaacctatt ccaactgttc atcggctgag agggcgtagg 12780 aattatatcc ttcttgctca tcagttgatg atacgcccga gcagatgcca acacagcagc 12840 cattcaagca atcctataca accgtatcgg cgatatcggt ttcatcctcg ccttagcatg 12900 atttatccta cactccaact catgagaccc acaacaaata gcccttctaa acgctaatcc 12960 aagcctcacc ccactactag gcctcctcct agcagcagca ggcaaatcag cccaattagg 13020 tctccacccc tgactcccct cagccataga aggccccacc ccagtctcag ccctactcca 13080 ctcaagcact atagttgtag caggagtctt cttactcatc cgcttccacc ccctagcaga 13140 aaatagccca ctaatccaaa ctctaacact atgcttaggc gctatcacca ctctgttcgc 13200 agcagtctgc gcccttacac aaaatgacat caaaaaaatc gtagccttct ccacttcaag 13260 tcaactagga ctcatagtag ttacaatcgg catcaaccaa ccacacctag cattcctgca 13320 catctgtacc cacgccttct tcaaagccat actatttatg tgctccgggt ccatcatcca 13380 caaccttaac aatgaacaag atattcgaaa aataggagga ctactcaaaa ccatacctct 13440 cacttcaacc tccctcacca ttggcagcct agcattagca ggaatacctt tcctcacagg 13500 tttctattcc aaagaccaca tcatcgaaac cgcaaacata tcatacacaa acgcctgagc 13560 cctatctatt actctcatcg ctacctccct gacaagcgcc tatagcactc gaataattct 13620 tctcacccta acaggtcaac ctcgcttccc tacccttact aacattaacg aaaataaccc 13680 caccctacta aaccccatta aacgcctggc agccggaagc ctattcgcag gatttctcat 13740 tactaacaac atttccccca catccccctt ccaaacaaca atccccctct acctaaaact 13800 cacagccctc gctgtcactt tcctaggact tctaacagcc ctagacctca actacctaac 13860 caacaaactt aaaataaaat ccccactatg cacattttat ttctccaaca tactcggatt 13920 ctaccctagc atcacacacc gcacaatccc ctatctaggc cttcttacga gccaaaacct 13980 gcccctactc ctcctagacc taacctgact agaaaagcta ttacctaaaa caatttcaca 14040 gcaccaaatc tccacctcca tcatcacctc aacccaaaaa ggcataatta aactttactt 14100 cctctctttc ttcttcccac tcatcctaac cctactccta atcacataac ctattccccc 14160 gagcaatctc aattacaata tatacaccaa caaacaatgt tcaaccagta actactacta 14220 atcaacgccc ataatcatac aaagcccccg caccaatagg atcctcccga atcaaccctg 14280 acccctctcc ttcataaatt attcagcttc ctacactatt aaagtttacc acaaccacca 14340 ccccatcata ctctttcacc cacagcacca atcctacctc catcgctaac cccactaaaa 14400 cactcaccaa gacctcaacc cctgaccccc atgcctcagg atactcctca atagccatcg 14460 ctgtagtata tccaaagaca accatcattc cccctaaata aattaaaaaa actattaaac 14520 ccatataacc tcccccaaaa ttcagaataa taacacaccc gaccacaccg ctaacaatca 14580 atactaaacc cccataaata ggagaaggct tagaagaaaa ccccacaaac cccattacta 14640 aacccacact caacagaaac aaagcataca tcattattct cgcacggact acaaccacga 14700 ccaatgatat gaaaaaccat cgttgtattt caactacaag aacaccaatg accccaatac 14760 gcaaaattaa ccccctaata aaattaatta accactcatt catcgacctc cccaccccat 14820 ccaacatctc cgcatgatga aacttcggct cactccttgg cgcctgcctg atcctccaaa 14880 tcaccacagg actattccta gccatgcact actcaccaga cgcctcaacc gccttttcat 14940 caatcgccca catcactcga gacgtaaatt atggctgaat catccgctac cttcacgcca 15000 atggcgcctc aatattcttt atctgcctct tcctacacat cgggcgaggc ctatattacg 15060 gatcatttct ctactcagaa acctgaaaca tcggcattat cctcctgctt gcaactatag 15120 caacagcctt cataggctat gtcctcccgt gaggccaaat atcattctga ggggccacag 15180 taattacaaa cttactatcc gccatcccat acattggaac agacctagtt caatgaatct 15240 gaggaggcta ctcagtagac agtcccaccc tcacacgatt ctttaccttt cacttcatct 15300 tgcccttcat tattacagcc ctagcagcac tccacctcct attcttgcac gaaacgggat 15360 caaacaaccc cctaggaatc acctcccatt ccgataaaat caccttccac ccttactaca 15420 caatcaaaga cgccctcggc ttacttctct tccttctctc cttaataaca ttaacactac 15480 tctcaccaga cctcctaggc gacccagaca attataccct agccaacccc ttaaacaccc 15540 ctccccacat caagcccgaa tgatatttcc tattcgccta cacaattctc cgatccgtcc 15600 ctaacaaact aggaggcgtc cttgccctat tactatccat cctcatccta gcaataatcc 15660 ccatcctcca tatatccaaa caacaaagca taatatttcg cccactaagc caatcacttt 15720 attgactcct agccgcagac ctcctcattc taacctgaat cggaggacaa ccagtaagct 15780 acccttttac catcattgga caagtagcat ccgtactata cttcacaaca atcctaatcc 15840 taataccaac tatctcccta attgaaaaca aaatactcaa atgggcctgt ccttgtagta 15900 taaactaata caccagtctt gtaaaccgga aatgaaaacc tctttccaag gacaaatcag 15960 agaaaaagtc tttaactcca ccattagcac ccaaagctaa gattctaatt taaactattc 16020 tctgttcttt catggggaag cagatttggg taccacccaa gtattgactc acccatcaac 16080 aaccgctatg tatttcgtac attactgcca gccaccatga atattgtaca gtaccataaa 16140 tacttgacca cctgtagtac ataaaaaccc aatccacatt aaaaccctcc ccccatgctt 16200 acaagcaagt acagcaatca accttcaact gtcacacatc aaccgcaact ccaaagccac 16260 ccctcaccca ctaggatacc aacaaaccta cccaccctta acagtacata gcacataaag 16320 ccatttaccg tacatagcac attacagtca aatcccttct cgtccccatg gatgaccccc 16380 ctcagatagg ggtcccttga ccaccatcct ccgtgaaatc aatatcccgc acaagagtgc 16440 tactctcctc gctccgggcc cataacactt gggggtagct aaagtgaact gtatccgaca 16500 tctggttcct acttcagggc cataaagcct aaatagccca cacgttcccc ttaaataaga 16560 catcacgatg 16570 // ID KC345791; SV 1; circular; genomic DNA; STD; HUM; 16568 BP. XX AC KC345791; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT6_183 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16568 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16568 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; 938f7fcedf21c5c795710c9673534faa. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16568 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT6_183" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="||Ani" FT /db_xref="taxon:9606" FT /haplogroup="L0d1" FT D-loop complement(join(16023..16568,1..576)) FT tRNA 577..647 FT /product="tRNA-Phe" FT rRNA 648..1601 FT /product="12S ribosomal RNA" FT tRNA 1602..1670 FT /product="tRNA-Val" FT rRNA 1671..3228 FT /product="16S ribosomal RNA" FT tRNA 3229..3303 FT /product="tRNA-Leu" FT gene 3306..4261 FT /gene="ND1" FT CDS 3306..4261 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4260..4261,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q4GRH9" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:Q4GRH9" FT /protein_id="AGD82238.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPTTISSIPPQT" FT tRNA 4262..4330 FT /product="tRNA-Ile" FT tRNA complement(4328..4399) FT /product="tRNA-Gln" FT tRNA 4401..4468 FT /product="tRNA-Met" FT gene 4469..5510 FT /gene="ND2" FT CDS 4469..5510 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5510,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82239.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5511..5575 FT /product="tRNA-Trp" FT tRNA complement(5586..5654) FT /product="tRNA-Ala" FT tRNA complement(5656..5728) FT /product="tRNA-Asn" FT tRNA complement(5760..5825) FT /product="tRNA-Cys" FT tRNA complement(5825..5890) FT /product="tRNA-Tyr" FT gene 5903..7444 FT /gene="COX1" FT CDS 5903..7444 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B1J9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B1J9" FT /protein_id="AGD82240.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7444..7515) FT /product="tRNA-Ser" FT tRNA 7517..7584 FT /product="tRNA-Asp" FT gene 7585..8268 FT /gene="COX2" FT CDS 7585..8268 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /protein_id="AGD82241.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8294..8363 FT /product="tRNA-Lys" FT gene 8365..8571 FT /gene="ATP8" FT CDS 8365..8571 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82242.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8526..9206 FT /gene="ATP6" FT CDS 8526..9206 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:L7XJ25" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:L7XJ25" FT /protein_id="AGD82243.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGPVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9206..9989 FT /gene="COX3" FT CDS 9206..9989 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9989,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82244.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9990..10057 FT /product="tRNA-Gly" FT gene 10058..10403 FT /gene="ND3" FT CDS 10058..10403 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10403,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82245.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWAE" FT tRNA 10404..10468 FT /product="tRNA-Arg" FT gene 10469..10765 FT /gene="ND4L" FT CDS 10469..10765 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AGD82246.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10759..12136 FT /gene="ND4" FT CDS 10759..12136 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12136,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82247.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12137..12205 FT /product="tRNA-His" FT tRNA 12206..12264 FT /product="tRNA-Ser" FT tRNA 12265..12335 FT /product="tRNA-Leu" FT gene 12336..14147 FT /gene="ND5" FT CDS 12336..14147 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q4F0F4" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q4F0F4" FT /protein_id="AGD82248.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPTSPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14148..14672) FT /gene="ND6" FT CDS complement(14148..14672) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /db_xref="GOA:Q7GRU6" FT /db_xref="InterPro:IPR001457" FT /db_xref="UniProtKB/TrEMBL:Q7GRU6" FT /protein_id="AGD82249.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLVYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14673..14741) FT /product="tRNA-Glu" FT gene 14746..15886 FT /gene="CYTB" FT CDS 14746..15886 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15886,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q6VJ80" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q6VJ80" FT /protein_id="AGD82250.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15887..15952 FT /product="tRNA-Thr" FT tRNA complement(15954..16022) FT /product="tRNA-Pro" XX SQ Sequence 16568 BP; 5129 A; 5184 C; 2167 G; 4088 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ctattattta tcgcacctac gttcaatatt 180 acaggcgaac atacctacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tattttcccc tcccactccc atactactaa 480 tctcatcaat acaaccccgc ccatcctacc cagcacacac acaccgctgc taaccccata 540 ccccgaacca accaaacccc aaagacaccc cccacagttt atgtagctta cctcctcaaa 600 gcaatacact gaaaatgttt agacgggctc acatcacccc ataaacaaat aggtttggtc 660 ctagcctttc tattagctct tagtaagatt acacatgcaa gcatccccgt tccagtgaat 720 tcaccctcta aatcaccacg atcaaaaggg acaagcatca agcacgcaac aatgcagctc 780 aaaacgctta gcctagccac acccccacgg gaaacagcag tgataaacct ttagcaataa 840 acgaaagttt aactaagcta tactaacccc agggttggtc aatttcgtgc cagccaccgc 900 ggtcacacga ttaacccaag tcaatagaag ccggcgtaaa gagtgtttta gatcaccccc 960 tccccaataa agctaaaact cacctgagtt gtaaaaaact ccagttgaca caaaataaac 1020 tacgaaagtg gctttaacat atctgaatac acaatagcta agacccaaac tgggattaga 1080 taccccacta tgcttagccc taaacctcaa cagttaaatc aacaaaactg ctcgccagaa 1140 cactacgagc cacagcttaa aactcaaagg acctggcggt gcttcatatc cctctagagg 1200 agcctgttct gtaatcgata aaccccgatc aacctcacca ccccttgctc agcctatata 1260 ccgccatctt cagcaaaccc tgatgaaggc tacaaagtaa gcgcaagtac ccacgtaaag 1320 acgttaggtc aaggtgtagc ccatgaggtg gcaagaaatg ggctacattt tctaccccag 1380 aaaactacga tagcccttat gaaacttaag ggtcgaaggt ggatttagca gtaaactaag 1440 agtagagtgc ttagttgaac agggccctga agcgcgtaca caccgcccgt caccctcctc 1500 aagtatactt caaaggacat ttaactaaaa cccctacgca tttatataga ggagacaagt 1560 cgtaacatgg taagtgtact ggaaagtgca cttggacgaa ccagagtgta gcttaacaca 1620 aagcacccaa cttacactta ggagatttca acttaacttg accgctctga gctaaaccta 1680 gccccaaacc cactccacct tactaccaga caaccttagc caaaccattt acccaaataa 1740 agtataggcg atagaaattg aaacctggcg caatagatat agtaccgcaa gggaaagatg 1800 aaaaattata accaagcata atatagcaag gactaacccc tataccttct gcataatgaa 1860 ttaactagaa ataactttgc aaggagagcc aaagctaaga cccccgaaac cagacgagct 1920 acctaagaac agctaaaaga gcacacccgt ctatgtagca aaatagtggg aagatttata 1980 ggtagaggcg acaaacctac cgagcctggt gatagctggt tgtccaagat agaatcttag 2040 ttcaacttta aatttgccca cagaaccctc taaatcccct tgtaaattta actgttagtc 2100 caaagaggaa cagctctttg gacactagga aaaaaccttg tagagagagt aaaaaattta 2160 acacccatag taggcctaaa agcagccacc aattaagaaa gcgttcaagc tcaacaccca 2220 ctacctaaaa aatcccaaac atataactga actcctcaca cccaattgga ccaatctatc 2280 accctataga agaactaatg ttagtataag taacatgaaa acattctcct ccgcataagc 2340 ctgcgtcaga ttaaaacact gaactgacaa ttaacagccc aatatctaca atcaaccaac 2400 aagtcattat taccctcact gtcaacccaa cacaggcatg ctcataagga aaggttaaaa 2460 aaagtaaaag gaactcggca aatcttaccc cgcctgttta ccaaaaacat cacctctagc 2520 atcaccagta ttagaggcac cgcctgccca gtgacacatg tttaacggcc gcggtaccct 2580 aaccgtgcaa aggtagcata atcacttgtt ccttaaatag ggacctgtat gaatggctcc 2640 acgagggttc agctgtctct tacttttaac cagtgaaatt gacctgcccg tgaagaggcg 2700 ggcataacac agcaagacga gaagacccta tggagcttta atttattaat gcaaacaata 2760 cctaacaaac ccacaggtcc taaactacca aacctgcatt aaaaatttcg gttggggcga 2820 cctcggagca gaacccaacc tccgagcagt acatgctaag acttcaccag tcaaagcgaa 2880 ctaccatact caattgatcc aataacttga ccaacggaac aagttaccct agggataaca 2940 gcgcaatcct attctagagt ccatatcaac aatagggttt acgacctcga tgttggatca 3000 ggacatcccg atggtgcagc cgctattaaa ggttcgtttg ttcaacgatt aaagtcctac 3060 gtgatctgag ttcagaccgg agtaatccag gtcggtttct atctacttca aattcctccc 3120 tgtacgaaag gacaagagaa ataaggccta cttcacaaag cgccttcccc cgtaaatgat 3180 atcatctcaa cttagtatta tacccacacc cacccaagaa cagggtttgt taagatggca 3240 gagcccggta atcgcataaa acttaaaact ttacagtcag aggttcaatt cctcttctta 3300 acaacatacc catggccaac ctcctactcc tcattgtacc cattctaatc gcaatggcat 3360 tcctaatgct taccgaacga aaaattctag gctatataca actacgcaaa ggccccaacg 3420 ttgtaggccc ctacggacta ctacaaccct tcgctgacgc cataaaactc ttcaccaaag 3480 agcccctaaa acccgccaca tctaccatca ccctatacat caccgccccg accttagctc 3540 tcaccatcgc tcttctacta tgaacccccc tccccatacc caaccccctg gttaacctca 3600 acctaggcct cctatttatt ctagccacct ctagcctagc cgtttactca atcctctgat 3660 cagggtgagc atcaaactca aactacgccc tgatcggcgc actgcgagca gtagcccaaa 3720 caatctcata tgaagtcacc ctagccatca ttctgctatc aacattacta ataagtggct 3780 cctttaacct ctccaccctt atcacaacac aagaacacct ctgattactc ctgccatcat 3840 gacccttggc cataatatga tttatctcca cactagcaga gaccaaccga acccccttcg 3900 accttgccga aggggagtcc gaactagtct caggcttcaa catcgaatac gccgcaggcc 3960 ccttcgccct attcttcata gccgaataca caaacattat tataataaac accctcacca 4020 ctacaatctt cctaggaaca acatatgacg cactctcccc tgaactctac acaacatatt 4080 ttgtcaccaa gaccctactt ctgacctccc tgttcttatg aattcgaaca gcataccccc 4140 gattccgcta cgaccaactc atacacctcc tatgaaaaaa cttcctacca ctcaccctag 4200 cattacttat atgatatgtc tccataccca ctacaatctc cagcattccc cctcaaacct 4260 aagaaatatg tctgataaaa gagttacttt gatagagtaa ataataggag tttaaacccc 4320 cttatttcta ggactatgag aatcgaaccc atccctgaga atccaaaatt ctccgtgcca 4380 cctatcacac cccatcctaa agtaaggtca gctaaataag ctatcgggcc cataccccga 4440 aaatgttggt tatacccttc ccgtactaat taatcccctg gcccaacccg tcatctactc 4500 taccatcttt gcaggcacac tcatcacagc gctaagctcg cactgatttt ttacctgagt 4560 aggcctagaa ataaacatgc tagcttttat tccagttcta accaaaaaaa taaaccctcg 4620 ttccacagaa gctgccatca agtatttcct cacgcaagca accgcatcca taatccttct 4680 aatagctatc ctcttcaaca atatactctc cggacaatga accataacca atactaccaa 4740 tcaatactca tcattaataa tcataatggc tatagcaata aaactaggaa tagccccctt 4800 tcacttctga gtcccagagg ttacccaagg cacccctctg acatccggcc tgcttcttct 4860 cacatgacaa aaactagccc ccatctcaat catataccaa atctctccct cactaaacgt 4920 aagccttctc ctcactctct caatcttatc catcatagca ggcagttgag gtggattaaa 4980 ccaaacccag ctacgcaaaa tcttagcata ctcctcaatt acccacatag gatgaataat 5040 agcagttcta ccgtacaacc ctaacataac cattcttaat ttaactattt atattatcct 5100 aactactacc gcattcctac tactcaactt aaactccagc accacgaccc tactactatc 5160 tcgcacctga aacaaactaa catgactaac acccttaatt ccatccaccc tcctctccct 5220 aggaggcctg cccccgctaa ccggcttttt gcccaaatgg gccattatcg aagaattcac 5280 aaaaaacaat agcctcatca tccccaccat catagccacc atcaccctcc ttaacctcta 5340 cttctaccta cgcctaatct actccacctc aatcacacta ctccccatat ctaacaacgt 5400 aaaaataaaa tgacagtttg aacatacaaa acccacccca ctcctcccca cactcatcgc 5460 ccttaccacg ctactcctac ctatctcccc ttttatacta ataatcttat agaaatttag 5520 gttaaataca gaccaagagc cttcaaagcc ctcagtaagt tgcaatactt aatttctgta 5580 acagctaagg actgcaaaac cccactctgc atcaactgaa cgcaaatcag ccactttaat 5640 taagctaagc ccttactaga ccaatgggac ttaaacccac aaacacttag ttaacagcta 5700 agcaccctaa tcaactggct tcaatctact tctcccgccg ccgggaaaaa aggcgggaga 5760 agccccggca ggtttgaagc tgcttcttcg aatttgcaat tcaatatgaa aatcacctcg 5820 gagctggtaa aaagaggcct aacccctgtc tttagattta cagtccaatg cttcactcag 5880 ccattttacc tcacccccac tgatgttcgc cgaccgttga ctattctcta caaaccacaa 5940 agacattgga acactatacc tattattcgg cgcatgagct ggagtcctag gcacagctct 6000 aagcctcctt attcgagccg agctgggcca gccaggcaac cttctaggta acgaccacat 6060 ctacaacgtt atcgtcacag cccatgcatt tgtaataatc ttcttcatag taatacccat 6120 cataatcgga ggctttggca actgactagt tcccctaata atcggtgccc ccgatatggc 6180 gttcccccgc ataaacaaca taagcttctg actcttacct ccctctctcc tactcctgct 6240 cgcatctgct atagtggagg ccggggcagg aacaggttga acagtctacc ctcccttagc 6300 agggaactac tcccaccctg gagcctccgt agacctaacc atcttctcct tacacctagc 6360 aggtgtctcc tctatcttag gggccatcaa tttcatcaca acaattatca atataaaacc 6420 ccctgccata acccaatacc aaacgcccct cttcgtctga tccgtcctaa tcacagcagt 6480 cctacttctc ctatctctcc cagtcctagc tgctggcatc actatactac taacagaccg 6540 caacctcaac accaccttct tcgaccccgc cggaggagga gaccccattc tataccaaca 6600 cctattctga tttttcggtc accctgaagt ttatattctt atcctaccag gcttcggaat 6660 aatctcccat attgtaactt actactccgg aaaaaaagaa ccatttggat acataggtat 6720 ggtctgagct atgatatcaa ttggcttcct agggtttatc gtgtgagcac accatatatt 6780 tacagtagga atagacgtag acacacgagc atacttcacc tccgctacca taatcatcgc 6840 tatccccacc ggcgtcaaag tatttagctg actcgccaca ctccacggaa gcaatatgaa 6900 atgatctgct gcagtgctct gagccctagg attcatcttt cttttcaccg taggtggcct 6960 gactggcatt gtattagcaa actcatcact agacatcgta ctacacgaca cgtactacgt 7020 tgtagctcac ttccactatg tcctatcaat aggagctgta tttgccatca taggaggctt 7080 cattcactga tttcccctat tctcaggcta caccctagac caaacctacg ccaaaatcca 7140 tttcgctatc atattcatcg gcgtaaatct aactttcttc ccacaacact ttctcggcct 7200 atccggaatg ccccgacgtt actcggacta ccccgatgca tacaccacat gaaatatcct 7260 atcatctgta ggctcattca tttctctaac agcagtaata ttaataattt tcatgatttg 7320 agaagccttc gcttcgaagc gaaaagtcct aatagtagaa gaaccctcca taaacctgga 7380 gtgactatat ggatgccccc caccctacca cacattcgaa gaacccgtat acataaaatc 7440 tagacaaaaa aggaaggaat cgaacccccc aaagctggtt tcaagccaac cccatggcct 7500 ccatgacttt ttcaaaaaga tattagaaaa accatttcat aactttgtca aagttaaatt 7560 ataggctaaa tcctatatat cttaatggca catgcagcgc aagtaggtct acaagacgct 7620 acttccccta tcatagaaga gcttatcacc tttcatgatc acgccctcat aatcattttc 7680 cttatctgct tcctagtcct gtatgccctt ttcctaacac tcacaacaaa actaactaat 7740 actaacatct cagacgctca ggaaatagaa accgtctgaa ctatcctgcc cgccatcatc 7800 ctagtcctca tcgccctccc atccctacgc atcctttaca taacagacga ggtcaacgat 7860 ccctccctta ccatcaaatc aattggccac caatggtact gaacctacga gtacaccgac 7920 tacggcggac taatcttcaa ctcctacata cttcccccat tattcctaga accaggcgac 7980 ctgcgactcc ttgacgttga caatcgagta gtactcccga ttgaagcccc cattcgtata 8040 ataattacat cacaagacgt cttgcactca tgagctgtcc ccacattagg cttaaaaaca 8100 gatgcaattc caggacgtct aaaccaaacc actttcaccg ctacacgacc aggggtatac 8160 tacggtcaat gctctgaaat ctgtggagca aaccacagtt tcatgcccat cgtcctagaa 8220 ttaattcccc taaaaatctt tgaaatagga cccgtattta ccctatagca ccccctctac 8280 cccctctaga gcccactgta aagctaactt agcattaacc ttttaagtta aagattaaga 8340 gaaccaacac ctctttacag tgaaatgccc caactaaata ctaccgtatg gcccaccata 8400 attaccccca tactccttac actattcctc atcacccaac taaaaatatt aaacacaaac 8460 taccacttac ctccctcacc aaagcccata aaaataaaaa attataacaa accctgagaa 8520 ccaaaatgaa cgaaaatctg ttcgcttcat tcattgcccc cacaatccta ggcctacccg 8580 ccgcagtact gatcattcta tttccccctc tattgatccc cacctccaaa tatctcatca 8640 acaaccgact aattaccacc caacaatgac taatcaaact aacctcaaaa caaatgatag 8700 ccatacacaa cactaaagga cgaacctgat ctcttatact agtatcctta atcattttta 8760 ttgccacaac taacctcctc ggactcctgc ctcactcatt tacaccaacc actcaactat 8820 ctataaacct agccatggcc atccccttat gagcgggccc agtgattata ggctttcgct 8880 ctaagattaa aaatgcccta gcccacttct taccacaagg cacacctaca ccccttatcc 8940 ccatactagt tattatcgaa accatcagcc tactcattca accaatagcc ctggccgtac 9000 gcctaaccgc taacattact gcaggccacc tactcatgca tctaattgga agcgccaccc 9060 tagcaatatc aaccattaac cttccctcta cacttatcat cttcacaatt ctaattctac 9120 tgactatcct agaaatcgct gtcgccttaa tccaagccta cgttttcaca cttctagtaa 9180 gcctctacct gcacgacaac acataatgac ccaccaatca catgcctatc atatagtaaa 9240 acccagccca tgacccctaa caggggccct ctcagccctc ctaatgacct ccggcctagc 9300 catgtgattt cacttccact ccataacgct cctcatacta ggcctgctaa ccaacacact 9360 aaccatatac caatgatggc gcgatgtaac acgagaaagc acataccaag gccaccacac 9420 accacctgtc caaaaaggcc ttcgatacgg gataatccta tttattacct cagaagtttt 9480 tttcttcgca ggatttttct gagcctttta ccactccagc ctagccccta ccccccaact 9540 aggagggcac tggcccccaa caggcatcac cccgctaaat cccctagaag tcccactcct 9600 aaacacatcc gtattactcg catcaggagt atcaatcacc tgagctcacc atagtctaat 9660 agaaaacaac cgaaaccaaa taattcaagc actgcttatt acaattttac tgggtctcta 9720 ttttaccctc ctacaagcct cagagtactt cgaatctccc ttcaccattt ccgacggcat 9780 ctacggctca acattttttg tagccacagg cttccacgga cttcacgtca ttattggctc 9840 aactttcctc actatctgct tcatccgcca actaatattt cactttacat ccaaacatca 9900 ctttggcttc gaagccgccg cctgatactg gcattttgta gatgtggtct gactatttct 9960 gtatgtctcc atctattgat gagggtctta ctcttttagt ataaatagta ccgttaactt 10020 ccaattaact agttttgaca acattcaaaa aagagtaata aacttcgcct taattttaat 10080 aatcaacacc ctcctagcct tactactaat aattattaca ttttgactac cacaactcaa 10140 cggctacata gaaaaatcca ccccttacga gtgcggcttc gaccctatat cccccgcccg 10200 cgtccctttc tccataaaat tcttcttagt agctattacc ttcttattat ttgatctaga 10260 aattgccctc cttttacccc taccatgggc cctacaaaca actaacctgc cactaatagt 10320 tatgtcatcc ctcttattaa tcatcatcct agccctaagt ctggcctatg agtgactaca 10380 aaaaggatta gactgagccg aattggtata tagtttaaac aaaacgaatg atttcgactc 10440 attaaattat gataatcata tttaccaaat gcccctcatt tacataaata ttatactagc 10500 atttaccatc tcacttctag gaatactagt atatcgctca cacctcatat cctccctact 10560 atgcctagaa ggaataatac tatcgctatt cattatagct actctcataa ccctcaacac 10620 ccactccctc ttagccaata ttgtgcctat tgccatacta gtttttgccg cctgcgaagc 10680 agcggtaggc ctagccctac tagtctcaat ctccaacaca tatggcctag actacgtaca 10740 taacctaaac ctactccaat gctaaaacta atcgtcccaa caattatatt actaccactg 10800 acatgactct ccaaaaaaca cataatttga atcaacacaa ccacccacag cctaattatt 10860 agcatcatcc ccctactatt ttttaaccaa atcaacaaca acctatttag ctgctcccca 10920 accttttcct ccgaccccct aacaaccccc ctcctaatac taactacctg actcctaccc 10980 ctcacaatca tggcaagcca acgccactta tccagtgaac cactatcacg aaaaaaactc 11040 tacctctcta tactaatctc cctacaaatc tccttaatta taacattcac agccacagaa 11100 ctaatcatat tttacatctt cttcgaaacc acacttatcc ccaccttggc tatcatcacc 11160 cgatgaggca accagccaga acgcctgaac gcaggcacat acttcctatt ctacacccta 11220 gtaggctccc ttcccctact catcgcacta atttacactc acaacaccct aggctcacta 11280 aacattctac tactcactct cactgcccaa gaactatcaa actcctgagc caacaactta 11340 atatgactag cttacacaat agcttttata gtaaagatac ctctttacgg actccactta 11400 tgactcccta aagcccatgt cgaagccccc atcgctgggt caatagtact tgccgcagta 11460 ctcttaaaac taggcggcta tggtataata cgcctcacac tcattctcaa ccccctgaca 11520 aaacacatag cctacccctt ccttgtacta tccctatgag gcataattat aacaagctcc 11580 atctgcctac gacaaacaga cctaaaatcg ctcattgcat actcctcaat cagccacata 11640 gccctcgtag taacagccat tctcatccaa accccctgaa gcttcaccgg cgcagtcatt 11700 ctcataatcg cccacggact tacatcctca ttactattct gcctagcaaa ctcaaactac 11760 gaacgcactc acagtcgcat cataatcctc tctcaaggac ttcaaactct actcccacta 11820 atagcttttt gatgacttct agcaagcctc gctaacctcg ccttaccccc cactattaac 11880 ctactgggag aactctctgt gctagtaacc acattctcct gatcaaatat cactctccta 11940 cttacaggac tcaacatact agtcacagcc ctatactccc tctacatatt taccacaaca 12000 caatgaggct cactcaccca ccacattaac aacataaaac cctcattcac acgagaaaac 12060 accctcatgt tcatacacct atcccccatt ctcctcctat ccctcaaccc cgacatcatc 12120 accgggtttt cctcttgtaa gtatagttta accaaaacat cagattgtga atctgacaac 12180 agaggcttac gaccccttat ttaccgagaa agctcacaag aactgctaac tcatgccccc 12240 atgtctaaca acatggcttt ctcaactttt aaaggataac agctatccat tggtcttagg 12300 ccccaaaaat tttggtgcaa ctccaaataa aagtaataac catgcacact actataacca 12360 ccctaaccct gacttcccta attcccccca tccttaccac cctcgttaac cctaacaaaa 12420 aaaactcata cccccattat gtaaaatcca ttgtcgcatc cacctttatt atcagtctct 12480 tccccacaac aatattcatg tgcctagacc aagaagttat tatctcgaac tgacactgag 12540 ccacaaccca aacaacccag ctctccctaa gcttcaaact agactacttc tccataatat 12600 tcatccctgt agcattgttc gttacatggt ccatcataga attctcactg tgatatataa 12660 actcagaccc aaacattaat cagttcttca aatatctact cattttccta attaccatgc 12720 taatcttagt taccgctaac aacctattcc aactgttcat cggctgagag ggcgtaggaa 12780 ttatatcctt cttgctcatc agttgatgat acgcccgagc agatgccaac acagcagcca 12840 ttcaagcaat cctatacaac cgtatcggcg atatcggttt catcctcgcc ttagcatgat 12900 ttatcctaca ctccaactca tgagacccac aacaaatagc ccttctaaac gctaatccaa 12960 gcctcacccc actactaggc ctcctcctag cagcagcagg caaatcagcc caattaggtc 13020 tccacccctg actcccctca gccatagaag gccccacccc agtctcagcc ctactccact 13080 caagcactat agttgtagca ggagtcttct tactcatccg cttccacccc ctagcagaaa 13140 atagcccact aatccaaact ctaacactat gcttaggcgc tatcaccact ctgttcgcag 13200 cagtctgcgc ccttacacaa aatgacatca aaaaaatcgt agccttctcc acttcaagtc 13260 aactaggact catagtagtt acaatcggca tcaaccaacc acacctagca ttcctgcaca 13320 tctgtaccca cgccttcttc aaagccatac tatttatgtg ctccgggtcc atcatccaca 13380 accttaacaa tgaacaagat attcgaaaaa taggaggact actcaaaacc atacctctca 13440 cttcaacctc cctcaccatt ggcagcctag cattagcagg aatacctttc ctcacaggtt 13500 tctattccaa agaccacatc atcgaaaccg caaacatatc atacacaaac gcctgagccc 13560 tatctattac tctcatcgct acctccctga caagcgccta tagcactcga ataattcttc 13620 tcaccctaac aggtcaacct cgcttcccta cccttactaa cattaacgaa aataacccca 13680 ccctactaaa ccccattaaa cgcctggcag ccggaagcct attcgcagga tttctcatta 13740 ctaacaacat ttcccccaca tcccccttcc aaacaacaat ccccctctac ctaaaactca 13800 cagccctcgc tgtcactttc ctaggacttc taacagccct agacctcaac tacctaacca 13860 acaaacttaa aataaaatcc ccactatgca cattttattt ctccaacata ctcggattct 13920 accctagcat cacacaccgc acaatcccct atctaggcct tcttacgagc caaaacctgc 13980 ccctactcct cctagaccta acctgactag aaaagctatt acctaaaaca atttcacagc 14040 accaaatctc cacctccatc atcacctcaa cccaaaaagg cataattaaa ctttacttcc 14100 tctctttctt cttcccactc atcctaaccc tactcctaat cacataacct attcccccga 14160 gcaatctcaa ttacaatata tacaccaaca aacaatgttc aaccagtaac tactactaat 14220 caacgcccat aatcatacaa agcccccgca ccaataggat cctcccgaat caaccctgac 14280 ccctctcctt cataaattat tcagcttcct acactattaa agtttaccac aaccaccacc 14340 ccatcatact ctttcaccca cagcaccaat cctacctcca tcgctaaccc cactaaaaca 14400 ctcaccaaga cctcaacccc tgacccccat gcctcaggat actcctcaat agccatcgct 14460 gtagtatatc caaagacaac catcattccc cctaaataaa ctaaaaaaac tattaaaccc 14520 atataacctc ccccaaaatt cagaataata acacacccga ccacaccgct aacaatcaat 14580 actaaacccc cataaatagg agaaggctta gaagaaaacc ccacaaaccc cattactaaa 14640 cccacactca acagaaacaa agcatacatc attattctcg cacggactac aaccacgacc 14700 aatgatatga aaaaccatcg ttgtatttca actacaagaa caccaatgac cccaatacgc 14760 aaaattaacc ccctaataaa attaattaac cactcattca tcgacctccc caccccatcc 14820 aacatctccg catgatgaaa cttcggctca ctccttggcg cctgcctgat cctccaaatc 14880 accacaggac tattcctagc catgcactac tcaccagacg cctcaaccgc cttttcatca 14940 atcgcccaca tcactcgaga cgtaaattat ggctgaatca tccgctacct tcacgccaat 15000 ggcgcctcaa tattctttat ctgcctcttc ctacacatcg ggcgaggcct atattacgga 15060 tcatttctct actcagaaac ctgaaacatc ggcattatcc tcctgcttgc aactatagca 15120 acagccttca taggctatgt cctcccgtga ggccaaatat cattctgagg ggccacagta 15180 attacaaact tactatccgc catcccatac attgggacag acctagttca atgaatctga 15240 ggaggctact cagtagacag tcccaccctc acacgattct ttacctttca cttcatcttg 15300 cccttcatta ttgcagccct agcagcactc cacctcctat tcttgcacga aacgggatca 15360 aacaaccccc taggaatcac ctcccattcc gataaaatca ccttccaccc ttactataca 15420 atcaaagacg ccctcggctt acttctcttc cttctctcct taataacatt aacactattc 15480 tcaccagacc tcctaggcga cccagacaat tataccctag ccaacccctt aaacacccct 15540 ccccacatca agcccgaatg atatttccta ttcgcctaca caattctccg atccgtccct 15600 aacaaactag gaggcgtcct tgccctatta ctatccatcc tcatcctagc aataatcccc 15660 atcctccata tatccaaaca acaaagcata atatttcgcc cactaagcca atcactttat 15720 tgactcctag ccgcagacct cctcattcta acctgaatcg gaggacaacc agtaagctac 15780 ccttttacca tcattggaca agtagcatcc gtactatact tcacaacaat cctaatccta 15840 ataccaacta tctccctaat tgaaaacaaa atactcaaat gggcctgtcc ttgtagtata 15900 aactaataca ccagtcttgt aaaccggaaa tgaaaacctc tttccaagga caaatcagag 15960 aaaaagtctt taactccacc attagcaccc aaagctaaga ttctaattta aactattctc 16020 tgttctttca tggggaagca gatttgggta ccacccaagt attgactcac ccatcaacaa 16080 ccgctatgta tttcgtacat tactgccagc caccatgaat attgtacagt accataaata 16140 cttgaccacc tgtagtacat aaaaacccaa tccacatcaa aaccctcccc ccatgcttac 16200 aagcaagtac agcaatcaac cctcaactgt catacatcaa ccgcaactcc aaagccaccc 16260 ctcagccact aggataccaa caaacctacc cacccttaac agtacatagc acataaagcc 16320 atttaccgta catagcacat tacagtcaaa tcccttctcg tccccatgga tgacccccct 16380 cagatagggg tcccttgacc accatcctcc gtgaaatcaa tatcccgcac aagagtgcta 16440 ctctcctcgc tccgggccca taacacttgg gggtagctaa agtgaactgt atccgacatc 16500 tggttcctac ttcagggcca taaagcctaa atagcccaca cgttcccctt aaataagaca 16560 tcacgatg 16568 // ID KC345792; SV 1; circular; genomic DNA; STD; HUM; 16566 BP. XX AC KC345792; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT6_185 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16566 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16566 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; c2966133f9c26157000586b42d92e05e. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16566 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT6_185" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="||Ani" FT /db_xref="taxon:9606" FT /haplogroup="L0d1" FT D-loop complement(join(16021..16566,1..574)) FT tRNA 575..645 FT /product="tRNA-Phe" FT rRNA 646..1599 FT /product="12S ribosomal RNA" FT tRNA 1600..1668 FT /product="tRNA-Val" FT rRNA 1669..3226 FT /product="16S ribosomal RNA" FT tRNA 3227..3301 FT /product="tRNA-Leu" FT gene 3304..4259 FT /gene="ND1" FT CDS 3304..4259 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4258..4259,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q4GRH9" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:Q4GRH9" FT /protein_id="AGD82251.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPTTISSIPPQT" FT tRNA 4260..4328 FT /product="tRNA-Ile" FT tRNA complement(4326..4397) FT /product="tRNA-Gln" FT tRNA 4399..4466 FT /product="tRNA-Met" FT gene 4467..5508 FT /gene="ND2" FT CDS 4467..5508 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5508,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82252.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5509..5573 FT /product="tRNA-Trp" FT tRNA complement(5584..5652) FT /product="tRNA-Ala" FT tRNA complement(5654..5726) FT /product="tRNA-Asn" FT tRNA complement(5758..5823) FT /product="tRNA-Cys" FT tRNA complement(5823..5888) FT /product="tRNA-Tyr" FT gene 5901..7442 FT /gene="COX1" FT CDS 5901..7442 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B1J9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B1J9" FT /protein_id="AGD82253.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7442..7513) FT /product="tRNA-Ser" FT tRNA 7515..7582 FT /product="tRNA-Asp" FT gene 7583..8266 FT /gene="COX2" FT CDS 7583..8266 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /protein_id="AGD82254.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8292..8361 FT /product="tRNA-Lys" FT gene 8363..8569 FT /gene="ATP8" FT CDS 8363..8569 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82255.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8524..9204 FT /gene="ATP6" FT CDS 8524..9204 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B185" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B185" FT /protein_id="AGD82256.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9204..9987 FT /gene="COX3" FT CDS 9204..9987 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9987,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82257.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9988..10055 FT /product="tRNA-Gly" FT gene 10056..10401 FT /gene="ND3" FT CDS 10056..10401 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10401,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82258.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWAE" FT tRNA 10402..10466 FT /product="tRNA-Arg" FT gene 10467..10763 FT /gene="ND4L" FT CDS 10467..10763 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AGD82259.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10757..12134 FT /gene="ND4" FT CDS 10757..12134 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12134,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:L7XL84" FT /db_xref="InterPro:IPR000260" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="InterPro:IPR010227" FT /db_xref="UniProtKB/TrEMBL:L7XL84" FT /protein_id="AGD82260.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSXSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12135..12203 FT /product="tRNA-His" FT tRNA 12204..12262 FT /product="tRNA-Ser" FT tRNA 12263..12333 FT /product="tRNA-Leu" FT gene 12334..14145 FT /gene="ND5" FT CDS 12334..14145 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q4EYP3" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q4EYP3" FT /protein_id="AGD82261.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHSLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPTSPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14146..14670) FT /gene="ND6" FT CDS complement(14146..14670) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82262.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14671..14739) FT /product="tRNA-Glu" FT gene 14744..15884 FT /gene="CYTB" FT CDS 14744..15884 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15884,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q6VJ80" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q6VJ80" FT /protein_id="AGD82263.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15885..15950 FT /product="tRNA-Thr" FT tRNA complement(15952..16020) FT /product="tRNA-Pro" XX SQ Sequence 16566 BP; 5124 A; 5174 C; 2170 G; 4096 T; 2 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcgaac atacctactn aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tatttttccc tcccactccc atactactaa 480 tctcatcaat acaaccccgc ccatcctacc cagcacacac accgctgcta accccatacc 540 ccgaaccaac caaaccccaa agacaccccc cacagtttat gtagcttacc tcctcaaagc 600 aatacactga aaatgtttag acgggctcac atcaccccat aaacaaatag gtttggtcct 660 agcctttcta ttagctctta gtaagattac acatgcaagc atccccgttc cagtgaattc 720 accctctaaa tcaccacgat caaaagggac aagcatcaag cacgcaacaa tgcagctcaa 780 aacgcttagc ctagccacac ccccacggga aacagcagtg ataaaccttt agcaataaac 840 gaaagtttaa ctaagctata ctaaccccag ggttggtcaa tttcgtgcca gccaccgcgg 900 tcacacgatt aacccaagtc aatagaagcc ggcgtaaaga gtgttttaga tcaccccctc 960 cccaataaag ctaaaactca cctgagttgt aaaaaactcc agttgacaca aaataaacta 1020 cgaaagtggc tttaacatat ctgaatacac aatagctaag acccaaactg ggattagata 1080 ccccactatg cttagcccta aacctcaaca gttaaatcaa caaaactgct cgccagaaca 1140 ctacgagcca cagcttaaaa ctcaaaggac ctggcggtgc ttcatatccc tctagaggag 1200 cctgttctgt aatcgataaa ccccgatcaa cctcaccacc tcttgctcag cctatatacc 1260 gccatcttca gcaaaccctg atgaaggcta caaagtaagc gcaagtaccc acgtaaagac 1320 gttaggtcaa ggtgtagccc atgaggtggc aagaaatggg ctacattttc taccccagaa 1380 aactacgata gcccttatga aacttaaggg tcgaaggtgg atttagcagt aaactaagag 1440 tagagtgctt agttgaacag ggccctgaag cgcgtacaca ccgcccgtca ccctcctcaa 1500 gtatacttca aaggacattt aactaaaacc cctacgcatt tatatagagg agacaagtcg 1560 taacatggta agtgtactgg aaagtgcact tggacgaacc agagtgtagc ttaacacaaa 1620 gcacccaact tacacttagg agatttcaac ttaacttgac cgctctgagc taaacctagc 1680 cccaaaccca ctccacctta ctaccagaca accttagcca aaccatttac ccaaataaag 1740 tataggcgat agaaattgaa acctggcgca atagatatag taccgcaagg gaaagatgaa 1800 aaattataac caagcataat atagcaagga ctaaccccta taccttctgc ataatgaatt 1860 aactagaaat aactttgcaa ggagagccaa agctaagacc cccgaaacca gacgagctac 1920 ctaagaacag ctaaaagagc acacccgtct atgtagcaaa atagtgggaa gatttatagg 1980 tagaggcgac aaacctaccg agcctggtga tagctggttg tccaagatag aatcttagtt 2040 caactttaaa tttgcccaca gaaccctcta aatccccttg taaatttaac tgttagtcca 2100 aagaggaaca gctctttgga cactaggaaa aaaccttgta gagagagtaa aaaatttaac 2160 acccatagta ggcctaaaag cagccaccaa ttaagaaagc gttcaagctc aacacccact 2220 acctaaaaaa tcccaaacat ataactgaac tcctcacacc caattggacc aatctatcac 2280 cctatagaag aactaatgtt agtataagta acatgaaaac attctcctcc gcataagcct 2340 gcgtcagatt aaaacactga actgacaatt aacagcccaa tatctacaat caaccaacaa 2400 gtcattatta ccctcactgt caacccaaca caggcatgct cataaggaaa ggttaaaaaa 2460 agtaaaagga actcggcaaa tcttaccccg cctgtttacc aaaaacatca cctctagcat 2520 caccagtatt agaggcaccg cctgcccagt gacacatgtt taacggccgc ggtaccctaa 2580 ccgtgcaaag gtagcataat cacttgttcc ttaaataggg acctgtatga atggctccac 2640 gagggttcag ctgtctctta cttttaacca gtgaaattga cctgcccgtg aagaggcggg 2700 cataacacag caagacgaga agaccctatg gagctttaat ttattaatgc aaacaatacc 2760 taacaaaccc acaggtccta aactaccaaa cctgcattaa aaatttcggt tggggcgacc 2820 tcggagcaga acccaacctc cgagcagtac atgctaagac ttcaccagtc aaagcgaact 2880 accatactca attgatccaa taacttgacc aacggaacaa gttaccctag ggataacagc 2940 gcaatcctat tctagagtcc atatcaacaa tagggtttac gacctcgatg ttggatcagg 3000 acatcccgat ggtgcagccg ctattaaagg ttcgtttgtt caacgattaa agtcctacgt 3060 gatctgagtt cagaccggag taatccaggt cggtttctat ctacttcaaa ttcctccctg 3120 tacgaaagga caagagaaat aaggcctact tcacaaagcg ccttcccccg taaatgatat 3180 catctcaact tagtattata cccacaccca cccaagaaca gggtttgtta agatggcaga 3240 gcccggtaat cgcataaaac ttaaaacttt acagtcagag gttcaattcc tcttcttaac 3300 aacataccca tggccaacct cctactcctc attgtaccca ttctaatcgc aatggcattc 3360 ctaatgctta ccgaacgaaa aattctaggc tatatacaac tacgcaaagg ccccaacgtt 3420 gtaggcccct acggactact acaacccttc gctgacgcca taaaactctt caccaaagag 3480 cccctaaaac ccgccacatc taccatcacc ctatacatca ccgccccgac cttagctctc 3540 accatcgctc ttctactatg aacccccctc cccataccca accccctggt taacctcaac 3600 ctaggcctcc tatttattct agccacctct agcctagccg tttactcaat cctctgatca 3660 gggtgagcat caaactcaaa ctacgccctg atcggcgcac tgcgagcagt agcccaaaca 3720 atctcatatg aagtcaccct agccatcatt ctgctatcaa cattactaat aagtggctcc 3780 tttaacctct ccacccttat cacaacacaa gaacacctct gattactcct gccatcatga 3840 cccttggcca taatatgatt tatctccaca ctagcagaga ccaaccgaac ccccttcgac 3900 cttgccgaag gggagtccga actagtctca ggcttcaaca tcgaatacgc cgcaggcccc 3960 ttcgccctat tcttcatagc cgaatacaca aacattatta taataaacac cctcaccact 4020 acaatcttcc taggaacaac atatgacgca ctctcccctg aactctacac aacatatttt 4080 gtcaccaaga ccctacttct gacctccctg ttcttatgaa ttcgaacagc atacccccga 4140 ttccgctacg accaactcat acacctccta tgaaaaaact tcctaccact cactctagca 4200 ttacttatat gatatgtctc catacccact acaatctcca gcattccccc tcaaacctaa 4260 gaaatatgtc tgataaaaga gttactttga tagagtaaat aataggagtt taaaccccct 4320 tatttctagg actatgagaa tcgaacccat ccctgagaat ccaaaattct ccgtgccacc 4380 tatcacaccc catcctaaag taaggtcagc taaataagct atcgggccca taccccgaaa 4440 atgttggtta tacccttccc gtactaatta atcccctggc ccaacccgtc atctactcta 4500 ccatctttgc aggcacactc atcacagcgc taagctcgca ctgatttttt acctgagtag 4560 gcctagaaat aaacatgcta gcttttattc cagttctaac caaaaaaata aaccctcgtt 4620 ccacagaagc tgccatcaag tatttcctca cgcaagcaac cgcatccata atccttctaa 4680 tagctatcct cttcaacaat atactctccg gacaatgaac cataaccaat actaccaatc 4740 aatactcatc attaataatc ataatggcta tagcaataaa actaggaata gccccctttc 4800 acttctgagt cccagaggtt acccaaggca cccctctgac atccggcctg cttcttctca 4860 catgacaaaa actagccccc atctcaatca tataccaaat ctctccctca ctaaacgtaa 4920 gccttctcct cactctctca atcttatcca tcatagcagg cagttgaggt ggattaaacc 4980 aaacccagct acgcaaaatc ttagcatact cctcaattac ccacatagga tgaataatag 5040 cagttctacc gtacaaccct aacataacca ttcttaattt aactatttat attatcctaa 5100 ctactaccgc attcctacta ctcaacttaa actccagcac cacgacccta ctactatctc 5160 gcacctgaaa caagctaaca tgactaacac ccttaattcc atccaccctc ctctccctag 5220 gaggcctgcc cccgctaacc ggctttttgc ccaaatgggc cattatcgaa gaattcacaa 5280 aaaacaatag cctcatcatc cccaccatca tagccaccat caccctcctt aacctctact 5340 tctacctacg cctaatctac tccacctcaa tcacactact ccccatatct aacaacgtaa 5400 aaataaaatg acagtttgaa catacaaaac ccaccccact cctccccaca ctcatcgccc 5460 ttaccacgct actcctacct atctcccctt ttatactaat aatcttatag aaatttaggt 5520 taaatacaga ccaagagcct tcaaagccct cagtaagttg caatacttaa tttctgtaac 5580 agctaaggac tgcaaaaccc cactctgcat caactgaacg caaatcagcc actttaatta 5640 agctaagccc ttactagacc aatgggactt aaacccacaa acacttagtt aacagctaag 5700 caccctaatc aactggcttc aatctacttc tcccgccgcc gggaaaaaag gcgggagaag 5760 ccccggcagg tttgaagctg cttcttcgaa tttgcaattc aatatgaaaa tcacctcgga 5820 gctggtaaaa agaggcctaa cccctgtctt tagatttaca gtccaatgct tcactcagcc 5880 attttacctc acccccactg atgttcgccg accgttgact attctctaca aaccacaaag 5940 acattggaac actataccta ttattcggcg catgagctgg agtcctaggc acagctctaa 6000 gcctccttat tcgagccgag ctgggccagc caggcaacct tctaggtaac gaccacatct 6060 acaacgttat cgtcacagcc catgcatttg taataatctt cttcatagta atacccatca 6120 taatcggagg ctttggcaac tgactagttc ccctaataat cggtgccccc gatatggcgt 6180 tcccccgcat aaacaacata agcttctgac tcttacctcc ctctctccta ctcctgctcg 6240 catctgctat agtggaggcc ggggcaggaa caggttgaac agtctaccct cccttagcag 6300 ggaactactc ccaccctgga gcctccgtag acctaaccat cttctcttta cacctagcag 6360 gtgtctcctc tatcttaggg gccatcaatt tcatcacaac aattatcaat ataaaacccc 6420 ctgccataac ccaataccaa acgcccctct tcgtctgatc cgtcctaatc acagcagtcc 6480 tacttctcct atctctccca gtcctagctg ctggcatcac tatactacta acagaccgca 6540 acctcaacac caccttcttc gaccccgccg gaggaggaga ccccattcta taccaacacc 6600 tattctgatt tttcggtcac cctgaagttt atattcttat cctaccaggc ttcggaataa 6660 tctcccatat tgtaacttac tactccggaa aaaaagaacc atttggatac ataggtatgg 6720 tctgagctat gatatcaatt ggcttcctag ggtttatcgt gtgagcacac catatattta 6780 cagtaggaat agacgtagac acacgagcat acttcacctc cgctaccata atcatcgcta 6840 tccccaccgg cgtcaaagta tttagctgac tcgccacact ccacggaagc aatatgaaat 6900 gatctgctgc agtgctctga gccctaggat tcatctttct tttcaccgta ggtggcctga 6960 ctggcattgt attagcaaac tcatcactag acatcgtact acacgacacg tactacgttg 7020 tagctcactt ccactatgtc ctatcaatag gagctgtatt tgccatcata ggaggcttca 7080 ttcactgatt tcccctattc tcaggctaca ccctagacca aacctacgcc aaaatccatt 7140 tcgctatcat attcatcggc gtaaatctaa ctttcttccc acaacacttt ctcggcctat 7200 ccggaatgcc ccgacgttac tcggactacc ccgatgcata caccacatga aatatcctat 7260 catctgtagg ctcattcatt tctctaacag cagtaatatt aataattttc atgatttgag 7320 aagccttcgc ttcgaagcga aaagtcctaa tagtagaaga accctccata aacctggagt 7380 gactatatgg atgcccccca ccctaccaca cattcgaaga acccgtatac ataaaatcta 7440 gacaaaaaag gaaggaatcg aaccccccaa agctggtttc aagccaaccc catggcctcc 7500 atgacttttt caaaaagata ttagaaaaac catttcataa ctttgtcaaa gttaaattat 7560 aggctaaatc ctatatatct taatggcaca tgcagcgcaa gtaggtctac aagacgctac 7620 ttcccctatc atagaagagc ttatcacctt tcatgatcac gccctcataa tcattttcct 7680 tatctgcttc ctagtcctgt atgccctttt cctaacactc acaacaaaac taactaatac 7740 taacatctca gacgctcagg aaatagaaac cgtctgaact atcctgcccg ccatcatcct 7800 agtcctcatc gccctcccat ccctacgcat cctttacata acagacgagg tcaacgatcc 7860 ctcccttacc atcaaatcaa ttggccacca atggtactga acctacgagt acaccgacta 7920 cggcggacta atcttcaact cctacatact tcccccatta ttcctagaac caggcgacct 7980 gcgactcctt gacgttgaca atcgagtagt actcccgatt gaagccccca ttcgtataat 8040 aattacatca caagacgtct tgcactcatg agctgtcccc acattaggct taaaaacaga 8100 tgcaattcca ggacgtctaa accaaaccac tttcaccgct acacgaccag gggtatacta 8160 cggtcaatgc tctgaaatct gtggagcaaa ccacagtttc atgcccatcg tcctagaatt 8220 aattccccta aaaatctttg aaataggacc cgtatttacc ctatagcacc ccctctaccc 8280 cctctagagc ccactgtaaa gctaacttag cattaacctt ttaagttaaa gattaagaga 8340 accaacacct ctttacagtg aaatgcccca actaaatact accgtatggc ccaccataat 8400 tacccccata ctccttacac tattcctcat cacccaacta aaaatattaa acacaaacta 8460 ccacttacct ccctcaccaa agcccataaa aataaaaaat tataacaaac cctgagaacc 8520 aaaatgaacg aaaatctgtt cgcttcattc attgccccca caatcctagg cctacccgcc 8580 gcagtactga tcattctatt tccccctcta ttgatcccca cctccaaata tctcatcaac 8640 aaccgactaa ttaccaccca acaatgacta atcaaactaa cctcaaaaca aatgatagcc 8700 atacacaaca ctaaaggacg aacctgatct cttatactag tatccttaat catttttatt 8760 gccacaacta acctcctcgg actcctgcct cactcattta caccaaccac ccaactatct 8820 ataaacctag ccatggccat ccccttatga gcgggcgcag tgattatagg ctttcgctct 8880 aagattaaaa atgccctagc ccacttctta ccacaaggca cacctacacc ccttatcccc 8940 atactagtta ttatcgaaac catcagccta ctcattcaac caatagccct ggccgtacgc 9000 ctaaccgcta acattactgc aggccaccta ctcatgcatc taattggaag cgccacccta 9060 gcaatatcaa ccattaacct tccctctaca cttatcatct tcacaattct aattctactg 9120 actatcctag aaatcgctgt cgccttgatc caagcctacg ttttcacact tctagtaagc 9180 ctctacctgc acgacaacac ataatgaccc accaatcaca tgcctatcat atagtaaaac 9240 ccagcccatg acccctaaca ggggccctct cagccctcct aatgacctcc ggcctagcca 9300 tgtgatttca cttccactcc ataacgctcc tcatactagg cctgctaacc aacacactaa 9360 ccatatacca atgatggcgc gatgtaacac gagaaagcac ataccaaggc caccacacac 9420 cacctgtcca aaaaggcctt cgatacggga taatcctatt tattacctca gaagtttttt 9480 tcttcgcagg atttttctga gccttttacc actccagcct agcccctacc ccccaactag 9540 gagggcactg gcccccaaca ggcatcaccc cgctaaatcc cctagaagtc ccactcctaa 9600 acacatccgt attactcgca tcaggagtat caatcacctg agctcaccat agtctaatag 9660 aaaacaaccg aaaccaaata attcaagcac tgcttattac aattttactg ggtctctatt 9720 ttaccctcct acaagcctca gagtacttcg aatctccctt caccatttcc gacggcatct 9780 acggctcaac attttttgta gccacaggct tccacggact tcacgtcatt attggctcaa 9840 ctttcctcac tatctgcttc atccgccaac taatatttca ctttacatcc aaacatcact 9900 ttggcttcga agccgccgcc tgatactggc attttgtaga tgtggtttga ctatttctgt 9960 atgtctccat ctattgatga gggtcttact cttttagtat aaatagtacc gttaacttcc 10020 aattaactag ttttgacaac attcaaaaaa gagtaataaa cttcgcctta attttaataa 10080 tcaacaccct cctagcctta ctactaataa ttattacatt ttgactacca caactcaacg 10140 gctacataga aaaatccacc ccttacgagt gcggcttcga ccctatatcc cccgcccgcg 10200 tccctttctc cataaaattc ttcttagtag ctattacctt cttattattt gatctagaaa 10260 ttgccctcct tttaccccta ccatgagccc tacaaacaac taacctgcca ctaatagtta 10320 tgtcatccct cttattaatc atcatcctag ccctaagtct ggcctatgag tgactacaaa 10380 aaggattaga ctgagccgaa ttggtatata gtttaaacaa aacgaatgat ttcgactcat 10440 taaattatga taatcatatc taccaaatgc ccctcattta cataaatatt atactagcat 10500 ttaccatctc acttctagga atactagtat atcgctcaca cctcatatcc tccctactat 10560 gcctagaagg aataatacta tcgctattca ttatagctac tctcataacc ctcaacaccc 10620 actccctctt agccaatatt gtgcctattg ccatactagt ttttgccgcc tgcgaagcag 10680 cggtaggcct agccctacta gtctcaatct ccaacacata tggcctagac tacgtacata 10740 acctaaacct actccaatgc taaaactaat cgtcccaaca attatattac taccactgac 10800 atgactctcc aaaaaacaca taatttgaat caacacaacc acccacagcc taattattag 10860 catcatcccc ctactatttt ttaaccaaat caacaacaac ctatttagct gctccccaac 10920 cttttcctcc gaccccctaa caacccccct cctaatacta actacctgac tcctacccct 10980 cacaatcatg gcaagccaac gccacttatc cagtgaacca ctatcacgaa aaaaactcta 11040 cctctctata ctaatctccc tacaaatctc cttaattata acattcacag ccacagaact 11100 aatcatattt tatatcttct tcgaaaccac acttatcccc accttggcta tcatcacccg 11160 atgaggcaac cagccagaac gcctgaacgc aggcacatac ttcctattct acaccctagt 11220 aggctccctt cccctactca tcgcactaat ttacactcac aacaccctag gctcactaaa 11280 cattctacta ctcactctca ctgcccaaga actatcaaac tcctgagcca acaacttaat 11340 atgactagct tacacaatag cttttatagt aaagatacct ctttacggac tccacttatg 11400 actccctaaa gcccatgtcg aagcccccat cgccgggtca atagtacttg ccgcagtact 11460 cttaaaacta ggcggctatg gtataatacg cctcacactc attctcaacc ccctgacaaa 11520 acacatagcc taccccttcc ttgtactatc cctatgaggc ataattataa caagctccat 11580 ctgcctacga caaacagacc taaaatcgct cattgcatac tcttcaatca gccacatagc 11640 cctcgtagta acagccattc tcatccaaac cccctgaagc ttcaccggcg cagtcattct 11700 cataatcgcc cacggactta catcctcatt actattctgc ctagcaaact caaactacga 11760 acgcactcac agtcgcatca taatcctctc tcaaggactt caaactctac tcccactaat 11820 agctttttga tgacttctag caagcctcgc taacctcgcc ttacccccca ctattaacct 11880 actgggagaa ctctctgtgc tagtaaccac attctcctgn tcaaatatca ctctcctact 11940 tacaggactc aacatactag tcacagccct atactccctc tacatattta ccacaacaca 12000 atgaggctca ctcacccacc acattaacaa cataaaaccc tcattcacac gagaaaacac 12060 cctcatgttc atacacctat cccccattct cctcctatcc ctcaaccccg acatcatcac 12120 cgggttttcc tcttgtaaat atagtttaac caaaacatca gattgtgaat ctgacaacag 12180 aggcttacga ccccttattt accgagaaag ctcacaagaa ctgctaactc acgcccccat 12240 gtctaacaac atggctttct caacttttaa aggataacag ctatccattg gtcttaggcc 12300 ccaaaaattt tggtgcaact ccaaataaaa gtaataacca tgcacactac tataaccacc 12360 ctaaccctga cttccctaat tccccccatc cttaccaccc tcgttaaccc taacaaaaaa 12420 aactcatacc cccattatgt aaaatccatt gtcgcatcca cctttattat cagtctcttc 12480 cccacaacaa tattcatgtg cctagaccaa gaagttatta tctcgaactg acactgagcc 12540 acaacccaaa caacccagct ctccctaagc ttcaaactag actacttctc cataatattc 12600 atccctgtag cattgttcgt tacatggtcc atcatagaat tctcactgtg atatataaac 12660 tcagacccaa acattaatca gttcttcaaa tatctactca ttttcctaat taccatgcta 12720 atcttagtta ccgctaacaa cctattccaa ctgttcatcg gctgagaggg cgtaggaatt 12780 atatccttct tgctcatcag ttgatgatac gcccgagcag atgccaacac agcagccatt 12840 caagcaatcc tatacaaccg tatcggcgat atcggtttca tcctcgcctt agcatgattt 12900 atcctacact ccaactcatg agacccacaa caaatagccc ttctaaacgc taatccaagc 12960 ctcaccccac tactaggcct cctcctagca gcagcaggca aatcagccca attaggtctc 13020 cacccctgac tcccctcagc catagaaggc cccaccccag tctcagccct actccactca 13080 agcactatag ttgtagcagg agtcttctta ctcatccgct tccactccct agcagaaaat 13140 agcccactaa tccaaactct aacactatgc ttaggcgcta tcaccactct gttcgcagca 13200 gtctgcgccc ttacacaaaa tgacatcaaa aaaatcgtag ccttctccac ttcaagtcaa 13260 ctaggactca tagtagttac aatcggcatc aaccaaccac acctagcatt cctgcacatc 13320 tgtacccacg ccttcttcaa agccatacta tttatgtgct ccgggtccat catccacaac 13380 cttaacaatg aacaagatat tcgaaaaata ggaggactac tcaaaaccat acctctcact 13440 tcaacctccc tcaccattgg cagcctagca ttagcaggaa tacctttcct cacaggtttc 13500 tattccaaag accacatcat cgaaaccgca aacatatcat acacaaacgc ctgagcccta 13560 tctattactc tcatcgctac ctccctgaca agcgcctata gcactcgaat aattcttctc 13620 accctaacag gtcaacctcg cttccctacc cttactaaca ttaacgaaaa taaccccacc 13680 ctactaaacc ccattaaacg cctggcagcc ggaagcctat tcgcaggatt tctcattact 13740 aacaacattt cccccacatc ccccttccaa acaacaatcc ccctctacct aaaactcaca 13800 gccctcgctg tcactttcct aggacttcta acagccctag acctcaacta cctaaccaac 13860 aaacttaaaa taaaatcccc actatgcaca ttttatttct ccaacatact cggattctac 13920 cctagcatca cacaccgcac aatcccctat ctaggccttc ttacgagcca aaacctgccc 13980 ctactcctcc tagacctaac ctgactagaa aagctattac ctaaaacaat ttcacagcac 14040 caaatctcca cctccatcat cacctcaacc caaaaaggca taattaaact ttacttcctc 14100 tctttcttct tcccactcat cctaacccta ctcctaatca cataacctat tcccccgagc 14160 aatctcaatt acaatatata caccaacaaa caatgttcaa ccagtaacta ctactaatca 14220 acgcccataa tcatacaaag cccccgcacc aataggatcc tcccgaatca accctgaccc 14280 ctctccttca taaattattc agcttcctac actattaaag tttaccacaa ccaccacccc 14340 atcatactct ttcacccaca gcaccaatcc tacctccatc gctaacccca ctaaaacact 14400 caccaagacc tcaacccctg acccccatgc ctcaggatac tcctcaatag ccatcgctgt 14460 agtatatcca aagacaacca tcattccccc taaataaatt aaaaaaacta ttaaacccat 14520 ataacctccc ccaaaattca gaataataac acacccgacc acaccgctaa caatcaatac 14580 taaaccccca taaataggag aaggcttaga agaaaacccc acaaacccca ttactaaacc 14640 cacactcaac agaaacaaag catacatcat tattctcgca cggactacaa ccacgaccaa 14700 tgatatgaaa aaccatcgtt gtatttcaac tacaagaaca ccaatgaccc caatacgcaa 14760 aattaacccc ctaataaaat taattaacca ctcattcatc gacctcccca ccccatccaa 14820 catctccgca tgatgaaact tcggctcact ccttggcgcc tgcctgatcc tccaaatcac 14880 cacaggacta ttcctagcca tgcactactc accagacgcc tcaaccgcct tttcatcaat 14940 cgcccacatc actcgagacg taaattatgg ctgaatcatc cgctaccttc acgccaatgg 15000 cgcctcaata ttctttatct gcctcttcct acacatcggg cgaggcctat attacggatc 15060 atttctctac tcagaaacct gaaacatcgg cattatcctc ctgcttgcaa ctatagcaac 15120 agccttcata ggctatgtcc tcccgtgagg ccaaatatca ttctgagggg ccacagtaat 15180 tacaaactta ctatccgcca tcccatacat tgggacagac ctagttcaat gaatctgagg 15240 aggctactca gtagacagtc ccaccctcac acgattcttt acctttcact tcatcttgcc 15300 cttcattatt gcagccctag cagcactcca cctcctattc ttgcacgaaa cgggatcaaa 15360 caacccccta ggaatcacct cccattccga taaaatcacc ttccaccctt actacacaat 15420 caaagacgcc ctcggcttac ttctcttcct tctctcctta ataacattaa cactattctc 15480 accagacctc ctaggcgacc cagacaatta taccctagcc aaccccttaa acacccctcc 15540 ccacatcaag cccgaatgat atttcctatt cgcctacaca attctccgat ccgtccctaa 15600 caaactagga ggcgtccttg ccctattact atccatcctc atcctagcaa taatccccat 15660 cctccatata tccaaacaac aaagcataat atttcgccca ctaagccaat cactttattg 15720 actcctagcc gcagacctcc tcattctaac ctgaatcgga ggacaaccag taagctaccc 15780 ttttaccatc attggacaag tagcatccgt actatacttc acaacaatcc taatcctaat 15840 accaactatc tccctaattg aaaacaaaat actcaaatgg gcctgtcctt gtagtataaa 15900 ctaatacacc agtcttgtaa accggaaatg aaaacctctt tccaagggca aatcagagaa 15960 aaagtcttta actccaccat tagcacccaa agctaagatt ctaatttaaa ctattctctg 16020 ttctttcatg gggaagcaga tttgggtacc acccaagtat tgactcaccc atcaacaacc 16080 gctatgtatt tcgtacatta ctgccagcca ccatgaatat tgtacggtac cataaatact 16140 tgaccacctg tagtacataa aaacccaatc cacatcaaaa ccctcccccc atgcttacaa 16200 gcaagtacag caatcaacct tcaactgtca tacatcaacc gcaactccaa agccacccct 16260 tacccactag gataccaaca aacctactca gccttaacag tacatagcac ataaagccat 16320 ttaccgtaca tagcacatta cagtcaaatc ccttctcgtc cccatggatg acccccctca 16380 gataggggtc ccttgaccac catcctccgt gaaatcaata tcccgcacaa gagtgctact 16440 ctcctcgctc cgggcccata acacttgggg gtagctaaag tgaattgtat ccgacatctg 16500 gttcctactt cagggtcata aagcctaaat agcccacacg ttccccttaa ataagacatc 16560 acgatg 16566 // ID KC345793; SV 1; circular; genomic DNA; STD; HUM; 16570 BP. XX AC KC345793; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT6_189 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16570 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16570 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; 7e106ff0f3cef643ef4bd955781daf42. DR Ensembl-Gn; ENSG00000198840; homo_sapiens. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Tr; ENST00000361227; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16570 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT6_189" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="||Ani" FT /db_xref="taxon:9606" FT /haplogroup="L0d1" FT D-loop complement(join(16025..16570,1..576)) FT tRNA 577..647 FT /product="tRNA-Phe" FT rRNA 648..1601 FT /product="12S ribosomal RNA" FT tRNA 1602..1670 FT /product="tRNA-Val" FT rRNA 1671..3229 FT /product="16S ribosomal RNA" FT tRNA 3230..3304 FT /product="tRNA-Leu" FT gene 3307..4262 FT /gene="ND1" FT CDS 3307..4262 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4261..4262,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q4GRH9" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:Q4GRH9" FT /protein_id="AGD82264.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPTTISSIPPQT" FT tRNA 4263..4331 FT /product="tRNA-Ile" FT tRNA complement(4329..4400) FT /product="tRNA-Gln" FT tRNA 4402..4469 FT /product="tRNA-Met" FT gene 4470..5511 FT /gene="ND2" FT CDS 4470..5511 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5511,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82265.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5512..5576 FT /product="tRNA-Trp" FT tRNA complement(5587..5655) FT /product="tRNA-Ala" FT tRNA complement(5657..5729) FT /product="tRNA-Asn" FT tRNA complement(5761..5826) FT /product="tRNA-Cys" FT tRNA complement(5826..5891) FT /product="tRNA-Tyr" FT gene 5905..7446 FT /gene="COX1" FT CDS 5905..7446 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:L7XIT0" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:L7XIT0" FT /protein_id="AGD82266.1" FT /translation="MFADRWLFSTXHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7446..7517) FT /product="tRNA-Ser" FT tRNA 7519..7586 FT /product="tRNA-Asp" FT gene 7587..8270 FT /gene="COX2" FT CDS 7587..8270 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /db_xref="GOA:Q9B1F9" FT /db_xref="InterPro:IPR001505" FT /db_xref="InterPro:IPR002429" FT /db_xref="InterPro:IPR008972" FT /db_xref="InterPro:IPR011759" FT /db_xref="InterPro:IPR014222" FT /db_xref="InterPro:IPR034210" FT /db_xref="InterPro:IPR036257" FT /db_xref="UniProtKB/TrEMBL:Q9B1F9" FT /protein_id="AGD82267.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIETPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8296..8365 FT /product="tRNA-Lys" FT gene 8367..8573 FT /gene="ATP8" FT CDS 8367..8573 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82268.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8528..9208 FT /gene="ATP6" FT CDS 8528..9208 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B185" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B185" FT /protein_id="AGD82269.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9208..9991 FT /gene="COX3" FT CDS 9208..9991 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9991,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82270.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9992..10059 FT /product="tRNA-Gly" FT gene 10060..10405 FT /gene="ND3" FT CDS 10060..10405 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10405,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXZ5" FT /db_xref="InterPro:IPR000440" FT /db_xref="InterPro:IPR038430" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ5" FT /protein_id="AGD82271.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWTE" FT tRNA 10406..10470 FT /product="tRNA-Arg" FT gene 10471..10767 FT /gene="ND4L" FT CDS 10471..10767 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:E2FR42" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:E2FR42" FT /protein_id="AGD82272.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVAISNTYGLDYVHNLNLLQC" FT gene 10761..12138 FT /gene="ND4" FT CDS 10761..12138 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12138,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82273.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12139..12207 FT /product="tRNA-His" FT tRNA 12208..12266 FT /product="tRNA-Ser" FT tRNA 12267..12337 FT /product="tRNA-Leu" FT gene 12338..14149 FT /gene="ND5" FT CDS 12338..14149 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q4F0F4" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q4F0F4" FT /protein_id="AGD82274.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPTSPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14150..14674) FT /gene="ND6" FT CDS complement(14150..14674) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82275.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14675..14743) FT /product="tRNA-Glu" FT gene 14748..15888 FT /gene="CYTB" FT CDS 14748..15888 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15888,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q15H14" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q15H14" FT /protein_id="AGD82276.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIITALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLLSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15889..15954 FT /product="tRNA-Thr" FT tRNA complement(15956..16024) FT /product="tRNA-Pro" XX SQ Sequence 16570 BP; 5134 A; 5185 C; 2160 G; 4088 T; 3 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcgaac atacctacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tattttcccc tcccactccc atactactaa 480 tctcatcaat acaaccccgc ccatcctacc cagcacacac acaccgctgc taaccccata 540 ccccgaacca accaaacccc aaagacaccc cccacagttt atgtagctta cctcctcaaa 600 gcaatacact gaaaatgttt agacgggctc acatcacccc ataaacaaat aggtttggtc 660 ctagcctttc tattagctct tagtaagatt acacatgcaa gcatccccgt tccagtgaat 720 tcaccctcta aatcaccacg atcaaaaggg acaagcatca agcacgcaac aatgcagctc 780 aaaacgctta gcctagccac acccccacgg gaaacagcag tgataaacct ttagcaataa 840 acgaaagttt aactaagcta tactaacccc agggttggtc aatttcgtgc cagccaccgc 900 ggtcacacga ttaacccaag tcaatagaag ccggcgtaaa gagtgtttta gatcaccccc 960 tccccaataa agctaaaact cacctgagtt gtaaaaaact ccagttgaca caaaataaac 1020 tacgaaagtg gctttaacat atctgaatac acaatagcta agacccaaac tgggattaga 1080 taccccacta tgcttagccc taaacctcaa cagttaaatc aacaaaactg ctcgccagaa 1140 cactacgagc cacagcttaa aactcaaagg acctggcggt gcttcatatc cctctagagg 1200 agcctgttct ntaatcgata aaccccnatc aacctcacca cctcttgctc agcctatata 1260 ccgccatctt cagcaaaccc tgatgaaggc tacaaagtaa gcgcaagtac ccacgtaaag 1320 acgttaggtc aaggtgtagc ccatgaggtg gcaagaaatg ggctacattt tctaccccag 1380 aaaactacga tagcccttat gaaacttaag ggtcgaaggt ggatttagca gtaaactaag 1440 agtagagtgc ttagttgaac agggccctga agcgcgtaca caccgcccgt caccctcctc 1500 aagtatactt caaaggacat ttaactaaaa cccctacgca tttatataga ggagacaagt 1560 cgtaacatgg taagtgtact ggaaagtgca cttggacgaa ccagagtgta gcttaacaca 1620 aagcacccaa cttacactta ggagatttca acttaacttg accgctctga gctaaaccta 1680 gccccaaacc cactccacct tactaccaga caaccttagc caaaccattt acccaaataa 1740 agtataggcg atagaaattg aaacctggcg caatagatat agtaccgcaa gggaaagatg 1800 aaaaattata accaagcata atatagcaag gactaacccc tataccttct gcataatgaa 1860 ttaactagaa ataactttgc aaggagagcc aaagctaaga cccccgaaac cagacgagct 1920 acctaagaac agctaaaaga gcacacccgt ctatgtagca aaatagtggg aagatttata 1980 ggtagaggcg acaaacctac cgagcctggt gatagctggt tgtccaagat agaatcttag 2040 ttcaacttta aatttgccca cagaaccctc taaatcccct tgtaaattta actgttagtc 2100 caaagaggaa cagctctttg gacactagga aaaaaccttg tagagagagt aaaaaattta 2160 acacccatag taggcctaaa agcagccacc aattaagaaa gcgttcaagc tcaacaccca 2220 ctacctaaaa aatcccaaac atataactga actcctcaca cccaattgga ccaatctatc 2280 accctataga agaactaatg ttagtataag taacatgaaa acattctcct ccgcataagc 2340 ctgcgtcaga ttaaaacact gaactgacaa ttaacagccc aatatctaca atcaaccaac 2400 aagtcattat taccctcact gtcaacccaa cacaggcatg ctcataagga aaggttaaaa 2460 aaagtaaaag gaactcggca aatccttacc ccgcctgttt accaaaaaca tcacctctag 2520 catcaccagt attagaggca ccgcctgccc agtgacacat gtttaacggc cgcggtaccc 2580 taaccgtgca aaggtagcat aatcacttgt tccttaaata gggacctgta tgaatggctc 2640 cacgagggtt cagctgtctc ttacttttaa ccagtgaaat tgacctgccc gtgaagaggc 2700 gggcataaca cagcaagacg agaagaccct atggagcttt aatttattaa tgcaaacaat 2760 acctaacaaa cccacaggtc ctaaactacc aaacctgcat taaaaatttc ggttggggcg 2820 acctcggagc agaacccaac ctccgagcag tacatgctaa gacttcacca gtcaaagcga 2880 actaccatac tcaattgatc caataacttg accaacggaa caagttaccc tagggataac 2940 agcgcaatcc tattctagag tccatatcaa caatagggtt tacgacctcg atgttggatc 3000 aggacatccc gatggtgcag ccgctattaa aggttcgttt gttcaacgat taaagtccta 3060 cgtgatctga gttcagaccg gagtaatcca ggtcggtttc tatctacttc aaattcctcc 3120 ctgtacgaaa ggacaagaga aataaggcct acttcacaaa gcgccttccc ccgtaaatga 3180 tatcatctca acttagtatt atacccacac ccacccaaga acagggtttg ttaagatggc 3240 agagcccggt aatcgcataa aacttaaaac tttacagtca gaggttcaat tcctcttctt 3300 aacaacatac ccatggccaa cctcctactc ctcattgtac ccattctaat cgcaatggca 3360 ttcctaatgc ttaccgaacg aaaaattcta ggctatatac aactacgcaa aggccccaac 3420 gttgtaggcc cctacggact actacaaccc ttcgctgacg ccataaaact cttcaccaaa 3480 gagcccctaa aacccgccac atctaccatc accctataca tcaccgcccc aaccttagct 3540 ctcaccatcg ctcttctact atgaaccccc ctccccatac ccaaccccct ggttaacctc 3600 aacctaggcc tcctattcat tctagccacc tctagcctag ccgtttactc aatcctctga 3660 tcagggtgag catcaaactc aaactacgcc ctgatcggcg cactgcgagc agtagcccaa 3720 acaatctcat atgaagtcac cctagccatc attctgctat caacattact aataagtggc 3780 tcctttaacc tctccaccct tatcacaaca caagaacacc tctgattact cctgccatca 3840 tgacccttgg ccataatatg atttatctcc acactagcag agaccaaccg aacccccttc 3900 gaccttgccg aaggggagtc cgaactagtc tcaggcttca acatcgaata cgccgcaggc 3960 cccttcgccc tattcttcat agccgaatac acaaacatta ttataataaa caccctcacc 4020 actacaatct tcctaggaac aacatatgac gcactctccc ctgaactcta cacaacatat 4080 tttgtcacca agaccctact tctgacctcc ctgttcttat gaattcgaac agcatacccc 4140 cgattccgct acgaccaact catacacctc ctatgaaaaa acttcctacc actcacccta 4200 gcattactta tatgatatgt ctccataccc actacaatct ccagcattcc ccctcaaacc 4260 taagaaatat gtctgataaa agagttactt tgatagagta aataatagga gtttaaaccc 4320 ccttatttct aggactatga gaatcgaacc catccctgag aatccaaaat tctccgtgcc 4380 acctatcaca ccccatccta aagtaaggtc agctaaataa gctatcgggc ccataccccg 4440 aaaatgttgg ttataccctt cccgtactaa ttaatcccct ggcccaaccc gtcatctact 4500 ctaccatctt tgcaggcaca ctcatcacag cgctaagctc gcactgattt tttacctgag 4560 tcggcctaga aataaacatg ctagctttta ttccagttct aaccaaaaaa ataaaccctc 4620 gttccacaga agctgccatc aagtatttcc tcacgcaagc aaccgcatcc ataatccttc 4680 taatagctat cctcttcaac aatatactct ccggacaatg aaccataacc aatactacca 4740 atcaatactc atcattaata atcataatgg ctatagcaat aaaactagga atagccccct 4800 ttcacttctg agtcccagag gttacccaag gcacccctct gacatccggc ctgcttcttc 4860 tcacatgaca aaaactagcc cccatctcaa tcatatacca aatctctccc tcactaaacg 4920 taagccttct cctcactctc tcaatcttat ccatcatagc aggcagttga ggtggattaa 4980 accaaaccca gctacgcaaa atcttagcat actcctcaat tacccacata ggatgaataa 5040 tagcagttct accgtacaac cctaacataa ccattcttaa tttaactatt tatattatcc 5100 taactactac cgcattccta ctactcaact taaactccag caccacgacc ctactactat 5160 ctcgcacctg aaacaagcta acatgactaa cacccttaat tccatccacc ctcctctccc 5220 taggaggcct gcccccgcta accggctttt tgcccaaatg ggccattatc gaagaattca 5280 caaaaaacaa tagcctcatc atccccacca tcatagccac catcaccctc cttaacctct 5340 acttctacct acgcctaatc tactccacct caatcacact actccccata tctaacaacg 5400 taaaaataaa atgacagttt gaacatacaa aacccacccc actcctcccc acactcatcg 5460 cccttaccac gctactccta cctatctccc cttttatact aataatctta tagaaattta 5520 ggttaaatac agaccaagag ccttcaaagc cctcagtaag ttgcaatact taatttctgt 5580 aacagctaag gactgcaaaa ccccactctg catcaactga acgcaaatca gccactttaa 5640 ttaagctaag cccttactag accaatggga cttaaaccca caaacactta gttaacagct 5700 aagcacccta atcaactggc ttcaatctac ttctcccgcc gccgggaaaa aaggcgggag 5760 aagccccggc aggtttgaag ctgcttcttc gaatttgcaa ttcaatatga aaatcacctc 5820 ggagctggta aaaagaggcc taacccctgt ctttagattt acagtccaat gcttcactca 5880 gccattttac ctcacccccc actgatgttc gccgaccgtt gactattctc tacaaancac 5940 aaagacattg gaacactata cctattattc ggcgcatgag ctggagtcct aggcacagct 6000 ctaagcctcc ttattcgagc cgagctgggc cagccaggca accttctagg taacgaccac 6060 atctacaacg ttatcgtcac agcccatgca tttgtaataa tcttcttcat agtaataccc 6120 atcataatcg gaggctttgg caactgacta gttcccctaa taatcggtgc ccccgatatg 6180 gcgttccccc gcataaacaa cataagcttc tgactcttac ctccctctct cctactcctg 6240 ctcgcatctg ctatagtgga ggccggggca ggaacaggtt gaacagtcta ccctccctta 6300 gcagggaact actcccaccc tggagcctcc gtagacctaa ccatcttctc cttacaccta 6360 gcaggtgtct cctctatctt aggggccatc aatttcatca caacaattat caatataaaa 6420 ccccctgcca taacccaata ccaaacgccc ctcttcgtct gatccgtcct aatcacagca 6480 gtcctacttc tcctatctct cccagtccta gctgctggca tcactatact actaacagac 6540 cgcaacctca acaccacctt cttcgacccc gccggaggag gagaccccat tctataccaa 6600 cacctattct gatttttcgg tcaccctgaa gtttatattc ttatcctacc aggcttcgga 6660 ataatctccc atattgtaac ttactactcc ggaaaaaaag aaccatttgg atacataggt 6720 atggtctgag ctatgatatc aattggcttc ctagggttta tcgtgtgagc acaccatata 6780 tttacagtag gaatagacgt agacacacga gcatacttca cctccgctac cataatcatc 6840 gctatcccca ccggcgtcaa agtatttagc tgactcgcca cactccacgg aagcaatatg 6900 aaatgatctg ctgcagtgct ctgagcccta ggattcatct ttcttttcac cgtaggtggc 6960 ctgactggca ttgtattagc aaactcatca ctagacatcg tactacacga cacgtactac 7020 gttgtagctc acttccacta tgtcctatca ataggagctg tatttgccat cataggaggc 7080 ttcattcact gatttcccct attctcaggc tacaccctag accaaaccta cgccaaaatc 7140 catttcgcta tcatattcat cggcgtaaat ctaactttct tcccacaaca ctttctcggc 7200 ctatccggaa tgccccgacg ttactcggac taccccgatg catacaccac atgaaatatc 7260 ctatcatctg taggctcatt catttctcta acagcagtaa tattaataat tttcatgatt 7320 tgagaagcct tcgcttcgaa gcgaaaagtc ctaatagtag aagaaccctc cataaacctg 7380 gagtgactat atggatgccc cccaccctac cacacattcg aagaacccgt atacataaaa 7440 tctagacaaa aaaggaagga atcgaacccc ccaaagctgg tttcaagcca accccatggc 7500 ctccatgact ttttcaaaaa gatattagaa aaaccatttc ataactttgt caaagttaaa 7560 ttataggcta aatcctatat atcttaatgg cacatgcagc gcaagtaggt ctacaagacg 7620 ctacttcccc tatcatagaa gagcttatca cctttcatga tcacgccctc ataatcattt 7680 tccttatctg cttcctagtc ctgtatgccc ttttcctaac actcacaaca aaactaacta 7740 atactaacat ctcagacgct caggaaatag aaaccgtctg aactatcctg cccgccatca 7800 tcctagtcct catcgccctc ccatccctac gcatccttta cataacagac gaggtcaacg 7860 atccctccct taccatcaaa tcaattggcc accaatggta ctgaacctac gagtacaccg 7920 actacggcgg actaatcttc aactcctaca tacttccccc attattccta gaaccaggcg 7980 acctgcgact ccttgacgtt gacaatcgag tagtactccc gattgaaacc cccattcgta 8040 taataattac atcacaagac gtcttgcact catgagctgt ccccacatta ggcttaaaaa 8100 cagatgcaat tccaggacgt ctaaaccaaa ccactttcac cgctacacga ccaggggtat 8160 actacggtca atgctctgaa atctgtggag caaaccacag tttcatgccc atcgtcctag 8220 aattaattcc cctaaaaatc tttgaaatag gacccgtatt taccctatag caccccctct 8280 accccctcta gagcccactg taaagctaac ttagcattaa ccttttaagt taaagattaa 8340 gagaaccaac acctctttac agtgaaatgc cccaactaaa tactaccgta tggcccacca 8400 taattacccc catactcctt acactattcc tcatcaccca actaaaaata ttaaacacaa 8460 actaccactt acctccctca ccaaagccca taaaaataaa aaattataac aaaccctgag 8520 aaccaaaatg aacgaaaatc tgttcgcttc attcattgcc cccacaatcc taggcctacc 8580 cgccgcagta ctgatcattc tatttccccc tctattgatc cccacctcca aatatctcat 8640 caacaaccga ctaattacca cccaacaatg actaatcaaa ctaacctcaa aacaaatgat 8700 agccatacac aacactaaag gacgaacctg atctcttata ctagtatcct taatcatttt 8760 tattgccaca actaacctcc tcggactcct gcctcactca tttacaccaa ccacccaact 8820 atctataaac ctagccatgg ccatcccctt atgagcgggc gcagtgatta taggctttcg 8880 ctctaagatt aaaaatgccc tagcccactt cttaccacaa ggcacaccta caccccttat 8940 ccccatacta gttattatcg aaaccatcag cctactcatt caaccaatag ccctggccgt 9000 acgcctaacc gctaacatta ctgcaggcca cctactcatg catctaattg gaagcgccac 9060 cctagcaata tcaaccatta accttccctc tacacttatc atcttcacaa ttctaattct 9120 actgactatc ctagaaatcg ctgtcgcctt aatccaagcc tacgttttca cacttctagt 9180 aagcctctac ctgcacgaca acacataatg acccaccaat cacatgccta tcatatagta 9240 aaacccagcc catgacccct aacaggggcc ctctcagccc tcctaatgac ctccggccta 9300 gccatgtgat ttcacttcca ctccataacg ctcctcatac taggcctgct aaccaacaca 9360 ctaaccatat accaatgatg gcgcgatgta acacgagaaa gcacatacca aggccaccac 9420 acaccacctg tccaaaaagg ccttcgatac gggataatcc tatttattac ctcagaagtt 9480 tttttcttcg caggattttt ctgagccttt taccactcca gcctagcccc taccccccaa 9540 ctaggagggc actggccccc aacaggcatc accccgctaa atcccctaga agtcccactc 9600 ctaaacacat ccgtattact cgcatcagga gtatcaatca cctgagctca ccatagtcta 9660 atagaaaaca accgaaacca aataattcaa gcactgctta ttacaatttt actgggtctc 9720 tattttaccc tcctacaagc ctcagagtac ttcgaatctc ccttcaccat ttccgacggc 9780 atctacggct caacattttt tgtagccaca ggcttccacg gacttcacgt cattattggc 9840 tcaactttcc tcactatctg cttcatccgc caactaatat ttcactttac atccaaacat 9900 cactttggct tcgaagccgc cgcctgatac tggcattttg tagatgtggt ttgactattt 9960 ctgtatgtct ccatctattg atgagggtct tactctttta gtataaatag taccgttaac 10020 ttccaattaa ctagttttga caacattcaa aaaagagtaa taaacttcgc cttaatttta 10080 ataatcaaca ccctcctagc cttactacta ataattatta cattttgact accacaactc 10140 aacggctaca tagaaaaatc caccccttac gagtgcggct tcgaccctat atcccccgcc 10200 cgcgtccctt tctccataaa attcttctta gtagctatta ccttcttatt atttgatcta 10260 gaaattgccc tccttttacc cctaccatga gccctacaaa caactaacct gccactaata 10320 gttatgtcat ccctcttatt aatcatcatc ctagccctaa gtctggccta tgagtgacta 10380 caaaaaggat tagactgaac cgaattggta tatagtttaa acaaaacgaa tgatttcgac 10440 tcattaaatt atgataatca tatttaccaa atgcccctca tttacataaa tattatacta 10500 gcatttacca tctcacttct aggaatacta gtatatcgct cacacctcat atcctcccta 10560 ctatgcctag aaggaataat actatcgcta ttcattatag ctactctcat aaccctcaac 10620 acccactccc tcttagccaa tattgtgcct attgccatac tagtttttgc cgcctgcgaa 10680 gcagcggtag gcctagccct actagtcgca atctccaaca catatggcct agactacgta 10740 cataacctaa acctactcca atgctaaaac taatcgtccc aacaattata ttactaccac 10800 tgacatgact ctccaaaaaa cacataattt gaatcaacac aaccacccac agcctaatta 10860 ttagcatcat ccccctacta ttttttaacc aaatcaacaa caacctattt agctgctccc 10920 caaccttttc ctccgacccc ctaacaaccc ccctcctaat actaactacc tgactcctac 10980 ccctcacaat catggcaagc caacgccact tatccagtga accactatca cgaaaaaaac 11040 tctacctctc tatactaatc tccctacaaa tctccttaat tataacattc acagccacag 11100 aactaatcat attttatatc ttcttcgaaa ccacacttat ccccaccttg gctatcatca 11160 cccgatgagg caaccagcca gaacgcctga acgcaggcac atacttccta ttctacaccc 11220 tagtaggctc ccttccccta ctcatcgcac taatttacac tcacaacacc ctaggctcac 11280 taaacattct actactcact ctcactgccc aagaactatc aaactcctga gccaacaact 11340 taatatgact agcttacaca atagctttta tagtaaagat acctctttac ggactccact 11400 tatgactccc taaagcccat gtcgaagccc ccatcgctgg gtcaatagta cttgccgcag 11460 tactcttaaa actaggcggc tatggtataa tacgcctcac actcattctc aaccccctga 11520 caaaacacat agcctacccc ttccttgtac tatccctatg aggcataatt ataacaagct 11580 ccatctgcct acgacaaaca gacctaaaat cgctcattgc atactcttca atcagccaca 11640 tagccctcgt agtaacagcc attctcatcc aaaccccctg aagcttcacc ggcgcagtca 11700 ttctcataat cgcccacgga cttacatcct cattactatt ctgcctagca aactcaaact 11760 acgaacgcac tcacagtcgc atcataatcc tctctcaagg acttcaaact ctactcccac 11820 taatagcttt ttgatgactt ctagcaagcc tcgctaacct cgccttaccc cccactatta 11880 acctactggg agaactctct gtgctagtaa ccacattctc ctgatcaaat atcactctcc 11940 tacttacagg actcaacata ctagtcacag ccctatactc cctctacata tttaccacaa 12000 cacaatgagg ctcactcacc caccacatta acaacataaa accctcattc acacgagaaa 12060 acaccctcat gttcatacac ctatccccca ttctcctcct atccctcaac cccgacatca 12120 tcaccgggtt ttcctcttgt aaatatagtt taaccaaaac atcagattgt gaatctgaca 12180 acagaggctt acgacccctt atttaccgag aaagctcaca agaactgcta actcatgccc 12240 ccatgtctaa caacatggct ttctcaactt ttaaaggata acagctatcc attggtctta 12300 ggccccaaaa attttggtgc aactccaaat aaaagtaata accatgcaca ctactataac 12360 caccctaacc ctgacttccc taattccccc catccttacc accctcgtta accctaacaa 12420 aaaaaactca tacccccatt atgtaaaatc cattgtcgca tccaccttta ttatcagtct 12480 cttccccaca acaatattca tgtgcctaga ccaagaagtt attatctcga actgacactg 12540 agccacaacc caaacaaccc agctctccct aagcttcaaa ctagactact tctccataat 12600 attcatccct gtagcattgt tcgttacatg gtccatcata gaattctcac tgtgatatat 12660 aaactcagac ccaaacatta atcagttctt caaatatcta ctcattttcc taattaccat 12720 gctaatctta gttaccgcta acaacctatt ccaactgttc atcggctgag agggcgtagg 12780 aattatatcc ttcttgctca tcagttgatg atacgcccga gcagatgcca acacagcagc 12840 cattcaagca atcctataca accgtatcgg cgatatcggt ttcatcctcg ccttagcatg 12900 atttatccta cactccaact catgagaccc acaacaaata gcccttctaa acgctaatcc 12960 aagcctcacc ccactactag gcctcctcct agcagcagca ggcaaatcag cccaattagg 13020 tctccacccc tgactcccct cagccataga aggccccacc ccagtctcag ccctactcca 13080 ctcaagcact atagttgtag caggagtctt cttactcatc cgcttccacc ccctagcaga 13140 aaatagccca ctaatccaaa ctctaacact atgcttaggc gctatcacca ctctgttcgc 13200 agcagtctgc gcccttacac aaaatgacat caaaaaaatc gtagccttct ccacttcaag 13260 tcaactagga ctcatagtag ttacaatcgg catcaaccaa ccacacctag cattcctgca 13320 catctgtacc cacgccttct tcaaagccat actatttatg tgctccgggt ccatcatcca 13380 caaccttaac aatgaacaag atattcgaaa aataggagga ctactcaaaa ccatacctct 13440 cacttcaacc tccctcacca ttggcagcct agcattagca ggaatacctt tcctcacagg 13500 tttctattcc aaagaccaca tcatcgaaac cgcaaacata tcatacacaa acgcctgagc 13560 cctatctatt actctcatcg ctacctccct gacaagcgcc tatagcactc gaataattct 13620 tctcacccta acaggtcaac ctcgcttccc tacccttact aacattaacg aaaataaccc 13680 caccctacta aaccccatta aacgcctggc agccggaagc ctattcgcag gatttctcat 13740 tactaacaac atttccccca catccccctt ccaaacaaca atccccctct acctaaaact 13800 cacagccctc gctgtcactt tcctaggact tctaacagcc ctagacctca actacctaac 13860 caacaaactt aaaataaaat ccccactatg cacattttat ttctccaaca tactcggatt 13920 ctaccctagc atcacacacc gcacaatccc ctatctaggc cttcttacga gccaaaacct 13980 gcccctactc ctcctagacc taacctgact agaaaagcta ttacctaaaa caatttcaca 14040 gcaccaaatc tccacctcca tcatcacctc aacccaaaaa ggcataatta aactttactt 14100 cctctctttc ttcttcccac tcatcctaac cctactccta atcacataac ctattccccc 14160 gagcaatctc aattacaata tatacaccaa caaacaatgt tcaaccagta actactacta 14220 atcaacgccc ataatcatac aaagcccccg caccaatagg atcctcccga atcaaccctg 14280 acccctctcc ttcataaatt attcagcttc ctacactatt aaagtttacc acaaccacca 14340 ccccatcata ctctttcacc cacagcacca atcctacctc catcgctaac cccactaaaa 14400 cactcaccaa gacctcaacc cctgaccccc atgcctcagg atactcctca atagccatcg 14460 ctgtagtata tccaaagaca accatcattc cccctaaata aattaaaaaa actattaaac 14520 ccatataacc tcccccaaaa ttcagaataa taacacaccc gaccacaccg ctaacaatca 14580 atactaaacc cccataaata ggagaaggct tagaagaaaa ccccacaaac cccattacta 14640 aacccacact caacagaaac aaagcataca tcattattct cgcacggact acaaccacga 14700 ccaatgatat gaaaaaccat cgttgtattt caactacaag aacaccaatg accccaatac 14760 gcaaaattaa ccccctaata aaattaatta accactcatt catcgacctc cccaccccat 14820 ccaacatctc cgcatgatga aacttcggct cactccttgg cgcctgcctg atcctccaaa 14880 tcaccacagg actattccta gccatgcact actcaccaga cgcctcaacc gccttttcat 14940 caatcgccca catcactcga gacgtaaatt atggctgaat catccgctac cttcacgcca 15000 atggcgcctc aatattcttt atctgcctct tcctacacat cgggcgaggc ctatattacg 15060 gatcatttct ctactcagaa acctgaaaca tcggcattat cctcctgctt gcaactatag 15120 caacagcctt cataggctat gtcctcccgt gaggccaaat atcattctga ggggccacag 15180 taattacaaa cttactatcc gccatcccat acattggaac agacctagtt caatgaatct 15240 gaggaggcta ctcagtagac agtcccaccc tcacacgatt ctttaccttt cacttcatct 15300 tgcccttcat tattacagcc ctagcagcac tccacctcct attcttgcac gaaacgggat 15360 caaacaaccc cctaggaatc acctcccatt ccgataaaat caccttccac ccttactaca 15420 caatcaaaga cgccctcggc ttacttctct tccttctctc cttaataaca ttaacactac 15480 tctcaccaga cctcctaggc gacccagaca attataccct agccaacccc ttaaacaccc 15540 ctccccacat caagcccgaa tgatatttcc tattcgccta cacaattctc cgatccgtcc 15600 ctaacaaact aggaggcgtc cttgccctat tactatccat cctcatccta gcaataatcc 15660 ccatcctcca tatatccaaa caacaaagca taatatttcg cccactaagc caatcacttt 15720 attgactcct agccgcagac ctcctcattc taacctgaat cggaggacaa ccagtaagct 15780 acccttttac catcattgga caagtagcat ccgtactata cttcacaaca atcctaatcc 15840 taataccaac tatctcccta attgaaaaca aaatactcaa atgggcctgt ccttgtagta 15900 taaactaata caccagtctt gtaaaccgga aatgaaaacc tctttccaag gacaaatcag 15960 agaaaaagtc tttaactcca ccattagcac ccaaagctaa gattctaatt taaactattc 16020 tctgttcttt catggggaag cagatttggg taccacccaa gtattgactc acccatcaac 16080 aaccgctatg tatttcgtac attactgcca gccaccatga atattgtaca gtaccataaa 16140 tacttgacca cctgtagtac ataaaaaccc aatccacatt aaaaccctcc ccccatgctt 16200 acaagcaagt acagcaatca accttcaact gtcacacatc aaccgcaact ccaaagccac 16260 ccctcaccca ctaggatacc aacaaaccta cccaccctta acagtacata gcacataaag 16320 ccatttaccg tacatagcac attacagtca aatcccttct cgtccccatg gatgaccccc 16380 ctcagatagg ggtcccttga ccaccatcct ccgtgaaatc aatatcccgc acaagagtgc 16440 tactctcctc gctccgggcc cataacactt gggggtagct aaagtgaact gtatccgaca 16500 tctggttcct acttcagggc cataaagcct aaatagccca cacgttcccc ttaaataaga 16560 catcacgatg 16570 // ID KC345794; SV 1; circular; genomic DNA; STD; HUM; 16566 BP. XX AC KC345794; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT6_154 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16566 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16566 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; 316b8bd6e42ab8254ece56b4d9e49209. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16566 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT6_154" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="||Ani" FT /db_xref="taxon:9606" FT /haplogroup="L0k" FT D-loop complement(join(16021..16566,1..574)) FT tRNA 575..645 FT /product="tRNA-Phe" FT rRNA 646..1599 FT /product="12S ribosomal RNA" FT tRNA 1600..1668 FT /product="tRNA-Val" FT rRNA 1669..3226 FT /product="16S ribosomal RNA" FT tRNA 3227..3301 FT /product="tRNA-Leu" FT gene 3304..4259 FT /gene="ND1" FT CDS 3304..4259 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4258..4259,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82277.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPITISSIPPQT" FT tRNA 4260..4328 FT /product="tRNA-Ile" FT tRNA complement(4326..4397) FT /product="tRNA-Gln" FT tRNA 4399..4466 FT /product="tRNA-Met" FT gene 4467..5508 FT /gene="ND2" FT CDS 4467..5508 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5508,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82278.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5509..5573 FT /product="tRNA-Trp" FT tRNA complement(5584..5652) FT /product="tRNA-Ala" FT tRNA complement(5654..5726) FT /product="tRNA-Asn" FT tRNA complement(5758..5823) FT /product="tRNA-Cys" FT tRNA complement(5823..5888) FT /product="tRNA-Tyr" FT gene 5901..7442 FT /gene="COX1" FT CDS 5901..7442 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B2U9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B2U9" FT /protein_id="AGD82279.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNVLSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7442..7513) FT /product="tRNA-Ser" FT tRNA 7515..7582 FT /product="tRNA-Asp" FT gene 7583..8266 FT /gene="COX2" FT CDS 7583..8266 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /protein_id="AGD82280.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8292..8361 FT /product="tRNA-Lys" FT gene 8363..8569 FT /gene="ATP8" FT CDS 8363..8569 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82281.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8524..9204 FT /gene="ATP6" FT CDS 8524..9204 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B1L8" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B1L8" FT /protein_id="AGD82282.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEVAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9204..9987 FT /gene="COX3" FT CDS 9204..9987 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9987,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82283.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9988..10055 FT /product="tRNA-Gly" FT gene 10056..10401 FT /gene="ND3" FT CDS 10056..10401 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10401,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82284.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWAE" FT tRNA 10402..10466 FT /product="tRNA-Arg" FT gene 10467..10763 FT /gene="ND4L" FT CDS 10467..10763 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AGD82285.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10757..12134 FT /gene="ND4" FT CDS 10757..12134 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12134,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9B1S7" FT /db_xref="InterPro:IPR000260" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="InterPro:IPR010227" FT /db_xref="UniProtKB/TrEMBL:Q9B1S7" FT /protein_id="AGD82286.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSLTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12135..12203 FT /product="tRNA-His" FT tRNA 12204..12262 FT /product="tRNA-Ser" FT tRNA 12263..12333 FT /product="tRNA-Leu" FT gene 12334..14145 FT /gene="ND5" FT CDS 12334..14145 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q9B1F8" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q9B1F8" FT /protein_id="AGD82287.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPASPFQTTIPLYLKLTALAVTLLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPTITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14146..14670) FT /gene="ND6" FT CDS complement(14146..14670) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82288.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14671..14739) FT /product="tRNA-Glu" FT gene 14744..15884 FT /gene="CYTB" FT CDS 14744..15884 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15884,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q6VJ80" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q6VJ80" FT /protein_id="AGD82289.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15885..15950 FT /product="tRNA-Thr" FT tRNA complement(15952..16020) FT /product="tRNA-Pro" XX SQ Sequence 16566 BP; 5117 A; 5183 C; 2177 G; 4089 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcgagc atacctatta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct cccccgcttc tggccacagc acttaaacac atctctgcca aaccccaaaa 360 acaaagaacc ctaacaccag cctaaccaga tttcaaattt tatcttttgg cggtatgcac 420 ttttaacagt caccccccaa ctaacacatt attttcccct cccactccca tactactaat 480 ctcatcaata caacccccgc ccatcctacc cagcacacac accgctgcta accccatacc 540 ccgaaccaac caaaccccaa agacaccccc cacagtttat gtagcttacc tcctcaaagc 600 aatacactga aaatgtttag acgggctcac atcaccccat aaacaaatag gtttggtcct 660 agcctttcta ttagctctta gtaagattac acatgcaagc atccccgttc cagtgagttc 720 accctctaaa tcaccacgat caaaagggac aagcatcaag cacgcaacaa tgcagctcaa 780 aacgcttagc ctagccacac ccccacggga aacagcagtg ataaaccttt agcaataaac 840 gaaagttcaa ctaagctata ctaaccccag ggttggtcaa tttcgtgcca gccaccgcgg 900 tcacacgatt aacccaagtc aatagaagcc ggcgtaaaga gtgttttaga tcaccccctc 960 cccaataaag ctaaaactca cctgagttgt aaaaaactcc agttgacaca aaataaacta 1020 cgaaagtggc tttaacatat ctgaatacac aatagctaag acccaaactg ggattagata 1080 ccccactatg cttagcccta aacctcaaca gttaaatcaa caaaactgct cgccagaaca 1140 ctacgagcca cagcttaaaa ctcaaaggac ctggcggtgc ttcatatccc tctagaggag 1200 cctgttctgt aatcgataaa ccccgatcaa cctcaccacc ccttgctcag cctatatacc 1260 gccatcttca gcaaaccctg atgaaggcta caaagtaagc gcaagtaccc acgtaaagac 1320 gttaggtcaa ggtgtagccc atgaggtggc aagaaatggg ctacattttc taccccagaa 1380 aactacgata gcccttatga aacttaaggg tcgaaggtgg atttagcagt aaactgagag 1440 tagagtgctt agttgaacag ggccctgaag cgcgtacaca ccgcccgtca ccctcctcaa 1500 gtatacttca aaggacattt aactaaaacc cctacgcatt tatatagagg agacaagtcg 1560 taacatggta agtgtactgg aaagtgcact tggacgaacc agagtgtagc ttaacacaaa 1620 gcacccaact tacacttagg agatttcaac ttaacttgac cgctctgagc taaacctagc 1680 cccaaaccca ctccacctta ctaccagaca accttagcca aaccatttac ccaaataaag 1740 tataggcgat agaaattgaa acctggcgca atagatatag taccgcaagg gaaagatgaa 1800 aaattataac caagcataat atagcaagga ctaaccccta taccttctgc ataatgaatt 1860 aactagaaat aactttgcaa ggagagccaa agctaagacc cccgaaacca gacgagctac 1920 ctaagaacag ctaaaagagc acacccgtct atgtagcaaa atagtgggaa gatttatagg 1980 tagaggcgac aaacctaccg agcctggtga tagctggttg tccaagatag aatcttagtt 2040 caactttaaa tttgcccaca gaaccctcta aatccccttg taaatttaac tgttagtcca 2100 aagaggaaca gctctttgga cactaggaaa aaaccttgta gagagagtaa aaaatttaac 2160 acccatagta ggcctaaaag cagccaccaa ttaagaaagc gttcaagctc aacacccact 2220 acctaaaaaa tcccaaacat ataactgaac tcctcacacc caattggacc aatctatcac 2280 cctatagaag aactaatgtt agtataagta acatgaaaac attctcctcc gcataagcct 2340 gcgtcagatt aaaacactga actgacaatt aacagcccaa tatctacaat caaccaacaa 2400 gtcattatta ccctcactgt caacccaaca caggcatgct cataaggaaa ggttaaaaaa 2460 agtaaaagga actcggcaaa tcttaccccg cctgtttacc aaaaacatca cctctagcat 2520 caccagtatt agaggcaccg cctgcccagt gacacatgtt taacggccgc ggtaccctaa 2580 ccgtgcaaag gtagcataat cacttgttcc ttaaataggg acctgtatga atggctccac 2640 gagggttcag ctgtctctta cttttaacca gtgaaattga cctgcccgtg aagaggcggg 2700 catgacacag caagacgaga agaccctatg gagctttaat ttattaatgc aaacaatacc 2760 taacaaaccc acaggtccta aactaccaaa cctgcattaa aaatttcggt tggggcgacc 2820 tcggagcaga accaaacctc cgagcagtac atgctaagac ttcaccagtc aaagcgaact 2880 accatactca attgatccaa taacttgacc aacggaacaa gttaccctag ggataacagc 2940 gcaatcctat tctagagtcc atatcaacaa tagggtttac gacctcgatg ttggatcagg 3000 acatcccgat ggtgcagccg ctattaaagg ttcgtttgtt caacgattaa agtcctacgt 3060 gatctgagtt cagaccggag taatccaggt cggtttctat ctacttcaaa ttcctccctg 3120 tacgaaagga caagagaaat aaggcctact tcacaaagcg ccttcccccg taaatgatat 3180 catctcaact tagtattata cccacaccca cccaagaaca gggtttgtta agatggcaga 3240 gcccggtaat cgcataaaac ttaaaacttt acagtcagag gttcaattcc tcttcttaac 3300 aacataccca tggccaacct cctactcctc attgtaccca ttctaatcgc aatggcattc 3360 ctaatgctta ccgaacgaaa aattctaggc tatatacaac tacgcaaagg ccccaacgtt 3420 gtaggcccct acgggctact acaacccttc gctgacgcca taaaactctt caccaaagag 3480 cccctaaaac ccgccacatc taccatcacc ctatacatca ccgccccgac cttagctctc 3540 accatcgctc ttctactatg aacccccctc cccataccca accccctggt taacctcaac 3600 ctaggcctcc tatttattct agccacctct agcctagccg tttactcaat cctctgatca 3660 gggtgagcat caaactcaaa ctacgccctg atcggcgcac tgcgagcagt agcccaaaca 3720 atctcatatg aagtcaccct agccatcatt ctactatcaa cattactaat aagtggctcc 3780 tttaacctct ccacccttat cacaacacaa gaacacctct gattactcct gccatcatga 3840 cccttggcca taatatgatt tatctccaca ctagcagaga ccaaccgaac ccccttcgac 3900 cttgccgaag gggagtccga actagtctca ggcttcaaca tcgaatacgc cgcaggcccc 3960 ttcgccctat tcttcatagc cgaatacaca aacattatta taataaacac cctcaccact 4020 acaatcttcc taggaacaac atatgacgca ctctcccctg aactctacac aacatatttt 4080 gtcaccaaga ccctacttct gacctccctg ttcttatgaa ttcgaacagc atacccccga 4140 ttccgctacg accaactcat acacctccta tgaaaaaact tcctaccact caccctagca 4200 ttacttatat gatatgtctc catacccatt acaatctcca gcattccccc tcaaacctaa 4260 gaaatatgtc tgataaaaga gttactttga tagagtaaat aataggagtt taaaccccct 4320 tatttctagg actatgagaa tcgaacccat ccctgagaat ccaaaattct ccgtgccacc 4380 tatcacaccc catcctaaag taaggtcagc taaataagct atcgggccca taccccgaaa 4440 atgttggtta tacccttccc gtactaatta atcccctggc ccaacccgtc atctactcta 4500 ccatctttgc aggcacactc atcacagcgc taagctcaca ctgatttttt acctgagtag 4560 gcctagaaat aaacatgcta gcctttattc cagttctaac caaaaaaata aaccctcgtt 4620 ccacagaagc tgccatcaag tatttcctca cgcaagcaac cgcatccata atccttctaa 4680 tagctatcct cttcaacaat atactctccg gacaatgaac cataaccaat actaccaatc 4740 aatactcatc attaataatc ataatggcta tagcaataaa actaggaata gccccctttc 4800 acttctgagt cccagaggtt acccaaggca cccctctgac atccggcctg cttcttctca 4860 catgacaaaa actagccccc atctcaatca tataccaaat ctccccctca ctaaacgtaa 4920 gccttctcct cactctctca atcttatcca tcatagcagg cagttgaggt ggattaaacc 4980 aaacccagct acgcaaaatc ttagcatact cctcaattac ccacatagga tgaataatag 5040 cagttctacc gtacaaccct aacataacca ttcttaattt aactatttat attatcctaa 5100 ctactaccgc attcctacta ctcaacttaa actccagcac cacgacccta ctactatctc 5160 gcacctgaaa caagctaaca tgactaacac ccttaattcc atccaccctc ctctccctag 5220 gaggcctgcc cccgctaacc ggctttttgc ccaaatgggc cattatcgaa gaattcacaa 5280 aaaacaatag cctcatcatc cccaccatca tagccaccat caccctcctt aacctctact 5340 tctacctacg cctaatctac tccacctcaa tcacactact ccccatatct aacaacgtaa 5400 aaataaaatg acagtttgaa catacaaaac ccaccccact cctccccaca ctcatcgccc 5460 ttaccacgct actcctacct atctcccctt ttatactaat aatcttatag aaatttaggt 5520 taaatacaga ccaagagcct tcaaagccct cagtaagttg caatacttaa tttctgtaac 5580 agctaaggac tgcaaaaccc cactctgcat caactgaacg caaatcagcc actttaatta 5640 agctaagccc ttactagacc aatgggactt aaacccacaa acacttagtt aacagctaag 5700 caccctaatc aactggcttc aatctacttc tcccgccgcc gggaaaaaag gcgggagaag 5760 ccccggcagg tttgaagctg cttcttcgaa tttgcaattc aatatgagaa tcacctcgga 5820 gctggtaaaa agaggcctaa cccctgtctt tagatttaca gtccaatgct tcactcagcc 5880 attttacctc acccccactg atgttcgccg accgttgact attctctaca aaccacaaag 5940 acattggaac actataccta ttattcggcg catgagctgg agtcctaggc acagctctaa 6000 gcctccttat tcgagccgag ctgggccagc caggcaacct tctaggtaac gaccacatct 6060 acaacgttat cgtcacagcc catgcatttg taataatctt cttcatagta atacccatca 6120 taatcggagg ctttggcaac tgactagttc ccctaataat cggtgccccc gatatggcgt 6180 tcccccgcat aaacaacata agcttctgac tcttacctcc ctctctccta ctcctgctcg 6240 catctgctat agtggaggcc ggagcaggaa caggttgaac agtctaccct cccttagcag 6300 ggaactactc ccaccctgga gcctccgtag acctaaccat cttctcctta cacctagcag 6360 gtgtctcctc tatcttaggg gccatcaatt tcatcacaac aattatcaat ataaaacccc 6420 ctgccataac ccaataccaa acgcccctct tcgtctgatc cgtcctaatc acagcagtcc 6480 tacttctcct atctctccca gtcctagctg ctggcatcac tatactacta acagaccgca 6540 acctcaacac caccttcttc gaccccgccg gaggaggaga ccccattcta taccaacacc 6600 tattctgatt tttcggtcac cctgaagttt atattcttat cctaccaggc ttcggaataa 6660 tctcccatat tgtaacttac tactccggaa aaaaagaacc atttggatac ataggtatgg 6720 tctgagctat gatatcaatt ggcttcctag ggtttatcgt gtgagcacac catatattta 6780 cagtaggaat agacgtagac acacgagcat atttcacctc cgctaccata atcatcgcta 6840 tccccaccgg cgtcaaagta tttagctgac tcgccacact ccacggaagc aatatgaaat 6900 gatctgctgc agtgctctga gccctaggat tcatttttct tttcaccgta ggtggcctga 6960 ctggcattgt attagcaaac tcatcactag acatcgtact acacgacacg tactacgttg 7020 tagctcactt ccactatgtc ctatcaatag gagctgtatt tgccatcata ggaggcttca 7080 ttcactgatt tcccctattc tcaggctaca ccctagacca aacctacgcc aaaatccatt 7140 tcgctatcat attcatcggc gtaaatctaa ctttcttccc acaacacttt ctcggcctat 7200 ccggaatgcc ccgacgttac tcggactacc ccgatgcata caccacatga aatgtcctat 7260 catctgtagg ctcattcatt tctctaacag cagtaatatt aataattttc atgatttgag 7320 aagccttcgc ttcgaagcga aaagtcctaa tagtagaaga accctccata aacctggagt 7380 gactatatgg atgcccccca ccctaccaca cattcgaaga acccgtatac ataaaatcta 7440 gacaaaaaag gaaggaatcg aaccccccaa agctggtttc aagccaaccc catggcctcc 7500 atgacttttt caaaaagata ttagaaaaac catttcataa ctttgtcaaa gttaaattat 7560 aggctaaatc ctatatatct taatggcaca tgcagcgcaa gtaggtctac aagacgctac 7620 ttcccctatc atagaagagc ttatcacctt tcatgatcac gccctcataa tcattttcct 7680 tatctgcttc ctagtcctgt atgccctttt cctaacactc acaacaaaac taactaatac 7740 taacatctca gacgctcagg aaatagaaac cgtctgaact atcctgcccg ccatcatcct 7800 agtcctcatc gccctcccat ccctacgcat cctttacata acagacgagg tcaacgatcc 7860 ctcccttacc atcaaatcaa ttggccacca atggtactga acctacgagt acaccgacta 7920 cggcggacta atcttcaact cctacatact tcccccatta ttcctagaac caggcgacct 7980 gcgactcctt gacgttgaca atcgagtagt actcccgatt gaagccccca ttcgtataat 8040 aattacatca caagacgtct tgcactcatg agctgtcccc acattaggct taaaaacaga 8100 tgcaattccc ggacgtctaa accaaaccac tttcaccgct acacgaccgg gggtatacta 8160 cggtcaatgc tctgaaatct gtggagcaaa ccacagtttc atgcccatcg tcctagaact 8220 aattccccta aaaatctttg aaatagggcc cgtatttacc ctatagcacc ccctctaccc 8280 cctctagagc ccactgtaaa gctaacttag cattaacctt ttaagttaaa gattaagaga 8340 accaacacct ctttacagtg aaatgcccca actaaatact accgtatggc ccaccataat 8400 tacccccata ctccttacac tattcctcat cacccaacta aaaatattaa acacaaacta 8460 ccacttacct ccctcaccaa agcccataaa aataaaaaat tataacaaac cctgagaacc 8520 aaaatgaacg aaaatctgtt cgcttcattc attgccccca caatcctagg cctacccgcc 8580 gcagtactga tcattctatt tccccctcta ttgatcccca cctccaaata tctcatcaac 8640 aaccgactaa ttaccaccca acaatgacta atcaaactaa cctcaaaaca aatgatagcc 8700 atacacaaca ctaaaggacg aacctgatct cttatactag tatccttaat catttttatt 8760 gccacaacta acctcctcgg actcctgcct cactcattta caccaaccac ccaactatct 8820 ataaacctag ccatggccat ccccttatga gcgggcgcag tgattatagg ctttcgctct 8880 aagattaaaa atgccctagc ccacttccta ccacaaggta cacctacacc ccttatcccc 8940 atactagtta ttatcgaaac catcagccta ctcattcaac caatagccct agccgtacgc 9000 ctaaccgcta acattactgc aggccaccta ctcatgcatc taattggaag cgccacccta 9060 gcaatatcaa ccattaacct tccctctaca cttatcatct tcacaattct aattctactg 9120 actatcctag aagtcgctgt cgccttaatc caagcctacg ttttcacact tctagtaagc 9180 ctctacctgc acgacaacac ataatgaccc accaatcaca tgcctatcat atagtaaaac 9240 ccagcccatg acccctaaca ggggccctct cagccctcct aatgacctcc ggcctagcca 9300 tgtgatttca cttccactcc ataacgctcc tcatactagg cctgctaacc aacacactaa 9360 ccatatacca atgatggcgc gatgtaacac gagaaagcac ataccaaggc caccacacac 9420 cacctgtcca aaaaggcctt cgatacggga taatcctatt tattacctca gaagtttttt 9480 tcttcgcagg atttttctga gccttttacc actccagcct agcccctacc ccccaactag 9540 gagggcactg gcccccaaca ggcatcaccc cgctaaatcc cctagaagtc ccactcctaa 9600 acacatccgt attactcgca tcaggagtat caatcacctg agctcaccat agtctaatag 9660 aaaacaaccg aaaccaaata attcaagcac tgcttattac aattttactg ggtctctatt 9720 ttaccctcct acaagcctca gagtacttcg agtctccctt caccatttcc gacggcatct 9780 acggctcaac attttttgta gccacaggct tccatggact tcacgtcatt attggctcaa 9840 ctttcctcac tatctgcttc atccgccaac taatatttca ctttacatcc aaacatcact 9900 ttggcttcga agccgccgcc tgatactggc attttgtaga tgtggtttga ctatttctgt 9960 atgtctccat ctattgatga gggtcttact cttttagtat aaatagtacc gttaacttcc 10020 aattaactag ttttgacaac attcaaaaaa gagtaataaa cttcgcctta attttaataa 10080 tcaacaccct cctagcctta ctactaataa ttattacatt ttgactacca caactcaacg 10140 gctacataga aaaatccacc ccttacgagt gcggcttcga ccctatatcc cccgcccgcg 10200 tccctttctc cataaaattc ttcttagtag ctattacctt cttattattt gatctagaaa 10260 ttgccctcct tttaccccta ccatgagccc tacaaacaac taacctgcca ctaatagtta 10320 tgtcatccct cttattaatc atcatcctag ccctaagtct ggcctatgag tgactacaaa 10380 aaggattaga ctgagccgaa ttggtatata gtttaaacaa aacgaatgat ttcgactcat 10440 taaattatga taatcatatt taccaaatgc ccctcattta cataaatatt atactggcat 10500 ttaccatctc acttctagga atactagtat atcgctcaca cctcatatcc tccctactat 10560 gcctagaagg aataatacta tcgctattca ttatagctac tctcataacc ctcaacaccc 10620 actccctctt agccaatatt gtgcctattg ccatactagt ttttgccgcc tgcgaagcag 10680 cggtaggcct agccctacta gtctcaatct ccaacacata tggcctagac tacgtacata 10740 acctaaacct actccaatgc taaaactaat cgtcccaaca attatattac taccactgac 10800 atgactctcc aaaaaacaca taatttgaat caacacaacc acccacagcc taattattag 10860 catcatcccc ctgctatttt ttaaccaaat caacaacaac ctatttagct gctccctaac 10920 cttttcctcc gaccctctaa caacccccct cctaatacta actacctgac tcctacccct 10980 cacaatcatg gcaagccaac gccacttatc cagtgaacca ctatcacgaa aaaaactcta 11040 cctctctata ctaatctccc tacaaatctc cttaattata acattcacag ccacagaact 11100 aatcatattt tatatcttct tcgaaaccac acttatcccc accttggcta tcatcacccg 11160 atgaggcaac cagccagaac gcctgaacgc aggcacatac ttcctattct acaccctagt 11220 aggctccctt cccctactca tcgcactaat ttacactcac aacaccctag gctcactaaa 11280 cattctacta cttaccctca ctgcccaaga actatcaaac tcctgagcca acaacttaat 11340 atgactagct tacacaatag cttttatagt aaagatacct ctttacggac tccacttatg 11400 actccctaaa gcccatgtcg aagcccccat cgctgggtca atagtacttg ccgcagtact 11460 cttaaaacta ggcggctatg gtataatacg cctcacactc attctcaacc ccctgacaaa 11520 acacatagcc taccccttcc ttgtactatc cctatgaggc ataattataa caagctccat 11580 ctgcctacga caaacagacc taaaatcgct cattgcatac tcttcaatca gccacatagc 11640 cctcgtagtg acagccattc tcatccaaac cccctgaagc ttcaccggcg cagtcattct 11700 cataatcgcc cacggactta catcctcatt actattctgc ctagcaaact caaactacga 11760 acgcactcac agtcgcatca taatcctctc tcaaggactt caaactctac tcccactaat 11820 agctttttga tgacttctag caagcctcgc taacctcgcc ttacccccca ctattaacct 11880 actgggagaa ctctctgtgc tagtaaccac attctcctga tcaaatatca ctctcctact 11940 tacaggactc aacatactag tcacagccct atactccctc tacatattta ccacaacaca 12000 atgaggctca ctcacccacc acattaacaa cataaaaccc tcattcacac gagaaaacac 12060 cctcatattc atacacctat cccccattct cctcctatcc ctcaaccccg acatcattac 12120 cgggttttcc tcttgtaaat atagtttaac caaaacatca gattgtgaat ctgacaacag 12180 aggcttacga ccccttattt accgagaaag ctcacaagaa ctgctaactc atgcccccat 12240 gtctaacaac atggctttct caacttttaa aggataacag ctatccattg gtcttaggcc 12300 ccaaaaattt tggtgcaact ccaaataaaa gtaataacca tgcacactac tataaccacc 12360 ctaaccctga cttccctaat tccccccatc cttaccaccc tcgttaaccc taacaaaaaa 12420 aactcatacc cccattatgt aaaatccatt gtcgcatcca cctttattat cagtctcttc 12480 cccacaacaa tattcatgtg cctagaccaa gaagttatta tctcgaactg acactgagcc 12540 acaacccaaa caacccagct ctccctaagc ttcaaactag actacttctc cataatattc 12600 atccctgtag cattgttcgt tacatggtcc atcatagaat tctcactgtg atatataaac 12660 tcagacccaa acattaatca gttcttcaaa tatctactca ttttcctaat taccatacta 12720 atcttagtta ccgctaacaa cctattccaa ctgttcatcg gctgagaggg cgtaggaatt 12780 atatccttct tgctcatcag ttgatgatac gcccgagcag atgccaacac agcagccatt 12840 caagcaatcc tatacaaccg tatcggcgat atcggtttca tcctcgcctt agcatgattt 12900 atcctacact ccaactcatg agacccacaa caaatagccc ttctaaacgc taatccaagc 12960 ctcaccccac tactaggcct cctcctagca gcagcaggca aatcagccca attaggcctc 13020 cacccctgac tcccctcagc catagaaggc cccaccccag tctcagccct actccactca 13080 agcactatag ttgtagcagg agtcttctta ctcatccgct tccaccccct agcagaaaat 13140 agcccactaa tccaaactct aacactatgc ttaggcgcta tcaccactct gttcgcagca 13200 gtctgcgccc ttacacaaaa tgacatcaaa aaaatcgtag ccttctccac ttcaagtcaa 13260 ctaggactca tagtagttac aatcggcatc aaccaaccac acctagcatt cctgcacatc 13320 tgtacccacg ccttcttcaa agccatacta tttatgtgct ccgggtccat catccacaac 13380 cttaacaatg aacaagatat tcgaaaaata ggaggactac tcaaaaccat acctctcact 13440 tcaacctccc tcaccattgg cagcctagca ttagcaggaa tacctttcct cacaggtttc 13500 tattccaaag accacatcat cgaaaccgca aacatatcat acacaaacgc ctgagcccta 13560 tctattactc tcatcgctac ctccctaaca agcgcctata gcactcgaat aattcttctc 13620 accctaacag gtcaacctcg cttccctacc cttactaaca ttaacgaaaa taaccccacc 13680 ctactaaacc ccattaaacg cctggcagcc ggaagcctat tcgcaggatt tctcattact 13740 aacaacattt cccccgcatc ccccttccaa acaacaatcc ccctctacct aaaactcaca 13800 gccctcgctg tcactctcct aggacttcta acagccctag acctcaacta cctaaccaac 13860 aaacttaaaa taaaatcccc actatgcaca ttttatttct ccaacatact cggattctac 13920 cctaccatca cacaccgcac aatcccctat ctaggccttc ttacgagcca aaacctgccc 13980 ctactcctcc tagacctaac ctgactagaa aagctactac ctaaaacaat ttcacagcac 14040 caaatctcca cctccatcat cacctcaacc caaaaaggca taattaaact ttacttcctc 14100 tctttcttct tcccactcat cctaacccta ctcctaatca cataacctat tcccccgagc 14160 aatctcaatt acaatataca caccaacaaa caatgttcaa ccagtaacta ctactaatca 14220 acgcccataa tcatacaaag cccccgcacc aataggatcc tcccgaatca accctgaccc 14280 ctctccttca taaattattc agcttcctac actattaaag tttaccacaa ccaccacccc 14340 atcatactct ttcacccaca gcaccaaccc cacctccatc gctaacccca ctaaaacact 14400 caccaagacc tcaacccctg acccccatgc ctcaggatac tcctcaatag ccatcgctgt 14460 agtatatcca aagacaacca tcattccccc taaataaatt aaaaaaacta ttaaacccat 14520 ataacctccc ccaaaattca gaataataac acacccgacc acaccgctaa caatcaatac 14580 taaaccccca taaataggag aaggcttaga agaaaacccc acaaacccca ttactaaacc 14640 cacactcaac agaaacaaag catacatcat tattctcgca cggactacaa ccacgaccaa 14700 tgatatgaaa aaccatcgtt gtatttcaac tacaagaaca ccaatgaccc caatacgcaa 14760 aattaacccc ctaataaaat taattaacca ctcattcatc gacctcccca ccccatccaa 14820 catctccgca tgatgaaact tcggctcact ccttggcgcc tgcctgatcc tccaaatcac 14880 cacaggacta ttcctagcca tgcactactc accagacgcc tcaaccgcct tttcatcaat 14940 cgcccacatc actcgagacg taaattatgg ctgaatcatc cgctaccttc acgccaatgg 15000 cgcctcaata ttctttatct gcctcttcct acacatcggg cgaggcctat attacggatc 15060 atttctctac tcagaaacct gaaacatcgg cattatcctc ctgcttgcaa ctatagcaac 15120 agccttcata ggctatgtcc tcccgtgagg ccaaatatca ttctgagggg ccacagtaat 15180 tacaaactta ctatccgcca tcccatacat tgggacagac ctagttcaat gaatctgagg 15240 aggctactca gtagacagtc ccaccctcac acgattcttt acctttcact tcatcttgcc 15300 cttcattatt gcagccctag cagcactcca cctcctattc ttgcacgaaa cgggatcaaa 15360 caacccccta ggaatcacct cccattccga taaaatcacc ttccaccctt actacacaat 15420 caaagacgcc ctcggcttac ttctcttcct tctctcctta atgacattaa cactattctc 15480 accagacctc ctaggcgacc cagacaatta taccctagcc aaccccttaa acacccctcc 15540 ccacatcaag cccgaatgat atttcctatt cgcctacaca attctccgat ccgtccctaa 15600 caaactagga ggcgtccttg ccctattact atccatcctc atcctagcaa taatccccat 15660 cctccatata tccaaacaac aaagcataat atttcgccca ctaagccaat cactttattg 15720 actcctagcc gcagacctcc tcattctaac ctgaatcgga ggacaaccag taagctaccc 15780 ttttaccatc attggacaag tagcatccgt actatacttc acaacaatcc taatcctaat 15840 accaactatc tccctaattg aaaacaaaat actcaaatgg gcctgtcctt gtagtataaa 15900 ctaatacacc agtcttgtaa accggagatg aaaacctttt tccaaggaca aatcagagaa 15960 aaagtcttta actccaccat tagcacccaa agctaagatt ctaatttaaa ctattctctg 16020 ttctttcatg gggaagcaga tttgggtacc acccaagtat tgactcaccc atcaacaacc 16080 gctatgtatt tcgtacatta ctgccagcca ccatgaatat tgtacggtac cataaatact 16140 tgaccacctg tagtacataa aaccccaacc cacatcaaaa ccctcccccc atgcttacaa 16200 gcaagcacag taatcaacct tcaactgtca cacatcaact gcaactccaa agccacccct 16260 cacccactag gatatcaaca aacctacgca cccttaacag tacatagcac ataaagccat 16320 ttaccgtaca tagcacatta cagtcaaatc ccttctcgtc cccatggatg acccccctca 16380 gataggggtc ccttgaccac catcctccgt gaaatcaata tcccgcacaa gagtgctact 16440 ctcctcgctc cgggcccata acacttgggg gtagctaaag tgaactgtat ccgacatctg 16500 gttcctactt cagggccata aagcctaaat agcccacacg ttccccttaa ataagacatc 16560 acgatg 16566 // ID KC345795; SV 1; circular; genomic DNA; STD; HUM; 16567 BP. XX AC KC345795; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT6_158 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16567 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16567 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; b6dcc73fb91087dd82a9d3d817ce7501. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16567 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT6_158" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="||Ani" FT /db_xref="taxon:9606" FT /haplogroup="L0k" FT D-loop complement(join(16022..16567,1..575)) FT tRNA 576..646 FT /product="tRNA-Phe" FT rRNA 647..1600 FT /product="12S ribosomal RNA" FT tRNA 1601..1669 FT /product="tRNA-Val" FT rRNA 1670..3227 FT /product="16S ribosomal RNA" FT tRNA 3228..3302 FT /product="tRNA-Leu" FT gene 3305..4260 FT /gene="ND1" FT CDS 3305..4260 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4259..4260,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82290.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPITISSIPPQT" FT tRNA 4261..4329 FT /product="tRNA-Ile" FT tRNA complement(4327..4398) FT /product="tRNA-Gln" FT tRNA 4400..4467 FT /product="tRNA-Met" FT gene 4468..5509 FT /gene="ND2" FT CDS 4468..5509 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5509,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82291.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5510..5574 FT /product="tRNA-Trp" FT tRNA complement(5585..5653) FT /product="tRNA-Ala" FT tRNA complement(5655..5727) FT /product="tRNA-Asn" FT tRNA complement(5759..5824) FT /product="tRNA-Cys" FT tRNA complement(5824..5889) FT /product="tRNA-Tyr" FT gene 5902..7443 FT /gene="COX1" FT CDS 5902..7443 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B2U9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B2U9" FT /protein_id="AGD82292.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNVLSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7443..7514) FT /product="tRNA-Ser" FT tRNA 7516..7583 FT /product="tRNA-Asp" FT gene 7584..8267 FT /gene="COX2" FT CDS 7584..8267 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /protein_id="AGD82293.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8293..8362 FT /product="tRNA-Lys" FT gene 8364..8570 FT /gene="ATP8" FT CDS 8364..8570 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82294.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8525..9205 FT /gene="ATP6" FT CDS 8525..9205 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B1L8" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B1L8" FT /protein_id="AGD82295.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEVAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9205..9988 FT /gene="COX3" FT CDS 9205..9988 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9988,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82296.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9989..10056 FT /product="tRNA-Gly" FT gene 10057..10402 FT /gene="ND3" FT CDS 10057..10402 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10402,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82297.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWAE" FT tRNA 10403..10467 FT /product="tRNA-Arg" FT gene 10468..10764 FT /gene="ND4L" FT CDS 10468..10764 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AGD82298.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10758..12135 FT /gene="ND4" FT CDS 10758..12135 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12135,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9B1S7" FT /db_xref="InterPro:IPR000260" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="InterPro:IPR010227" FT /db_xref="UniProtKB/TrEMBL:Q9B1S7" FT /protein_id="AGD82299.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSLTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12136..12204 FT /product="tRNA-His" FT tRNA 12205..12263 FT /product="tRNA-Ser" FT tRNA 12264..12334 FT /product="tRNA-Leu" FT gene 12335..14146 FT /gene="ND5" FT CDS 12335..14146 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q9B1F8" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q9B1F8" FT /protein_id="AGD82300.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPASPFQTTIPLYLKLTALAVTLLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPTITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14147..14671) FT /gene="ND6" FT CDS complement(14147..14671) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82301.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14672..14740) FT /product="tRNA-Glu" FT gene 14745..15885 FT /gene="CYTB" FT CDS 14745..15885 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15885,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q6VJ80" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q6VJ80" FT /protein_id="AGD82302.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15886..15951 FT /product="tRNA-Thr" FT tRNA complement(15953..16021) FT /product="tRNA-Pro" XX SQ Sequence 16567 BP; 5117 A; 5184 C; 2177 G; 4089 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcgagc atacctatta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tattttcccc tcccactccc atactactaa 480 tctcatcaat acaacccccg cccatcctac ccagcacaca caccgctgct aaccccatac 540 cccgaaccaa ccaaacccca aagacacccc ccacagttta tgtagcttac ctcctcaaag 600 caatacactg aaaatgttta gacgggctca catcacccca taaacaaata ggtttggtcc 660 tagcctttct attagctctt agtaagatta cacatgcaag catccccgtt ccagtgagtt 720 caccctctaa atcaccacga tcaaaaggga caagcatcaa gcacgcaaca atgcagctca 780 aaacgcttag cctagccaca cccccacggg aaacagcagt gataaacctt tagcaataaa 840 cgaaagttca actaagctat actaacccca gggttggtca atttcgtgcc agccaccgcg 900 gtcacacgat taacccaagt caatagaagc cggcgtaaag agtgttttag atcaccccct 960 ccccaataaa gctaaaactc acctgagttg taaaaaactc cagttgacac aaaataaact 1020 acgaaagtgg ctttaacata tctgaataca caatagctaa gacccaaact gggattagat 1080 accccactat gcttagccct aaacctcaac agttaaatca acaaaactgc tcgccagaac 1140 actacgagcc acagcttaaa actcaaagga cctggcggtg cttcatatcc ctctagagga 1200 gcctgttctg taatcgataa accccgatca acctcaccac cccttgctca gcctatatac 1260 cgccatcttc agcaaaccct gatgaaggct acaaagtaag cgcaagtacc cacgtaaaga 1320 cgttaggtca aggtgtagcc catgaggtgg caagaaatgg gctacatttt ctaccccaga 1380 aaactacgat agcccttatg aaacttaagg gtcgaaggtg gatttagcag taaactgaga 1440 gtagagtgct tagttgaaca gggccctgaa gcgcgtacac accgcccgtc accctcctca 1500 agtatacttc aaaggacatt taactaaaac ccctacgcat ttatatagag gagacaagtc 1560 gtaacatggt aagtgtactg gaaagtgcac ttggacgaac cagagtgtag cttaacacaa 1620 agcacccaac ttacacttag gagatttcaa cttaacttga ccgctctgag ctaaacctag 1680 ccccaaaccc actccacctt actaccagac aaccttagcc aaaccattta cccaaataaa 1740 gtataggcga tagaaattga aacctggcgc aatagatata gtaccgcaag ggaaagatga 1800 aaaattataa ccaagcataa tatagcaagg actaacccct ataccttctg cataatgaat 1860 taactagaaa taactttgca aggagagcca aagctaagac ccccgaaacc agacgagcta 1920 cctaagaaca gctaaaagag cacacccgtc tatgtagcaa aatagtggga agatttatag 1980 gtagaggcga caaacctacc gagcctggtg atagctggtt gtccaagata gaatcttagt 2040 tcaactttaa atttgcccac agaaccctct aaatcccctt gtaaatttaa ctgttagtcc 2100 aaagaggaac agctctttgg acactaggaa aaaaccttgt agagagagta aaaaatttaa 2160 cacccatagt aggcctaaaa gcagccacca attaagaaag cgttcaagct caacacccac 2220 tacctaaaaa atcccaaaca tataactgaa ctcctcacac ccaattggac caatctatca 2280 ccctatagaa gaactaatgt tagtataagt aacatgaaaa cattctcctc cgcataagcc 2340 tgcgtcagat taaaacactg aactgacaat taacagccca atatctacaa tcaaccaaca 2400 agtcattatt accctcactg tcaacccaac acaggcatgc tcataaggaa aggttaaaaa 2460 aagtaaaagg aactcggcaa atcttacccc gcctgtttac caaaaacatc acctctagca 2520 tcaccagtat tagaggcacc gcctgcccag tgacacatgt ttaacggccg cggtacccta 2580 accgtgcaaa ggtagcataa tcacttgttc cttaaatagg gacctgtatg aatggctcca 2640 cgagggttca gctgtctctt acttttaacc agtgaaattg acctgcccgt gaagaggcgg 2700 gcatgacaca gcaagacgag aagaccctat ggagctttaa tttattaatg caaacaatac 2760 ctaacaaacc cacaggtcct aaactaccaa acctgcatta aaaatttcgg ttggggcgac 2820 ctcggagcag aaccaaacct ccgagcagta catgctaaga cttcaccagt caaagcgaac 2880 taccatactc aattgatcca ataacttgac caacggaaca agttacccta gggataacag 2940 cgcaatccta ttctagagtc catatcaaca atagggttta cgacctcgat gttggatcag 3000 gacatcccga tggtgcagcc gctattaaag gttcgtttgt tcaacgatta aagtcctacg 3060 tgatctgagt tcagaccgga gtaatccagg tcggtttcta tctacttcaa attcctccct 3120 gtacgaaagg acaagagaaa taaggcctac ttcacaaagc gccttccccc gtaaatgata 3180 tcatctcaac ttagtattat acccacaccc acccaagaac agggtttgtt aagatggcag 3240 agcccggtaa tcgcataaaa cttaaaactt tacagtcaga ggttcaattc ctcttcttaa 3300 caacataccc atggccaacc tcctactcct cattgtaccc attctaatcg caatggcatt 3360 cctaatgctt accgaacgaa aaattctagg ctatatacaa ctacgcaaag gccccaacgt 3420 tgtaggcccc tacgggctac tacaaccctt cgctgacgcc ataaaactct tcaccaaaga 3480 gcccctaaaa cccgccacat ctaccatcac cctatacatc accgccccga ccttagctct 3540 caccatcgct cttctactat gaacccccct ccccataccc aaccccctgg ttaacctcaa 3600 cctaggcctc ctatttattc tagccacctc tagcctagcc gtttactcaa tcctctgatc 3660 agggtgagca tcaaactcaa actacgccct gatcggcgca ctgcgagcag tagcccaaac 3720 aatctcatat gaagtcaccc tagccatcat tctactatca acattactaa taagtggctc 3780 ctttaacctc tccaccctta tcacaacaca agaacacctc tgattactcc tgccatcatg 3840 acccttggcc ataatatgat ttatctccac actagcagag accaaccgaa cccccttcga 3900 ccttgccgaa ggggagtccg aactagtctc aggcttcaac atcgaatacg ccgcaggccc 3960 cttcgcccta ttcttcatag ccgaatacac aaacattatt ataataaaca ccctcaccac 4020 tacaatcttc ctaggaacaa catatgacgc actctcccct gaactctaca caacatattt 4080 tgtcaccaag accctacttc tgacctccct gttcttatga attcgaacag catacccccg 4140 attccgctac gaccaactca tacacctcct atgaaaaaac ttcctaccac tcaccctagc 4200 attacttata tgatatgtct ccatacccat tacaatctcc agcattcccc ctcaaaccta 4260 agaaatatgt ctgataaaag agttactttg atagagtaaa taataggagt ttaaaccccc 4320 ttatttctag gactatgaga atcgaaccca tccctgagaa tccaaaattc tccgtgccac 4380 ctatcacacc ccatcctaaa gtaaggtcag ctaaataagc tatcgggccc ataccccgaa 4440 aatgttggtt atacccttcc cgtactaatt aatcccctgg cccaacccgt catctactct 4500 accatctttg caggcacact catcacagcg ctaagctcac actgattttt tacctgagta 4560 ggcctagaaa taaacatgct agcctttatt ccagttctaa ccaaaaaaat aaaccctcgt 4620 tccacagaag ctgccatcaa gtatttcctc acgcaagcaa ccgcatccat aatccttcta 4680 atagctatcc tcttcaacaa tatactctcc ggacaatgaa ccataaccaa tactaccaat 4740 caatactcat cattaataat cataatggct atagcaataa aactaggaat agcccccttt 4800 cacttctgag tcccagaggt tacccaaggc acccctctga catccggcct gcttcttctc 4860 acatgacaaa aactagcccc catctcaatc atataccaaa tctccccctc actaaacgta 4920 agccttctcc tcactctctc aatcttatcc atcatagcag gcagttgagg tggattaaac 4980 caaacccagc tacgcaaaat cttagcatac tcctcaatta cccacatagg atgaataata 5040 gcagttctac cgtacaaccc taacataacc attcttaatt taactattta tattatccta 5100 actactaccg cattcctact actcaactta aactccagca ccacgaccct actactatct 5160 cgcacctgaa acaagctaac atgactaaca cccttaattc catccaccct cctctcccta 5220 ggaggcctgc ccccgctaac cggctttttg cccaaatggg ccattatcga agaattcaca 5280 aaaaacaata gcctcatcat ccccaccatc atagccacca tcaccctcct taacctctac 5340 ttctacctac gcctaatcta ctccacctca atcacactac tccccatatc taacaacgta 5400 aaaataaaat gacagtttga acatacaaaa cccaccccac tcctccccac actcatcgcc 5460 cttaccacgc tactcctacc tatctcccct tttatactaa taatcttata gaaatttagg 5520 ttaaatacag accaagagcc ttcaaagccc tcagtaagtt gcaatactta atttctgtaa 5580 cagctaagga ctgcaaaacc ccactctgca tcaactgaac gcaaatcagc cactttaatt 5640 aagctaagcc cttactagac caatgggact taaacccaca aacacttagt taacagctaa 5700 gcaccctaat caactggctt caatctactt ctcccgccgc cgggaaaaaa ggcgggagaa 5760 gccccggcag gtttgaagct gcttcttcga atttgcaatt caatatgaga atcacctcgg 5820 agctggtaaa aagaggccta acccctgtct ttagatttac agtccaatgc ttcactcagc 5880 cattttacct cacccccact gatgttcgcc gaccgttgac tattctctac aaaccacaaa 5940 gacattggaa cactatacct attattcggc gcatgagctg gagtcctagg cacagctcta 6000 agcctcctta ttcgagccga gctgggccag ccaggcaacc ttctaggtaa cgaccacatc 6060 tacaacgtta tcgtcacagc ccatgcattt gtaataatct tcttcatagt aatacccatc 6120 ataatcggag gctttggcaa ctgactagtt cccctaataa tcggtgcccc cgatatggcg 6180 ttcccccgca taaacaacat aagcttctga ctcttacctc cctctctcct actcctgctc 6240 gcatctgcta tagtggaggc cggagcagga acaggttgaa cagtctaccc tcccttagca 6300 gggaactact cccaccctgg agcctccgta gacctaacca tcttctcctt acacctagca 6360 ggtgtctcct ctatcttagg ggccatcaat ttcatcacaa caattatcaa tataaaaccc 6420 cctgccataa cccaatacca aacgcccctc ttcgtctgat ccgtcctaat cacagcagtc 6480 ctacttctcc tatctctccc agtcctagct gctggcatca ctatactact aacagaccgc 6540 aacctcaaca ccaccttctt cgaccccgcc ggaggaggag accccattct ataccaacac 6600 ctattctgat ttttcggtca ccctgaagtt tatattctta tcctaccagg cttcggaata 6660 atctcccata ttgtaactta ctactccgga aaaaaagaac catttggata cataggtatg 6720 gtctgagcta tgatatcaat tggcttccta gggtttatcg tgtgagcaca ccatatattt 6780 acagtaggaa tagacgtaga cacacgagca tatttcacct ccgctaccat aatcatcgct 6840 atccccaccg gcgtcaaagt atttagctga ctcgccacac tccacggaag caatatgaaa 6900 tgatctgctg cagtgctctg agccctagga ttcatttttc ttttcaccgt aggtggcctg 6960 actggcattg tattagcaaa ctcatcacta gacatcgtac tacacgacac gtactacgtt 7020 gtagctcact tccactatgt cctatcaata ggagctgtat ttgccatcat aggaggcttc 7080 attcactgat ttcccctatt ctcaggctac accctagacc aaacctacgc caaaatccat 7140 ttcgctatca tattcatcgg cgtaaatcta actttcttcc cacaacactt tctcggccta 7200 tccggaatgc cccgacgtta ctcggactac cccgatgcat acaccacatg aaatgtccta 7260 tcatctgtag gctcattcat ttctctaaca gcagtaatat taataatttt catgatttga 7320 gaagccttcg cttcgaagcg aaaagtccta atagtagaag aaccctccat aaacctggag 7380 tgactatatg gatgcccccc accctaccac acattcgaag aacccgtata cataaaatct 7440 agacaaaaaa ggaaggaatc gaacccccca aagctggttt caagccaacc ccatggcctc 7500 catgactttt tcaaaaagat attagaaaaa ccatttcata actttgtcaa agttaaatta 7560 taggctaaat cctatatatc ttaatggcac atgcagcgca agtaggtcta caagacgcta 7620 cttcccctat catagaagag cttatcacct ttcatgatca cgccctcata atcattttcc 7680 ttatctgctt cctagtcctg tatgcccttt tcctaacact cacaacaaaa ctaactaata 7740 ctaacatctc agacgctcag gaaatagaaa ccgtctgaac tatcctgccc gccatcatcc 7800 tagtcctcat cgccctccca tccctacgca tcctttacat aacagacgag gtcaacgatc 7860 cctcccttac catcaaatca attggccacc aatggtactg aacctacgag tacaccgact 7920 acggcggact aatcttcaac tcctacatac ttcccccatt attcctagaa ccaggcgacc 7980 tgcgactcct tgacgttgac aatcgagtag tactcccgat tgaagccccc attcgtataa 8040 taattacatc acaagacgtc ttgcactcat gagctgtccc cacattaggc ttaaaaacag 8100 atgcaattcc cggacgtcta aaccaaacca ctttcaccgc tacacgaccg ggggtatact 8160 acggtcaatg ctctgaaatc tgtggagcaa accacagttt catgcccatc gtcctagaac 8220 taattcccct aaaaatcttt gaaatagggc ccgtatttac cctatagcac cccctctacc 8280 ccctctagag cccactgtaa agctaactta gcattaacct tttaagttaa agattaagag 8340 aaccaacacc tctttacagt gaaatgcccc aactaaatac taccgtatgg cccaccataa 8400 ttacccccat actccttaca ctattcctca tcacccaact aaaaatatta aacacaaact 8460 accacttacc tccctcacca aagcccataa aaataaaaaa ttataacaaa ccctgagaac 8520 caaaatgaac gaaaatctgt tcgcttcatt cattgccccc acaatcctag gcctacccgc 8580 cgcagtactg atcattctat ttccccctct attgatcccc acctccaaat atctcatcaa 8640 caaccgacta attaccaccc aacaatgact aatcaaacta acctcaaaac aaatgatagc 8700 catacacaac actaaaggac gaacctgatc tcttatacta gtatccttaa tcatttttat 8760 tgccacaact aacctcctcg gactcctgcc tcactcattt acaccaacca cccaactatc 8820 tataaaccta gccatggcca tccccttatg agcgggcgca gtgattatag gctttcgctc 8880 taagattaaa aatgccctag cccacttcct accacaaggt acacctacac cccttatccc 8940 catactagtt attatcgaaa ccatcagcct actcattcaa ccaatagccc tagccgtacg 9000 cctaaccgct aacattactg caggccacct actcatgcat ctaattggaa gcgccaccct 9060 agcaatatca accattaacc ttccctctac acttatcatc ttcacaattc taattctact 9120 gactatccta gaagtcgctg tcgccttaat ccaagcctac gttttcacac ttctagtaag 9180 cctctacctg cacgacaaca cataatgacc caccaatcac atgcctatca tatagtaaaa 9240 cccagcccat gacccctaac aggggccctc tcagccctcc taatgacctc cggcctagcc 9300 atgtgatttc acttccactc cataacgctc ctcatactag gcctgctaac caacacacta 9360 accatatacc aatgatggcg cgatgtaaca cgagaaagca cataccaagg ccaccacaca 9420 ccacctgtcc aaaaaggcct tcgatacggg ataatcctat ttattacctc agaagttttt 9480 ttcttcgcag gatttttctg agccttttac cactccagcc tagcccctac cccccaacta 9540 ggagggcact ggcccccaac aggcatcacc ccgctaaatc ccctagaagt cccactccta 9600 aacacatccg tattactcgc atcaggagta tcaatcacct gagctcacca tagtctaata 9660 gaaaacaacc gaaaccaaat aattcaagca ctgcttatta caattttact gggtctctat 9720 tttaccctcc tacaagcctc agagtacttc gagtctccct tcaccatttc cgacggcatc 9780 tacggctcaa cattttttgt agccacaggc ttccatggac ttcacgtcat tattggctca 9840 actttcctca ctatctgctt catccgccaa ctaatatttc actttacatc caaacatcac 9900 tttggcttcg aagccgccgc ctgatactgg cattttgtag atgtggtttg actatttctg 9960 tatgtctcca tctattgatg agggtcttac tcttttagta taaatagtac cgttaacttc 10020 caattaacta gttttgacaa cattcaaaaa agagtaataa acttcgcctt aattttaata 10080 atcaacaccc tcctagcctt actactaata attattacat tttgactacc acaactcaac 10140 ggctacatag aaaaatccac cccttacgag tgcggcttcg accctatatc ccccgcccgc 10200 gtccctttct ccataaaatt cttcttagta gctattacct tcttattatt tgatctagaa 10260 attgccctcc ttttacccct accatgagcc ctacaaacaa ctaacctgcc actaatagtt 10320 atgtcatccc tcttattaat catcatccta gccctaagtc tggcctatga gtgactacaa 10380 aaaggattag actgagccga attggtatat agtttaaaca aaacgaatga tttcgactca 10440 ttaaattatg ataatcatat ttaccaaatg cccctcattt acataaatat tatactggca 10500 tttaccatct cacttctagg aatactagta tatcgctcac acctcatatc ctccctacta 10560 tgcctagaag gaataatact atcgctattc attatagcta ctctcataac cctcaacacc 10620 cactccctct tagccaatat tgtgcctatt gccatactag tttttgccgc ctgcgaagca 10680 gcggtaggcc tagccctact agtctcaatc tccaacacat atggcctaga ctacgtacat 10740 aacctaaacc tactccaatg ctaaaactaa tcgtcccaac aattatatta ctaccactga 10800 catgactctc caaaaaacac ataatttgaa tcaacacaac cacccacagc ctaattatta 10860 gcatcatccc cctgctattt tttaaccaaa tcaacaacaa cctatttagc tgctccctaa 10920 ccttttcctc cgaccctcta acaacccccc tcctaatact aactacctga ctcctacccc 10980 tcacaatcat ggcaagccaa cgccacttat ccagtgaacc actatcacga aaaaaactct 11040 acctctctat actaatctcc ctacaaatct ccttaattat aacattcaca gccacagaac 11100 taatcatatt ttatatcttc ttcgaaacca cacttatccc caccttggct atcatcaccc 11160 gatgaggcaa ccagccagaa cgcctgaacg caggcacata cttcctattc tacaccctag 11220 taggctccct tcccctactc atcgcactaa tttacactca caacacccta ggctcactaa 11280 acattctact acttaccctc actgcccaag aactatcaaa ctcctgagcc aacaacttaa 11340 tatgactagc ttacacaata gcttttatag taaagatacc tctttacgga ctccacttat 11400 gactccctaa agcccatgtc gaagccccca tcgctgggtc aatagtactt gccgcagtac 11460 tcttaaaact aggcggctat ggtataatac gcctcacact cattctcaac cccctgacaa 11520 aacacatagc ctaccccttc cttgtactat ccctatgagg cataattata acaagctcca 11580 tctgcctacg acaaacagac ctaaaatcgc tcattgcata ctcttcaatc agccacatag 11640 ccctcgtagt gacagccatt ctcatccaaa ccccctgaag cttcaccggc gcagtcattc 11700 tcataatcgc ccacggactt acatcctcat tactattctg cctagcaaac tcaaactacg 11760 aacgcactca cagtcgcatc ataatcctct ctcaaggact tcaaactcta ctcccactaa 11820 tagctttttg atgacttcta gcaagcctcg ctaacctcgc cttacccccc actattaacc 11880 tactgggaga actctctgtg ctagtaacca cattctcctg atcaaatatc actctcctac 11940 ttacaggact caacatacta gtcacagccc tatactccct ctacatattt accacaacac 12000 aatgaggctc actcacccac cacattaaca acataaaacc ctcattcaca cgagaaaaca 12060 ccctcatatt catacaccta tcccccattc tcctcctatc cctcaacccc gacatcatta 12120 ccgggttttc ctcttgtaaa tatagtttaa ccaaaacatc agattgtgaa tctgacaaca 12180 gaggcttacg accccttatt taccgagaaa gctcacaaga actgctaact catgccccca 12240 tgtctaacaa catggctttc tcaactttta aaggataaca gctatccatt ggtcttaggc 12300 cccaaaaatt ttggtgcaac tccaaataaa agtaataacc atgcacacta ctataaccac 12360 cctaaccctg acttccctaa ttccccccat ccttaccacc ctcgttaacc ctaacaaaaa 12420 aaactcatac ccccattatg taaaatccat tgtcgcatcc acctttatta tcagtctctt 12480 ccccacaaca atattcatgt gcctagacca agaagttatt atctcgaact gacactgagc 12540 cacaacccaa acaacccagc tctccctaag cttcaaacta gactacttct ccataatatt 12600 catccctgta gcattgttcg ttacatggtc catcatagaa ttctcactgt gatatataaa 12660 ctcagaccca aacattaatc agttcttcaa atatctactc attttcctaa ttaccatact 12720 aatcttagtt accgctaaca acctattcca actgttcatc ggctgagagg gcgtaggaat 12780 tatatccttc ttgctcatca gttgatgata cgcccgagca gatgccaaca cagcagccat 12840 tcaagcaatc ctatacaacc gtatcggcga tatcggtttc atcctcgcct tagcatgatt 12900 tatcctacac tccaactcat gagacccaca acaaatagcc cttctaaacg ctaatccaag 12960 cctcacccca ctactaggcc tcctcctagc agcagcaggc aaatcagccc aattaggcct 13020 ccacccctga ctcccctcag ccatagaagg ccccacccca gtctcagccc tactccactc 13080 aagcactata gttgtagcag gagtcttctt actcatccgc ttccaccccc tagcagaaaa 13140 tagcccacta atccaaactc taacactatg cttaggcgct atcaccactc tgttcgcagc 13200 agtctgcgcc cttacacaaa atgacatcaa aaaaatcgta gccttctcca cttcaagtca 13260 actaggactc atagtagtta caatcggcat caaccaacca cacctagcat tcctgcacat 13320 ctgtacccac gccttcttca aagccatact atttatgtgc tccgggtcca tcatccacaa 13380 ccttaacaat gaacaagata ttcgaaaaat aggaggacta ctcaaaacca tacctctcac 13440 ttcaacctcc ctcaccattg gcagcctagc attagcagga atacctttcc tcacaggttt 13500 ctattccaaa gaccacatca tcgaaaccgc aaacatatca tacacaaacg cctgagccct 13560 atctattact ctcatcgcta cctccctaac aagcgcctat agcactcgaa taattcttct 13620 caccctaaca ggtcaacctc gcttccctac ccttactaac attaacgaaa ataaccccac 13680 cctactaaac cccattaaac gcctggcagc cggaagccta ttcgcaggat ttctcattac 13740 taacaacatt tcccccgcat cccccttcca aacaacaatc cccctctacc taaaactcac 13800 agccctcgct gtcactctcc taggacttct aacagcccta gacctcaact acctaaccaa 13860 caaacttaaa ataaaatccc cactatgcac attttatttc tccaacatac tcggattcta 13920 ccctaccatc acacaccgca caatccccta tctaggcctt cttacgagcc aaaacctgcc 13980 cctactcctc ctagacctaa cctgactaga aaagctacta cctaaaacaa tttcacagca 14040 ccaaatctcc acctccatca tcacctcaac ccaaaaaggc ataattaaac tttacttcct 14100 ctctttcttc ttcccactca tcctaaccct actcctaatc acataaccta ttcccccgag 14160 caatctcaat tacaatatac acaccaacaa acaatgttca accagtaact actactaatc 14220 aacgcccata atcatacaaa gcccccgcac caataggatc ctcccgaatc aaccctgacc 14280 cctctccttc ataaattatt cagcttccta cactattaaa gtttaccaca accaccaccc 14340 catcatactc tttcacccac agcaccaacc ccacctccat cgctaacccc actaaaacac 14400 tcaccaagac ctcaacccct gacccccatg cctcaggata ctcctcaata gccatcgctg 14460 tagtatatcc aaagacaacc atcattcccc ctaaataaat taaaaaaact attaaaccca 14520 tataacctcc cccaaaattc agaataataa cacacccgac cacaccgcta acaatcaata 14580 ctaaaccccc ataaatagga gaaggcttag aagaaaaccc cacaaacccc attactaaac 14640 ccacactcaa cagaaacaaa gcatacatca ttattctcgc acggactaca accacgacca 14700 atgatatgaa aaaccatcgt tgtatttcaa ctacaagaac accaatgacc ccaatacgca 14760 aaattaaccc cctaataaaa ttaattaacc actcattcat cgacctcccc accccatcca 14820 acatctccgc atgatgaaac ttcggctcac tccttggcgc ctgcctgatc ctccaaatca 14880 ccacaggact attcctagcc atgcactact caccagacgc ctcaaccgcc ttttcatcaa 14940 tcgcccacat cactcgagac gtaaattatg gctgaatcat ccgctacctt cacgccaatg 15000 gcgcctcaat attctttatc tgcctcttcc tacacatcgg gcgaggccta tattacggat 15060 catttctcta ctcagaaacc tgaaacatcg gcattatcct cctgcttgca actatagcaa 15120 cagccttcat aggctatgtc ctcccgtgag gccaaatatc attctgaggg gccacagtaa 15180 ttacaaactt actatccgcc atcccataca ttgggacaga cctagttcaa tgaatctgag 15240 gaggctactc agtagacagt cccaccctca cacgattctt tacctttcac ttcatcttgc 15300 ccttcattat tgcagcccta gcagcactcc acctcctatt cttgcacgaa acgggatcaa 15360 acaaccccct aggaatcacc tcccattccg ataaaatcac cttccaccct tactacacaa 15420 tcaaagacgc cctcggctta cttctcttcc ttctctcctt aatgacatta acactattct 15480 caccagacct cctaggcgac ccagacaatt ataccctagc caacccctta aacacccctc 15540 cccacatcaa gcccgaatga tatttcctat tcgcctacac aattctccga tccgtcccta 15600 acaaactagg aggcgtcctt gccctattac tatccatcct catcctagca ataatcccca 15660 tcctccatat atccaaacaa caaagcataa tatttcgccc actaagccaa tcactttatt 15720 gactcctagc cgcagacctc ctcattctaa cctgaatcgg aggacaacca gtaagctacc 15780 cttttaccat cattggacaa gtagcatccg tactatactt cacaacaatc ctaatcctaa 15840 taccaactat ctccctaatt gaaaacaaaa tactcaaatg ggcctgtcct tgtagtataa 15900 actaatacac cagtcttgta aaccggagat gaaaaccttt ttccaaggac aaatcagaga 15960 aaaagtcttt aactccacca ttagcaccca aagctaagat tctaatttaa actattctct 16020 gttctttcat ggggaagcag atttgggtac cacccaagta ttgactcacc catcaacaac 16080 cgctatgtat ttcgtacatt actgccagcc accatgaata ttgtacggta ccataaatac 16140 ttgaccacct gtagtacata aaaccccaac ccacatcaaa accctccccc catgcttaca 16200 agcaagcaca gtaatcaacc ttcaactgtc acacatcaac tgcaactcca aagccacccc 16260 tcacccacta ggatatcaac aaacctacgc acccttaaca gtacatagca cataaagcca 16320 tttaccgtac atagcacatt acagtcaaat cccttctcgt ccccatggat gacccccctc 16380 agataggggt cccttgacca ccatcctccg tgaaatcaat atcccgcaca agagtgctac 16440 tctcctcgct ccgggcccat aacacttggg ggtagctaaa gtgaactgta tccgacatct 16500 ggttcctact tcagggccat aaagcctaaa tagcccacac gttcccctta aataagacat 16560 cacgatg 16567 // ID KC345796; SV 1; circular; genomic DNA; STD; HUM; 16567 BP. XX AC KC345796; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT6_184 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16567 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16567 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; 0a8945387a27fee3f85de92c820798c3. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16567 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT6_184" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="||Ani" FT /db_xref="taxon:9606" FT /haplogroup="L0k" FT D-loop complement(join(16022..16567,1..575)) FT tRNA 576..646 FT /product="tRNA-Phe" FT rRNA 647..1600 FT /product="12S ribosomal RNA" FT tRNA 1601..1669 FT /product="tRNA-Val" FT rRNA 1670..3227 FT /product="16S ribosomal RNA" FT tRNA 3228..3302 FT /product="tRNA-Leu" FT gene 3305..4260 FT /gene="ND1" FT CDS 3305..4260 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4259..4260,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82303.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPITISSIPPQT" FT tRNA 4261..4329 FT /product="tRNA-Ile" FT tRNA complement(4327..4398) FT /product="tRNA-Gln" FT tRNA 4400..4467 FT /product="tRNA-Met" FT gene 4468..5509 FT /gene="ND2" FT CDS 4468..5509 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5509,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82304.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5510..5574 FT /product="tRNA-Trp" FT tRNA complement(5585..5653) FT /product="tRNA-Ala" FT tRNA complement(5655..5727) FT /product="tRNA-Asn" FT tRNA complement(5759..5824) FT /product="tRNA-Cys" FT tRNA complement(5824..5889) FT /product="tRNA-Tyr" FT gene 5902..7443 FT /gene="COX1" FT CDS 5902..7443 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B2U9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B2U9" FT /protein_id="AGD82305.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNVLSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7443..7514) FT /product="tRNA-Ser" FT tRNA 7516..7583 FT /product="tRNA-Asp" FT gene 7584..8267 FT /gene="COX2" FT CDS 7584..8267 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /protein_id="AGD82306.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8293..8362 FT /product="tRNA-Lys" FT gene 8364..8570 FT /gene="ATP8" FT CDS 8364..8570 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82307.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8525..9205 FT /gene="ATP6" FT CDS 8525..9205 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B1L8" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B1L8" FT /protein_id="AGD82308.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEVAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9205..9988 FT /gene="COX3" FT CDS 9205..9988 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9988,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82309.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9989..10056 FT /product="tRNA-Gly" FT gene 10057..10402 FT /gene="ND3" FT CDS 10057..10402 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10402,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82310.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWAE" FT tRNA 10403..10467 FT /product="tRNA-Arg" FT gene 10468..10764 FT /gene="ND4L" FT CDS 10468..10764 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AGD82311.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10758..12135 FT /gene="ND4" FT CDS 10758..12135 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12135,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9B1S7" FT /db_xref="InterPro:IPR000260" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="InterPro:IPR010227" FT /db_xref="UniProtKB/TrEMBL:Q9B1S7" FT /protein_id="AGD82312.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSLTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12136..12204 FT /product="tRNA-His" FT tRNA 12205..12263 FT /product="tRNA-Ser" FT tRNA 12264..12334 FT /product="tRNA-Leu" FT gene 12335..14146 FT /gene="ND5" FT CDS 12335..14146 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q9B1F8" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q9B1F8" FT /protein_id="AGD82313.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPASPFQTTIPLYLKLTALAVTLLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPTITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14147..14671) FT /gene="ND6" FT CDS complement(14147..14671) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82314.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14672..14740) FT /product="tRNA-Glu" FT gene 14745..15885 FT /gene="CYTB" FT CDS 14745..15885 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15885,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q6VJ80" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q6VJ80" FT /protein_id="AGD82315.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15886..15951 FT /product="tRNA-Thr" FT tRNA complement(15953..16021) FT /product="tRNA-Pro" XX SQ Sequence 16567 BP; 5117 A; 5184 C; 2177 G; 4089 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatt ccattattta tcgcacctac gttcaatatt 180 acaggcgagc atacctatta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tattttcccc tcccactccc atactactaa 480 tctcatcaat acaacccccg cccatcctac ccagcacaca caccgctgct aaccccatac 540 cccgaaccaa ccaaacccca aagacacccc ccacagttta tgtagcttac ctcctcaaag 600 caatacactg aaaatgttta gacgggctca catcacccca taaacaaata ggtttggtcc 660 tagcctttct attagctctt agtaagatta cacatgcaag catccccgtt ccagtgagtt 720 caccctctaa atcaccacga tcaaaaggga caagcatcaa gcacgcaaca atgcagctca 780 aaacgcttag cctagccaca cccccacggg aaacagcagt gataaacctt tagcaataaa 840 cgaaagttca actaagctat actaacccca gggttggtca atttcgtgcc agccaccgcg 900 gtcacacgat taacccaagt caatagaagc cggcgtaaag agtgttttag atcaccccct 960 ccccaataaa gctaaaactc acctgagttg taaaaaactc cagttgacac aaaataaact 1020 acgaaagtgg ctttaacata tctgaataca caatagctaa gacccaaact gggattagat 1080 accccactat gcttagccct aaacctcaac agttaaatca acaaaactgc tcgccagaac 1140 actacgagcc acagcttaaa actcaaagga cctggcggtg cttcatatcc ctctagagga 1200 gcctgttctg taatcgataa accccgatca acctcaccac cccttgctca gcctatatac 1260 cgccatcttc agcaaaccct gatgaaggct acaaagtaag cgcaagtacc cacgtaaaga 1320 cgttaggtca aggtgtagcc catgaggtgg caagaaatgg gctacatttt ctaccccaga 1380 aaactacgat agcccttatg aaacttaagg gtcgaaggtg gatttagcag taaactgaga 1440 gtagagtgct tagttgaaca gggccctgaa gcgcgtacac accgcccgtc accctcctca 1500 agtatacttc aaaggacatt taactaaaac ccctacgcat ttatatagag gagacaagtc 1560 gtaacatggt aagtgtactg gaaagtgcac ttggacgaac cagagtgtag cttaacacaa 1620 agcacccaac ttacacttag gagatttcaa cttaacttga ccgctctgag ctaaacctag 1680 ccccaaaccc actccacctt actaccagac aaccttagcc aaaccattta cccaaataaa 1740 gtataggcga tagaaattga aacctggcgc aatagatata gtaccgcaag ggaaagatga 1800 aaaattataa ccaagcataa tatagcaagg actaacccct ataccttctg cataatgaat 1860 taactagaaa taactttgca aggagagcca aagctaagac ccccgaaacc agacgagcta 1920 cctaagaaca gctaaaagag cacacccgtc tatgtagcaa aatagtggga agatttatag 1980 gtagaggcga caaacctacc gagcctggtg atagctggtt gtccaagata gaatcttagt 2040 tcaactttaa atttgcccac agaaccctct aaatcccctt gtaaatttaa ctgttagtcc 2100 aaagaggaac agctctttgg acactaggaa aaaaccttgt agagagagta aaaaatttaa 2160 cacccatagt aggcctaaaa gcagccacca attaagaaag cgttcaagct caacacccac 2220 tacctaaaaa atcccaaaca tataactgaa ctcctcacac ccaattggac caatctatca 2280 ccctatagaa gaactaatgt tagtataagt aacatgaaaa cattctcctc cgcataagcc 2340 tgcgtcagat taaaacactg aactgacaat taacagccca atatctacaa tcaaccaaca 2400 agtcattatt accctcactg tcaacccaac acaggcatgc tcataaggaa aggttaaaaa 2460 aagtaaaagg aactcggcaa atcttacccc gcctgtttac caaaaacatc acctctagca 2520 tcaccagtat tagaggcacc gcctgcccag tgacacatgt ttaacggccg cggtacccta 2580 accgtgcaaa ggtagcataa tcacttgttc cttaaatagg gacctgtatg aatggctcca 2640 cgagggttca gctgtctctt acttttaacc agtgaaattg acctgcccgt gaagaggcgg 2700 gcatgacaca gcaagacgag aagaccctat ggagctttaa tttattaatg caaacaatac 2760 ctaacaaacc cacaggtcct aaactaccaa acctgcatta aaaatttcgg ttggggcgac 2820 ctcggagcag aaccaaacct ccgagcagta catgctaaga cttcaccagt caaagcgaac 2880 taccatactc aattgatcca ataacttgac caacggaaca agttacccta gggataacag 2940 cgcaatccta ttctagagtc catatcaaca atagggttta cgacctcgat gttggatcag 3000 gacatcccga tggtgcagcc gctattaaag gttcgtttgt tcaacgatta aagtcctacg 3060 tgatctgagt tcagaccgga gtaatccagg tcggtttcta tctacttcaa attcctccct 3120 gtacgaaagg acaagagaaa taaggcctac ttcacaaagc gccttccccc gtaaatgata 3180 tcatctcaac ttagtattat acccacaccc acccaagaac agggtttgtt aagatggcag 3240 agcccggtaa tcgcataaaa cttaaaactt tacagtcaga ggttcaattc ctcttcttaa 3300 caacataccc atggccaacc tcctactcct cattgtaccc attctaatcg caatggcatt 3360 cctaatgctt accgaacgaa aaattctagg ctatatacaa ctacgcaaag gccccaacgt 3420 tgtaggcccc tacgggctac tacaaccctt cgctgacgcc ataaaactct tcaccaaaga 3480 gcccctaaaa cccgccacat ctaccatcac cctatacatc accgccccga ccttagctct 3540 caccatcgct cttctactat gaacccccct ccccataccc aaccccctgg ttaacctcaa 3600 cctaggcctc ctatttattc tagccacctc tagcctagcc gtttactcaa tcctctgatc 3660 agggtgagca tcaaactcaa actacgccct gatcggcgca ctgcgagcag tagcccaaac 3720 aatctcatat gaagtcaccc tagccatcat tctactatca acattactaa taagtggctc 3780 ctttaacctc tccaccctta tcacaacaca agaacacctc tgattactcc tgccatcatg 3840 acccttggcc ataatatgat ttatctccac actagcagag accaaccgaa cccccttcga 3900 ccttgccgaa ggggagtccg aactagtctc aggcttcaac atcgaatacg ccgcaggccc 3960 cttcgcccta ttcttcatag ccgaatacac aaacattatt ataataaaca ccctcaccac 4020 tacaatcttc ctaggaacaa catatgacgc actctcccct gaactctaca caacatattt 4080 tgtcaccaag accctacttc tgacctccct gttcttatga attcgaacag catacccccg 4140 attccgctac gaccaactca tacacctcct atgaaaaaac ttcctaccac tcaccctagc 4200 attacttata tgatatgtct ccatacccat tacaatctcc agcattcccc ctcaaaccta 4260 agaaatatgt ctgataaaag agttactttg atagagtaaa taataggagt ttaaaccccc 4320 ttatttctag gactatgaga atcgaaccca tccctgagaa tccaaaattc tccgtgccac 4380 ctatcacacc ccatcctaaa gtaaggtcag ctaaataagc tatcgggccc ataccccgaa 4440 aatgttggtt atacccttcc cgtactaatt aatcccctgg cccaacccgt catctactct 4500 accatctttg caggcacact catcacagcg ctaagctcac actgattttt tacctgagta 4560 ggcctagaaa taaacatgct agcctttatt ccagttctaa ccaaaaaaat aaaccctcgt 4620 tccacagaag ctgccatcaa gtatttcctc acgcaagcaa ccgcatccat aatccttcta 4680 atagctatcc tcttcaacaa tatactctcc ggacaatgaa ccataaccaa tactaccaat 4740 caatactcat cattaataat cataatggct atagcaataa aactaggaat agcccccttt 4800 cacttctgag tcccagaggt tacccaaggc acccctctga catccggcct gcttcttctc 4860 acatgacaaa aactagcccc catctcaatc atataccaaa tctccccctc actaaacgta 4920 agccttctcc tcactctctc aatcttatcc atcatagcag gcagttgagg tggattaaac 4980 caaacccagc tacgcaaaat cttagcatac tcctcaatta cccacatagg atgaataata 5040 gcagttctac cgtacaaccc taacataacc attcttaatt taactattta tattatccta 5100 actactaccg cattcctact actcaactta aactccagca ccacgaccct actactatct 5160 cgcacctgaa acaagctaac atgactaaca cccttaattc catccaccct cctctcccta 5220 ggaggcctgc ccccgctaac cggctttttg cccaaatggg ccattatcga agaattcaca 5280 aaaaacaata gcctcatcat ccccaccatc atagccacca tcaccctcct taacctctac 5340 ttctacctac gcctaatcta ctccacctca atcacactac tccccatatc taacaacgta 5400 aaaataaaat gacagtttga acatacaaaa cccaccccac tcctccccac actcatcgcc 5460 cttaccacgc tactcctacc tatctcccct tttatactaa taatcttata gaaatttagg 5520 ttaaatacag accaagagcc ttcaaagccc tcagtaagtt gcaatactta atttctgtaa 5580 cagctaagga ctgcaaaacc ccactctgca tcaactgaac gcaaatcagc cactttaatt 5640 aagctaagcc cttactagac caatgggact taaacccaca aacacttagt taacagctaa 5700 gcaccctaat caactggctt caatctactt ctcccgccgc cgggaaaaaa ggcgggagaa 5760 gccccggcag gtttgaagct gcttcttcga atttgcaatt caatatgaga atcacctcgg 5820 agctggtaaa aagaggccta acccctgtct ttagatttac agtccaatgc ttcactcagc 5880 cattttacct cacccccact gatgttcgcc gaccgttgac tattctctac aaaccacaaa 5940 gacattggaa cactatacct attattcggc gcatgagctg gagtcctagg cacagctcta 6000 agcctcctta ttcgagccga gctgggccag ccaggcaacc ttctaggtaa cgaccacatc 6060 tacaacgtta tcgtcacagc ccatgcattt gtaataatct tcttcatagt aatacccatc 6120 ataatcggag gctttggcaa ctgactagtt cccctaataa tcggtgcccc cgatatggcg 6180 ttcccccgca taaacaacat aagcttctga ctcttacctc cctctctcct actcctgctc 6240 gcatctgcta tagtggaggc cggagcagga acaggttgaa cagtctaccc tcccttagca 6300 gggaactact cccaccctgg agcctccgta gacctaacca tcttctcctt acacctagca 6360 ggtgtctcct ctatcttagg ggccatcaat ttcatcacaa caattatcaa tataaaaccc 6420 cctgccataa cccaatacca aacgcccctc ttcgtctgat ccgtcctaat cacagcagtc 6480 ctacttctcc tatctctccc agtcctagct gctggcatca ctatactact aacagaccgc 6540 aacctcaaca ccaccttctt cgaccccgcc ggaggaggag accccattct ataccaacac 6600 ctattctgat ttttcggtca ccctgaagtt tatattctta tcctaccagg cttcggaata 6660 atctcccata ttgtaactta ctactccgga aaaaaagaac catttggata cataggtatg 6720 gtctgagcta tgatatcaat tggcttccta gggtttatcg tgtgagcaca ccatatattt 6780 acagtaggaa tagacgtaga cacacgagca tatttcacct ccgctaccat aatcatcgct 6840 atccccaccg gcgtcaaagt atttagctga ctcgccacac tccacggaag caatatgaaa 6900 tgatctgctg cagtgctctg agccctagga ttcatttttc ttttcaccgt aggtggcctg 6960 actggcattg tattagcaaa ctcatcacta gacatcgtac tacacgacac gtactacgtt 7020 gtagctcact tccactatgt cctatcaata ggagctgtat ttgccatcat aggaggcttc 7080 attcactgat ttcccctatt ctcaggctac accctagacc aaacctacgc caaaatccat 7140 ttcgctatca tattcatcgg cgtaaatcta actttcttcc cacaacactt tctcggccta 7200 tccggaatgc cccgacgtta ctcggactac cccgatgcat acaccacatg aaatgtccta 7260 tcatctgtag gctcattcat ttctctaaca gcagtaatat taataatttt catgatttga 7320 gaagccttcg cttcgaagcg aaaagtccta atagtagaag aaccctccat aaacctggag 7380 tgactatatg gatgcccccc accctaccac acattcgaag aacccgtata cataaaatct 7440 agacaaaaaa ggaaggaatc gaacccccca aagctggttt caagccaacc ccatggcctc 7500 catgactttt tcaaaaagat attagaaaaa ccatttcata actttgtcaa agttaaatta 7560 taggctaaat cctatatatc ttaatggcac atgcagcgca agtaggtcta caagacgcta 7620 cttcccctat catagaagag cttatcacct ttcatgatca cgccctcata atcattttcc 7680 ttatctgctt cctagtcctg tatgcccttt tcctaacact cacaacaaaa ctaactaata 7740 ctaacatctc agacgctcag gaaatagaaa ccgtctgaac tatcctgccc gccatcatcc 7800 tagtcctcat cgccctccca tccctacgca tcctttacat aacagacgag gtcaacgatc 7860 cctcccttac catcaaatca attggccacc aatggtactg aacctacgag tacaccgact 7920 acggcggact aatcttcaac tcctacatac ttcccccatt attcctagaa ccaggcgacc 7980 tgcgactcct tgacgttgac aatcgagtag tactcccgat tgaagccccc attcgtataa 8040 taattacatc acaagacgtc ttgcactcat gagctgtccc cacattaggc ttaaaaacag 8100 atgcaattcc cggacgtcta aaccaaacca ctttcaccgc tacacgaccg ggggtatact 8160 acggtcaatg ctctgaaatc tgtggagcaa accacagttt catgcccatc gtcctagaac 8220 taattcccct aaaaatcttt gaaatagggc ccgtatttac cctatagcac cccctctacc 8280 ccctctagag cccactgtaa agctaactta gcattaacct tttaagttaa agattaagag 8340 aaccaacacc tctttacagt gaaatgcccc aactaaatac taccgtatgg cccaccataa 8400 ttacccccat actccttaca ctattcctca tcacccaact aaaaatatta aacacaaact 8460 accacttacc tccctcacca aagcccataa aaataaaaaa ttataacaaa ccctgagaac 8520 caaaatgaac gaaaatctgt tcgcttcatt cattgccccc acaatcctag gcctacccgc 8580 cgcagtactg atcattctat ttccccctct attgatcccc acctccaaat atctcatcaa 8640 caaccgacta attaccaccc aacaatgact aatcaaacta acctcaaaac aaatgatagc 8700 catacacaac actaaaggac gaacctgatc tcttatacta gtatccttaa tcatttttat 8760 tgccacaact aacctcctcg gactcctgcc tcactcattt acaccaacca cccaactatc 8820 tataaaccta gccatggcca tccccttatg agcgggcgca gtgattatag gctttcgctc 8880 taagattaaa aatgccctag cccacttcct accacaaggt acacctacac cccttatccc 8940 catactagtt attatcgaaa ccatcagcct actcattcaa ccaatagccc tagccgtacg 9000 cctaaccgct aacattactg caggccacct actcatgcat ctaattggaa gcgccaccct 9060 agcaatatca accattaacc ttccctctac acttatcatc ttcacaattc taattctact 9120 gactatccta gaagtcgctg tcgccttaat ccaagcctac gttttcacac ttctagtaag 9180 cctctacctg cacgacaaca cataatgacc caccaatcac atgcctatca tatagtaaaa 9240 cccagcccat gacccctaac aggggccctc tcagccctcc taatgacctc cggcctagcc 9300 atgtgatttc acttccactc cataacgctc ctcatactag gcctgctaac caacacacta 9360 accatatacc aatgatggcg cgatgtaaca cgagaaagca cataccaagg ccaccacaca 9420 ccacctgtcc aaaaaggcct tcgatacggg ataatcctat ttattacctc agaagttttt 9480 ttcttcgcag gatttttctg agccttttac cactccagcc tagcccctac cccccaacta 9540 ggagggcact ggcccccaac aggcatcacc ccgctaaatc ccctagaagt cccactccta 9600 aacacatccg tattactcgc atcaggagta tcaatcacct gagctcacca tagtctaata 9660 gaaaacaacc gaaaccaaat aattcaagca ctgcttatta caattttact gggtctctat 9720 tttaccctcc tacaagcctc agagtacttc gagtctccct tcaccatttc cgacggcatc 9780 tacggctcaa cattttttgt agccacaggc ttccatggac ttcacgtcat tattggctca 9840 actttcctca ctatctgctt catccgccaa ctaatatttc actttacatc caaacatcac 9900 tttggcttcg aagccgccgc ctgatactgg cattttgtag atgtggtttg actatttctg 9960 tatgtctcca tctattgatg agggtcttac tcttttagta taaatagtac cgttaacttc 10020 caattaacta gttttgacaa cattcaaaaa agagtaataa acttcgcctt aattttaata 10080 atcaacaccc tcctagcctt actactaata attattacat tttgactacc acaactcaac 10140 ggctacatag aaaaatccac cccttacgag tgcggcttcg accctatatc ccccgcccgc 10200 gtccctttct ccataaaatt cttcttagta gctattacct tcttattatt tgatctagaa 10260 attgccctcc ttttacccct accatgagcc ctacaaacaa ctaacctgcc actaatagtt 10320 atgtcatccc tcttattaat catcatccta gccctaagtc tggcctatga gtgactacaa 10380 aaaggattag actgagccga attggtatat agtttaaaca aaacgaatga tttcgactca 10440 ttaaattatg ataatcatat ttaccaaatg cccctcattt acataaatat tatactggca 10500 tttaccatct cacttctagg aatactagta tatcgctcac acctcatatc ctccctacta 10560 tgcctagaag gaataatact atcgctattc attatagcta ctctcataac cctcaacacc 10620 cactccctct tagccaatat tgtgcctatt gccatactag tttttgccgc ctgcgaagca 10680 gcggtaggcc tagccctact agtctcaatc tccaacacat atggcctaga ctacgtacat 10740 aacctaaacc tactccaatg ctaaaactaa tcgtcccaac aattatatta ctaccactga 10800 catgactctc caaaaaacac ataatttgaa tcaacacaac cacccacagc ctaattatta 10860 gcatcatccc cctgctattt tttaaccaaa tcaacaacaa cctatttagc tgctccctaa 10920 ccttttcctc cgaccctcta acaacccccc tcctaatact aactacctga ctcctacccc 10980 tcacaatcat ggcaagccaa cgccacttat ccagtgaacc actatcacga aaaaaactct 11040 acctctctat actaatctcc ctacaaatct ccttaattat aacattcaca gccacagaac 11100 taatcatatt ttatatcttc ttcgaaacca cacttatccc caccttggct atcatcaccc 11160 gatgaggcaa ccagccagaa cgcctgaacg caggcacata cttcctattc tacaccctag 11220 taggctccct tcccctactc atcgcactaa tttacactca caacacccta ggctcactaa 11280 acattctact acttaccctc actgcccaag aactatcaaa ctcctgagcc aacaacttaa 11340 tatgactagc ttacacaata gcttttatag taaagatacc tctttacgga ctccacttat 11400 gactccctaa agcccatgtc gaagccccca tcgctgggtc aatagtactt gccgcagtac 11460 tcttaaaact aggcggctat ggtataatac gcctcacact cattctcaac cccctgacaa 11520 aacacatagc ctaccccttc cttgtactat ccctatgagg cataattata acaagctcca 11580 tctgcctacg acaaacagac ctaaaatcgc tcattgcata ctcttcaatc agccacatag 11640 ccctcgtagt gacagccatt ctcatccaaa ccccctgaag cttcaccggc gcagtcattc 11700 tcataatcgc ccacggactt acatcctcat tactattctg cctagcaaac tcaaactacg 11760 aacgcactca cagtcgcatc ataatcctct ctcaaggact tcaaactcta ctcccactaa 11820 tagctttttg atgacttcta gcaagcctcg ctaacctcgc cttacccccc actattaacc 11880 tactgggaga actctctgtg ctagtaacca cattctcctg atcaaatatc actctcctac 11940 ttacaggact caacatacta gtcacagccc tatactccct ctacatattt accacaacac 12000 aatgaggctc actcacccac cacattaaca acataaaacc ctcattcaca cgagaaaaca 12060 ccctcatatt catacaccta tcccccattc tcctcctatc cctcaacccc gacatcatta 12120 ccgggttttc ctcttgtaaa tatagtttaa ccaaaacatc agattgtgaa tctgacaaca 12180 gaggcttacg accccttatt taccgagaaa gctcacaaga actgctaact catgccccca 12240 tgtctaacaa catggctttc tcaactttta aaggataaca gctatccatt ggtcttaggc 12300 cccaaaaatt ttggtgcaac tccaaataaa agtaataacc atgcacacta ctataaccac 12360 cctaaccctg acttccctaa ttccccccat ccttaccacc ctcgttaacc ctaacaaaaa 12420 aaactcatac ccccattatg taaaatccat tgtcgcatcc acctttatta tcagtctctt 12480 ccccacaaca atattcatgt gcctagacca agaagttatt atctcgaact gacactgagc 12540 cacaacccaa acaacccagc tctccctaag cttcaaacta gactacttct ccataatatt 12600 catccctgta gcattgttcg ttacatggtc catcatagaa ttctcactgt gatatataaa 12660 ctcagaccca aacattaatc agttcttcaa atatctactc attttcctaa ttaccatact 12720 aatcttagtt accgctaaca acctattcca actgttcatc ggctgagagg gcgtaggaat 12780 tatatccttc ttgctcatca gttgatgata cgcccgagca gatgccaaca cagcagccat 12840 tcaagcaatc ctatacaacc gtatcggcga tatcggtttc atcctcgcct tagcatgatt 12900 tatcctacac tccaactcat gagacccaca acaaatagcc cttctaaacg ctaatccaag 12960 cctcacccca ctactaggcc tcctcctagc agcagcaggc aaatcagccc aattaggcct 13020 ccacccctga ctcccctcag ccatagaagg ccccacccca gtctcagccc tactccactc 13080 aagcactata gttgtagcag gagtcttctt actcatccgc ttccaccccc tagcagaaaa 13140 tagcccacta atccaaactc taacactatg cttaggcgct atcaccactc tgttcgcagc 13200 agtctgcgcc cttacacaaa atgacatcaa aaaaatcgta gccttctcca cttcaagtca 13260 actaggactc atagtagtta caatcggcat caaccaacca cacctagcat tcctgcacat 13320 ctgtacccac gccttcttca aagccatact atttatgtgc tccgggtcca tcatccacaa 13380 ccttaacaat gaacaagata ttcgaaaaat aggaggacta ctcaaaacca tacctctcac 13440 ttcaacctcc ctcaccattg gcagcctagc attagcagga atacctttcc tcacaggttt 13500 ctattccaaa gaccacatca tcgaaaccgc aaacatatca tacacaaacg cctgagccct 13560 atctattact ctcatcgcta cctccctaac aagcgcctat agcactcgaa taattcttct 13620 caccctaaca ggtcaacctc gcttccctac ccttactaac attaacgaaa ataaccccac 13680 cctactaaac cccattaaac gcctggcagc cggaagccta ttcgcaggat ttctcattac 13740 taacaacatt tcccccgcat cccccttcca aacaacaatc cccctctacc taaaactcac 13800 agccctcgct gtcactctcc taggacttct aacagcccta gacctcaact acctaaccaa 13860 caaacttaaa ataaaatccc cactatgcac attttatttc tccaacatac tcggattcta 13920 ccctaccatc acacaccgca caatccccta tctaggcctt cttacgagcc aaaacctgcc 13980 cctactcctc ctagacctaa cctgactaga aaagctacta cctaaaacaa tttcacagca 14040 ccaaatctcc acctccatca tcacctcaac ccaaaaaggc ataattaaac tttacttcct 14100 ctctttcttc ttcccactca tcctaaccct actcctaatc acataaccta ttcccccgag 14160 caatctcaat tacaatatac acaccaacaa acaatgttca accagtaact actactaatc 14220 aacgcccata atcatacaaa gcccccgcac caataggatc ctcccgaatc aaccctgacc 14280 cctctccttc ataaattatt cagcttccta cactattaaa gtttaccaca accaccaccc 14340 catcatactc tttcacccac agcaccaacc ccacctccat cgctaacccc actaaaacac 14400 tcaccaagac ctcaacccct gacccccatg cctcaggata ctcctcaata gccatcgctg 14460 tagtatatcc aaagacaacc atcattcccc ctaaataaat taaaaaaact attaaaccca 14520 tataacctcc cccaaaattc agaataataa cacacccgac cacaccgcta acaatcaata 14580 ctaaaccccc ataaatagga gaaggcttag aagaaaaccc cacaaacccc attactaaac 14640 ccacactcaa cagaaacaaa gcatacatca ttattctcgc acggactaca accacgacca 14700 atgatatgaa aaaccatcgt tgtatttcaa ctacaagaac accaatgacc ccaatacgca 14760 aaattaaccc cctaataaaa ttaattaacc actcattcat cgacctcccc accccatcca 14820 acatctccgc atgatgaaac ttcggctcac tccttggcgc ctgcctgatc ctccaaatca 14880 ccacaggact attcctagcc atgcactact caccagacgc ctcaaccgcc ttttcatcaa 14940 tcgcccacat cactcgagac gtaaattatg gctgaatcat ccgctacctt cacgccaatg 15000 gcgcctcaat attctttatc tgcctcttcc tacacatcgg gcgaggccta tattacggat 15060 catttctcta ctcagaaacc tgaaacatcg gcattatcct cctgcttgca actatagcaa 15120 cagccttcat aggctatgtc ctcccgtgag gccaaatatc attctgaggg gccacagtaa 15180 ttacaaactt actatccgcc atcccataca ttgggacaga cctagttcaa tgaatctgag 15240 gaggctactc agtagacagt cccaccctca cacgattctt tacctttcac ttcatcttgc 15300 ccttcattat tgcagcccta gcagcactcc acctcctatt cttgcacgaa acgggatcaa 15360 acaaccccct aggaatcacc tcccattccg ataaaatcac cttccaccct tactacacaa 15420 tcaaagacgc cctcggctta cttctcttcc ttctctcctt aatgacatta acactattct 15480 caccagacct cctaggcgac ccagacaatt ataccctagc caacccctta aacacccctc 15540 cccacatcaa gcccgaatga tatttcctat tcgcctacac aattctccga tccgtcccta 15600 acaaactagg aggcgtcctt gccctattac tatccatcct catcctagca ataatcccca 15660 tcctccatat atccaaacaa caaagcataa tatttcgccc actaagccaa tcactttatt 15720 gactcctagc cgcagacctc ctcattctaa cctgaatcgg aggacaacca gtaagctacc 15780 cttttaccat cattggacaa gtagcatccg tactatactt cacaacaatc ctaatcctaa 15840 taccaactat ctccctaatt gaaaacaaaa tactcaaatg ggcctgtcct tgtagtataa 15900 actaatacac cagtcttgta aaccggagat gaaaaccttt ttccaaggac aaatcagaga 15960 aaaagtcttt aactccacca ttagcaccca aagctaagat tctaatttaa actattctct 16020 gttctttcat ggggaagcag atttgggtac cacccaagta ttgactcacc catcaacaac 16080 cgctatgtat ctcgtacatt actgccagcc accatgaata ttgtacggta ccataaatac 16140 ttgaccacct gtagtacata aaaccccaac ccacatcaaa accctccccc catgcttaca 16200 agcaagcaca gtaatcaacc ttcaactgtc acacatcaac tgcaactcca aagccacccc 16260 tcacccacta ggatatcaac aaacctacgc acccttaaca gtacatagca cataaagcca 16320 tttaccgtac atagcacatt acagtcaaat cccttctcgt ccccatggat gacccccctc 16380 agataggggt cccttgacca ccatcctccg tgaaatcaat atcccgcaca agagtgctac 16440 tctcctcgct ccgggcccat aacacttggg ggtagctaaa gtgaactgta tccgacatct 16500 ggttcctact tcagggccat aaagcctaaa tagcccacac gttcccctta aataagacat 16560 cacgatg 16567 // ID KC345797; SV 1; circular; genomic DNA; STD; HUM; 16567 BP. XX AC KC345797; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT6_190 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16567 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16567 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; b6dcc73fb91087dd82a9d3d817ce7501. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16567 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT6_190" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="||Ani" FT /db_xref="taxon:9606" FT /haplogroup="L0k" FT D-loop complement(join(16022..16567,1..575)) FT tRNA 576..646 FT /product="tRNA-Phe" FT rRNA 647..1600 FT /product="12S ribosomal RNA" FT tRNA 1601..1669 FT /product="tRNA-Val" FT rRNA 1670..3227 FT /product="16S ribosomal RNA" FT tRNA 3228..3302 FT /product="tRNA-Leu" FT gene 3305..4260 FT /gene="ND1" FT CDS 3305..4260 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4259..4260,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82316.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPITISSIPPQT" FT tRNA 4261..4329 FT /product="tRNA-Ile" FT tRNA complement(4327..4398) FT /product="tRNA-Gln" FT tRNA 4400..4467 FT /product="tRNA-Met" FT gene 4468..5509 FT /gene="ND2" FT CDS 4468..5509 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5509,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82317.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5510..5574 FT /product="tRNA-Trp" FT tRNA complement(5585..5653) FT /product="tRNA-Ala" FT tRNA complement(5655..5727) FT /product="tRNA-Asn" FT tRNA complement(5759..5824) FT /product="tRNA-Cys" FT tRNA complement(5824..5889) FT /product="tRNA-Tyr" FT gene 5902..7443 FT /gene="COX1" FT CDS 5902..7443 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B2U9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B2U9" FT /protein_id="AGD82318.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNVLSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7443..7514) FT /product="tRNA-Ser" FT tRNA 7516..7583 FT /product="tRNA-Asp" FT gene 7584..8267 FT /gene="COX2" FT CDS 7584..8267 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /protein_id="AGD82319.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8293..8362 FT /product="tRNA-Lys" FT gene 8364..8570 FT /gene="ATP8" FT CDS 8364..8570 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82320.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8525..9205 FT /gene="ATP6" FT CDS 8525..9205 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B1L8" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B1L8" FT /protein_id="AGD82321.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEVAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9205..9988 FT /gene="COX3" FT CDS 9205..9988 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9988,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82322.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9989..10056 FT /product="tRNA-Gly" FT gene 10057..10402 FT /gene="ND3" FT CDS 10057..10402 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10402,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82323.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWAE" FT tRNA 10403..10467 FT /product="tRNA-Arg" FT gene 10468..10764 FT /gene="ND4L" FT CDS 10468..10764 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AGD82324.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10758..12135 FT /gene="ND4" FT CDS 10758..12135 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12135,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9B1S7" FT /db_xref="InterPro:IPR000260" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="InterPro:IPR010227" FT /db_xref="UniProtKB/TrEMBL:Q9B1S7" FT /protein_id="AGD82325.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSLTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12136..12204 FT /product="tRNA-His" FT tRNA 12205..12263 FT /product="tRNA-Ser" FT tRNA 12264..12334 FT /product="tRNA-Leu" FT gene 12335..14146 FT /gene="ND5" FT CDS 12335..14146 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q9B1F8" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q9B1F8" FT /protein_id="AGD82326.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPASPFQTTIPLYLKLTALAVTLLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPTITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14147..14671) FT /gene="ND6" FT CDS complement(14147..14671) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82327.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14672..14740) FT /product="tRNA-Glu" FT gene 14745..15885 FT /gene="CYTB" FT CDS 14745..15885 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15885,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q6VJ80" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q6VJ80" FT /protein_id="AGD82328.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15886..15951 FT /product="tRNA-Thr" FT tRNA complement(15953..16021) FT /product="tRNA-Pro" XX SQ Sequence 16567 BP; 5117 A; 5184 C; 2177 G; 4089 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcgagc atacctatta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tattttcccc tcccactccc atactactaa 480 tctcatcaat acaacccccg cccatcctac ccagcacaca caccgctgct aaccccatac 540 cccgaaccaa ccaaacccca aagacacccc ccacagttta tgtagcttac ctcctcaaag 600 caatacactg aaaatgttta gacgggctca catcacccca taaacaaata ggtttggtcc 660 tagcctttct attagctctt agtaagatta cacatgcaag catccccgtt ccagtgagtt 720 caccctctaa atcaccacga tcaaaaggga caagcatcaa gcacgcaaca atgcagctca 780 aaacgcttag cctagccaca cccccacggg aaacagcagt gataaacctt tagcaataaa 840 cgaaagttca actaagctat actaacccca gggttggtca atttcgtgcc agccaccgcg 900 gtcacacgat taacccaagt caatagaagc cggcgtaaag agtgttttag atcaccccct 960 ccccaataaa gctaaaactc acctgagttg taaaaaactc cagttgacac aaaataaact 1020 acgaaagtgg ctttaacata tctgaataca caatagctaa gacccaaact gggattagat 1080 accccactat gcttagccct aaacctcaac agttaaatca acaaaactgc tcgccagaac 1140 actacgagcc acagcttaaa actcaaagga cctggcggtg cttcatatcc ctctagagga 1200 gcctgttctg taatcgataa accccgatca acctcaccac cccttgctca gcctatatac 1260 cgccatcttc agcaaaccct gatgaaggct acaaagtaag cgcaagtacc cacgtaaaga 1320 cgttaggtca aggtgtagcc catgaggtgg caagaaatgg gctacatttt ctaccccaga 1380 aaactacgat agcccttatg aaacttaagg gtcgaaggtg gatttagcag taaactgaga 1440 gtagagtgct tagttgaaca gggccctgaa gcgcgtacac accgcccgtc accctcctca 1500 agtatacttc aaaggacatt taactaaaac ccctacgcat ttatatagag gagacaagtc 1560 gtaacatggt aagtgtactg gaaagtgcac ttggacgaac cagagtgtag cttaacacaa 1620 agcacccaac ttacacttag gagatttcaa cttaacttga ccgctctgag ctaaacctag 1680 ccccaaaccc actccacctt actaccagac aaccttagcc aaaccattta cccaaataaa 1740 gtataggcga tagaaattga aacctggcgc aatagatata gtaccgcaag ggaaagatga 1800 aaaattataa ccaagcataa tatagcaagg actaacccct ataccttctg cataatgaat 1860 taactagaaa taactttgca aggagagcca aagctaagac ccccgaaacc agacgagcta 1920 cctaagaaca gctaaaagag cacacccgtc tatgtagcaa aatagtggga agatttatag 1980 gtagaggcga caaacctacc gagcctggtg atagctggtt gtccaagata gaatcttagt 2040 tcaactttaa atttgcccac agaaccctct aaatcccctt gtaaatttaa ctgttagtcc 2100 aaagaggaac agctctttgg acactaggaa aaaaccttgt agagagagta aaaaatttaa 2160 cacccatagt aggcctaaaa gcagccacca attaagaaag cgttcaagct caacacccac 2220 tacctaaaaa atcccaaaca tataactgaa ctcctcacac ccaattggac caatctatca 2280 ccctatagaa gaactaatgt tagtataagt aacatgaaaa cattctcctc cgcataagcc 2340 tgcgtcagat taaaacactg aactgacaat taacagccca atatctacaa tcaaccaaca 2400 agtcattatt accctcactg tcaacccaac acaggcatgc tcataaggaa aggttaaaaa 2460 aagtaaaagg aactcggcaa atcttacccc gcctgtttac caaaaacatc acctctagca 2520 tcaccagtat tagaggcacc gcctgcccag tgacacatgt ttaacggccg cggtacccta 2580 accgtgcaaa ggtagcataa tcacttgttc cttaaatagg gacctgtatg aatggctcca 2640 cgagggttca gctgtctctt acttttaacc agtgaaattg acctgcccgt gaagaggcgg 2700 gcatgacaca gcaagacgag aagaccctat ggagctttaa tttattaatg caaacaatac 2760 ctaacaaacc cacaggtcct aaactaccaa acctgcatta aaaatttcgg ttggggcgac 2820 ctcggagcag aaccaaacct ccgagcagta catgctaaga cttcaccagt caaagcgaac 2880 taccatactc aattgatcca ataacttgac caacggaaca agttacccta gggataacag 2940 cgcaatccta ttctagagtc catatcaaca atagggttta cgacctcgat gttggatcag 3000 gacatcccga tggtgcagcc gctattaaag gttcgtttgt tcaacgatta aagtcctacg 3060 tgatctgagt tcagaccgga gtaatccagg tcggtttcta tctacttcaa attcctccct 3120 gtacgaaagg acaagagaaa taaggcctac ttcacaaagc gccttccccc gtaaatgata 3180 tcatctcaac ttagtattat acccacaccc acccaagaac agggtttgtt aagatggcag 3240 agcccggtaa tcgcataaaa cttaaaactt tacagtcaga ggttcaattc ctcttcttaa 3300 caacataccc atggccaacc tcctactcct cattgtaccc attctaatcg caatggcatt 3360 cctaatgctt accgaacgaa aaattctagg ctatatacaa ctacgcaaag gccccaacgt 3420 tgtaggcccc tacgggctac tacaaccctt cgctgacgcc ataaaactct tcaccaaaga 3480 gcccctaaaa cccgccacat ctaccatcac cctatacatc accgccccga ccttagctct 3540 caccatcgct cttctactat gaacccccct ccccataccc aaccccctgg ttaacctcaa 3600 cctaggcctc ctatttattc tagccacctc tagcctagcc gtttactcaa tcctctgatc 3660 agggtgagca tcaaactcaa actacgccct gatcggcgca ctgcgagcag tagcccaaac 3720 aatctcatat gaagtcaccc tagccatcat tctactatca acattactaa taagtggctc 3780 ctttaacctc tccaccctta tcacaacaca agaacacctc tgattactcc tgccatcatg 3840 acccttggcc ataatatgat ttatctccac actagcagag accaaccgaa cccccttcga 3900 ccttgccgaa ggggagtccg aactagtctc aggcttcaac atcgaatacg ccgcaggccc 3960 cttcgcccta ttcttcatag ccgaatacac aaacattatt ataataaaca ccctcaccac 4020 tacaatcttc ctaggaacaa catatgacgc actctcccct gaactctaca caacatattt 4080 tgtcaccaag accctacttc tgacctccct gttcttatga attcgaacag catacccccg 4140 attccgctac gaccaactca tacacctcct atgaaaaaac ttcctaccac tcaccctagc 4200 attacttata tgatatgtct ccatacccat tacaatctcc agcattcccc ctcaaaccta 4260 agaaatatgt ctgataaaag agttactttg atagagtaaa taataggagt ttaaaccccc 4320 ttatttctag gactatgaga atcgaaccca tccctgagaa tccaaaattc tccgtgccac 4380 ctatcacacc ccatcctaaa gtaaggtcag ctaaataagc tatcgggccc ataccccgaa 4440 aatgttggtt atacccttcc cgtactaatt aatcccctgg cccaacccgt catctactct 4500 accatctttg caggcacact catcacagcg ctaagctcac actgattttt tacctgagta 4560 ggcctagaaa taaacatgct agcctttatt ccagttctaa ccaaaaaaat aaaccctcgt 4620 tccacagaag ctgccatcaa gtatttcctc acgcaagcaa ccgcatccat aatccttcta 4680 atagctatcc tcttcaacaa tatactctcc ggacaatgaa ccataaccaa tactaccaat 4740 caatactcat cattaataat cataatggct atagcaataa aactaggaat agcccccttt 4800 cacttctgag tcccagaggt tacccaaggc acccctctga catccggcct gcttcttctc 4860 acatgacaaa aactagcccc catctcaatc atataccaaa tctccccctc actaaacgta 4920 agccttctcc tcactctctc aatcttatcc atcatagcag gcagttgagg tggattaaac 4980 caaacccagc tacgcaaaat cttagcatac tcctcaatta cccacatagg atgaataata 5040 gcagttctac cgtacaaccc taacataacc attcttaatt taactattta tattatccta 5100 actactaccg cattcctact actcaactta aactccagca ccacgaccct actactatct 5160 cgcacctgaa acaagctaac atgactaaca cccttaattc catccaccct cctctcccta 5220 ggaggcctgc ccccgctaac cggctttttg cccaaatggg ccattatcga agaattcaca 5280 aaaaacaata gcctcatcat ccccaccatc atagccacca tcaccctcct taacctctac 5340 ttctacctac gcctaatcta ctccacctca atcacactac tccccatatc taacaacgta 5400 aaaataaaat gacagtttga acatacaaaa cccaccccac tcctccccac actcatcgcc 5460 cttaccacgc tactcctacc tatctcccct tttatactaa taatcttata gaaatttagg 5520 ttaaatacag accaagagcc ttcaaagccc tcagtaagtt gcaatactta atttctgtaa 5580 cagctaagga ctgcaaaacc ccactctgca tcaactgaac gcaaatcagc cactttaatt 5640 aagctaagcc cttactagac caatgggact taaacccaca aacacttagt taacagctaa 5700 gcaccctaat caactggctt caatctactt ctcccgccgc cgggaaaaaa ggcgggagaa 5760 gccccggcag gtttgaagct gcttcttcga atttgcaatt caatatgaga atcacctcgg 5820 agctggtaaa aagaggccta acccctgtct ttagatttac agtccaatgc ttcactcagc 5880 cattttacct cacccccact gatgttcgcc gaccgttgac tattctctac aaaccacaaa 5940 gacattggaa cactatacct attattcggc gcatgagctg gagtcctagg cacagctcta 6000 agcctcctta ttcgagccga gctgggccag ccaggcaacc ttctaggtaa cgaccacatc 6060 tacaacgtta tcgtcacagc ccatgcattt gtaataatct tcttcatagt aatacccatc 6120 ataatcggag gctttggcaa ctgactagtt cccctaataa tcggtgcccc cgatatggcg 6180 ttcccccgca taaacaacat aagcttctga ctcttacctc cctctctcct actcctgctc 6240 gcatctgcta tagtggaggc cggagcagga acaggttgaa cagtctaccc tcccttagca 6300 gggaactact cccaccctgg agcctccgta gacctaacca tcttctcctt acacctagca 6360 ggtgtctcct ctatcttagg ggccatcaat ttcatcacaa caattatcaa tataaaaccc 6420 cctgccataa cccaatacca aacgcccctc ttcgtctgat ccgtcctaat cacagcagtc 6480 ctacttctcc tatctctccc agtcctagct gctggcatca ctatactact aacagaccgc 6540 aacctcaaca ccaccttctt cgaccccgcc ggaggaggag accccattct ataccaacac 6600 ctattctgat ttttcggtca ccctgaagtt tatattctta tcctaccagg cttcggaata 6660 atctcccata ttgtaactta ctactccgga aaaaaagaac catttggata cataggtatg 6720 gtctgagcta tgatatcaat tggcttccta gggtttatcg tgtgagcaca ccatatattt 6780 acagtaggaa tagacgtaga cacacgagca tatttcacct ccgctaccat aatcatcgct 6840 atccccaccg gcgtcaaagt atttagctga ctcgccacac tccacggaag caatatgaaa 6900 tgatctgctg cagtgctctg agccctagga ttcatttttc ttttcaccgt aggtggcctg 6960 actggcattg tattagcaaa ctcatcacta gacatcgtac tacacgacac gtactacgtt 7020 gtagctcact tccactatgt cctatcaata ggagctgtat ttgccatcat aggaggcttc 7080 attcactgat ttcccctatt ctcaggctac accctagacc aaacctacgc caaaatccat 7140 ttcgctatca tattcatcgg cgtaaatcta actttcttcc cacaacactt tctcggccta 7200 tccggaatgc cccgacgtta ctcggactac cccgatgcat acaccacatg aaatgtccta 7260 tcatctgtag gctcattcat ttctctaaca gcagtaatat taataatttt catgatttga 7320 gaagccttcg cttcgaagcg aaaagtccta atagtagaag aaccctccat aaacctggag 7380 tgactatatg gatgcccccc accctaccac acattcgaag aacccgtata cataaaatct 7440 agacaaaaaa ggaaggaatc gaacccccca aagctggttt caagccaacc ccatggcctc 7500 catgactttt tcaaaaagat attagaaaaa ccatttcata actttgtcaa agttaaatta 7560 taggctaaat cctatatatc ttaatggcac atgcagcgca agtaggtcta caagacgcta 7620 cttcccctat catagaagag cttatcacct ttcatgatca cgccctcata atcattttcc 7680 ttatctgctt cctagtcctg tatgcccttt tcctaacact cacaacaaaa ctaactaata 7740 ctaacatctc agacgctcag gaaatagaaa ccgtctgaac tatcctgccc gccatcatcc 7800 tagtcctcat cgccctccca tccctacgca tcctttacat aacagacgag gtcaacgatc 7860 cctcccttac catcaaatca attggccacc aatggtactg aacctacgag tacaccgact 7920 acggcggact aatcttcaac tcctacatac ttcccccatt attcctagaa ccaggcgacc 7980 tgcgactcct tgacgttgac aatcgagtag tactcccgat tgaagccccc attcgtataa 8040 taattacatc acaagacgtc ttgcactcat gagctgtccc cacattaggc ttaaaaacag 8100 atgcaattcc cggacgtcta aaccaaacca ctttcaccgc tacacgaccg ggggtatact 8160 acggtcaatg ctctgaaatc tgtggagcaa accacagttt catgcccatc gtcctagaac 8220 taattcccct aaaaatcttt gaaatagggc ccgtatttac cctatagcac cccctctacc 8280 ccctctagag cccactgtaa agctaactta gcattaacct tttaagttaa agattaagag 8340 aaccaacacc tctttacagt gaaatgcccc aactaaatac taccgtatgg cccaccataa 8400 ttacccccat actccttaca ctattcctca tcacccaact aaaaatatta aacacaaact 8460 accacttacc tccctcacca aagcccataa aaataaaaaa ttataacaaa ccctgagaac 8520 caaaatgaac gaaaatctgt tcgcttcatt cattgccccc acaatcctag gcctacccgc 8580 cgcagtactg atcattctat ttccccctct attgatcccc acctccaaat atctcatcaa 8640 caaccgacta attaccaccc aacaatgact aatcaaacta acctcaaaac aaatgatagc 8700 catacacaac actaaaggac gaacctgatc tcttatacta gtatccttaa tcatttttat 8760 tgccacaact aacctcctcg gactcctgcc tcactcattt acaccaacca cccaactatc 8820 tataaaccta gccatggcca tccccttatg agcgggcgca gtgattatag gctttcgctc 8880 taagattaaa aatgccctag cccacttcct accacaaggt acacctacac cccttatccc 8940 catactagtt attatcgaaa ccatcagcct actcattcaa ccaatagccc tagccgtacg 9000 cctaaccgct aacattactg caggccacct actcatgcat ctaattggaa gcgccaccct 9060 agcaatatca accattaacc ttccctctac acttatcatc ttcacaattc taattctact 9120 gactatccta gaagtcgctg tcgccttaat ccaagcctac gttttcacac ttctagtaag 9180 cctctacctg cacgacaaca cataatgacc caccaatcac atgcctatca tatagtaaaa 9240 cccagcccat gacccctaac aggggccctc tcagccctcc taatgacctc cggcctagcc 9300 atgtgatttc acttccactc cataacgctc ctcatactag gcctgctaac caacacacta 9360 accatatacc aatgatggcg cgatgtaaca cgagaaagca cataccaagg ccaccacaca 9420 ccacctgtcc aaaaaggcct tcgatacggg ataatcctat ttattacctc agaagttttt 9480 ttcttcgcag gatttttctg agccttttac cactccagcc tagcccctac cccccaacta 9540 ggagggcact ggcccccaac aggcatcacc ccgctaaatc ccctagaagt cccactccta 9600 aacacatccg tattactcgc atcaggagta tcaatcacct gagctcacca tagtctaata 9660 gaaaacaacc gaaaccaaat aattcaagca ctgcttatta caattttact gggtctctat 9720 tttaccctcc tacaagcctc agagtacttc gagtctccct tcaccatttc cgacggcatc 9780 tacggctcaa cattttttgt agccacaggc ttccatggac ttcacgtcat tattggctca 9840 actttcctca ctatctgctt catccgccaa ctaatatttc actttacatc caaacatcac 9900 tttggcttcg aagccgccgc ctgatactgg cattttgtag atgtggtttg actatttctg 9960 tatgtctcca tctattgatg agggtcttac tcttttagta taaatagtac cgttaacttc 10020 caattaacta gttttgacaa cattcaaaaa agagtaataa acttcgcctt aattttaata 10080 atcaacaccc tcctagcctt actactaata attattacat tttgactacc acaactcaac 10140 ggctacatag aaaaatccac cccttacgag tgcggcttcg accctatatc ccccgcccgc 10200 gtccctttct ccataaaatt cttcttagta gctattacct tcttattatt tgatctagaa 10260 attgccctcc ttttacccct accatgagcc ctacaaacaa ctaacctgcc actaatagtt 10320 atgtcatccc tcttattaat catcatccta gccctaagtc tggcctatga gtgactacaa 10380 aaaggattag actgagccga attggtatat agtttaaaca aaacgaatga tttcgactca 10440 ttaaattatg ataatcatat ttaccaaatg cccctcattt acataaatat tatactggca 10500 tttaccatct cacttctagg aatactagta tatcgctcac acctcatatc ctccctacta 10560 tgcctagaag gaataatact atcgctattc attatagcta ctctcataac cctcaacacc 10620 cactccctct tagccaatat tgtgcctatt gccatactag tttttgccgc ctgcgaagca 10680 gcggtaggcc tagccctact agtctcaatc tccaacacat atggcctaga ctacgtacat 10740 aacctaaacc tactccaatg ctaaaactaa tcgtcccaac aattatatta ctaccactga 10800 catgactctc caaaaaacac ataatttgaa tcaacacaac cacccacagc ctaattatta 10860 gcatcatccc cctgctattt tttaaccaaa tcaacaacaa cctatttagc tgctccctaa 10920 ccttttcctc cgaccctcta acaacccccc tcctaatact aactacctga ctcctacccc 10980 tcacaatcat ggcaagccaa cgccacttat ccagtgaacc actatcacga aaaaaactct 11040 acctctctat actaatctcc ctacaaatct ccttaattat aacattcaca gccacagaac 11100 taatcatatt ttatatcttc ttcgaaacca cacttatccc caccttggct atcatcaccc 11160 gatgaggcaa ccagccagaa cgcctgaacg caggcacata cttcctattc tacaccctag 11220 taggctccct tcccctactc atcgcactaa tttacactca caacacccta ggctcactaa 11280 acattctact acttaccctc actgcccaag aactatcaaa ctcctgagcc aacaacttaa 11340 tatgactagc ttacacaata gcttttatag taaagatacc tctttacgga ctccacttat 11400 gactccctaa agcccatgtc gaagccccca tcgctgggtc aatagtactt gccgcagtac 11460 tcttaaaact aggcggctat ggtataatac gcctcacact cattctcaac cccctgacaa 11520 aacacatagc ctaccccttc cttgtactat ccctatgagg cataattata acaagctcca 11580 tctgcctacg acaaacagac ctaaaatcgc tcattgcata ctcttcaatc agccacatag 11640 ccctcgtagt gacagccatt ctcatccaaa ccccctgaag cttcaccggc gcagtcattc 11700 tcataatcgc ccacggactt acatcctcat tactattctg cctagcaaac tcaaactacg 11760 aacgcactca cagtcgcatc ataatcctct ctcaaggact tcaaactcta ctcccactaa 11820 tagctttttg atgacttcta gcaagcctcg ctaacctcgc cttacccccc actattaacc 11880 tactgggaga actctctgtg ctagtaacca cattctcctg atcaaatatc actctcctac 11940 ttacaggact caacatacta gtcacagccc tatactccct ctacatattt accacaacac 12000 aatgaggctc actcacccac cacattaaca acataaaacc ctcattcaca cgagaaaaca 12060 ccctcatatt catacaccta tcccccattc tcctcctatc cctcaacccc gacatcatta 12120 ccgggttttc ctcttgtaaa tatagtttaa ccaaaacatc agattgtgaa tctgacaaca 12180 gaggcttacg accccttatt taccgagaaa gctcacaaga actgctaact catgccccca 12240 tgtctaacaa catggctttc tcaactttta aaggataaca gctatccatt ggtcttaggc 12300 cccaaaaatt ttggtgcaac tccaaataaa agtaataacc atgcacacta ctataaccac 12360 cctaaccctg acttccctaa ttccccccat ccttaccacc ctcgttaacc ctaacaaaaa 12420 aaactcatac ccccattatg taaaatccat tgtcgcatcc acctttatta tcagtctctt 12480 ccccacaaca atattcatgt gcctagacca agaagttatt atctcgaact gacactgagc 12540 cacaacccaa acaacccagc tctccctaag cttcaaacta gactacttct ccataatatt 12600 catccctgta gcattgttcg ttacatggtc catcatagaa ttctcactgt gatatataaa 12660 ctcagaccca aacattaatc agttcttcaa atatctactc attttcctaa ttaccatact 12720 aatcttagtt accgctaaca acctattcca actgttcatc ggctgagagg gcgtaggaat 12780 tatatccttc ttgctcatca gttgatgata cgcccgagca gatgccaaca cagcagccat 12840 tcaagcaatc ctatacaacc gtatcggcga tatcggtttc atcctcgcct tagcatgatt 12900 tatcctacac tccaactcat gagacccaca acaaatagcc cttctaaacg ctaatccaag 12960 cctcacccca ctactaggcc tcctcctagc agcagcaggc aaatcagccc aattaggcct 13020 ccacccctga ctcccctcag ccatagaagg ccccacccca gtctcagccc tactccactc 13080 aagcactata gttgtagcag gagtcttctt actcatccgc ttccaccccc tagcagaaaa 13140 tagcccacta atccaaactc taacactatg cttaggcgct atcaccactc tgttcgcagc 13200 agtctgcgcc cttacacaaa atgacatcaa aaaaatcgta gccttctcca cttcaagtca 13260 actaggactc atagtagtta caatcggcat caaccaacca cacctagcat tcctgcacat 13320 ctgtacccac gccttcttca aagccatact atttatgtgc tccgggtcca tcatccacaa 13380 ccttaacaat gaacaagata ttcgaaaaat aggaggacta ctcaaaacca tacctctcac 13440 ttcaacctcc ctcaccattg gcagcctagc attagcagga atacctttcc tcacaggttt 13500 ctattccaaa gaccacatca tcgaaaccgc aaacatatca tacacaaacg cctgagccct 13560 atctattact ctcatcgcta cctccctaac aagcgcctat agcactcgaa taattcttct 13620 caccctaaca ggtcaacctc gcttccctac ccttactaac attaacgaaa ataaccccac 13680 cctactaaac cccattaaac gcctggcagc cggaagccta ttcgcaggat ttctcattac 13740 taacaacatt tcccccgcat cccccttcca aacaacaatc cccctctacc taaaactcac 13800 agccctcgct gtcactctcc taggacttct aacagcccta gacctcaact acctaaccaa 13860 caaacttaaa ataaaatccc cactatgcac attttatttc tccaacatac tcggattcta 13920 ccctaccatc acacaccgca caatccccta tctaggcctt cttacgagcc aaaacctgcc 13980 cctactcctc ctagacctaa cctgactaga aaagctacta cctaaaacaa tttcacagca 14040 ccaaatctcc acctccatca tcacctcaac ccaaaaaggc ataattaaac tttacttcct 14100 ctctttcttc ttcccactca tcctaaccct actcctaatc acataaccta ttcccccgag 14160 caatctcaat tacaatatac acaccaacaa acaatgttca accagtaact actactaatc 14220 aacgcccata atcatacaaa gcccccgcac caataggatc ctcccgaatc aaccctgacc 14280 cctctccttc ataaattatt cagcttccta cactattaaa gtttaccaca accaccaccc 14340 catcatactc tttcacccac agcaccaacc ccacctccat cgctaacccc actaaaacac 14400 tcaccaagac ctcaacccct gacccccatg cctcaggata ctcctcaata gccatcgctg 14460 tagtatatcc aaagacaacc atcattcccc ctaaataaat taaaaaaact attaaaccca 14520 tataacctcc cccaaaattc agaataataa cacacccgac cacaccgcta acaatcaata 14580 ctaaaccccc ataaatagga gaaggcttag aagaaaaccc cacaaacccc attactaaac 14640 ccacactcaa cagaaacaaa gcatacatca ttattctcgc acggactaca accacgacca 14700 atgatatgaa aaaccatcgt tgtatttcaa ctacaagaac accaatgacc ccaatacgca 14760 aaattaaccc cctaataaaa ttaattaacc actcattcat cgacctcccc accccatcca 14820 acatctccgc atgatgaaac ttcggctcac tccttggcgc ctgcctgatc ctccaaatca 14880 ccacaggact attcctagcc atgcactact caccagacgc ctcaaccgcc ttttcatcaa 14940 tcgcccacat cactcgagac gtaaattatg gctgaatcat ccgctacctt cacgccaatg 15000 gcgcctcaat attctttatc tgcctcttcc tacacatcgg gcgaggccta tattacggat 15060 catttctcta ctcagaaacc tgaaacatcg gcattatcct cctgcttgca actatagcaa 15120 cagccttcat aggctatgtc ctcccgtgag gccaaatatc attctgaggg gccacagtaa 15180 ttacaaactt actatccgcc atcccataca ttgggacaga cctagttcaa tgaatctgag 15240 gaggctactc agtagacagt cccaccctca cacgattctt tacctttcac ttcatcttgc 15300 ccttcattat tgcagcccta gcagcactcc acctcctatt cttgcacgaa acgggatcaa 15360 acaaccccct aggaatcacc tcccattccg ataaaatcac cttccaccct tactacacaa 15420 tcaaagacgc cctcggctta cttctcttcc ttctctcctt aatgacatta acactattct 15480 caccagacct cctaggcgac ccagacaatt ataccctagc caacccctta aacacccctc 15540 cccacatcaa gcccgaatga tatttcctat tcgcctacac aattctccga tccgtcccta 15600 acaaactagg aggcgtcctt gccctattac tatccatcct catcctagca ataatcccca 15660 tcctccatat atccaaacaa caaagcataa tatttcgccc actaagccaa tcactttatt 15720 gactcctagc cgcagacctc ctcattctaa cctgaatcgg aggacaacca gtaagctacc 15780 cttttaccat cattggacaa gtagcatccg tactatactt cacaacaatc ctaatcctaa 15840 taccaactat ctccctaatt gaaaacaaaa tactcaaatg ggcctgtcct tgtagtataa 15900 actaatacac cagtcttgta aaccggagat gaaaaccttt ttccaaggac aaatcagaga 15960 aaaagtcttt aactccacca ttagcaccca aagctaagat tctaatttaa actattctct 16020 gttctttcat ggggaagcag atttgggtac cacccaagta ttgactcacc catcaacaac 16080 cgctatgtat ttcgtacatt actgccagcc accatgaata ttgtacggta ccataaatac 16140 ttgaccacct gtagtacata aaaccccaac ccacatcaaa accctccccc catgcttaca 16200 agcaagcaca gtaatcaacc ttcaactgtc acacatcaac tgcaactcca aagccacccc 16260 tcacccacta ggatatcaac aaacctacgc acccttaaca gtacatagca cataaagcca 16320 tttaccgtac atagcacatt acagtcaaat cccttctcgt ccccatggat gacccccctc 16380 agataggggt cccttgacca ccatcctccg tgaaatcaat atcccgcaca agagtgctac 16440 tctcctcgct ccgggcccat aacacttggg ggtagctaaa gtgaactgta tccgacatct 16500 ggttcctact tcagggccat aaagcctaaa tagcccacac gttcccctta aataagacat 16560 cacgatg 16567 // ID KC345798; SV 1; circular; genomic DNA; STD; HUM; 16571 BP. XX AC KC345798; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT6_170 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16571 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16571 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; 88cbf2ce6ae8f81ed1a1232605789f39. DR Ensembl-Gn; ENSG00000198840; homo_sapiens. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Tr; ENST00000361227; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16571 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT6_170" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="Buga" FT /db_xref="taxon:9606" FT /haplogroup="L0d1" FT D-loop complement(join(16026..16571,1..578)) FT tRNA 579..649 FT /product="tRNA-Phe" FT rRNA 650..1603 FT /product="12S ribosomal RNA" FT tRNA 1604..1672 FT /product="tRNA-Val" FT rRNA 1673..3231 FT /product="16S ribosomal RNA" FT tRNA 3232..3306 FT /product="tRNA-Leu" FT gene 3309..4264 FT /gene="ND1" FT CDS 3309..4264 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4263..4264,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q4GRH9" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:Q4GRH9" FT /protein_id="AGD82329.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPTTISSIPPQT" FT tRNA 4265..4333 FT /product="tRNA-Ile" FT tRNA complement(4331..4402) FT /product="tRNA-Gln" FT tRNA 4404..4471 FT /product="tRNA-Met" FT gene 4472..5513 FT /gene="ND2" FT CDS 4472..5513 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5513,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82330.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5514..5578 FT /product="tRNA-Trp" FT tRNA complement(5589..5657) FT /product="tRNA-Ala" FT tRNA complement(5659..5731) FT /product="tRNA-Asn" FT tRNA complement(5763..5828) FT /product="tRNA-Cys" FT tRNA complement(5828..5893) FT /product="tRNA-Tyr" FT gene 5906..7447 FT /gene="COX1" FT CDS 5906..7447 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B1J9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B1J9" FT /protein_id="AGD82331.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7447..7518) FT /product="tRNA-Ser" FT tRNA 7520..7587 FT /product="tRNA-Asp" FT gene 7588..8271 FT /gene="COX2" FT CDS 7588..8271 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /db_xref="GOA:Q9B1F9" FT /db_xref="InterPro:IPR001505" FT /db_xref="InterPro:IPR002429" FT /db_xref="InterPro:IPR008972" FT /db_xref="InterPro:IPR011759" FT /db_xref="InterPro:IPR014222" FT /db_xref="InterPro:IPR034210" FT /db_xref="InterPro:IPR036257" FT /db_xref="UniProtKB/TrEMBL:Q9B1F9" FT /protein_id="AGD82332.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIETPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8297..8366 FT /product="tRNA-Lys" FT gene 8368..8574 FT /gene="ATP8" FT CDS 8368..8574 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82333.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8529..9209 FT /gene="ATP6" FT CDS 8529..9209 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B185" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B185" FT /protein_id="AGD82334.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9209..9992 FT /gene="COX3" FT CDS 9209..9992 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9992,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82335.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9993..10060 FT /product="tRNA-Gly" FT gene 10061..10406 FT /gene="ND3" FT CDS 10061..10406 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10406,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXZ5" FT /db_xref="InterPro:IPR000440" FT /db_xref="InterPro:IPR038430" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ5" FT /protein_id="AGD82336.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWTE" FT tRNA 10407..10471 FT /product="tRNA-Arg" FT gene 10472..10768 FT /gene="ND4L" FT CDS 10472..10768 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:E2FR42" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:E2FR42" FT /protein_id="AGD82337.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVAISNTYGLDYVHNLNLLQC" FT gene 10762..12139 FT /gene="ND4" FT CDS 10762..12139 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12139,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82338.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12140..12208 FT /product="tRNA-His" FT tRNA 12209..12267 FT /product="tRNA-Ser" FT tRNA 12268..12338 FT /product="tRNA-Leu" FT gene 12339..14150 FT /gene="ND5" FT CDS 12339..14150 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q4F0F4" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q4F0F4" FT /protein_id="AGD82339.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPTSPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14151..14675) FT /gene="ND6" FT CDS complement(14151..14675) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82340.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14676..14744) FT /product="tRNA-Glu" FT gene 14749..15889 FT /gene="CYTB" FT CDS 14749..15889 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15889,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q15H14" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q15H14" FT /protein_id="AGD82341.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIITALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLLSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15890..15955 FT /product="tRNA-Thr" FT tRNA complement(15957..16025) FT /product="tRNA-Pro" XX SQ Sequence 16571 BP; 5133 A; 5187 C; 2163 G; 4087 T; 1 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcgaac atacctacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aacccccccn ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tattttcccc tcccactccc atactactaa 480 tctcatcaat acaaccccgc ccatcctacc cagcacacac acaccgctgc taaccccata 540 ccccgaacca accaaacccc aaagacaccc cccccacagt ttatgtagct tacctcctca 600 aagcaataca ctgaaaatgt ttagacgggc tcacatcacc ccataaacaa ataggtttgg 660 tcctagcctt tctattagct cttagtaaga ttacacatgc aagcatcccc gttccagtga 720 attcaccctc taaatcacca cgatcaaaag ggacaagcat caagcacgca acaatgcagc 780 tcaaaacgct tagcctagcc acacccccac gggaaacagc agtgataaac ctttagcaat 840 aaacgaaagt ttaactaagc tatactaacc ccagggttgg tcaatttcgt gccagccacc 900 gcggtcacac gattaaccca agtcaataga agccggcgta aagagtgttt tagatcaccc 960 cctccccaat aaagctaaaa ctcacctgag ttgtaaaaaa ctccagttga cacaaaataa 1020 actacgaaag tggctttaac atatctgaat acacaatagc taagacccaa actgggatta 1080 gataccccac tatgcttagc cctaaacctc aacagttaaa tcaacaaaac tgctcgccag 1140 aacactacga gccacagctt aaaactcaaa ggacctggcg gtgcttcata tccctctaga 1200 ggagcctgtt ctgtaatcga taaaccccga tcaacctcac cacctcttgc tcagcctata 1260 taccgccatc ttcagcaaac cctgatgaag gctacaaagt aagcgcaagt acccacgtaa 1320 agacgttagg tcaaggtgta gcccatgagg tggcaagaaa tgggctacat tttctacccc 1380 agaaaactac gatagccctt atgaaactta agggtcgaag gtggatttag cagtaaacta 1440 agagtagagt gcttagttga acagggccct gaagcgcgta cacaccgccc gtcaccctcc 1500 tcaagtatac ttcaaaggac atttaactaa aacccctacg catttatata gaggagacaa 1560 gtcgtaacat ggtaagtgta ctggaaagtg cacttggacg aaccagagtg tagcttaaca 1620 caaagcaccc aacttacact taggagattt caacttaact tgaccgctct gagctaaacc 1680 tagccccaaa cccactccac cttactacca gacaacctta gccaaaccat ttacccaaat 1740 aaagtatagg cgatagaaat tgaaacctgg cgcaatagat atagtaccgc aagggaaaga 1800 tgaaaaatta taaccaagca taatatagca aggactaacc cctatacctt ctgcataatg 1860 aattaactag aaataacttt gcaaggagag ccaaagctaa gacccccgaa accagacgag 1920 ctacctaaga acagctaaaa gagcacaccc gtctatgtag caaaatagtg ggaagattta 1980 taggtagagg cgacaaacct accgagcctg gtgatagctg gttgtccaag atagaatctt 2040 agttcaactt taaatttgcc cacagaaccc tctaaatccc cttgtaaatt taactgttag 2100 tccaaagagg aacagctctt tggacactag gaaaaaacct tgtagagaga gtaaaaaatt 2160 taacacccat agtaggccta aaagcagcca ccaattaaga aagcgttcaa gctcaacacc 2220 cactacctaa aaaatcccaa acatataact gaactcctca cacccaattg gaccaatcta 2280 tcaccctata gaagaactaa tgttagtata agtaacatga aaacattctc ctccgcataa 2340 gcctgcgtca gattaaaaca ctgaactgac aattaacagc ccaatatcta caatcaacca 2400 acaagtcatt attaccctca ctgtcaaccc aacacaggca tgctcataag gaaaggttaa 2460 aaaaagtaaa aggaactcgg caaatcctta ccccgcctgt ttaccaaaaa catcacctct 2520 agcatcacca gtattagagg caccgcctgc ccagtgacac atgtttaacg gccgcggtac 2580 cctaaccgtg caaaggtagc ataatcactt gttccttaaa tagggacctg tatgaatggc 2640 tccacgaggg ttcagctgtc tcttactttt aaccagtgaa attgacctgc ccgtgaagag 2700 gcgggcataa cacagcaaga cgagaagacc ctatggagct ttaatttatt aatgcaaaca 2760 atacctaaca aacccacagg tcctaaacta ccaaacctgc attaaaaatt tcggttgggg 2820 cgacctcgga gcagaaccca acctccgagc agtacatgct aagacttcac cagtcaaagc 2880 gaactaccat actcaattga tccaataact tgaccaacgg aacaagttac cctagggata 2940 acagcgcaat cctattctag agtccatatc aacaataggg tttacgacct cgatgttgga 3000 tcaggacatc ccgatggtgc agccgctatt aaaggttcgt ttgttcaacg attaaagtcc 3060 tacgtgatct gagttcagac cggagtaatc caggtcggtt tctatctact tcaaattcct 3120 ccctgtacga aaggacaaga gaaataaggc ctacttcaca aagcgccttc ccccgtaaat 3180 gatatcatct caacttagta ttatacccac acccacccaa gaacagggtt tgttaagatg 3240 gcagagcccg gtaatcgcat aaaacttaaa actttacagt cagaggttca attcctcttc 3300 ttaacaacat acccatggcc aacctcctac tcctcattgt acccattcta atcgcaatgg 3360 cattcctaat gcttaccgaa cgaaaaattc taggctatat acaactacgc aaaggcccca 3420 acgttgtagg cccctacgga ctactacaac ccttcgctga cgccataaaa ctcttcacca 3480 aagagcccct aaaacccgcc acatctacca tcaccctata catcaccgcc ccaaccttag 3540 ctctcaccat cgctcttcta ctatgaaccc ccctccccat acccaacccc ctggttaacc 3600 tcaacctagg cctcctattc attctagcca cctctagcct agccgtttac tcaatcctct 3660 gatcagggtg agcatcaaac tcaaactacg ccctgatcgg cgcactgcga gcagtagccc 3720 aaacaatctc atatgaagtc accctagcca tcattctgct atcaacatta ctaataagtg 3780 gctcctttaa cctctccacc cttatcacaa cacaagaaca cctctgatta ctcctgccat 3840 catgaccctt ggccataata tgatttatct ccacactagc agagaccaac cgaaccccct 3900 tcgaccttgc cgaaggggag tccgaactag tctcaggctt caacatcgaa tacgccgcag 3960 gccccttcgc cctattcttc atagccgaat acacaaacat tattataata aacaccctca 4020 ccactacaat cttcctagga acaacatatg acgcactctc ccctgaactc tacacaacat 4080 attttgtcac caagacccta cttctgacct ccctgttctt atgaattcga acagcatacc 4140 cccgattccg ctacgaccaa ctcatacacc tcctatgaaa aaacttccta ccactcaccc 4200 tagcattact tatatgatat gtctccatac ccactacaat ctccagcatt ccccctcaaa 4260 cctaagaaat atgtctgata aaagagttac tttgatagag taaataatag gagtttaaac 4320 ccccttattt ctaggactat gagaatcgaa cccatccctg agaatccaaa attctccgtg 4380 ccacctatca caccccatcc taaagtaagg tcagctaaat aagctatcgg gcccataccc 4440 cgaaaatgtt ggttataccc ttcccgtact aattaatccc ctggcccaac ccgtcatcta 4500 ctctaccatc tttgcaggca cactcatcac agcgctaagc tcgcactgat tttttacctg 4560 agtcggccta gaaataaaca tgctagcttt tattccagtt ctaaccaaaa aaataaaccc 4620 tcgttccaca gaagctgcca tcaagtattt cctcacgcaa gcaaccgcat ccataatcct 4680 tctaatagct atcctcttca acaatatact ctccggacaa tgaaccataa ccaatactac 4740 caatcaatac tcatcattaa taatcataat ggctatagca ataaaactag gaatagcccc 4800 ctttcacttc tgagtcccag aggttaccca aggcacccct ctgacatccg gcctgcttct 4860 tctcacatga caaaaactag cccccatctc aatcatatac caaatctctc cctcactaaa 4920 cgtaagcctt ctcctcactc tctcaatctt atccatcata gcaggcagtt gaggtggatt 4980 aaaccaaacc cagctacgca aaatcttagc atactcctca attacccaca taggatgaat 5040 aatagcagtt ctaccgtaca accctaacat aaccattctt aatttaacta tttatattat 5100 cctaactact accgcattcc tactactcaa cttaaactcc agcaccacga ccctactact 5160 atctcgcacc tgaaacaagc taacatgact aacaccctta attccatcca ccctcctctc 5220 cctaggaggc ctgcccccgc taaccggctt tttgcccaaa tgggccatta tcgaagaatt 5280 cacaaaaaac aatagcctca tcatccccac catcatagcc accatcaccc tccttaacct 5340 ctacttctac ctacgcctaa tctactccac ctcaatcaca ctactcccca tatctaacaa 5400 cgtaaaaata aaatgacagt ttgaacatac aaaacccacc ccactcctcc ccacactcat 5460 cgcccttacc acgctactcc tacctatctc cccttttata ctaataatct tatagaaatt 5520 taggttaaat acagaccaag agccttcaaa gccctcagta agttgcaata cttaatttct 5580 gtaacagcta aggactgcaa aaccccactc tgcatcaact gaacgcaaat cagccacttt 5640 aattaagcta agcccttact agaccaatgg gacttaaacc cacaaacact tagttaacag 5700 ctaagcaccc taatcaactg gcttcaatct acttctcccg ccgccgggaa aaaaggcggg 5760 agaagccccg gcaggtttga agctgcttct tcgaatttgc aattcaatat gaaaatcacc 5820 tcggagctgg taaaaagagg cctaacccct gtctttagat ttacagtcca atgcttcact 5880 cagccatttt acctcacccc cactgatgtt cgccgaccgt tgactattct ctacaaacca 5940 caaagacatt ggaacactat acctattatt cggcgcatga gctggagtcc taggcacagc 6000 tctaagcctc cttattcgag ccgagctggg ccagccaggc aaccttctag gtaacgacca 6060 catctacaac gttatcgtca cagcccatgc atttgtaata atcttcttca tagtaatacc 6120 catcataatc ggaggctttg gcaactgact agttccccta ataatcggtg cccccgatat 6180 ggcgttcccc cgcataaaca acataagctt ctgactctta cctccctctc tcctactcct 6240 gctcgcatct gctatagtgg aggccggggc aggaacaggt tgaacagtct accctccctt 6300 agcagggaac tactcccacc ctggagcctc cgtagaccta accatcttct ccttacacct 6360 agcaggtgtc tcctctatct taggggccat caatttcatc acaacaatta tcaatataaa 6420 accccctgcc ataacccaat accaaacgcc cctcttcgtc tgatccgtcc taatcacagc 6480 agtcctactt ctcctatctc tcccagtcct agctgctggc atcactatac tactaacaga 6540 ccgcaacctc aacaccacct tcttcgaccc cgccggagga ggagacccca ttctatacca 6600 acacctattc tgatttttcg gtcaccctga agtttatatt cttatcctac caggcttcgg 6660 aataatctcc catattgtaa cttactactc cggaaaaaaa gaaccatttg gatacatagg 6720 tatggtctga gctatgatat caattggctt cctagggttt atcgtgtgag cacaccatat 6780 atttacagta ggaatagacg tagacacacg agcatacttc acctccgcta ccataatcat 6840 cgctatcccc accggcgtca aagtatttag ctgactcgcc acactccacg gaagcaatat 6900 gaaatgatct gctgcagtgc tctgagccct aggattcatc tttcttttca ccgtaggtgg 6960 cctgactggc attgtattag caaactcatc actagacatc gtactacacg acacgtacta 7020 cgttgtagct cacttccact atgtcctatc aataggagct gtatttgcca tcataggagg 7080 cttcattcac tgatttcccc tattctcagg ctacacccta gaccaaacct acgccaaaat 7140 ccatttcgct atcatattca tcggcgtaaa tctaactttc ttcccacaac actttctcgg 7200 cctatccgga atgccccgac gttactcgga ctaccccgat gcatacacca catgaaatat 7260 cctatcatct gtaggctcat tcatttctct aacagcagta atattaataa ttttcatgat 7320 ttgagaagcc ttcgcttcga agcgaaaagt cctaatagta gaagaaccct ccataaacct 7380 ggagtgacta tatggatgcc ccccacccta ccacacattc gaagaacccg tatacataaa 7440 atctagacaa aaaaggaagg aatcgaaccc cccaaagctg gtttcaagcc aaccccatgg 7500 cctccatgac tttttcaaaa agatattaga aaaaccattt cataactttg tcaaagttaa 7560 attataggct aaatcctata tatcttaatg gcacatgcag cgcaagtagg tctacaagac 7620 gctacttccc ctatcataga agagcttatc acctttcatg atcacgccct cataatcatt 7680 ttccttatct gcttcctagt cctgtatgcc cttttcctaa cactcacaac aaaactaact 7740 aatactaaca tctcagacgc tcaggaaata gaaaccgtct gaactatcct gcccgccatc 7800 atcctagtcc tcatcgccct cccatcccta cgcatccttt acataacaga cgaggtcaac 7860 gatccctccc ttaccatcaa atcaattggc caccaatggt actgaaccta cgagtacacc 7920 gactacggcg gactaatctt caactcctac atacttcccc cattattcct agaaccaggc 7980 gacctgcgac tccttgacgt tgacaatcga gtagtactcc cgattgaaac ccccattcgt 8040 ataataatta catcacaaga cgtcttgcac tcatgagctg tccccacatt aggcttaaaa 8100 acagatgcaa ttccaggacg tctaaaccaa accactttca ccgctacacg accaggggta 8160 tactacggtc aatgctctga aatctgtgga gcaaaccaca gtttcatgcc catcgtccta 8220 gaattaattc ccctaaaaat ctttgaaata ggacccgtat ttaccctata gcaccccctc 8280 taccccctct agagcccact gtaaagctaa cttagcatta accttttaag ttaaagatta 8340 agagaaccaa cacctcttta cagtgaaatg ccccaactaa atactaccgt atggcccacc 8400 ataattaccc ccatactcct tacactattc ctcatcaccc aactaaaaat attaaacaca 8460 aactaccact tacctccctc accaaagccc ataaaaataa aaaattataa caaaccctga 8520 gaaccaaaat gaacgaaaat ctgttcgctt cattcattgc ccccacaatc ctaggcctac 8580 ccgccgcagt actgatcatt ctatttcccc ctctattgat ccccacctcc aaatatctca 8640 tcaacaaccg actaattacc acccaacaat gactaatcaa actaacctca aaacaaatga 8700 tagccataca caacactaaa ggacgaacct gatctcttat actagtatcc ttaatcattt 8760 ttattgccac aactaacctc ctcggactcc tgcctcactc atttacacca accacccaac 8820 tatctataaa cctagccatg gccatcccct tatgagcggg cgcagtgatt ataggctttc 8880 gctctaagat taaaaatgcc ctagcccact tcttaccaca aggcacacct acacccctta 8940 tccccatact agttattatc gaaaccatca gcctactcat tcaaccaata gccctggccg 9000 tacgcctaac cgctaacatt actgcaggcc acctactcat gcatctaatt ggaagcgcca 9060 ccctagcaat atcaaccatt aaccttccct ctacacttat catcttcaca attctaattc 9120 tactgactat cctagaaatc gctgtcgcct taatccaagc ctacgttttc acacttctag 9180 taagcctcta cctgcacgac aacacataat gacccaccaa tcacatgcct atcatatagt 9240 aaaacccagc ccatgacccc taacaggggc cctctcagcc ctcctaatga cctccggcct 9300 agccatgtga tttcacttcc actccataac gctcctcata ctaggcctgc taaccaacac 9360 actaaccata taccaatgat ggcgcgatgt aacacgagaa agcacatacc aaggccacca 9420 cacaccacct gtccaaaaag gccttcgata cgggataatc ctatttatta cctcagaagt 9480 ttttttcttc gcaggatttt tctgagcctt ttaccactcc agcctagccc ctacccccca 9540 actaggaggg cactggcccc caacaggcat caccccgcta aatcccctag aagtcccact 9600 cctaaacaca tccgtattac tcgcatcagg agtatcaatc acctgagctc accatagtct 9660 aatagaaaac aaccgaaacc aaataattca agcactgctt attacaattt tactgggtct 9720 ctattttacc ctcctacaag cctcagagta cttcgaatct cccttcacca tttccgacgg 9780 catctacggc tcaacatttt ttgtagccac aggcttccac ggacttcacg tcattattgg 9840 ctcaactttc ctcactatct gcttcatccg ccaactaata tttcacttta catccaaaca 9900 tcactttggc ttcgaagccg ccgcctgata ctggcatttt gtagatgtgg tttgactatt 9960 tctgtatgtc tccatctatt gatgagggtc ttactctttt agtataaata gtaccgttaa 10020 cttccaatta actagttttg acaacattca aaaaagagta ataaacttcg ccttaatttt 10080 aataatcaac accctcctag ccttactact aataattatt acattttgac taccacaact 10140 caacggctac atagaaaaat ccacccctta cgagtgcggc ttcgacccta tatcccccgc 10200 ccgcgtccct ttctccataa aattcttctt agtagctatt accttcttat tatttgatct 10260 agaaattgcc ctccttttac ccctaccatg agccctacaa acaactaacc tgccactaat 10320 agttatgtca tccctcttat taatcatcat cctagcccta agtctggcct atgagtgact 10380 acaaaaagga ttagactgaa ccgaattggt atatagttta aacaaaacga atgatttcga 10440 ctcattaaat tatgataatc atatttacca aatgcccctc atttacataa atattatact 10500 agcatttacc atctcacttc taggaatact agtatatcgc tcacacctca tatcctccct 10560 actatgccta gaaggaataa tactatcgct attcattata gctactctca taaccctcaa 10620 cacccactcc ctcttagcca atattgtgcc tattgccata ctagtttttg ccgcctgcga 10680 agcagcggta ggcctagccc tactagtcgc aatctccaac acatatggcc tagactacgt 10740 acataaccta aacctactcc aatgctaaaa ctaatcgtcc caacaattat attactacca 10800 ctgacatgac tctccaaaaa acacataatt tgaatcaaca caaccaccca cagcctaatt 10860 attagcatca tccccctact attttttaac caaatcaaca acaacctatt tagctgctcc 10920 ccaacctttt cctccgaccc cctaacaacc cccctcctaa tactaactac ctgactccta 10980 cccctcacaa tcatggcaag ccaacgccac ttatccagtg aaccactatc acgaaaaaaa 11040 ctctacctct ctatactaat ctccctacaa atctccttaa ttataacatt cacagccaca 11100 gaactaatca tattttatat cttcttcgaa accacactta tccccacctt ggctatcatc 11160 acccgatgag gcaaccagcc agaacgcctg aacgcaggca catacttcct attctacacc 11220 ctagtaggct cccttcccct actcatcgca ctaatttaca ctcacaacac cctaggctca 11280 ctaaacattc tactactcac tctcactgcc caagaactat caaactcctg agccaacaac 11340 ttaatatgac tagcttacac aatagctttt atagtaaaga tacctcttta cggactccac 11400 ttatgactcc ctaaagccca tgtcgaagcc cccatcgctg ggtcaatagt acttgccgca 11460 gtactcttaa aactaggcgg ctatggtata atacgcctca cactcattct caaccccctg 11520 acaaaacaca tagcctaccc cttccttgta ctatccctat gaggcataat tataacaagc 11580 tccatctgcc tacgacaaac agacctaaaa tcgctcattg catactcttc aatcagccac 11640 atagccctcg tagtaacagc cattctcatc caaaccccct gaagcttcac cggcgcagtc 11700 attctcataa tcgcccacgg acttacatcc tcattactat tctgcctagc aaactcaaac 11760 tacgaacgca ctcacagtcg catcataatc ctctctcaag gacttcaaac tctactccca 11820 ctaatagctt tttgatgact tctagcaagc ctcgctaacc tcgccttacc ccccactatt 11880 aacctactgg gagaactctc tgtgctagta accacattct cctgatcaaa tatcactctc 11940 ctacttacag gactcaacat actagtcaca gccctatact ccctctacat atttaccaca 12000 acacaatgag gctcactcac ccaccacatt aacaacataa aaccctcatt cacacgagaa 12060 aacaccctca tgttcataca cctatccccc attctcctcc tatccctcaa ccccgacatc 12120 atcaccgggt tttcctcttg taaatatagt ttaaccaaaa catcagattg tgaatctgac 12180 aacagaggct tacgacccct tatttaccga gaaagctcac aagaactgct aactcatgcc 12240 cccatgtcta acaacatggc tttctcaact tttaaaggat aacagctatc cattggtctt 12300 aggccccaaa aattttggtg caactccaaa taaaagtaat aaccatgcac actactataa 12360 ccaccctaac cctgacttcc ctaattcccc ccatccttac caccctcgtt aaccctaaca 12420 aaaaaaactc atacccccat tatgtaaaat ccattgtcgc atccaccttt attatcagtc 12480 tcttccccac aacaatattc atgtgcctag accaagaagt tattatctcg aactgacact 12540 gagccacaac ccaaacaacc cagctctccc taagcttcaa actagactac ttctccataa 12600 tattcatccc tgtagcattg ttcgttacat ggtccatcat agaattctca ctgtgatata 12660 taaactcaga cccaaacatt aatcagttct tcaaatatct actcattttc ctaattacca 12720 tgctaatctt agttaccgct aacaacctat tccaactgtt catcggctga gagggcgtag 12780 gaattatatc cttcttgctc atcagttgat gatacgcccg agcagatgcc aacacagcag 12840 ccattcaagc aatcctatac aaccgtatcg gcgatatcgg tttcatcctc gccttagcat 12900 gatttatcct acactccaac tcatgagacc cacaacaaat agcccttcta aacgctaatc 12960 caagcctcac cccactacta ggcctcctcc tagcagcagc aggcaaatca gcccaattag 13020 gtctccaccc ctgactcccc tcagccatag aaggccccac cccagtctca gccctactcc 13080 actcaagcac tatagttgta gcaggagtct tcttactcat ccgcttccac cccctagcag 13140 aaaatagccc actaatccaa actctaacac tatgcttagg cgctatcacc actctgttcg 13200 cagcagtctg cgcccttaca caaaatgaca tcaaaaaaat cgtagccttc tccacttcaa 13260 gtcaactagg actcatagta gttacaatcg gcatcaacca accacaccta gcattcctgc 13320 acatctgtac ccacgccttc ttcaaagcca tactatttat gtgctccggg tccatcatcc 13380 acaaccttaa caatgaacaa gatattcgaa aaataggagg actactcaaa accatacctc 13440 tcacttcaac ctccctcacc attggcagcc tagcattagc aggaatacct ttcctcacag 13500 gtttctattc caaagaccac atcatcgaaa ccgcaaacat atcatacaca aacgcctgag 13560 ccctatctat tactctcatc gctacctccc tgacaagcgc ctatagcact cgaataattc 13620 ttctcaccct aacaggtcaa cctcgcttcc ctacccttac taacattaac gaaaataacc 13680 ccaccctact aaaccccatt aaacgcctgg cagccggaag cctattcgca ggatttctca 13740 ttactaacaa catttccccc acatccccct tccaaacaac aatccccctc tacctaaaac 13800 tcacagccct cgctgtcact ttcctaggac ttctaacagc cctagacctc aactacctaa 13860 ccaacaaact taaaataaaa tccccactat gcacatttta tttctccaac atactcggat 13920 tctaccctag catcacacac cgcacaatcc cctatctagg ccttcttacg agccaaaacc 13980 tgcccctact cctcctagac ctaacctgac tagaaaagct attacctaaa acaatttcac 14040 agcaccaaat ctccacctcc atcatcacct caacccaaaa aggcataatt aaactttact 14100 tcctctcttt cttcttccca ctcatcctaa ccctactcct aatcacataa cctattcccc 14160 cgagcaatct caattacaat atatacacca acaaacaatg ttcaaccagt aactactact 14220 aatcaacgcc cataatcata caaagccccc gcaccaatag gatcctcccg aatcaaccct 14280 gacccctctc cttcataaat tattcagctt cctacactat taaagtttac cacaaccacc 14340 accccatcat actctttcac ccacagcacc aatcctacct ccatcgctaa ccccactaaa 14400 acactcacca agacctcaac ccctgacccc catgcctcag gatactcctc aatagccatc 14460 gctgtagtat atccaaagac aaccatcatt ccccctaaat aaattaaaaa aactattaaa 14520 cccatataac ctcccccaaa attcagaata ataacacacc cgaccacacc gctaacaatc 14580 aatactaaac ccccataaat aggagaaggc ttagaagaaa accccacaaa ccccattact 14640 aaacccacac tcaacagaaa caaagcatac atcattattc tcgcacggac tacaaccacg 14700 accaatgata tgaaaaacca tcgttgtatt tcaactacaa gaacaccaat gaccccaata 14760 cgcaaaatta accccctaat aaaattaatt aaccactcat tcatcgacct ccccacccca 14820 tccaacatct ccgcatgatg aaacttcggc tcactccttg gcgcctgcct gatcctccaa 14880 atcaccacag gactattcct agccatgcac tactcaccag acgcctcaac cgccttttca 14940 tcaatcgccc acatcactcg agacgtaaat tatggctgaa tcatccgcta ccttcacgcc 15000 aatggcgcct caatattctt tatctgcctc ttcctacaca tcgggcgagg cctatattac 15060 ggatcatttc tctactcaga aacctgaaac atcggcatta tcctcctgct tgcaactata 15120 gcaacagcct tcataggcta tgtcctcccg tgaggccaaa tatcattctg aggggccaca 15180 gtaattacaa acttactatc cgccatccca tacattggaa cagacctagt tcaatgaatc 15240 tgaggaggct actcagtaga cagtcccacc ctcacacgat tctttacctt tcacttcatc 15300 ttgcccttca ttattacagc cctagcagca ctccacctcc tattcttgca cgaaacggga 15360 tcaaacaacc ccctaggaat cacctcccat tccgataaaa tcaccttcca cccttactac 15420 acaatcaaag acgccctcgg cttacttctc ttccttctct ccttaataac attaacacta 15480 ctctcaccag acctcctagg cgacccagac aattataccc tagccaaccc cttaaacacc 15540 cctccccaca tcaagcccga atgatatttc ctattcgcct acacaattct ccgatccgtc 15600 cctaacaaac taggaggcgt ccttgcccta ttactatcca tcctcatcct agcaataatc 15660 cccatcctcc atatatccaa acaacaaagc ataatatttc gcccactaag ccaatcactt 15720 tattgactcc tagccgcaga cctcctcatt ctaacctgaa tcggaggaca accagtaagc 15780 taccctttta ccatcattgg acaagtagca tccgtactat acttcacaac aatcctaatc 15840 ctaataccaa ctatctccct aattgaaaac aaaatactca aatgggcctg tccttgtagt 15900 ataaactaat acaccagtct tgtaaaccgg aaatgaaaac ctctttccaa ggacaaatca 15960 gagaaaaagt ctttaactcc accattagca cccaaagcta agattctaat ttaaactatt 16020 ctctgttctt tcatggggaa gcagatttgg gtaccaccca agtattgact cacccatcaa 16080 caaccgctat gtatttcgta cattactgcc agccaccatg aatattgtac agtaccataa 16140 atacttgacc acctgtagta cataaaaacc caatccacat taaaaccctc cccccatgct 16200 tacaagcaag tacagcaatc aaccttcaac tgtcacacat caaccgcaac tccaaagcca 16260 cccctcaccc actaggatac caacaaacct acccaccctt aacagtacat agcacataaa 16320 gccatttacc gtacatagca cattacagtc aaatcccttc tcgtccccat ggatgacccc 16380 cctcagatag gggtcccttg gccaccatcc tccgtgaaat caatatcccg cacaagagtg 16440 ctactctcct cgctccgggc ccataacact tgggggtagc taaagtgaac tgtatccgac 16500 atctggttcc tacttcaggg ccataaagcc taaatagccc acacgttccc cttaaataag 16560 acatcacgat g 16571 // ID KC345799; SV 1; circular; genomic DNA; STD; HUM; 16571 BP. XX AC KC345799; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT6_171 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16571 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16571 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; e5fa58b77db2fa229ea55455505f58a2. DR Ensembl-Gn; ENSG00000198840; homo_sapiens. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Tr; ENST00000361227; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16571 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT6_171" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="Buga" FT /db_xref="taxon:9606" FT /haplogroup="L0d1" FT D-loop complement(join(16026..16571,1..578)) FT tRNA 579..649 FT /product="tRNA-Phe" FT rRNA 650..1603 FT /product="12S ribosomal RNA" FT tRNA 1604..1672 FT /product="tRNA-Val" FT rRNA 1673..3231 FT /product="16S ribosomal RNA" FT tRNA 3232..3306 FT /product="tRNA-Leu" FT gene 3309..4264 FT /gene="ND1" FT CDS 3309..4264 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4263..4264,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q4GRH9" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:Q4GRH9" FT /protein_id="AGD82342.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPTTISSIPPQT" FT tRNA 4265..4333 FT /product="tRNA-Ile" FT tRNA complement(4331..4402) FT /product="tRNA-Gln" FT tRNA 4404..4471 FT /product="tRNA-Met" FT gene 4472..5513 FT /gene="ND2" FT CDS 4472..5513 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5513,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82343.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5514..5578 FT /product="tRNA-Trp" FT tRNA complement(5589..5657) FT /product="tRNA-Ala" FT tRNA complement(5659..5731) FT /product="tRNA-Asn" FT tRNA complement(5763..5828) FT /product="tRNA-Cys" FT tRNA complement(5828..5893) FT /product="tRNA-Tyr" FT gene 5906..7447 FT /gene="COX1" FT CDS 5906..7447 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B1J9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B1J9" FT /protein_id="AGD82344.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7447..7518) FT /product="tRNA-Ser" FT tRNA 7520..7587 FT /product="tRNA-Asp" FT gene 7588..8271 FT /gene="COX2" FT CDS 7588..8271 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /db_xref="GOA:Q9B1F9" FT /db_xref="InterPro:IPR001505" FT /db_xref="InterPro:IPR002429" FT /db_xref="InterPro:IPR008972" FT /db_xref="InterPro:IPR011759" FT /db_xref="InterPro:IPR014222" FT /db_xref="InterPro:IPR034210" FT /db_xref="InterPro:IPR036257" FT /db_xref="UniProtKB/TrEMBL:Q9B1F9" FT /protein_id="AGD82345.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIETPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8297..8366 FT /product="tRNA-Lys" FT gene 8368..8574 FT /gene="ATP8" FT CDS 8368..8574 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82346.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8529..9209 FT /gene="ATP6" FT CDS 8529..9209 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B185" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B185" FT /protein_id="AGD82347.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9209..9992 FT /gene="COX3" FT CDS 9209..9992 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9992,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82348.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9993..10060 FT /product="tRNA-Gly" FT gene 10061..10406 FT /gene="ND3" FT CDS 10061..10406 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10406,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXZ5" FT /db_xref="InterPro:IPR000440" FT /db_xref="InterPro:IPR038430" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ5" FT /protein_id="AGD82349.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWTE" FT tRNA 10407..10471 FT /product="tRNA-Arg" FT gene 10472..10768 FT /gene="ND4L" FT CDS 10472..10768 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:E2FR42" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:E2FR42" FT /protein_id="AGD82350.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVAISNTYGLDYVHNLNLLQC" FT gene 10762..12139 FT /gene="ND4" FT CDS 10762..12139 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12139,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82351.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12140..12208 FT /product="tRNA-His" FT tRNA 12209..12267 FT /product="tRNA-Ser" FT tRNA 12268..12338 FT /product="tRNA-Leu" FT gene 12339..14150 FT /gene="ND5" FT CDS 12339..14150 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q4F0F4" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q4F0F4" FT /protein_id="AGD82352.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPTSPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14151..14675) FT /gene="ND6" FT CDS complement(14151..14675) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82353.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14676..14744) FT /product="tRNA-Glu" FT gene 14749..15889 FT /gene="CYTB" FT CDS 14749..15889 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15889,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q15H14" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q15H14" FT /protein_id="AGD82354.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIITALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLLSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15890..15955 FT /product="tRNA-Thr" FT tRNA complement(15957..16025) FT /product="tRNA-Pro" XX SQ Sequence 16571 BP; 5132 A; 5187 C; 2164 G; 4087 T; 1 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcggac atacctacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aacccccccn ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tattttcccc tcccactccc atactactaa 480 tctcatcaat acaaccccgc ccatcctacc cagcacacac acaccgctgc taaccccata 540 ccccgaacca accaaacccc aaagacaccc cccccacagt ttatgtagct tacctcctca 600 aagcaataca ctgaaaatgt ttagacgggc tcacatcacc ccataaacaa ataggtttgg 660 tcctagcctt tctattagct cttagtaaga ttacacatgc aagcatcccc gttccagtga 720 attcaccctc taaatcacca cgatcaaaag ggacaagcat caagcacgca acaatgcagc 780 tcaaaacgct tagcctagcc acacccccac gggaaacagc agtgataaac ctttagcaat 840 aaacgaaagt ttaactaagc tatactaacc ccagggttgg tcaatttcgt gccagccacc 900 gcggtcacac gattaaccca agtcaataga agccggcgta aagagtgttt tagatcaccc 960 cctccccaat aaagctaaaa ctcacctgag ttgtaaaaaa ctccagttga cacaaaataa 1020 actacgaaag tggctttaac atatctgaat acacaatagc taagacccaa actgggatta 1080 gataccccac tatgcttagc cctaaacctc aacagttaaa tcaacaaaac tgctcgccag 1140 aacactacga gccacagctt aaaactcaaa ggacctggcg gtgcttcata tccctctaga 1200 ggagcctgtt ctgtaatcga taaaccccga tcaacctcac cacctcttgc tcagcctata 1260 taccgccatc ttcagcaaac cctgatgaag gctacaaagt aagcgcaagt acccacgtaa 1320 agacgttagg tcaaggtgta gcccatgagg tggcaagaaa tgggctacat tttctacccc 1380 agaaaactac gatagccctt atgaaactta agggtcgaag gtggatttag cagtaaacta 1440 agagtagagt gcttagttga acagggccct gaagcgcgta cacaccgccc gtcaccctcc 1500 tcaagtatac ttcaaaggac atttaactaa aacccctacg catttatata gaggagacaa 1560 gtcgtaacat ggtaagtgta ctggaaagtg cacttggacg aaccagagtg tagcttaaca 1620 caaagcaccc aacttacact taggagattt caacttaact tgaccgctct gagctaaacc 1680 tagccccaaa cccactccac cttactacca gacaacctta gccaaaccat ttacccaaat 1740 aaagtatagg cgatagaaat tgaaacctgg cgcaatagat atagtaccgc aagggaaaga 1800 tgaaaaatta taaccaagca taatatagca aggactaacc cctatacctt ctgcataatg 1860 aattaactag aaataacttt gcaaggagag ccaaagctaa gacccccgaa accagacgag 1920 ctacctaaga acagctaaaa gagcacaccc gtctatgtag caaaatagtg ggaagattta 1980 taggtagagg cgacaaacct accgagcctg gtgatagctg gttgtccaag atagaatctt 2040 agttcaactt taaatttgcc cacagaaccc tctaaatccc cttgtaaatt taactgttag 2100 tccaaagagg aacagctctt tggacactag gaaaaaacct tgtagagaga gtaaaaaatt 2160 taacacccat agtaggccta aaagcagcca ccaattaaga aagcgttcaa gctcaacacc 2220 cactacctaa aaaatcccaa acatataact gaactcctca cacccaattg gaccaatcta 2280 tcaccctata gaagaactaa tgttagtata agtaacatga aaacattctc ctccgcataa 2340 gcctgcgtca gattaaaaca ctgaactgac aattaacagc ccaatatcta caatcaacca 2400 acaagtcatt attaccctca ctgtcaaccc aacacaggca tgctcataag gaaaggttaa 2460 aaaaagtaaa aggaactcgg caaatcctta ccccgcctgt ttaccaaaaa catcacctct 2520 agcatcacca gtattagagg caccgcctgc ccagtgacac atgtttaacg gccgcggtac 2580 cctaaccgtg caaaggtagc ataatcactt gttccttaaa tagggacctg tatgaatggc 2640 tccacgaggg ttcagctgtc tcttactttt aaccagtgaa attgacctgc ccgtgaagag 2700 gcgggcataa cacagcaaga cgagaagacc ctatggagct ttaatttatt aatgcaaaca 2760 atacctaaca aacccacagg tcctaaacta ccaaacctgc attaaaaatt tcggttgggg 2820 cgacctcgga gcagaaccca acctccgagc agtacatgct aagacttcac cagtcaaagc 2880 gaactaccat actcaattga tccaataact tgaccaacgg aacaagttac cctagggata 2940 acagcgcaat cctattctag agtccatatc aacaataggg tttacgacct cgatgttgga 3000 tcaggacatc ccgatggtgc agccgctatt aaaggttcgt ttgttcaacg attaaagtcc 3060 tacgtgatct gagttcagac cggagtaatc caggtcggtt tctatctact tcaaattcct 3120 ccctgtacga aaggacaaga gaaataaggc ctacttcaca aagcgccttc ccccgtaaat 3180 gatatcatct caacttagta ttatacccac acccacccaa gaacagggtt tgttaagatg 3240 gcagagcccg gtaatcgcat aaaacttaaa actttacagt cagaggttca attcctcttc 3300 ttaacaacat acccatggcc aacctcctac tcctcattgt acccattcta atcgcaatgg 3360 cattcctaat gcttaccgaa cgaaaaattc taggctatat acaactacgc aaaggcccca 3420 acgttgtagg cccctacgga ctactacaac ccttcgctga cgccataaaa ctcttcacca 3480 aagagcccct aaaacccgcc acatctacca tcaccctata catcaccgcc ccaaccttag 3540 ctctcaccat cgctcttcta ctatgaaccc ccctccccat acccaacccc ctggttaacc 3600 tcaacctagg cctcctattc attctagcca cctctagcct agccgtttac tcaatcctct 3660 gatcagggtg agcatcaaac tcaaactacg ccctgatcgg cgcactgcga gcagtagccc 3720 aaacaatctc atatgaagtc accctagcca tcattctgct atcaacatta ctaataagtg 3780 gctcctttaa cctctccacc cttatcacaa cacaagaaca cctctgatta ctcctgccat 3840 catgaccctt ggccataata tgatttatct ccacactagc agagaccaac cgaaccccct 3900 tcgaccttgc cgaaggggag tccgaactag tctcaggctt caacatcgaa tacgccgcag 3960 gccccttcgc cctattcttc atagccgaat acacaaacat tattataata aacaccctca 4020 ccactacaat cttcctagga acaacatatg acgcactctc ccctgaactc tacacaacat 4080 attttgtcac caagacccta cttctgacct ccctgttctt atgaattcga acagcatacc 4140 cccgattccg ctacgaccaa ctcatacacc tcctatgaaa aaacttccta ccactcaccc 4200 tagcattact tatatgatat gtctccatac ccactacaat ctccagcatt ccccctcaaa 4260 cctaagaaat atgtctgata aaagagttac tttgatagag taaataatag gagtttaaac 4320 ccccttattt ctaggactat gagaatcgaa cccatccctg agaatccaaa attctccgtg 4380 ccacctatca caccccatcc taaagtaagg tcagctaaat aagctatcgg gcccataccc 4440 cgaaaatgtt ggttataccc ttcccgtact aattaatccc ctggcccaac ccgtcatcta 4500 ctctaccatc tttgcaggca cactcatcac agcgctaagc tcgcactgat tttttacctg 4560 agtcggccta gaaataaaca tgctagcttt tattccagtt ctaaccaaaa aaataaaccc 4620 tcgttccaca gaagctgcca tcaagtattt cctcacgcaa gcaaccgcat ccataatcct 4680 tctaatagct atcctcttca acaatatact ctccggacaa tgaaccataa ccaatactac 4740 caatcaatac tcatcattaa taatcataat ggctatagca ataaaactag gaatagcccc 4800 ctttcacttc tgagtcccag aggttaccca aggcacccct ctgacatccg gcctgcttct 4860 tctcacatga caaaaactag cccccatctc aatcatatac caaatctctc cctcactaaa 4920 cgtaagcctt ctcctcactc tctcaatctt atccatcata gcaggcagtt gaggtggatt 4980 aaaccaaacc cagctacgca aaatcttagc atactcctca attacccaca taggatgaat 5040 aatagcagtt ctaccgtaca accctaacat aaccattctt aatttaacta tttatattat 5100 cctaactact accgcattcc tactactcaa cttaaactcc agcaccacga ccctactact 5160 atctcgcacc tgaaacaagc taacatgact aacaccctta attccatcca ccctcctctc 5220 cctaggaggc ctgcccccgc taaccggctt tttgcccaaa tgggccatta tcgaagaatt 5280 cacaaaaaac aatagcctca tcatccccac catcatagcc accatcaccc tccttaacct 5340 ctacttctac ctacgcctaa tctactccac ctcaatcaca ctactcccca tatctaacaa 5400 cgtaaaaata aaatgacagt ttgaacatac aaaacccacc ccactcctcc ccacactcat 5460 cgcccttacc acgctactcc tacctatctc cccttttata ctaataatct tatagaaatt 5520 taggttaaat acagaccaag agccttcaaa gccctcagta agttgcaata cttaatttct 5580 gtaacagcta aggactgcaa aaccccactc tgcatcaact gaacgcaaat cagccacttt 5640 aattaagcta agcccttact agaccaatgg gacttaaacc cacaaacact tagttaacag 5700 ctaagcaccc taatcaactg gcttcaatct acttctcccg ccgccgggaa aaaaggcggg 5760 agaagccccg gcaggtttga agctgcttct tcgaatttgc aattcaatat gaaaatcacc 5820 tcggagctgg taaaaagagg cctaacccct gtctttagat ttacagtcca atgcttcact 5880 cagccatttt acctcacccc cactgatgtt cgccgaccgt tgactattct ctacaaacca 5940 caaagacatt ggaacactat acctattatt cggcgcatga gctggagtcc taggcacagc 6000 tctaagcctc cttattcgag ccgagctggg ccagccaggc aaccttctag gtaacgacca 6060 catctacaac gttatcgtca cagcccatgc atttgtaata atcttcttca tagtaatacc 6120 catcataatc ggaggctttg gcaactgact agttccccta ataatcggtg cccccgatat 6180 ggcgttcccc cgcataaaca acataagctt ctgactctta cctccctctc tcctactcct 6240 gctcgcatct gctatagtgg aggccggggc aggaacaggt tgaacagtct accctccctt 6300 agcagggaac tactcccacc ctggagcctc cgtagaccta accatcttct ccttacacct 6360 agcaggtgtc tcctctatct taggggccat caatttcatc acaacaatta tcaatataaa 6420 accccctgcc ataacccaat accaaacgcc cctcttcgtc tgatccgtcc taatcacagc 6480 agtcctactt ctcctatctc tcccagtcct agctgctggc atcactatac tactaacaga 6540 ccgcaacctc aacaccacct tcttcgaccc cgccggagga ggagacccca ttctatacca 6600 acacctattc tgatttttcg gtcaccctga agtttatatt cttatcctac caggcttcgg 6660 aataatctcc catattgtaa cttactactc cggaaaaaaa gaaccatttg gatacatagg 6720 tatggtctga gctatgatat caattggctt cctagggttt atcgtgtgag cacaccatat 6780 atttacagta ggaatagacg tagacacacg agcatacttc acctccgcta ccataatcat 6840 cgctatcccc accggcgtca aagtatttag ctgactcgcc acactccacg gaagcaatat 6900 gaaatgatct gctgcagtgc tctgagccct aggattcatc tttcttttca ccgtaggtgg 6960 cctgactggc attgtattag caaactcatc actagacatc gtactacacg acacgtacta 7020 cgttgtagct cacttccact atgtcctatc aataggagct gtatttgcca tcataggagg 7080 cttcattcac tgatttcccc tattctcagg ctacacccta gaccaaacct acgccaaaat 7140 ccatttcgct atcatattca tcggcgtaaa tctaactttc ttcccacaac actttctcgg 7200 cctatccgga atgccccgac gttactcgga ctaccccgat gcatacacca catgaaatat 7260 cctatcatct gtaggctcat tcatttctct aacagcagta atattaataa ttttcatgat 7320 ttgagaagcc ttcgcttcga agcgaaaagt cctaatagta gaagaaccct ccataaacct 7380 ggagtgacta tatggatgcc ccccacccta ccacacattc gaagaacccg tatacataaa 7440 atctagacaa aaaaggaagg aatcgaaccc cccaaagctg gtttcaagcc aaccccatgg 7500 cctccatgac tttttcaaaa agatattaga aaaaccattt cataactttg tcaaagttaa 7560 attataggct aaatcctata tatcttaatg gcacatgcag cgcaagtagg tctacaagac 7620 gctacttccc ctatcataga agagcttatc acctttcatg atcacgccct cataatcatt 7680 ttccttatct gcttcctagt cctgtatgcc cttttcctaa cactcacaac aaaactaact 7740 aatactaaca tctcagacgc tcaggaaata gaaaccgtct gaactatcct gcccgccatc 7800 atcctagtcc tcatcgccct cccatcccta cgcatccttt acataacaga cgaggtcaac 7860 gatccctccc ttaccatcaa atcaattggc caccaatggt actgaaccta cgagtacacc 7920 gactacggcg gactaatctt caactcctac atacttcccc cattattcct agaaccaggc 7980 gacctgcgac tccttgacgt tgacaatcga gtagtactcc cgattgaaac ccccattcgt 8040 ataataatta catcacaaga cgtcttgcac tcatgagctg tccccacatt aggcttaaaa 8100 acagatgcaa ttccaggacg tctaaaccaa accactttca ccgctacacg accaggggta 8160 tactacggtc aatgctctga aatctgtgga gcaaaccaca gtttcatgcc catcgtccta 8220 gaattaattc ccctaaaaat ctttgaaata ggacccgtat ttaccctata gcaccccctc 8280 taccccctct agagcccact gtaaagctaa cttagcatta accttttaag ttaaagatta 8340 agagaaccaa cacctcttta cagtgaaatg ccccaactaa atactaccgt atggcccacc 8400 ataattaccc ccatactcct tacactattc ctcatcaccc aactaaaaat attaaacaca 8460 aactaccact tacctccctc accaaagccc ataaaaataa aaaattataa caaaccctga 8520 gaaccaaaat gaacgaaaat ctgttcgctt cattcattgc ccccacaatc ctaggcctac 8580 ccgccgcagt actgatcatt ctatttcccc ctctattgat ccccacctcc aaatatctca 8640 tcaacaaccg actaattacc acccaacaat gactaatcaa actaacctca aaacaaatga 8700 tagccataca caacactaaa ggacgaacct gatctcttat actagtatcc ttaatcattt 8760 ttattgccac aactaacctc ctcggactcc tgcctcactc atttacacca accacccaac 8820 tatctataaa cctagccatg gccatcccct tatgagcggg cgcagtgatt ataggctttc 8880 gctctaagat taaaaatgcc ctagcccact tcttaccaca aggcacacct acacccctta 8940 tccccatact agttattatc gaaaccatca gcctactcat tcaaccaata gccctggccg 9000 tacgcctaac cgctaacatt actgcaggcc acctactcat gcatctaatt ggaagcgcca 9060 ccctagcaat atcaaccatt aaccttccct ctacacttat catcttcaca attctaattc 9120 tactgactat cctagaaatc gctgtcgcct taatccaagc ctacgttttc acacttctag 9180 taagcctcta cctgcacgac aacacataat gacccaccaa tcacatgcct atcatatagt 9240 aaaacccagc ccatgacccc taacaggggc cctctcagcc ctcctaatga cctccggcct 9300 agccatgtga tttcacttcc actccataac gctcctcata ctaggcctgc taaccaacac 9360 actaaccata taccaatgat ggcgcgatgt aacacgagaa agcacatacc aaggccacca 9420 cacaccacct gtccaaaaag gccttcgata cgggataatc ctatttatta cctcagaagt 9480 ttttttcttc gcaggatttt tctgagcctt ttaccactcc agcctagccc ctacccccca 9540 actaggaggg cactggcccc caacaggcat caccccgcta aatcccctag aagtcccact 9600 cctaaacaca tccgtattac tcgcatcagg agtatcaatc acctgagctc accatagtct 9660 aatagaaaac aaccgaaacc aaataattca agcactgctt attacaattt tactgggtct 9720 ctattttacc ctcctacaag cctcagagta cttcgaatct cccttcacca tttccgacgg 9780 catctacggc tcaacatttt ttgtagccac aggcttccac ggacttcacg tcattattgg 9840 ctcaactttc ctcactatct gcttcatccg ccaactaata tttcacttta catccaaaca 9900 tcactttggc ttcgaagccg ccgcctgata ctggcatttt gtagatgtgg tttgactatt 9960 tctgtatgtc tccatctatt gatgagggtc ttactctttt agtataaata gtaccgttaa 10020 cttccaatta actagttttg acaacattca aaaaagagta ataaacttcg ccttaatttt 10080 aataatcaac accctcctag ccttactact aataattatt acattttgac taccacaact 10140 caacggctac atagaaaaat ccacccctta cgagtgcggc ttcgacccta tatcccccgc 10200 ccgcgtccct ttctccataa aattcttctt agtagctatt accttcttat tatttgatct 10260 agaaattgcc ctccttttac ccctaccatg agccctacaa acaactaacc tgccactaat 10320 agttatgtca tccctcttat taatcatcat cctagcccta agtctggcct atgagtgact 10380 acaaaaagga ttagactgaa ccgaattggt atatagttta aacaaaacga atgatttcga 10440 ctcattaaat tatgataatc atatttacca aatgcccctc atttacataa atattatact 10500 agcatttacc atctcacttc taggaatact agtatatcgc tcacacctca tatcctccct 10560 actatgccta gaaggaataa tactatcgct attcattata gctactctca taaccctcaa 10620 cacccactcc ctcttagcca atattgtgcc tattgccata ctagtttttg ccgcctgcga 10680 agcagcggta ggcctagccc tactagtcgc aatctccaac acatatggcc tagactacgt 10740 acataaccta aacctactcc aatgctaaaa ctaatcgtcc caacaattat attactacca 10800 ctgacatgac tctccaaaaa acacataatt tgaatcaaca caaccaccca cagcctaatt 10860 attagcatca tccccctact attttttaac caaatcaaca acaacctatt tagctgctcc 10920 ccaacctttt cctccgaccc cctaacaacc cccctcctaa tactaactac ctgactccta 10980 cccctcacaa tcatggcaag ccaacgccac ttatccagtg aaccactatc acgaaaaaaa 11040 ctctacctct ctatactaat ctccctacaa atctccttaa ttataacatt cacagccaca 11100 gaactaatca tattttatat cttcttcgaa accacactta tccccacctt ggctatcatc 11160 acccgatgag gcaaccagcc agaacgcctg aacgcaggca catacttcct attctacacc 11220 ctagtaggct cccttcccct actcatcgca ctaatttaca ctcacaacac cctaggctca 11280 ctaaacattc tactactcac tctcactgcc caagaactat caaactcctg agccaacaac 11340 ttaatatgac tagcttacac aatagctttt atagtaaaga tacctcttta cggactccac 11400 ttatgactcc ctaaagccca tgtcgaagcc cccatcgctg ggtcaatagt acttgccgca 11460 gtactcttaa aactaggcgg ctatggtata atacgcctca cactcattct caaccccctg 11520 acaaaacaca tagcctaccc cttccttgta ctatccctat gaggcataat tataacaagc 11580 tccatctgcc tacgacaaac agacctaaaa tcgctcattg catactcttc aatcagccac 11640 atagccctcg tagtaacagc cattctcatc caaaccccct gaagcttcac cggcgcagtc 11700 attctcataa tcgcccacgg acttacatcc tcattactat tctgcctagc aaactcaaac 11760 tacgaacgca ctcacagtcg catcataatc ctctctcaag gacttcaaac tctactccca 11820 ctaatagctt tttgatgact tctagcaagc ctcgctaacc tcgccttacc ccccactatt 11880 aacctactgg gagaactctc tgtgctagta accacattct cctgatcaaa tatcactctc 11940 ctacttacag gactcaacat actagtcaca gccctatact ccctctacat atttaccaca 12000 acacaatgag gctcactcac ccaccacatt aacaacataa aaccctcatt cacacgagaa 12060 aacaccctca tgttcataca cctatccccc attctcctcc tatccctcaa ccccgacatc 12120 atcaccgggt tttcctcttg taaatatagt ttaaccaaaa catcagattg tgaatctgac 12180 aacagaggct tacgacccct tatttaccga gaaagctcac aagaactgct aactcatgcc 12240 cccatgtcta acaacatggc tttctcaact tttaaaggat aacagctatc cattggtctt 12300 aggccccaaa aattttggtg caactccaaa taaaagtaat aaccatgcac actactataa 12360 ccaccctaac cctgacttcc ctaattcccc ccatccttac caccctcgtt aaccctaaca 12420 aaaaaaactc atacccccat tatgtaaaat ccattgtcgc atccaccttt attatcagtc 12480 tcttccccac aacaatattc atgtgcctag accaagaagt tattatctcg aactgacact 12540 gagccacaac ccaaacaacc cagctctccc taagcttcaa actagactac ttctccataa 12600 tattcatccc tgtagcattg ttcgttacat ggtccatcat agaattctca ctgtgatata 12660 taaactcaga cccaaacatt aatcagttct tcaaatatct actcattttc ctaattacca 12720 tgctaatctt agttaccgct aacaacctat tccaactgtt catcggctga gagggcgtag 12780 gaattatatc cttcttgctc atcagttgat gatacgcccg agcagatgcc aacacagcag 12840 ccattcaagc aatcctatac aaccgtatcg gcgatatcgg tttcatcctc gccttagcat 12900 gatttatcct acactccaac tcatgagacc cacaacaaat agcccttcta aacgctaatc 12960 caagcctcac cccactacta ggcctcctcc tagcagcagc aggcaaatca gcccaattag 13020 gtctccaccc ctgactcccc tcagccatag aaggccccac cccagtctca gccctactcc 13080 actcaagcac tatagttgta gcaggagtct tcttactcat ccgcttccac cccctagcag 13140 aaaatagccc actaatccaa actctaacac tatgcttagg cgctatcacc actctgttcg 13200 cagcagtctg cgcccttaca caaaatgaca tcaaaaaaat cgtagccttc tccacttcaa 13260 gtcaactagg actcatagta gttacaatcg gcatcaacca accacaccta gcattcctgc 13320 acatctgtac ccacgccttc ttcaaagcca tactatttat gtgctccggg tccatcatcc 13380 acaaccttaa caatgaacaa gatattcgaa aaataggagg actactcaaa accatacctc 13440 tcacttcaac ctccctcacc attggcagcc tagcattagc aggaatacct ttcctcacag 13500 gtttctattc caaagaccac atcatcgaaa ccgcaaacat atcatacaca aacgcctgag 13560 ccctatctat tactctcatc gctacctccc tgacaagcgc ctatagcact cgaataattc 13620 ttctcaccct aacaggtcaa cctcgcttcc ctacccttac taacattaac gaaaataacc 13680 ccaccctact aaaccccatt aaacgcctgg cagccggaag cctattcgca ggatttctca 13740 ttactaacaa catttccccc acatccccct tccaaacaac aatccccctc tacctaaaac 13800 tcacagccct cgctgtcact ttcctaggac ttctaacagc cctagacctc aactacctaa 13860 ccaacaaact taaaataaaa tccccactat gcacatttta tttctccaac atactcggat 13920 tctaccctag catcacacac cgcacaatcc cctatctagg ccttcttacg agccaaaacc 13980 tgcccctact cctcctagac ctaacctgac tagaaaagct attacctaaa acaatttcac 14040 agcaccaaat ctccacctcc atcatcacct caacccaaaa aggcataatt aaactttact 14100 tcctctcttt cttcttccca ctcatcctaa ccctactcct aatcacataa cctattcccc 14160 cgagcaatct caattacaat atatacacca acaaacaatg ttcaaccagt aactactact 14220 aatcaacgcc cataatcata caaagccccc gcaccaatag gatcctcccg aatcaaccct 14280 gacccctctc cttcataaat tattcagctt cctacactat taaagtttac cacaaccacc 14340 accccatcat actctttcac ccacagcacc aatcctacct ccatcgctaa ccccactaaa 14400 acactcacca agacctcaac ccctgacccc catgcctcag gatactcctc aatagccatc 14460 gctgtagtat atccaaagac aaccatcatt ccccctaaat aaattaaaaa aactattaaa 14520 cccatataac ctcccccaaa attcagaata ataacacacc cgaccacacc gctaacaatc 14580 aatactaaac ccccataaat aggagaaggc ttagaagaaa accccacaaa ccccattact 14640 aaacccacac tcaacagaaa caaagcatac atcattattc tcgcacggac tacaaccacg 14700 accaatgata tgaaaaacca tcgttgtatt tcaactacaa gaacaccaat gaccccaata 14760 cgcaaaatta accccctaat aaaattaatt aaccactcat tcatcgacct ccccacccca 14820 tccaacatct ccgcatgatg aaacttcggc tcactccttg gcgcctgcct gatcctccaa 14880 atcaccacag gactattcct agccatgcac tactcaccag acgcctcaac cgccttttca 14940 tcaatcgccc acatcactcg agacgtaaat tatggctgaa tcatccgcta ccttcacgcc 15000 aatggcgcct caatattctt tatctgcctc ttcctacaca tcgggcgagg cctatattac 15060 ggatcatttc tctactcaga aacctgaaac atcggcatta tcctcctgct tgcaactata 15120 gcaacagcct tcataggcta tgtcctcccg tgaggccaaa tatcattctg aggggccaca 15180 gtaattacaa acttactatc cgccatccca tacattggaa cagacctagt tcaatgaatc 15240 tgaggaggct actcagtaga cagtcccacc ctcacacgat tctttacctt tcacttcatc 15300 ttgcccttca ttattacagc cctagcagca ctccacctcc tattcttgca cgaaacggga 15360 tcaaacaacc ccctaggaat cacctcccat tccgataaaa tcaccttcca cccttactac 15420 acaatcaaag acgccctcgg cttacttctc ttccttctct ccttaataac attaacacta 15480 ctctcaccag acctcctagg cgacccagac aattataccc tagccaaccc cttaaacacc 15540 cctccccaca tcaagcccga atgatatttc ctattcgcct acacaattct ccgatccgtc 15600 cctaacaaac taggaggcgt ccttgcccta ttactatcca tcctcatcct agcaataatc 15660 cccatcctcc atatatccaa acaacaaagc ataatatttc gcccactaag ccaatcactt 15720 tattgactcc tagccgcaga cctcctcatt ctaacctgaa tcggaggaca accagtaagc 15780 taccctttta ccatcattgg acaagtagca tccgtactat acttcacaac aatcctaatc 15840 ctaataccaa ctatctccct aattgaaaac aaaatactca aatgggcctg tccttgtagt 15900 ataaactaat acaccagtct tgtaaaccgg aaatgaaaac ctctttccaa ggacaaatca 15960 gagaaaaagt ctttaactcc accattagca cccaaagcta agattctaat ttaaactatt 16020 ctctgttctt tcatggggaa gcagatttgg gtaccaccca agtattgact cacccatcaa 16080 caaccgctat gtatttcgta cattactgcc agccaccatg aatattgtac agtaccataa 16140 atacttgacc acctgtagta cataaaaacc caatccacat taaaaccctc cccccatgct 16200 tacaagcaag tacagcaatc aaccttcaac tgtcacacat caaccgcaac tccaaagcca 16260 cccctcaccc actaggatac caacaaacct acccaccctt aacagtacat agcacataaa 16320 gccatttacc gtacatagca cattacagtc aaatcccttc tcgtccccat ggatgacccc 16380 cctcagatag gggtcccttg gccaccatcc tccgtgaaat caatatcccg cacaagagtg 16440 ctactctcct cgctccgggc ccataacact tgggggtagc taaagtgaac tgtatccgac 16500 atctggttcc tacttcaggg ccataaagcc taaatagccc acacgttccc cttaaataag 16560 acatcacgat g 16571 // ID KC345800; SV 1; circular; genomic DNA; STD; HUM; 16569 BP. XX AC KC345800; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT6_187 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16569 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16569 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; 8777957620e4bc1c9e8a6f6ce22319b8. DR Ensembl-Gn; ENSG00000198840; homo_sapiens. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Tr; ENST00000361227; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16569 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT6_187" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="Buga" FT /db_xref="taxon:9606" FT /haplogroup="L0d1" FT D-loop complement(join(16024..16569,1..576)) FT tRNA 577..647 FT /product="tRNA-Phe" FT rRNA 648..1601 FT /product="12S ribosomal RNA" FT tRNA 1602..1670 FT /product="tRNA-Val" FT rRNA 1671..3229 FT /product="16S ribosomal RNA" FT tRNA 3230..3304 FT /product="tRNA-Leu" FT gene 3307..4262 FT /gene="ND1" FT CDS 3307..4262 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4261..4262,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q4GRH9" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:Q4GRH9" FT /protein_id="AGD82355.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPTTISSIPPQT" FT tRNA 4263..4331 FT /product="tRNA-Ile" FT tRNA complement(4329..4400) FT /product="tRNA-Gln" FT tRNA 4402..4469 FT /product="tRNA-Met" FT gene 4470..5511 FT /gene="ND2" FT CDS 4470..5511 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5511,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82356.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5512..5576 FT /product="tRNA-Trp" FT tRNA complement(5587..5655) FT /product="tRNA-Ala" FT tRNA complement(5657..5729) FT /product="tRNA-Asn" FT tRNA complement(5761..5826) FT /product="tRNA-Cys" FT tRNA complement(5826..5891) FT /product="tRNA-Tyr" FT gene 5904..7445 FT /gene="COX1" FT CDS 5904..7445 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B1J9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B1J9" FT /protein_id="AGD82357.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7445..7516) FT /product="tRNA-Ser" FT tRNA 7518..7585 FT /product="tRNA-Asp" FT gene 7586..8269 FT /gene="COX2" FT CDS 7586..8269 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /db_xref="GOA:Q9B1F9" FT /db_xref="InterPro:IPR001505" FT /db_xref="InterPro:IPR002429" FT /db_xref="InterPro:IPR008972" FT /db_xref="InterPro:IPR011759" FT /db_xref="InterPro:IPR014222" FT /db_xref="InterPro:IPR034210" FT /db_xref="InterPro:IPR036257" FT /db_xref="UniProtKB/TrEMBL:Q9B1F9" FT /protein_id="AGD82358.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIETPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8295..8364 FT /product="tRNA-Lys" FT gene 8366..8572 FT /gene="ATP8" FT CDS 8366..8572 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82359.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8527..9207 FT /gene="ATP6" FT CDS 8527..9207 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B185" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B185" FT /protein_id="AGD82360.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9207..9990 FT /gene="COX3" FT CDS 9207..9990 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9990,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82361.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9991..10058 FT /product="tRNA-Gly" FT gene 10059..10404 FT /gene="ND3" FT CDS 10059..10404 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10404,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXZ5" FT /db_xref="InterPro:IPR000440" FT /db_xref="InterPro:IPR038430" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ5" FT /protein_id="AGD82362.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWTE" FT tRNA 10405..10469 FT /product="tRNA-Arg" FT gene 10470..10766 FT /gene="ND4L" FT CDS 10470..10766 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:E2FR42" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:E2FR42" FT /protein_id="AGD82363.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVAISNTYGLDYVHNLNLLQC" FT gene 10760..12137 FT /gene="ND4" FT CDS 10760..12137 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12137,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82364.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12138..12206 FT /product="tRNA-His" FT tRNA 12207..12265 FT /product="tRNA-Ser" FT tRNA 12266..12336 FT /product="tRNA-Leu" FT gene 12337..14148 FT /gene="ND5" FT CDS 12337..14148 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q4F0F4" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q4F0F4" FT /protein_id="AGD82365.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPTSPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14149..14673) FT /gene="ND6" FT CDS complement(14149..14673) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82366.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14674..14742) FT /product="tRNA-Glu" FT gene 14747..15887 FT /gene="CYTB" FT CDS 14747..15887 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15887,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q15H14" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q15H14" FT /protein_id="AGD82367.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIITALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLLSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15888..15953 FT /product="tRNA-Thr" FT tRNA complement(15955..16023) FT /product="tRNA-Pro" XX SQ Sequence 16569 BP; 5133 A; 5185 C; 2163 G; 4088 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcggac atacctacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tattttcccc tcccactccc atactactaa 480 tctcatcaat acaaccccgc ccatcctacc cagcacacac acaccgctgc taaccccata 540 ccccgaacca accaaacccc aaagacaccc cccacagttt atgtagctta cctcctcaaa 600 gcaatacact gaaaatgttt agacgggctc acatcacccc ataaacaaat aggtttggtc 660 ctagcctttc tattagctct tagtaagatt acacatgcaa gcatccccgt tccagtgaat 720 tcaccctcta aatcaccacg atcaaaaggg acaagcatca agcacgcaac aatgcagctc 780 aaaacgctta gcctagccac acccccacgg gaaacagcag tgataaacct ttagcaataa 840 acgaaagttt aactaagcta tactaacccc agggttggtc aatttcgtgc cagccaccgc 900 ggtcacacga ttaacccaag tcaatagaag ccggcgtaaa gagtgtttta gatcaccccc 960 tccccaataa agctaaaact cacctgagtt gtaaaaaact ccagttgaca caaaataaac 1020 tacgaaagtg gctttaacat atctgaatac acaatagcta agacccaaac tgggattaga 1080 taccccacta tgcttagccc taaacctcaa cagttaaatc aacaaaactg ctcgccagaa 1140 cactacgagc cacagcttaa aactcaaagg acctggcggt gcttcatatc cctctagagg 1200 agcctgttct gtaatcgata aaccccgatc aacctcacca cctcttgctc agcctatata 1260 ccgccatctt cagcaaaccc tgatgaaggc tacaaagtaa gcgcaagtac ccacgtaaag 1320 acgttaggtc aaggtgtagc ccatgaggtg gcaagaaatg ggctacattt tctaccccag 1380 aaaactacga tagcccttat gaaacttaag ggtcgaaggt ggatttagca gtaaactaag 1440 agtagagtgc ttagttgaac agggccctga agcgcgtaca caccgcccgt caccctcctc 1500 aagtatactt caaaggacat ttaactaaaa cccctacgca tttatataga ggagacaagt 1560 cgtaacatgg taagtgtact ggaaagtgca cttggacgaa ccagagtgta gcttaacaca 1620 aagcacccaa cttacactta ggagatttca acttaacttg accgctctga gctaaaccta 1680 gccccaaacc cactccacct tactaccaga caaccttagc caaaccattt acccaaataa 1740 agtataggcg atagaaattg aaacctggcg caatagatat agtaccgcaa gggaaagatg 1800 aaaaattata accaagcata atatagcaag gactaacccc tataccttct gcataatgaa 1860 ttaactagaa ataactttgc aaggagagcc aaagctaaga cccccgaaac cagacgagct 1920 acctaagaac agctaaaaga gcacacccgt ctatgtagca aaatagtggg aagatttata 1980 ggtagaggcg acaaacctac cgagcctggt gatagctggt tgtccaagat agaatcttag 2040 ttcaacttta aatttgccca cagaaccctc taaatcccct tgtaaattta actgttagtc 2100 caaagaggaa cagctctttg gacactagga aaaaaccttg tagagagagt aaaaaattta 2160 acacccatag taggcctaaa agcagccacc aattaagaaa gcgttcaagc tcaacaccca 2220 ctacctaaaa aatcccaaac atataactga actcctcaca cccaattgga ccaatctatc 2280 accctataga agaactaatg ttagtataag taacatgaaa acattctcct ccgcataagc 2340 ctgcgtcaga ttaaaacact gaactgacaa ttaacagccc aatatctaca atcaaccaac 2400 aagtcattat taccctcact gtcaacccaa cacaggcatg ctcataagga aaggttaaaa 2460 aaagtaaaag gaactcggca aatccttacc ccgcctgttt accaaaaaca tcacctctag 2520 catcaccagt attagaggca ccgcctgccc agtgacacat gtttaacggc cgcggtaccc 2580 taaccgtgca aaggtagcat aatcacttgt tccttaaata gggacctgta tgaatggctc 2640 cacgagggtt cagctgtctc ttacttttaa ccagtgaaat tgacctgccc gtgaagaggc 2700 gggcataaca cagcaagacg agaagaccct atggagcttt aatttattaa tgcaaacaat 2760 acctaacaaa cccacaggtc ctaaactacc aaacctgcat taaaaatttc ggttggggcg 2820 acctcggagc agaacccaac ctccgagcag tacatgctaa gacttcacca gtcaaagcga 2880 actaccatac tcaattgatc caataacttg accaacggaa caagttaccc tagggataac 2940 agcgcaatcc tattctagag tccatatcaa caatagggtt tacgacctcg atgttggatc 3000 aggacatccc gatggtgcag ccgctattaa aggttcgttt gttcaacgat taaagtccta 3060 cgtgatctga gttcagaccg gagtaatcca ggtcggtttc tatctacttc aaattcctcc 3120 ctgtacgaaa ggacaagaga aataaggcct acttcacaaa gcgccttccc ccgtaaatga 3180 tatcatctca acttagtatt atacccacac ccacccaaga acagggtttg ttaagatggc 3240 agagcccggt aatcgcataa aacttaaaac tttacagtca gaggttcaat tcctcttctt 3300 aacaacatac ccatggccaa cctcctactc ctcattgtac ccattctaat cgcaatggca 3360 ttcctaatgc ttaccgaacg aaaaattcta ggctatatac aactacgcaa aggccccaac 3420 gttgtaggcc cctacggact actacaaccc ttcgctgacg ccataaaact cttcaccaaa 3480 gagcccctaa aacccgccac atctaccatc accctataca tcaccgcccc aaccttagct 3540 ctcaccatcg ctcttctact atgaaccccc ctccccatac ccaaccccct ggttaacctc 3600 aacctaggcc tcctattcat tctagccacc tctagcctag ccgtttactc aatcctctga 3660 tcagggtgag catcaaactc aaactacgcc ctgatcggcg cactgcgagc agtagcccaa 3720 acaatctcat atgaagtcac cctagccatc attctgctat caacattact aataagtggc 3780 tcctttaacc tctccaccct tatcacaaca caagaacacc tctgattact cctgccatca 3840 tgacccttgg ccataatatg atttatctcc acactagcag agaccaaccg aacccccttc 3900 gaccttgccg aaggggagtc cgaactagtc tcaggcttca acatcgaata cgccgcaggc 3960 cccttcgccc tattcttcat agccgaatac acaaacatta ttataataaa caccctcacc 4020 actacaatct tcctaggaac aacatatgac gcactctccc ctgaactcta cacaacatat 4080 tttgtcacca agaccctact tctgacctcc ctgttcttat gaattcgaac agcatacccc 4140 cgattccgct acgaccaact catacacctc ctatgaaaaa acttcctacc actcacccta 4200 gcattactta tatgatatgt ctccataccc actacaatct ccagcattcc ccctcaaacc 4260 taagaaatat gtctgataaa agagttactt tgatagagta aataatagga gtttaaaccc 4320 ccttatttct aggactatga gaatcgaacc catccctgag aatccaaaat tctccgtgcc 4380 acctatcaca ccccatccta aagtaaggtc agctaaataa gctatcgggc ccataccccg 4440 aaaatgttgg ttataccctt cccgtactaa ttaatcccct ggcccaaccc gtcatctact 4500 ctaccatctt tgcaggcaca ctcatcacag cgctaagctc gcactgattt tttacctgag 4560 tcggcctaga aataaacatg ctagctttta ttccagttct aaccaaaaaa ataaaccctc 4620 gttccacaga agctgccatc aagtatttcc tcacgcaagc aaccgcatcc ataatccttc 4680 taatagctat cctcttcaac aatatactct ccggacaatg aaccataacc aatactacca 4740 atcaatactc atcattaata atcataatgg ctatagcaat aaaactagga atagccccct 4800 ttcacttctg agtcccagag gttacccaag gcacccctct gacatccggc ctgcttcttc 4860 tcacatgaca aaaactagcc cccatctcaa tcatatacca aatctctccc tcactaaacg 4920 taagccttct cctcactctc tcaatcttat ccatcatagc aggcagttga ggtggattaa 4980 accaaaccca gctacgcaaa atcttagcat actcctcaat tacccacata ggatgaataa 5040 tagcagttct accgtacaac cctaacataa ccattcttaa tttaactatt tatattatcc 5100 taactactac cgcattccta ctactcaact taaactccag caccacgacc ctactactat 5160 ctcgcacctg aaacaagcta acatgactaa cacccttaat tccatccacc ctcctctccc 5220 taggaggcct gcccccgcta accggctttt tgcccaaatg ggccattatc gaagaattca 5280 caaaaaacaa tagcctcatc atccccacca tcatagccac catcaccctc cttaacctct 5340 acttctacct acgcctaatc tactccacct caatcacact actccccata tctaacaacg 5400 taaaaataaa atgacagttt gaacatacaa aacccacccc actcctcccc acactcatcg 5460 cccttaccac gctactccta cctatctccc cttttatact aataatctta tagaaattta 5520 ggttaaatac agaccaagag ccttcaaagc cctcagtaag ttgcaatact taatttctgt 5580 aacagctaag gactgcaaaa ccccactctg catcaactga acgcaaatca gccactttaa 5640 ttaagctaag cccttactag accaatggga cttaaaccca caaacactta gttaacagct 5700 aagcacccta atcaactggc ttcaatctac ttctcccgcc gccgggaaaa aaggcgggag 5760 aagccccggc aggtttgaag ctgcttcttc gaatttgcaa ttcaatatga aaatcacctc 5820 ggagctggta aaaagaggcc taacccctgt ctttagattt acagtccaat gcttcactca 5880 gccattttac ctcaccccca ctgatgttcg ccgaccgttg actattctct acaaaccaca 5940 aagacattgg aacactatac ctattattcg gcgcatgagc tggagtccta ggcacagctc 6000 taagcctcct tattcgagcc gagctgggcc agccaggcaa ccttctaggt aacgaccaca 6060 tctacaacgt tatcgtcaca gcccatgcat ttgtaataat cttcttcata gtaataccca 6120 tcataatcgg aggctttggc aactgactag ttcccctaat aatcggtgcc cccgatatgg 6180 cgttcccccg cataaacaac ataagcttct gactcttacc tccctctctc ctactcctgc 6240 tcgcatctgc tatagtggag gccggggcag gaacaggttg aacagtctac cctcccttag 6300 cagggaacta ctcccaccct ggagcctccg tagacctaac catcttctcc ttacacctag 6360 caggtgtctc ctctatctta ggggccatca atttcatcac aacaattatc aatataaaac 6420 cccctgccat aacccaatac caaacgcccc tcttcgtctg atccgtccta atcacagcag 6480 tcctacttct cctatctctc ccagtcctag ctgctggcat cactatacta ctaacagacc 6540 gcaacctcaa caccaccttc ttcgaccccg ccggaggagg agaccccatt ctataccaac 6600 acctattctg atttttcggt caccctgaag tttatattct tatcctacca ggcttcggaa 6660 taatctccca tattgtaact tactactccg gaaaaaaaga accatttgga tacataggta 6720 tggtctgagc tatgatatca attggcttcc tagggtttat cgtgtgagca caccatatat 6780 ttacagtagg aatagacgta gacacacgag catacttcac ctccgctacc ataatcatcg 6840 ctatccccac cggcgtcaaa gtatttagct gactcgccac actccacgga agcaatatga 6900 aatgatctgc tgcagtgctc tgagccctag gattcatctt tcttttcacc gtaggtggcc 6960 tgactggcat tgtattagca aactcatcac tagacatcgt actacacgac acgtactacg 7020 ttgtagctca cttccactat gtcctatcaa taggagctgt atttgccatc ataggaggct 7080 tcattcactg atttccccta ttctcaggct acaccctaga ccaaacctac gccaaaatcc 7140 atttcgctat catattcatc ggcgtaaatc taactttctt cccacaacac tttctcggcc 7200 tatccggaat gccccgacgt tactcggact accccgatgc atacaccaca tgaaatatcc 7260 tatcatctgt aggctcattc atttctctaa cagcagtaat attaataatt ttcatgattt 7320 gagaagcctt cgcttcgaag cgaaaagtcc taatagtaga agaaccctcc ataaacctgg 7380 agtgactata tggatgcccc ccaccctacc acacattcga agaacccgta tacataaaat 7440 ctagacaaaa aaggaaggaa tcgaaccccc caaagctggt ttcaagccaa ccccatggcc 7500 tccatgactt tttcaaaaag atattagaaa aaccatttca taactttgtc aaagttaaat 7560 tataggctaa atcctatata tcttaatggc acatgcagcg caagtaggtc tacaagacgc 7620 tacttcccct atcatagaag agcttatcac ctttcatgat cacgccctca taatcatttt 7680 ccttatctgc ttcctagtcc tgtatgccct tttcctaaca ctcacaacaa aactaactaa 7740 tactaacatc tcagacgctc aggaaataga aaccgtctga actatcctgc ccgccatcat 7800 cctagtcctc atcgccctcc catccctacg catcctttac ataacagacg aggtcaacga 7860 tccctccctt accatcaaat caattggcca ccaatggtac tgaacctacg agtacaccga 7920 ctacggcgga ctaatcttca actcctacat acttccccca ttattcctag aaccaggcga 7980 cctgcgactc cttgacgttg acaatcgagt agtactcccg attgaaaccc ccattcgtat 8040 aataattaca tcacaagacg tcttgcactc atgagctgtc cccacattag gcttaaaaac 8100 agatgcaatt ccaggacgtc taaaccaaac cactttcacc gctacacgac caggggtata 8160 ctacggtcaa tgctctgaaa tctgtggagc aaaccacagt ttcatgccca tcgtcctaga 8220 attaattccc ctaaaaatct ttgaaatagg acccgtattt accctatagc accccctcta 8280 ccccctctag agcccactgt aaagctaact tagcattaac cttttaagtt aaagattaag 8340 agaaccaaca cctctttaca gtgaaatgcc ccaactaaat actaccgtat ggcccaccat 8400 aattaccccc atactcctta cactattcct catcacccaa ctaaaaatat taaacacaaa 8460 ctaccactta cctccctcac caaagcccat aaaaataaaa aattataaca aaccctgaga 8520 accaaaatga acgaaaatct gttcgcttca ttcattgccc ccacaatcct aggcctaccc 8580 gccgcagtac tgatcattct atttccccct ctattgatcc ccacctccaa atatctcatc 8640 aacaaccgac taattaccac ccaacaatga ctaatcaaac taacctcaaa acaaatgata 8700 gccatacaca acactaaagg acgaacctga tctcttatac tagtatcctt aatcattttt 8760 attgccacaa ctaacctcct cggactcctg cctcactcat ttacaccaac cacccaacta 8820 tctataaacc tagccatggc catcccctta tgagcgggcg cagtgattat aggctttcgc 8880 tctaagatta aaaatgccct agcccacttc ttaccacaag gcacacctac accccttatc 8940 cccatactag ttattatcga aaccatcagc ctactcattc aaccaatagc cctggccgta 9000 cgcctaaccg ctaacattac tgcaggccac ctactcatgc atctaattgg aagcgccacc 9060 ctagcaatat caaccattaa ccttccctct acacttatca tcttcacaat tctaattcta 9120 ctgactatcc tagaaatcgc tgtcgcctta atccaagcct acgttttcac acttctagta 9180 agcctctacc tgcacgacaa cacataatga cccaccaatc acatgcctat catatagtaa 9240 aacccagccc atgaccccta acaggggccc tctcagccct cctaatgacc tccggcctag 9300 ccatgtgatt tcacttccac tccataacgc tcctcatact aggcctgcta accaacacac 9360 taaccatata ccaatgatgg cgcgatgtaa cacgagaaag cacataccaa ggccaccaca 9420 caccacctgt ccaaaaaggc cttcgatacg ggataatcct atttattacc tcagaagttt 9480 ttttcttcgc aggatttttc tgagcctttt accactccag cctagcccct accccccaac 9540 taggagggca ctggccccca acaggcatca ccccgctaaa tcccctagaa gtcccactcc 9600 taaacacatc cgtattactc gcatcaggag tatcaatcac ctgagctcac catagtctaa 9660 tagaaaacaa ccgaaaccaa ataattcaag cactgcttat tacaatttta ctgggtctct 9720 attttaccct cctacaagcc tcagagtact tcgaatctcc cttcaccatt tccgacggca 9780 tctacggctc aacatttttt gtagccacag gcttccacgg acttcacgtc attattggct 9840 caactttcct cactatctgc ttcatccgcc aactaatatt tcactttaca tccaaacatc 9900 actttggctt cgaagccgcc gcctgatact ggcattttgt agatgtggtt tgactatttc 9960 tgtatgtctc catctattga tgagggtctt actcttttag tataaatagt accgttaact 10020 tccaattaac tagttttgac aacattcaaa aaagagtaat aaacttcgcc ttaattttaa 10080 taatcaacac cctcctagcc ttactactaa taattattac attttgacta ccacaactca 10140 acggctacat agaaaaatcc accccttacg agtgcggctt cgaccctata tcccccgccc 10200 gcgtcccttt ctccataaaa ttcttcttag tagctattac cttcttatta tttgatctag 10260 aaattgccct ccttttaccc ctaccatgag ccctacaaac aactaacctg ccactaatag 10320 ttatgtcatc cctcttatta atcatcatcc tagccctaag tctggcctat gagtgactac 10380 aaaaaggatt agactgaacc gaattggtat atagtttaaa caaaacgaat gatttcgact 10440 cattaaatta tgataatcat atttaccaaa tgcccctcat ttacataaat attatactag 10500 catttaccat ctcacttcta ggaatactag tatatcgctc acacctcata tcctccctac 10560 tatgcctaga aggaataata ctatcgctat tcattatagc tactctcata accctcaaca 10620 cccactccct cttagccaat attgtgccta ttgccatact agtttttgcc gcctgcgaag 10680 cagcggtagg cctagcccta ctagtcgcaa tctccaacac atatggccta gactacgtac 10740 ataacctaaa cctactccaa tgctaaaact aatcgtccca acaattatat tactaccact 10800 gacatgactc tccaaaaaac acataatttg aatcaacaca accacccaca gcctaattat 10860 tagcatcatc cccctactat tttttaacca aatcaacaac aacctattta gctgctcccc 10920 aaccttttcc tccgaccccc taacaacccc cctcctaata ctaactacct gactcctacc 10980 cctcacaatc atggcaagcc aacgccactt atccagtgaa ccactatcac gaaaaaaact 11040 ctacctctct atactaatct ccctacaaat ctccttaatt ataacattca cagccacaga 11100 actaatcata ttttatatct tcttcgaaac cacacttatc cccaccttgg ctatcatcac 11160 ccgatgaggc aaccagccag aacgcctgaa cgcaggcaca tacttcctat tctacaccct 11220 agtaggctcc cttcccctac tcatcgcact aatttacact cacaacaccc taggctcact 11280 aaacattcta ctactcactc tcactgccca agaactatca aactcctgag ccaacaactt 11340 aatatgacta gcttacacaa tagcttttat agtaaagata cctctttacg gactccactt 11400 atgactccct aaagcccatg tcgaagcccc catcgctggg tcaatagtac ttgccgcagt 11460 actcttaaaa ctaggcggct atggtataat acgcctcaca ctcattctca accccctgac 11520 aaaacacata gcctacccct tccttgtact atccctatga ggcataatta taacaagctc 11580 catctgccta cgacaaacag acctaaaatc gctcattgca tactcttcaa tcagccacat 11640 agccctcgta gtaacagcca ttctcatcca aaccccctga agcttcaccg gcgcagtcat 11700 tctcataatc gcccacggac ttacatcctc attactattc tgcctagcaa actcaaacta 11760 cgaacgcact cacagtcgca tcataatcct ctctcaagga cttcaaactc tactcccact 11820 aatagctttt tgatgacttc tagcaagcct cgctaacctc gccttacccc ccactattaa 11880 cctactggga gaactctctg tgctagtaac cacattctcc tgatcaaata tcactctcct 11940 acttacagga ctcaacatac tagtcacagc cctatactcc ctctacatat ttaccacaac 12000 acaatgaggc tcactcaccc accacattaa caacataaaa ccctcattca cacgagaaaa 12060 caccctcatg ttcatacacc tatcccccat tctcctccta tccctcaacc ccgacatcat 12120 caccgggttt tcctcttgta aatatagttt aaccaaaaca tcagattgtg aatctgacaa 12180 cagaggctta cgacccctta tttaccgaga aagctcacaa gaactgctaa ctcatgcccc 12240 catgtctaac aacatggctt tctcaacttt taaaggataa cagctatcca ttggtcttag 12300 gccccaaaaa ttttggtgca actccaaata aaagtaataa ccatgcacac tactataacc 12360 accctaaccc tgacttccct aattcccccc atccttacca ccctcgttaa ccctaacaaa 12420 aaaaactcat acccccatta tgtaaaatcc attgtcgcat ccacctttat tatcagtctc 12480 ttccccacaa caatattcat gtgcctagac caagaagtta ttatctcgaa ctgacactga 12540 gccacaaccc aaacaaccca gctctcccta agcttcaaac tagactactt ctccataata 12600 ttcatccctg tagcattgtt cgttacatgg tccatcatag aattctcact gtgatatata 12660 aactcagacc caaacattaa tcagttcttc aaatatctac tcattttcct aattaccatg 12720 ctaatcttag ttaccgctaa caacctattc caactgttca tcggctgaga gggcgtagga 12780 attatatcct tcttgctcat cagttgatga tacgcccgag cagatgccaa cacagcagcc 12840 attcaagcaa tcctatacaa ccgtatcggc gatatcggtt tcatcctcgc cttagcatga 12900 tttatcctac actccaactc atgagaccca caacaaatag cccttctaaa cgctaatcca 12960 agcctcaccc cactactagg cctcctccta gcagcagcag gcaaatcagc ccaattaggt 13020 ctccacccct gactcccctc agccatagaa ggccccaccc cagtctcagc cctactccac 13080 tcaagcacta tagttgtagc aggagtcttc ttactcatcc gcttccaccc cctagcagaa 13140 aatagcccac taatccaaac tctaacacta tgcttaggcg ctatcaccac tctgttcgca 13200 gcagtctgcg cccttacaca aaatgacatc aaaaaaatcg tagccttctc cacttcaagt 13260 caactaggac tcatagtagt tacaatcggc atcaaccaac cacacctagc attcctgcac 13320 atctgtaccc acgccttctt caaagccata ctatttatgt gctccgggtc catcatccac 13380 aaccttaaca atgaacaaga tattcgaaaa ataggaggac tactcaaaac catacctctc 13440 acttcaacct ccctcaccat tggcagccta gcattagcag gaataccttt cctcacaggt 13500 ttctattcca aagaccacat catcgaaacc gcaaacatat catacacaaa cgcctgagcc 13560 ctatctatta ctctcatcgc tacctccctg acaagcgcct atagcactcg aataattctt 13620 ctcaccctaa caggtcaacc tcgcttccct acccttacta acattaacga aaataacccc 13680 accctactaa accccattaa acgcctggca gccggaagcc tattcgcagg atttctcatt 13740 actaacaaca tttcccccac atcccccttc caaacaacaa tccccctcta cctaaaactc 13800 acagccctcg ctgtcacttt cctaggactt ctaacagccc tagacctcaa ctacctaacc 13860 aacaaactta aaataaaatc cccactatgc acattttatt tctccaacat actcggattc 13920 taccctagca tcacacaccg cacaatcccc tatctaggcc ttcttacgag ccaaaacctg 13980 cccctactcc tcctagacct aacctgacta gaaaagctat tacctaaaac aatttcacag 14040 caccaaatct ccacctccat catcacctca acccaaaaag gcataattaa actttacttc 14100 ctctctttct tcttcccact catcctaacc ctactcctaa tcacataacc tattcccccg 14160 agcaatctca attacaatat atacaccaac aaacaatgtt caaccagtaa ctactactaa 14220 tcaacgccca taatcataca aagcccccgc accaatagga tcctcccgaa tcaaccctga 14280 cccctctcct tcataaatta ttcagcttcc tacactatta aagtttacca caaccaccac 14340 cccatcatac tctttcaccc acagcaccaa tcctacctcc atcgctaacc ccactaaaac 14400 actcaccaag acctcaaccc ctgaccccca tgcctcagga tactcctcaa tagccatcgc 14460 tgtagtatat ccaaagacaa ccatcattcc ccctaaataa attaaaaaaa ctattaaacc 14520 catataacct cccccaaaat tcagaataat aacacacccg accacaccgc taacaatcaa 14580 tactaaaccc ccataaatag gagaaggctt agaagaaaac cccacaaacc ccattactaa 14640 acccacactc aacagaaaca aagcatacat cattattctc gcacggacta caaccacgac 14700 caatgatatg aaaaaccatc gttgtatttc aactacaaga acaccaatga ccccaatacg 14760 caaaattaac cccctaataa aattaattaa ccactcattc atcgacctcc ccaccccatc 14820 caacatctcc gcatgatgaa acttcggctc actccttggc gcctgcctga tcctccaaat 14880 caccacagga ctattcctag ccatgcacta ctcaccagac gcctcaaccg ccttttcatc 14940 aatcgcccac atcactcgag acgtaaatta tggctgaatc atccgctacc ttcacgccaa 15000 tggcgcctca atattcttta tctgcctctt cctacacatc gggcgaggcc tatattacgg 15060 atcatttctc tactcagaaa cctgaaacat cggcattatc ctcctgcttg caactatagc 15120 aacagccttc ataggctatg tcctcccgtg aggccaaata tcattctgag gggccacagt 15180 aattacaaac ttactatccg ccatcccata cattggaaca gacctagttc aatgaatctg 15240 aggaggctac tcagtagaca gtcccaccct cacacgattc tttacctttc acttcatctt 15300 gcccttcatt attacagccc tagcagcact ccacctccta ttcttgcacg aaacgggatc 15360 aaacaacccc ctaggaatca cctcccattc cgataaaatc accttccacc cttactacac 15420 aatcaaagac gccctcggct tacttctctt ccttctctcc ttaataacat taacactact 15480 ctcaccagac ctcctaggcg acccagacaa ttatacccta gccaacccct taaacacccc 15540 tccccacatc aagcccgaat gatatttcct attcgcctac acaattctcc gatccgtccc 15600 taacaaacta ggaggcgtcc ttgccctatt actatccatc ctcatcctag caataatccc 15660 catcctccat atatccaaac aacaaagcat aatatttcgc ccactaagcc aatcacttta 15720 ttgactccta gccgcagacc tcctcattct aacctgaatc ggaggacaac cagtaagcta 15780 cccttttacc atcattggac aagtagcatc cgtactatac ttcacaacaa tcctaatcct 15840 aataccaact atctccctaa ttgaaaacaa aatactcaaa tgggcctgtc cttgtagtat 15900 aaactaatac accagtcttg taaaccggaa atgaaaacct ctttccaagg acaaatcaga 15960 gaaaaagtct ttaactccac cattagcacc caaagctaag attctaattt aaactattct 16020 ctgttctttc atggggaagc agatttgggt accacccaag tattgactca cccatcaaca 16080 accgctatgt atttcgtaca ttactgccag ccaccatgaa tattgtacag taccataaat 16140 acttgaccac ctgtagtaca taaaaaccca atccacatta aaaccctccc cccatgctta 16200 caagcaagta cagcaatcaa ccttcaactg tcacacatca accgcaactc caaagccacc 16260 cctcacccac taggatacca acaaacctac ccacccttaa cagtacatag cacataaagc 16320 catttaccgt acatagcaca ttacagtcaa atcccttctc gtccccatgg atgacccccc 16380 tcagataggg gtcccttgac caccatcctc cgtgaaatca atatcccgca caagagtgct 16440 actctcctcg ctccgggccc ataacacttg ggggtagcta aagtgaactg tatccgacat 16500 ctggttccta cttcagggcc ataaagccta aatagcccac acgttcccct taaataagac 16560 atcacgatg 16569 // ID KC345801; SV 1; circular; genomic DNA; STD; HUM; 16571 BP. XX AC KC345801; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT6_188 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16571 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16571 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; 1988a08e0a8e004f76774a42946a2da9. DR Ensembl-Gn; ENSG00000198840; homo_sapiens. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Tr; ENST00000361227; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16571 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT6_188" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="Buga" FT /db_xref="taxon:9606" FT /haplogroup="L0d1" FT D-loop complement(join(16026..16571,1..578)) FT tRNA 579..649 FT /product="tRNA-Phe" FT rRNA 650..1603 FT /product="12S ribosomal RNA" FT tRNA 1604..1672 FT /product="tRNA-Val" FT rRNA 1673..3231 FT /product="16S ribosomal RNA" FT tRNA 3232..3306 FT /product="tRNA-Leu" FT gene 3309..4264 FT /gene="ND1" FT CDS 3309..4264 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4263..4264,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q4GRH9" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:Q4GRH9" FT /protein_id="AGD82368.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPTTISSIPPQT" FT tRNA 4265..4333 FT /product="tRNA-Ile" FT tRNA complement(4331..4402) FT /product="tRNA-Gln" FT tRNA 4404..4471 FT /product="tRNA-Met" FT gene 4472..5513 FT /gene="ND2" FT CDS 4472..5513 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5513,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82369.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5514..5578 FT /product="tRNA-Trp" FT tRNA complement(5589..5657) FT /product="tRNA-Ala" FT tRNA complement(5659..5731) FT /product="tRNA-Asn" FT tRNA complement(5763..5828) FT /product="tRNA-Cys" FT tRNA complement(5828..5893) FT /product="tRNA-Tyr" FT gene 5906..7447 FT /gene="COX1" FT CDS 5906..7447 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B1J9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B1J9" FT /protein_id="AGD82370.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7447..7518) FT /product="tRNA-Ser" FT tRNA 7520..7587 FT /product="tRNA-Asp" FT gene 7588..8271 FT /gene="COX2" FT CDS 7588..8271 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /db_xref="GOA:Q9B1F9" FT /db_xref="InterPro:IPR001505" FT /db_xref="InterPro:IPR002429" FT /db_xref="InterPro:IPR008972" FT /db_xref="InterPro:IPR011759" FT /db_xref="InterPro:IPR014222" FT /db_xref="InterPro:IPR034210" FT /db_xref="InterPro:IPR036257" FT /db_xref="UniProtKB/TrEMBL:Q9B1F9" FT /protein_id="AGD82371.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIETPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8297..8366 FT /product="tRNA-Lys" FT gene 8368..8574 FT /gene="ATP8" FT CDS 8368..8574 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82372.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8529..9209 FT /gene="ATP6" FT CDS 8529..9209 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B185" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B185" FT /protein_id="AGD82373.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9209..9992 FT /gene="COX3" FT CDS 9209..9992 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9992,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82374.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9993..10060 FT /product="tRNA-Gly" FT gene 10061..10406 FT /gene="ND3" FT CDS 10061..10406 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10406,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXZ5" FT /db_xref="InterPro:IPR000440" FT /db_xref="InterPro:IPR038430" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ5" FT /protein_id="AGD82375.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWTE" FT tRNA 10407..10471 FT /product="tRNA-Arg" FT gene 10472..10768 FT /gene="ND4L" FT CDS 10472..10768 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:E2FR42" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:E2FR42" FT /protein_id="AGD82376.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVAISNTYGLDYVHNLNLLQC" FT gene 10762..12139 FT /gene="ND4" FT CDS 10762..12139 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12139,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82377.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12140..12208 FT /product="tRNA-His" FT tRNA 12209..12267 FT /product="tRNA-Ser" FT tRNA 12268..12338 FT /product="tRNA-Leu" FT gene 12339..14150 FT /gene="ND5" FT CDS 12339..14150 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q4F0F4" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q4F0F4" FT /protein_id="AGD82378.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPTSPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14151..14675) FT /gene="ND6" FT CDS complement(14151..14675) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82379.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14676..14744) FT /product="tRNA-Glu" FT gene 14749..15889 FT /gene="CYTB" FT CDS 14749..15889 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15889,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q15H14" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q15H14" FT /protein_id="AGD82380.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIITALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLLSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15890..15955 FT /product="tRNA-Thr" FT tRNA complement(15957..16025) FT /product="tRNA-Pro" XX SQ Sequence 16571 BP; 5132 A; 5187 C; 2164 G; 4088 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcggac atacctacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tattttcccc tcccactccc atactactaa 480 tctcatcaat acaaccccgc ccatcctacc cagcacacac acaccgctgc taaccccata 540 ccccgaacca accaaacccc aaagacaccc cccccacagt ttatgtagct tacctcctca 600 aagcaataca ctgaaaatgt ttagacgggc tcacatcacc ccataaacaa ataggtttgg 660 tcctagcctt tctattagct cttagtaaga ttacacatgc aagcatcccc gttccagtga 720 attcaccctc taaatcacca cgatcaaaag ggacaagcat caagcacgca acaatgcagc 780 tcaaaacgct tagcctagcc acacccccac gggaaacagc agtgataaac ctttagcaat 840 aaacgaaagt ttaactaagc tatactaacc ccagggttgg tcaatttcgt gccagccacc 900 gcggtcacac gattaaccca agtcaataga agccggcgta aagagtgttt tagatcaccc 960 cctccccaat aaagctaaaa ctcacctgag ttgtaaaaaa ctccagttga cacaaaataa 1020 actacgaaag tggctttaac atatctgaat acacaatagc taagacccaa actgggatta 1080 gataccccac tatgcttagc cctaaacctc aacagttaaa tcaacaaaac tgctcgccag 1140 aacactacga gccacagctt aaaactcaaa ggacctggcg gtgcttcata tccctctaga 1200 ggagcctgtt ctgtaatcga taaaccccga tcaacctcac cacctcttgc tcagcctata 1260 taccgccatc ttcagcaaac cctgatgaag gctacaaagt aagcgcaagt acccacgtaa 1320 agacgttagg tcaaggtgta gcccatgagg tggcaagaaa tgggctacat tttctacccc 1380 agaaaactac gatagccctt atgaaactta agggtcgaag gtggatttag cagtaaacta 1440 agagtagagt gcttagttga acagggccct gaagcgcgta cacaccgccc gtcaccctcc 1500 tcaagtatac ttcaaaggac atttaactaa aacccctacg catttatata gaggagacaa 1560 gtcgtaacat ggtaagtgta ctggaaagtg cacttggacg aaccagagtg tagcttaaca 1620 caaagcaccc aacttacact taggagattt caacttaact tgaccgctct gagctaaacc 1680 tagccccaaa cccactccac cttactacca gacaacctta gccaaaccat ttacccaaat 1740 aaagtatagg cgatagaaat tgaaacctgg cgcaatagat atagtaccgc aagggaaaga 1800 tgaaaaatta taaccaagca taatatagca aggactaacc cctatacctt ctgcataatg 1860 aattaactag aaataacttt gcaaggagag ccaaagctaa gacccccgaa accagacgag 1920 ctacctaaga acagctaaaa gagcacaccc gtctatgtag caaaatagtg ggaagattta 1980 taggtagagg cgacaaacct accgagcctg gtgatagctg gttgtccaag atagaatctt 2040 agttcaactt taaatttgcc cacagaaccc tctaaatccc cttgtaaatt taactgttag 2100 tccaaagagg aacagctctt tggacactag gaaaaaacct tgtagagaga gtaaaaaatt 2160 taacacccat agtaggccta aaagcagcca ccaattaaga aagcgttcaa gctcaacacc 2220 cactacctaa aaaatcccaa acatataact gaactcctca cacccaattg gaccaatcta 2280 tcaccctata gaagaactaa tgttagtata agtaacatga aaacattctc ctccgcataa 2340 gcctgcgtca gattaaaaca ctgaactgac aattaacagc ccaatatcta caatcaacca 2400 acaagtcatt attaccctca ctgtcaaccc aacacaggca tgctcataag gaaaggttaa 2460 aaaaagtaaa aggaactcgg caaatcctta ccccgcctgt ttaccaaaaa catcacctct 2520 agcatcacca gtattagagg caccgcctgc ccagtgacac atgtttaacg gccgcggtac 2580 cctaaccgtg caaaggtagc ataatcactt gttccttaaa tagggacctg tatgaatggc 2640 tccacgaggg ttcagctgtc tcttactttt aaccagtgaa attgacctgc ccgtgaagag 2700 gcgggcataa cacagcaaga cgagaagacc ctatggagct ttaatttatt aatgcaaaca 2760 atacctaaca aacccacagg tcctaaacta ccaaacctgc attaaaaatt tcggttgggg 2820 cgacctcgga gcagaaccca acctccgagc agtacatgct aagacttcac cagtcaaagc 2880 gaactaccat actcaattga tccaataact tgaccaacgg aacaagttac cctagggata 2940 acagcgcaat cctattctag agtccatatc aacaataggg tttacgacct cgatgttgga 3000 tcaggacatc ccgatggtgc agccgctatt aaaggttcgt ttgttcaacg attaaagtcc 3060 tacgtgatct gagttcagac cggagtaatc caggtcggtt tctatctact tcaaattcct 3120 ccctgtacga aaggacaaga gaaataaggc ctacttcaca aagcgccttc ccccgtaaat 3180 gatatcatct caacttagta ttatacccac acccacccaa gaacagggtt tgttaagatg 3240 gcagagcccg gtaatcgcat aaaacttaaa actttacagt cagaggttca attcctcttc 3300 ttaacaacat acccatggcc aacctcctac tcctcattgt acccattcta atcgcaatgg 3360 cattcctaat gcttaccgaa cgaaaaattc taggctatat acaactacgc aaaggcccca 3420 acgttgtagg cccctacgga ctactacaac ccttcgctga cgccataaaa ctcttcacca 3480 aagagcccct aaaacccgcc acatctacca tcaccctata catcaccgcc ccaaccttag 3540 ctctcaccat cgctcttcta ctatgaaccc ccctccccat acccaacccc ctggttaacc 3600 tcaacctagg cctcctattc attctagcca cctctagcct agccgtttac tcaatcctct 3660 gatcagggtg agcatcaaac tcaaactacg ccctgatcgg cgcactgcga gcagtagccc 3720 aaacaatctc atatgaagtc accctagcca tcattctgct atcaacatta ctaataagtg 3780 gctcctttaa cctctccacc cttatcacaa cacaagaaca cctctgatta ctcctgccat 3840 catgaccctt ggccataata tgatttatct ccacactagc agagaccaac cgaaccccct 3900 tcgaccttgc cgaaggggag tccgaactag tctcaggctt caacatcgaa tacgccgcag 3960 gccccttcgc cctattcttc atagccgaat acacaaacat tattataata aacaccctca 4020 ccactacaat cttcctagga acaacatatg acgcactctc ccctgaactc tacacaacat 4080 attttgtcac caagacccta cttctgacct ccctgttctt atgaattcga acagcatacc 4140 cccgattccg ctacgaccaa ctcatacacc tcctatgaaa aaacttccta ccactcaccc 4200 tagcattact tatatgatat gtctccatac ccactacaat ctccagcatt ccccctcaaa 4260 cctaagaaat atgtctgata aaagagttac tttgatagag taaataatag gagtttaaac 4320 ccccttattt ctaggactat gagaatcgaa cccatccctg agaatccaaa attctccgtg 4380 ccacctatca caccccatcc taaagtaagg tcagctaaat aagctatcgg gcccataccc 4440 cgaaaatgtt ggttataccc ttcccgtact aattaatccc ctggcccaac ccgtcatcta 4500 ctctaccatc tttgcaggca cactcatcac agcgctaagc tcgcactgat tttttacctg 4560 agtcggccta gaaataaaca tgctagcttt tattccagtt ctaaccaaaa aaataaaccc 4620 tcgttccaca gaagctgcca tcaagtattt cctcacgcaa gcaaccgcat ccataatcct 4680 tctaatagct atcctcttca acaatatact ctccggacaa tgaaccataa ccaatactac 4740 caatcaatac tcatcattaa taatcataat ggctatagca ataaaactag gaatagcccc 4800 ctttcacttc tgagtcccag aggttaccca aggcacccct ctgacatccg gcctgcttct 4860 tctcacatga caaaaactag cccccatctc aatcatatac caaatctctc cctcactaaa 4920 cgtaagcctt ctcctcactc tctcaatctt atccatcata gcaggcagtt gaggtggatt 4980 aaaccaaacc cagctacgca aaatcttagc atactcctca attacccaca taggatgaat 5040 aatagcagtt ctaccgtaca accctaacat aaccattctt aatttaacta tttatattat 5100 cctaactact accgcattcc tactactcaa cttaaactcc agcaccacga ccctactact 5160 atctcgcacc tgaaacaagc taacatgact aacaccctta attccatcca ccctcctctc 5220 cctaggaggc ctgcccccgc taaccggctt tttgcccaaa tgggccatta tcgaagaatt 5280 cacaaaaaac aatagcctca tcatccccac catcatagcc accatcaccc tccttaacct 5340 ctacttctac ctacgcctaa tctactccac ctcaatcaca ctactcccca tatctaacaa 5400 cgtaaaaata aaatgacagt ttgaacatac aaaacccacc ccactcctcc ccacactcat 5460 cgcccttacc acgctactcc tacctatctc cccttttata ctaataatct tatagaaatt 5520 taggttaaat acagaccaag agccttcaaa gccctcagta agttgcaata cttaatttct 5580 gtaacagcta aggactgcaa aaccccactc tgcatcaact gaacgcaaat cagccacttt 5640 aattaagcta agcccttact agaccaatgg gacttaaacc cacaaacact tagttaacag 5700 ctaagcaccc taatcaactg gcttcaatct acttctcccg ccgccgggaa aaaaggcggg 5760 agaagccccg gcaggtttga agctgcttct tcgaatttgc aattcaatat gaaaatcacc 5820 tcggagctgg taaaaagagg cctaacccct gtctttagat ttacagtcca atgcttcact 5880 cagccatttt acctcacccc cactgatgtt cgccgaccgt tgactattct ctacaaacca 5940 caaagacatt ggaacactat acctattatt cggcgcatga gctggagtcc taggcacagc 6000 tctaagcctc cttattcgag ccgagctggg ccagccaggc aaccttctag gtaacgacca 6060 catctacaac gttatcgtca cagcccatgc atttgtaata atcttcttca tagtaatacc 6120 catcataatc ggaggctttg gcaactgact agttccccta ataatcggtg cccccgatat 6180 ggcgttcccc cgcataaaca acataagctt ctgactctta cctccctctc tcctactcct 6240 gctcgcatct gctatagtgg aggccggggc aggaacaggt tgaacagtct accctccctt 6300 agcagggaac tactcccacc ctggagcctc cgtagaccta accatcttct ccttacacct 6360 agcaggtgtc tcctctatct taggggccat caatttcatc acaacaatta tcaatataaa 6420 accccctgcc ataacccaat accaaacgcc cctcttcgtc tgatccgtcc taatcacagc 6480 agtcctactt ctcctatctc tcccagtcct agctgctggc atcactatac tactaacaga 6540 ccgcaacctc aacaccacct tcttcgaccc cgccggagga ggagacccca ttctatacca 6600 acacctattc tgatttttcg gtcaccctga agtttatatt cttatcctac caggcttcgg 6660 aataatctcc catattgtaa cttactactc cggaaaaaaa gaaccatttg gatacatagg 6720 tatggtctga gctatgatat caattggctt cctagggttt atcgtgtgag cacaccatat 6780 atttacagta ggaatagacg tagacacacg agcatacttc acctccgcta ccataatcat 6840 cgctatcccc accggcgtca aagtatttag ctgactcgcc acactccacg gaagcaatat 6900 gaaatgatct gctgcagtgc tctgagccct aggattcatc tttcttttca ccgtaggtgg 6960 cctgactggc attgtattag caaactcatc actagacatc gtactacacg acacgtacta 7020 cgttgtagct cacttccact atgtcctatc aataggagct gtatttgcca tcataggagg 7080 cttcattcac tgatttcccc tattctcagg ctacacccta gaccaaacct acgccaaaat 7140 ccatttcgct atcatattca tcggcgtaaa tctaactttc ttcccacaac actttctcgg 7200 cctatccgga atgccccgac gttactcgga ctaccccgat gcatacacca catgaaatat 7260 cctatcatct gtaggctcat tcatttctct aacagcagta atattaataa ttttcatgat 7320 ttgagaagcc ttcgcttcga agcgaaaagt cctaatagta gaagaaccct ccataaacct 7380 ggagtgacta tatggatgcc ccccacccta ccacacattc gaagaacccg tatacataaa 7440 atctagacaa aaaaggaagg aatcgaaccc cccaaagctg gtttcaagcc aaccccatgg 7500 cctccatgac tttttcaaaa agatattaga aaaaccattt cataactttg tcaaagttaa 7560 attataggct aaatcctata tatcttaatg gcacatgcag cgcaagtagg tctacaagac 7620 gctacttccc ctatcataga agagcttatc acctttcatg atcacgccct cataatcatt 7680 ttccttatct gcttcctagt cctgtatgcc cttttcctaa cactcacaac aaaactaact 7740 aatactaaca tctcagacgc tcaggaaata gaaaccgtct gaactatcct gcccgccatc 7800 atcctagtcc tcatcgccct cccatcccta cgcatccttt acataacaga cgaggtcaac 7860 gatccctccc ttaccatcaa atcaattggc caccaatggt actgaaccta cgagtacacc 7920 gactacggcg gactaatctt caactcctac atacttcccc cattattcct agaaccaggc 7980 gacctgcgac tccttgacgt tgacaatcga gtagtactcc cgattgaaac ccccattcgt 8040 ataataatta catcacaaga cgtcttgcac tcatgagctg tccccacatt aggcttaaaa 8100 acagatgcaa ttccaggacg tctaaaccaa accactttca ccgctacacg accaggggta 8160 tactacggtc aatgctctga aatctgtgga gcaaaccaca gtttcatgcc catcgtccta 8220 gaattaattc ccctaaaaat ctttgaaata ggacccgtat ttaccctata gcaccccctc 8280 taccccctct agagcccact gtaaagctaa cttagcatta accttttaag ttaaagatta 8340 agagaaccaa cacctcttta cagtgaaatg ccccaactaa atactaccgt atggcccacc 8400 ataattaccc ccatactcct tacactattc ctcatcaccc aactaaaaat attaaacaca 8460 aactaccact tacctccctc accaaagccc ataaaaataa aaaattataa caaaccctga 8520 gaaccaaaat gaacgaaaat ctgttcgctt cattcattgc ccccacaatc ctaggcctac 8580 ccgccgcagt actgatcatt ctatttcccc ctctattgat ccccacctcc aaatatctca 8640 tcaacaaccg actaattacc acccaacaat gactaatcaa actaacctca aaacaaatga 8700 tagccataca caacactaaa ggacgaacct gatctcttat actagtatcc ttaatcattt 8760 ttattgccac aactaacctc ctcggactcc tgcctcactc atttacacca accacccaac 8820 tatctataaa cctagccatg gccatcccct tatgagcggg cgcagtgatt ataggctttc 8880 gctctaagat taaaaatgcc ctagcccact tcttaccaca aggcacacct acacccctta 8940 tccccatact agttattatc gaaaccatca gcctactcat tcaaccaata gccctggccg 9000 tacgcctaac cgctaacatt actgcaggcc acctactcat gcatctaatt ggaagcgcca 9060 ccctagcaat atcaaccatt aaccttccct ctacacttat catcttcaca attctaattc 9120 tactgactat cctagaaatc gctgtcgcct taatccaagc ctacgttttc acacttctag 9180 taagcctcta cctgcacgac aacacataat gacccaccaa tcacatgcct atcatatagt 9240 aaaacccagc ccatgacccc taacaggggc cctctcagcc ctcctaatga cctccggcct 9300 agccatgtga tttcacttcc actccataac gctcctcata ctaggcctgc taaccaacac 9360 actaaccata taccaatgat ggcgcgatgt aacacgagaa agcacatacc aaggccacca 9420 cacaccacct gtccaaaaag gccttcgata cgggataatc ctatttatta cctcagaagt 9480 ttttttcttc gcaggatttt tctgagcctt ttaccactcc agcctagccc ctacccccca 9540 actaggaggg cactggcccc caacaggcat caccccgcta aatcccctag aagtcccact 9600 cctaaacaca tccgtattac tcgcatcagg agtatcaatc acctgagctc accatagtct 9660 aatagaaaac aaccgaaacc aaataattca agcactgctt attacaattt tactgggtct 9720 ctattttacc ctcctacaag cctcagagta cttcgaatct cccttcacca tttccgacgg 9780 catctacggc tcaacatttt ttgtagccac aggcttccac ggacttcacg tcattattgg 9840 ctcaactttc ctcactatct gcttcatccg ccaactaata tttcacttta catccaaaca 9900 tcactttggc ttcgaagccg ccgcctgata ctggcatttt gtagatgtgg tttgactatt 9960 tctgtatgtc tccatctatt gatgagggtc ttactctttt agtataaata gtaccgttaa 10020 cttccaatta actagttttg acaacattca aaaaagagta ataaacttcg ccttaatttt 10080 aataatcaac accctcctag ccttactact aataattatt acattttgac taccacaact 10140 caacggctac atagaaaaat ccacccctta cgagtgcggc ttcgacccta tatcccccgc 10200 ccgcgtccct ttctccataa aattcttctt agtagctatt accttcttat tatttgatct 10260 agaaattgcc ctccttttac ccctaccatg agccctacaa acaactaacc tgccactaat 10320 agttatgtca tccctcttat taatcatcat cctagcccta agtctggcct atgagtgact 10380 acaaaaagga ttagactgaa ccgaattggt atatagttta aacaaaacga atgatttcga 10440 ctcattaaat tatgataatc atatttacca aatgcccctc atttacataa atattatact 10500 agcatttacc atctcacttc taggaatact agtatatcgc tcacacctca tatcctccct 10560 actatgccta gaaggaataa tactatcgct attcattata gctactctca taaccctcaa 10620 cacccactcc ctcttagcca atattgtgcc tattgccata ctagtttttg ccgcctgcga 10680 agcagcggta ggcctagccc tactagtcgc aatctccaac acatatggcc tagactacgt 10740 acataaccta aacctactcc aatgctaaaa ctaatcgtcc caacaattat attactacca 10800 ctgacatgac tctccaaaaa acacataatt tgaatcaaca caaccaccca cagcctaatt 10860 attagcatca tccccctact attttttaac caaatcaaca acaacctatt tagctgctcc 10920 ccaacctttt cctccgaccc cctaacaacc cccctcctaa tactaactac ctgactccta 10980 cccctcacaa tcatggcaag ccaacgccac ttatccagtg aaccactatc acgaaaaaaa 11040 ctctacctct ctatactaat ctccctacaa atctccttaa ttataacatt cacagccaca 11100 gaactaatca tattttatat cttcttcgaa accacactta tccccacctt ggctatcatc 11160 acccgatgag gcaaccagcc agaacgcctg aacgcaggca catacttcct attctacacc 11220 ctagtaggct cccttcccct actcatcgca ctaatttaca ctcacaacac cctaggctca 11280 ctaaacattc tactactcac tctcactgcc caagaactat caaactcctg agccaacaac 11340 ttaatatgac tagcttacac aatagctttt atagtaaaga tacctcttta cggactccac 11400 ttatgactcc ctaaagccca tgtcgaagcc cccatcgctg ggtcaatagt acttgccgca 11460 gtactcttaa aactaggcgg ctatggtata atacgcctca cactcattct caaccccctg 11520 acaaaacaca tagcctaccc cttccttgta ctatccctat gaggcataat tataacaagc 11580 tccatctgcc tacgacaaac agacctaaaa tcgctcattg catactcttc aatcagccac 11640 atagccctcg tagtaacagc cattctcatc caaaccccct gaagcttcac cggcgcagtc 11700 attctcataa tcgcccacgg acttacatcc tcattactat tctgcctagc aaactcaaac 11760 tacgaacgca ctcacagtcg catcataatc ctctctcaag gacttcaaac tctactccca 11820 ctaatagctt tttgatgact tctagcaagc ctcgctaacc tcgccttacc ccccactatt 11880 aacctactgg gagaactctc tgtgctagta accacattct cctgatcaaa tatcactctc 11940 ctacttacag gactcaacat actagtcaca gccctatact ccctctacat atttaccaca 12000 acacaatgag gctcactcac ccaccacatt aacaacataa aaccctcatt cacacgagaa 12060 aacaccctca tgttcataca cctatccccc attctcctcc tatccctcaa ccccgacatc 12120 atcaccgggt tttcctcttg taaatatagt ttaaccaaaa catcagattg tgaatctgac 12180 aacagaggct tacgacccct tatttaccga gaaagctcac aagaactgct aactcatgcc 12240 cccatgtcta acaacatggc tttctcaact tttaaaggat aacagctatc cattggtctt 12300 aggccccaaa aattttggtg caactccaaa taaaagtaat aaccatgcac actactataa 12360 ccaccctaac cctgacttcc ctaattcccc ccatccttac caccctcgtt aaccctaaca 12420 aaaaaaactc atacccccat tatgtaaaat ccattgtcgc atccaccttt attatcagtc 12480 tcttccccac aacaatattc atgtgcctag accaagaagt tattatctcg aactgacact 12540 gagccacaac ccaaacaacc cagctctccc taagcttcaa actagactac ttctccataa 12600 tattcatccc tgtagcattg ttcgttacat ggtccatcat agaattctca ctgtgatata 12660 taaactcaga cccaaacatt aatcagttct tcaaatatct actcattttc ctaattacca 12720 tgctaatctt agttaccgct aacaacctat tccaactgtt catcggctga gagggcgtag 12780 gaattatatc cttcttgctc atcagttgat gatacgcccg agcagatgcc aacacagcag 12840 ccattcaagc aatcctatac aaccgtatcg gcgatatcgg tttcatcctc gccttagcat 12900 gatttatcct acactccaac tcatgagacc cacaacaaat agcccttcta aacgctaatc 12960 caagcctcac cccactacta ggcctcctcc tagcagcagc aggcaaatca gcccaattag 13020 gtctccaccc ctgactcccc tcagccatag aaggccccac cccagtctca gccctactcc 13080 actcaagcac tatagttgta gcaggagtct tcttactcat ccgcttccac cccctagcag 13140 aaaatagccc actaatccaa actctaacac tatgcttagg cgctatcacc actctgttcg 13200 cagcagtctg cgcccttaca caaaatgaca tcaaaaaaat cgtagccttc tccacttcaa 13260 gtcaactagg actcatagta gttacaatcg gcatcaacca accacaccta gcattcctgc 13320 acatctgtac ccacgccttc ttcaaagcca tactatttat gtgctccggg tccatcatcc 13380 acaaccttaa caatgaacaa gatattcgaa aaataggagg actactcaaa accatacctc 13440 tcacttcaac ctccctcacc attggcagcc tagcattagc aggaatacct ttcctcacag 13500 gtttctattc caaagaccac atcatcgaaa ccgcaaacat atcatacaca aacgcctgag 13560 ccctatctat tactctcatc gctacctccc tgacaagcgc ctatagcact cgaataattc 13620 ttctcaccct aacaggtcaa cctcgcttcc ctacccttac taacattaac gaaaataacc 13680 ccaccctact aaaccccatt aaacgcctgg cagccggaag cctattcgca ggatttctca 13740 ttactaacaa catttccccc acatccccct tccaaacaac aatccccctc tacctaaaac 13800 tcacagccct cgctgtcact ttcctaggac ttctaacagc cctagacctc aactacctaa 13860 ccaacaaact taaaataaaa tccccactat gcacatttta tttctccaac atactcggat 13920 tctaccctag catcacacac cgcacaatcc cctatctagg ccttcttacg agccaaaacc 13980 tgcccctact cctcctagac ctaacctgac tagaaaagct attacctaaa acaatttcac 14040 agcaccaaat ctccacctcc atcatcacct caacccaaaa aggcataatt aaactttact 14100 tcctctcttt cttcttccca ctcatcctaa ccctactcct aatcacataa cctattcccc 14160 cgagcaatct caattacaat atatacacca acaaacaatg ttcaaccagt aactactact 14220 aatcaacgcc cataatcata caaagccccc gcaccaatag gatcctcccg aatcaaccct 14280 gacccctctc cttcataaat tattcagctt cctacactat taaagtttac cacaaccacc 14340 accccatcat actctttcac ccacagcacc aatcctacct ccatcgctaa ccccactaaa 14400 acactcacca agacctcaac ccctgacccc catgcctcag gatactcctc aatagccatc 14460 gctgtagtat atccaaagac aaccatcatt ccccctaaat aaattaaaaa aactattaaa 14520 cccatataac ctcccccaaa attcagaata ataacacacc cgaccacacc gctaacaatc 14580 aatactaaac ccccataaat aggagaaggc ttagaagaaa accccacaaa ccccattact 14640 aaacccacac tcaacagaaa caaagcatac atcattattc tcgcacggac tacaaccacg 14700 accaatgata tgaaaaacca tcgttgtatt tcaactacaa gaacaccaat gaccccaata 14760 cgcaaaatta accccctaat aaaattaatt aaccactcat tcatcgacct ccccacccca 14820 tccaacatct ccgcatgatg aaacttcggc tcactccttg gcgcctgcct gatcctccaa 14880 atcaccacag gactattcct agccatgcac tactcaccag acgcctcaac cgccttttca 14940 tcaatcgccc acatcactcg agacgtaaat tatggctgaa tcatccgcta ccttcacgcc 15000 aatggcgcct caatattctt tatctgcctc ttcctacaca tcgggcgagg cctatattac 15060 ggatcatttc tctactcaga aacctgaaac atcggcatta tcctcctgct tgcaactata 15120 gcaacagcct tcataggcta tgtcctcccg tgaggccaaa tatcattctg aggggccaca 15180 gtaattacaa acttactatc cgccatccca tacattggaa cagacctagt tcaatgaatc 15240 tgaggaggct actcagtaga cagtcccacc ctcacacgat tctttacctt tcacttcatc 15300 ttgcccttca ttattacagc cctagcagca ctccacctcc tattcttgca cgaaacggga 15360 tcaaacaacc ccctaggaat cacctcccat tccgataaaa tcaccttcca cccttactac 15420 acaatcaaag acgccctcgg cttacttctc ttccttctct ccttaataac attaacacta 15480 ctctcaccag acctcctagg cgacccagac aattataccc tagccaaccc cttaaacacc 15540 cctccccaca tcaagcccga atgatatttc ctattcgcct acacaattct ccgatccgtc 15600 cctaacaaac taggaggcgt ccttgcccta ttactatcca tcctcatcct agcaataatc 15660 cccatcctcc atatatccaa acaacaaagc ataatatttc gcccactaag ccaatcactt 15720 tattgactcc tagccgcaga cctcctcatt ctaacctgaa tcggaggaca accagtaagc 15780 taccctttta ccatcattgg acaagtagca tccgtactat acttcacaac aatcctaatc 15840 ctaataccaa ctatctccct aattgaaaac aaaatactca aatgggcctg tccttgtagt 15900 ataaactaat acaccagtct tgtaaaccgg aaatgaaaac ctctttccaa ggacaaatca 15960 gagaaaaagt ctttaactcc accattagca cccaaagcta agattctaat ttaaactatt 16020 ctctgttctt tcatggggaa gcagatttgg gtaccaccca agtattgact cacccatcaa 16080 caaccgctat gtatttcgta cattactgcc agccaccatg aatattgtac agtaccataa 16140 atacttgacc acctgtagta cataaaaacc caatccacat taaaaccctc cccccatgct 16200 tacaagcaag tacagcaatc aaccttcaac tgtcacacat caaccgcaac tccaaagcca 16260 cccctcaccc actaggatac caacaaacct acccaccctt aacagtacat agcacataaa 16320 gccatttacc gtacatagca cattacagtc aaatcccttc tcgtccccat ggatgacccc 16380 cctcagatag gggtcccttg gccaccatcc tccgtgaaat caatatcccg cacaagagtg 16440 ctactctcct cgctccgggc ccataacact tgggggtagc taaagtgaac tgtatccgac 16500 atctggttcc tacttcaggg ccataaagcc taaatagccc acacgttccc cttaaataag 16560 acatcacgat g 16571 // ID KC345802; SV 1; circular; genomic DNA; STD; HUM; 16571 BP. XX AC KC345802; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT6_191 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16571 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16571 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; 1988a08e0a8e004f76774a42946a2da9. DR Ensembl-Gn; ENSG00000198840; homo_sapiens. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Tr; ENST00000361227; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16571 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT6_191" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="Buga" FT /db_xref="taxon:9606" FT /haplogroup="L0d1" FT D-loop complement(join(16026..16571,1..578)) FT tRNA 579..649 FT /product="tRNA-Phe" FT rRNA 650..1603 FT /product="12S ribosomal RNA" FT tRNA 1604..1672 FT /product="tRNA-Val" FT rRNA 1673..3231 FT /product="16S ribosomal RNA" FT tRNA 3232..3306 FT /product="tRNA-Leu" FT gene 3309..4264 FT /gene="ND1" FT CDS 3309..4264 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4263..4264,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q4GRH9" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:Q4GRH9" FT /protein_id="AGD82381.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPTTISSIPPQT" FT tRNA 4265..4333 FT /product="tRNA-Ile" FT tRNA complement(4331..4402) FT /product="tRNA-Gln" FT tRNA 4404..4471 FT /product="tRNA-Met" FT gene 4472..5513 FT /gene="ND2" FT CDS 4472..5513 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5513,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82382.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5514..5578 FT /product="tRNA-Trp" FT tRNA complement(5589..5657) FT /product="tRNA-Ala" FT tRNA complement(5659..5731) FT /product="tRNA-Asn" FT tRNA complement(5763..5828) FT /product="tRNA-Cys" FT tRNA complement(5828..5893) FT /product="tRNA-Tyr" FT gene 5906..7447 FT /gene="COX1" FT CDS 5906..7447 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B1J9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B1J9" FT /protein_id="AGD82383.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7447..7518) FT /product="tRNA-Ser" FT tRNA 7520..7587 FT /product="tRNA-Asp" FT gene 7588..8271 FT /gene="COX2" FT CDS 7588..8271 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /db_xref="GOA:Q9B1F9" FT /db_xref="InterPro:IPR001505" FT /db_xref="InterPro:IPR002429" FT /db_xref="InterPro:IPR008972" FT /db_xref="InterPro:IPR011759" FT /db_xref="InterPro:IPR014222" FT /db_xref="InterPro:IPR034210" FT /db_xref="InterPro:IPR036257" FT /db_xref="UniProtKB/TrEMBL:Q9B1F9" FT /protein_id="AGD82384.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIETPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8297..8366 FT /product="tRNA-Lys" FT gene 8368..8574 FT /gene="ATP8" FT CDS 8368..8574 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82385.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8529..9209 FT /gene="ATP6" FT CDS 8529..9209 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B185" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B185" FT /protein_id="AGD82386.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9209..9992 FT /gene="COX3" FT CDS 9209..9992 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9992,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82387.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9993..10060 FT /product="tRNA-Gly" FT gene 10061..10406 FT /gene="ND3" FT CDS 10061..10406 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10406,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXZ5" FT /db_xref="InterPro:IPR000440" FT /db_xref="InterPro:IPR038430" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ5" FT /protein_id="AGD82388.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWTE" FT tRNA 10407..10471 FT /product="tRNA-Arg" FT gene 10472..10768 FT /gene="ND4L" FT CDS 10472..10768 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:E2FR42" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:E2FR42" FT /protein_id="AGD82389.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVAISNTYGLDYVHNLNLLQC" FT gene 10762..12139 FT /gene="ND4" FT CDS 10762..12139 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12139,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82390.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12140..12208 FT /product="tRNA-His" FT tRNA 12209..12267 FT /product="tRNA-Ser" FT tRNA 12268..12338 FT /product="tRNA-Leu" FT gene 12339..14150 FT /gene="ND5" FT CDS 12339..14150 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q4F0F4" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q4F0F4" FT /protein_id="AGD82391.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPTSPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14151..14675) FT /gene="ND6" FT CDS complement(14151..14675) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82392.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14676..14744) FT /product="tRNA-Glu" FT gene 14749..15889 FT /gene="CYTB" FT CDS 14749..15889 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15889,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q15H14" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q15H14" FT /protein_id="AGD82393.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIITALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLLSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15890..15955 FT /product="tRNA-Thr" FT tRNA complement(15957..16025) FT /product="tRNA-Pro" XX SQ Sequence 16571 BP; 5132 A; 5187 C; 2164 G; 4088 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcggac atacctacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tattttcccc tcccactccc atactactaa 480 tctcatcaat acaaccccgc ccatcctacc cagcacacac acaccgctgc taaccccata 540 ccccgaacca accaaacccc aaagacaccc cccccacagt ttatgtagct tacctcctca 600 aagcaataca ctgaaaatgt ttagacgggc tcacatcacc ccataaacaa ataggtttgg 660 tcctagcctt tctattagct cttagtaaga ttacacatgc aagcatcccc gttccagtga 720 attcaccctc taaatcacca cgatcaaaag ggacaagcat caagcacgca acaatgcagc 780 tcaaaacgct tagcctagcc acacccccac gggaaacagc agtgataaac ctttagcaat 840 aaacgaaagt ttaactaagc tatactaacc ccagggttgg tcaatttcgt gccagccacc 900 gcggtcacac gattaaccca agtcaataga agccggcgta aagagtgttt tagatcaccc 960 cctccccaat aaagctaaaa ctcacctgag ttgtaaaaaa ctccagttga cacaaaataa 1020 actacgaaag tggctttaac atatctgaat acacaatagc taagacccaa actgggatta 1080 gataccccac tatgcttagc cctaaacctc aacagttaaa tcaacaaaac tgctcgccag 1140 aacactacga gccacagctt aaaactcaaa ggacctggcg gtgcttcata tccctctaga 1200 ggagcctgtt ctgtaatcga taaaccccga tcaacctcac cacctcttgc tcagcctata 1260 taccgccatc ttcagcaaac cctgatgaag gctacaaagt aagcgcaagt acccacgtaa 1320 agacgttagg tcaaggtgta gcccatgagg tggcaagaaa tgggctacat tttctacccc 1380 agaaaactac gatagccctt atgaaactta agggtcgaag gtggatttag cagtaaacta 1440 agagtagagt gcttagttga acagggccct gaagcgcgta cacaccgccc gtcaccctcc 1500 tcaagtatac ttcaaaggac atttaactaa aacccctacg catttatata gaggagacaa 1560 gtcgtaacat ggtaagtgta ctggaaagtg cacttggacg aaccagagtg tagcttaaca 1620 caaagcaccc aacttacact taggagattt caacttaact tgaccgctct gagctaaacc 1680 tagccccaaa cccactccac cttactacca gacaacctta gccaaaccat ttacccaaat 1740 aaagtatagg cgatagaaat tgaaacctgg cgcaatagat atagtaccgc aagggaaaga 1800 tgaaaaatta taaccaagca taatatagca aggactaacc cctatacctt ctgcataatg 1860 aattaactag aaataacttt gcaaggagag ccaaagctaa gacccccgaa accagacgag 1920 ctacctaaga acagctaaaa gagcacaccc gtctatgtag caaaatagtg ggaagattta 1980 taggtagagg cgacaaacct accgagcctg gtgatagctg gttgtccaag atagaatctt 2040 agttcaactt taaatttgcc cacagaaccc tctaaatccc cttgtaaatt taactgttag 2100 tccaaagagg aacagctctt tggacactag gaaaaaacct tgtagagaga gtaaaaaatt 2160 taacacccat agtaggccta aaagcagcca ccaattaaga aagcgttcaa gctcaacacc 2220 cactacctaa aaaatcccaa acatataact gaactcctca cacccaattg gaccaatcta 2280 tcaccctata gaagaactaa tgttagtata agtaacatga aaacattctc ctccgcataa 2340 gcctgcgtca gattaaaaca ctgaactgac aattaacagc ccaatatcta caatcaacca 2400 acaagtcatt attaccctca ctgtcaaccc aacacaggca tgctcataag gaaaggttaa 2460 aaaaagtaaa aggaactcgg caaatcctta ccccgcctgt ttaccaaaaa catcacctct 2520 agcatcacca gtattagagg caccgcctgc ccagtgacac atgtttaacg gccgcggtac 2580 cctaaccgtg caaaggtagc ataatcactt gttccttaaa tagggacctg tatgaatggc 2640 tccacgaggg ttcagctgtc tcttactttt aaccagtgaa attgacctgc ccgtgaagag 2700 gcgggcataa cacagcaaga cgagaagacc ctatggagct ttaatttatt aatgcaaaca 2760 atacctaaca aacccacagg tcctaaacta ccaaacctgc attaaaaatt tcggttgggg 2820 cgacctcgga gcagaaccca acctccgagc agtacatgct aagacttcac cagtcaaagc 2880 gaactaccat actcaattga tccaataact tgaccaacgg aacaagttac cctagggata 2940 acagcgcaat cctattctag agtccatatc aacaataggg tttacgacct cgatgttgga 3000 tcaggacatc ccgatggtgc agccgctatt aaaggttcgt ttgttcaacg attaaagtcc 3060 tacgtgatct gagttcagac cggagtaatc caggtcggtt tctatctact tcaaattcct 3120 ccctgtacga aaggacaaga gaaataaggc ctacttcaca aagcgccttc ccccgtaaat 3180 gatatcatct caacttagta ttatacccac acccacccaa gaacagggtt tgttaagatg 3240 gcagagcccg gtaatcgcat aaaacttaaa actttacagt cagaggttca attcctcttc 3300 ttaacaacat acccatggcc aacctcctac tcctcattgt acccattcta atcgcaatgg 3360 cattcctaat gcttaccgaa cgaaaaattc taggctatat acaactacgc aaaggcccca 3420 acgttgtagg cccctacgga ctactacaac ccttcgctga cgccataaaa ctcttcacca 3480 aagagcccct aaaacccgcc acatctacca tcaccctata catcaccgcc ccaaccttag 3540 ctctcaccat cgctcttcta ctatgaaccc ccctccccat acccaacccc ctggttaacc 3600 tcaacctagg cctcctattc attctagcca cctctagcct agccgtttac tcaatcctct 3660 gatcagggtg agcatcaaac tcaaactacg ccctgatcgg cgcactgcga gcagtagccc 3720 aaacaatctc atatgaagtc accctagcca tcattctgct atcaacatta ctaataagtg 3780 gctcctttaa cctctccacc cttatcacaa cacaagaaca cctctgatta ctcctgccat 3840 catgaccctt ggccataata tgatttatct ccacactagc agagaccaac cgaaccccct 3900 tcgaccttgc cgaaggggag tccgaactag tctcaggctt caacatcgaa tacgccgcag 3960 gccccttcgc cctattcttc atagccgaat acacaaacat tattataata aacaccctca 4020 ccactacaat cttcctagga acaacatatg acgcactctc ccctgaactc tacacaacat 4080 attttgtcac caagacccta cttctgacct ccctgttctt atgaattcga acagcatacc 4140 cccgattccg ctacgaccaa ctcatacacc tcctatgaaa aaacttccta ccactcaccc 4200 tagcattact tatatgatat gtctccatac ccactacaat ctccagcatt ccccctcaaa 4260 cctaagaaat atgtctgata aaagagttac tttgatagag taaataatag gagtttaaac 4320 ccccttattt ctaggactat gagaatcgaa cccatccctg agaatccaaa attctccgtg 4380 ccacctatca caccccatcc taaagtaagg tcagctaaat aagctatcgg gcccataccc 4440 cgaaaatgtt ggttataccc ttcccgtact aattaatccc ctggcccaac ccgtcatcta 4500 ctctaccatc tttgcaggca cactcatcac agcgctaagc tcgcactgat tttttacctg 4560 agtcggccta gaaataaaca tgctagcttt tattccagtt ctaaccaaaa aaataaaccc 4620 tcgttccaca gaagctgcca tcaagtattt cctcacgcaa gcaaccgcat ccataatcct 4680 tctaatagct atcctcttca acaatatact ctccggacaa tgaaccataa ccaatactac 4740 caatcaatac tcatcattaa taatcataat ggctatagca ataaaactag gaatagcccc 4800 ctttcacttc tgagtcccag aggttaccca aggcacccct ctgacatccg gcctgcttct 4860 tctcacatga caaaaactag cccccatctc aatcatatac caaatctctc cctcactaaa 4920 cgtaagcctt ctcctcactc tctcaatctt atccatcata gcaggcagtt gaggtggatt 4980 aaaccaaacc cagctacgca aaatcttagc atactcctca attacccaca taggatgaat 5040 aatagcagtt ctaccgtaca accctaacat aaccattctt aatttaacta tttatattat 5100 cctaactact accgcattcc tactactcaa cttaaactcc agcaccacga ccctactact 5160 atctcgcacc tgaaacaagc taacatgact aacaccctta attccatcca ccctcctctc 5220 cctaggaggc ctgcccccgc taaccggctt tttgcccaaa tgggccatta tcgaagaatt 5280 cacaaaaaac aatagcctca tcatccccac catcatagcc accatcaccc tccttaacct 5340 ctacttctac ctacgcctaa tctactccac ctcaatcaca ctactcccca tatctaacaa 5400 cgtaaaaata aaatgacagt ttgaacatac aaaacccacc ccactcctcc ccacactcat 5460 cgcccttacc acgctactcc tacctatctc cccttttata ctaataatct tatagaaatt 5520 taggttaaat acagaccaag agccttcaaa gccctcagta agttgcaata cttaatttct 5580 gtaacagcta aggactgcaa aaccccactc tgcatcaact gaacgcaaat cagccacttt 5640 aattaagcta agcccttact agaccaatgg gacttaaacc cacaaacact tagttaacag 5700 ctaagcaccc taatcaactg gcttcaatct acttctcccg ccgccgggaa aaaaggcggg 5760 agaagccccg gcaggtttga agctgcttct tcgaatttgc aattcaatat gaaaatcacc 5820 tcggagctgg taaaaagagg cctaacccct gtctttagat ttacagtcca atgcttcact 5880 cagccatttt acctcacccc cactgatgtt cgccgaccgt tgactattct ctacaaacca 5940 caaagacatt ggaacactat acctattatt cggcgcatga gctggagtcc taggcacagc 6000 tctaagcctc cttattcgag ccgagctggg ccagccaggc aaccttctag gtaacgacca 6060 catctacaac gttatcgtca cagcccatgc atttgtaata atcttcttca tagtaatacc 6120 catcataatc ggaggctttg gcaactgact agttccccta ataatcggtg cccccgatat 6180 ggcgttcccc cgcataaaca acataagctt ctgactctta cctccctctc tcctactcct 6240 gctcgcatct gctatagtgg aggccggggc aggaacaggt tgaacagtct accctccctt 6300 agcagggaac tactcccacc ctggagcctc cgtagaccta accatcttct ccttacacct 6360 agcaggtgtc tcctctatct taggggccat caatttcatc acaacaatta tcaatataaa 6420 accccctgcc ataacccaat accaaacgcc cctcttcgtc tgatccgtcc taatcacagc 6480 agtcctactt ctcctatctc tcccagtcct agctgctggc atcactatac tactaacaga 6540 ccgcaacctc aacaccacct tcttcgaccc cgccggagga ggagacccca ttctatacca 6600 acacctattc tgatttttcg gtcaccctga agtttatatt cttatcctac caggcttcgg 6660 aataatctcc catattgtaa cttactactc cggaaaaaaa gaaccatttg gatacatagg 6720 tatggtctga gctatgatat caattggctt cctagggttt atcgtgtgag cacaccatat 6780 atttacagta ggaatagacg tagacacacg agcatacttc acctccgcta ccataatcat 6840 cgctatcccc accggcgtca aagtatttag ctgactcgcc acactccacg gaagcaatat 6900 gaaatgatct gctgcagtgc tctgagccct aggattcatc tttcttttca ccgtaggtgg 6960 cctgactggc attgtattag caaactcatc actagacatc gtactacacg acacgtacta 7020 cgttgtagct cacttccact atgtcctatc aataggagct gtatttgcca tcataggagg 7080 cttcattcac tgatttcccc tattctcagg ctacacccta gaccaaacct acgccaaaat 7140 ccatttcgct atcatattca tcggcgtaaa tctaactttc ttcccacaac actttctcgg 7200 cctatccgga atgccccgac gttactcgga ctaccccgat gcatacacca catgaaatat 7260 cctatcatct gtaggctcat tcatttctct aacagcagta atattaataa ttttcatgat 7320 ttgagaagcc ttcgcttcga agcgaaaagt cctaatagta gaagaaccct ccataaacct 7380 ggagtgacta tatggatgcc ccccacccta ccacacattc gaagaacccg tatacataaa 7440 atctagacaa aaaaggaagg aatcgaaccc cccaaagctg gtttcaagcc aaccccatgg 7500 cctccatgac tttttcaaaa agatattaga aaaaccattt cataactttg tcaaagttaa 7560 attataggct aaatcctata tatcttaatg gcacatgcag cgcaagtagg tctacaagac 7620 gctacttccc ctatcataga agagcttatc acctttcatg atcacgccct cataatcatt 7680 ttccttatct gcttcctagt cctgtatgcc cttttcctaa cactcacaac aaaactaact 7740 aatactaaca tctcagacgc tcaggaaata gaaaccgtct gaactatcct gcccgccatc 7800 atcctagtcc tcatcgccct cccatcccta cgcatccttt acataacaga cgaggtcaac 7860 gatccctccc ttaccatcaa atcaattggc caccaatggt actgaaccta cgagtacacc 7920 gactacggcg gactaatctt caactcctac atacttcccc cattattcct agaaccaggc 7980 gacctgcgac tccttgacgt tgacaatcga gtagtactcc cgattgaaac ccccattcgt 8040 ataataatta catcacaaga cgtcttgcac tcatgagctg tccccacatt aggcttaaaa 8100 acagatgcaa ttccaggacg tctaaaccaa accactttca ccgctacacg accaggggta 8160 tactacggtc aatgctctga aatctgtgga gcaaaccaca gtttcatgcc catcgtccta 8220 gaattaattc ccctaaaaat ctttgaaata ggacccgtat ttaccctata gcaccccctc 8280 taccccctct agagcccact gtaaagctaa cttagcatta accttttaag ttaaagatta 8340 agagaaccaa cacctcttta cagtgaaatg ccccaactaa atactaccgt atggcccacc 8400 ataattaccc ccatactcct tacactattc ctcatcaccc aactaaaaat attaaacaca 8460 aactaccact tacctccctc accaaagccc ataaaaataa aaaattataa caaaccctga 8520 gaaccaaaat gaacgaaaat ctgttcgctt cattcattgc ccccacaatc ctaggcctac 8580 ccgccgcagt actgatcatt ctatttcccc ctctattgat ccccacctcc aaatatctca 8640 tcaacaaccg actaattacc acccaacaat gactaatcaa actaacctca aaacaaatga 8700 tagccataca caacactaaa ggacgaacct gatctcttat actagtatcc ttaatcattt 8760 ttattgccac aactaacctc ctcggactcc tgcctcactc atttacacca accacccaac 8820 tatctataaa cctagccatg gccatcccct tatgagcggg cgcagtgatt ataggctttc 8880 gctctaagat taaaaatgcc ctagcccact tcttaccaca aggcacacct acacccctta 8940 tccccatact agttattatc gaaaccatca gcctactcat tcaaccaata gccctggccg 9000 tacgcctaac cgctaacatt actgcaggcc acctactcat gcatctaatt ggaagcgcca 9060 ccctagcaat atcaaccatt aaccttccct ctacacttat catcttcaca attctaattc 9120 tactgactat cctagaaatc gctgtcgcct taatccaagc ctacgttttc acacttctag 9180 taagcctcta cctgcacgac aacacataat gacccaccaa tcacatgcct atcatatagt 9240 aaaacccagc ccatgacccc taacaggggc cctctcagcc ctcctaatga cctccggcct 9300 agccatgtga tttcacttcc actccataac gctcctcata ctaggcctgc taaccaacac 9360 actaaccata taccaatgat ggcgcgatgt aacacgagaa agcacatacc aaggccacca 9420 cacaccacct gtccaaaaag gccttcgata cgggataatc ctatttatta cctcagaagt 9480 ttttttcttc gcaggatttt tctgagcctt ttaccactcc agcctagccc ctacccccca 9540 actaggaggg cactggcccc caacaggcat caccccgcta aatcccctag aagtcccact 9600 cctaaacaca tccgtattac tcgcatcagg agtatcaatc acctgagctc accatagtct 9660 aatagaaaac aaccgaaacc aaataattca agcactgctt attacaattt tactgggtct 9720 ctattttacc ctcctacaag cctcagagta cttcgaatct cccttcacca tttccgacgg 9780 catctacggc tcaacatttt ttgtagccac aggcttccac ggacttcacg tcattattgg 9840 ctcaactttc ctcactatct gcttcatccg ccaactaata tttcacttta catccaaaca 9900 tcactttggc ttcgaagccg ccgcctgata ctggcatttt gtagatgtgg tttgactatt 9960 tctgtatgtc tccatctatt gatgagggtc ttactctttt agtataaata gtaccgttaa 10020 cttccaatta actagttttg acaacattca aaaaagagta ataaacttcg ccttaatttt 10080 aataatcaac accctcctag ccttactact aataattatt acattttgac taccacaact 10140 caacggctac atagaaaaat ccacccctta cgagtgcggc ttcgacccta tatcccccgc 10200 ccgcgtccct ttctccataa aattcttctt agtagctatt accttcttat tatttgatct 10260 agaaattgcc ctccttttac ccctaccatg agccctacaa acaactaacc tgccactaat 10320 agttatgtca tccctcttat taatcatcat cctagcccta agtctggcct atgagtgact 10380 acaaaaagga ttagactgaa ccgaattggt atatagttta aacaaaacga atgatttcga 10440 ctcattaaat tatgataatc atatttacca aatgcccctc atttacataa atattatact 10500 agcatttacc atctcacttc taggaatact agtatatcgc tcacacctca tatcctccct 10560 actatgccta gaaggaataa tactatcgct attcattata gctactctca taaccctcaa 10620 cacccactcc ctcttagcca atattgtgcc tattgccata ctagtttttg ccgcctgcga 10680 agcagcggta ggcctagccc tactagtcgc aatctccaac acatatggcc tagactacgt 10740 acataaccta aacctactcc aatgctaaaa ctaatcgtcc caacaattat attactacca 10800 ctgacatgac tctccaaaaa acacataatt tgaatcaaca caaccaccca cagcctaatt 10860 attagcatca tccccctact attttttaac caaatcaaca acaacctatt tagctgctcc 10920 ccaacctttt cctccgaccc cctaacaacc cccctcctaa tactaactac ctgactccta 10980 cccctcacaa tcatggcaag ccaacgccac ttatccagtg aaccactatc acgaaaaaaa 11040 ctctacctct ctatactaat ctccctacaa atctccttaa ttataacatt cacagccaca 11100 gaactaatca tattttatat cttcttcgaa accacactta tccccacctt ggctatcatc 11160 acccgatgag gcaaccagcc agaacgcctg aacgcaggca catacttcct attctacacc 11220 ctagtaggct cccttcccct actcatcgca ctaatttaca ctcacaacac cctaggctca 11280 ctaaacattc tactactcac tctcactgcc caagaactat caaactcctg agccaacaac 11340 ttaatatgac tagcttacac aatagctttt atagtaaaga tacctcttta cggactccac 11400 ttatgactcc ctaaagccca tgtcgaagcc cccatcgctg ggtcaatagt acttgccgca 11460 gtactcttaa aactaggcgg ctatggtata atacgcctca cactcattct caaccccctg 11520 acaaaacaca tagcctaccc cttccttgta ctatccctat gaggcataat tataacaagc 11580 tccatctgcc tacgacaaac agacctaaaa tcgctcattg catactcttc aatcagccac 11640 atagccctcg tagtaacagc cattctcatc caaaccccct gaagcttcac cggcgcagtc 11700 attctcataa tcgcccacgg acttacatcc tcattactat tctgcctagc aaactcaaac 11760 tacgaacgca ctcacagtcg catcataatc ctctctcaag gacttcaaac tctactccca 11820 ctaatagctt tttgatgact tctagcaagc ctcgctaacc tcgccttacc ccccactatt 11880 aacctactgg gagaactctc tgtgctagta accacattct cctgatcaaa tatcactctc 11940 ctacttacag gactcaacat actagtcaca gccctatact ccctctacat atttaccaca 12000 acacaatgag gctcactcac ccaccacatt aacaacataa aaccctcatt cacacgagaa 12060 aacaccctca tgttcataca cctatccccc attctcctcc tatccctcaa ccccgacatc 12120 atcaccgggt tttcctcttg taaatatagt ttaaccaaaa catcagattg tgaatctgac 12180 aacagaggct tacgacccct tatttaccga gaaagctcac aagaactgct aactcatgcc 12240 cccatgtcta acaacatggc tttctcaact tttaaaggat aacagctatc cattggtctt 12300 aggccccaaa aattttggtg caactccaaa taaaagtaat aaccatgcac actactataa 12360 ccaccctaac cctgacttcc ctaattcccc ccatccttac caccctcgtt aaccctaaca 12420 aaaaaaactc atacccccat tatgtaaaat ccattgtcgc atccaccttt attatcagtc 12480 tcttccccac aacaatattc atgtgcctag accaagaagt tattatctcg aactgacact 12540 gagccacaac ccaaacaacc cagctctccc taagcttcaa actagactac ttctccataa 12600 tattcatccc tgtagcattg ttcgttacat ggtccatcat agaattctca ctgtgatata 12660 taaactcaga cccaaacatt aatcagttct tcaaatatct actcattttc ctaattacca 12720 tgctaatctt agttaccgct aacaacctat tccaactgtt catcggctga gagggcgtag 12780 gaattatatc cttcttgctc atcagttgat gatacgcccg agcagatgcc aacacagcag 12840 ccattcaagc aatcctatac aaccgtatcg gcgatatcgg tttcatcctc gccttagcat 12900 gatttatcct acactccaac tcatgagacc cacaacaaat agcccttcta aacgctaatc 12960 caagcctcac cccactacta ggcctcctcc tagcagcagc aggcaaatca gcccaattag 13020 gtctccaccc ctgactcccc tcagccatag aaggccccac cccagtctca gccctactcc 13080 actcaagcac tatagttgta gcaggagtct tcttactcat ccgcttccac cccctagcag 13140 aaaatagccc actaatccaa actctaacac tatgcttagg cgctatcacc actctgttcg 13200 cagcagtctg cgcccttaca caaaatgaca tcaaaaaaat cgtagccttc tccacttcaa 13260 gtcaactagg actcatagta gttacaatcg gcatcaacca accacaccta gcattcctgc 13320 acatctgtac ccacgccttc ttcaaagcca tactatttat gtgctccggg tccatcatcc 13380 acaaccttaa caatgaacaa gatattcgaa aaataggagg actactcaaa accatacctc 13440 tcacttcaac ctccctcacc attggcagcc tagcattagc aggaatacct ttcctcacag 13500 gtttctattc caaagaccac atcatcgaaa ccgcaaacat atcatacaca aacgcctgag 13560 ccctatctat tactctcatc gctacctccc tgacaagcgc ctatagcact cgaataattc 13620 ttctcaccct aacaggtcaa cctcgcttcc ctacccttac taacattaac gaaaataacc 13680 ccaccctact aaaccccatt aaacgcctgg cagccggaag cctattcgca ggatttctca 13740 ttactaacaa catttccccc acatccccct tccaaacaac aatccccctc tacctaaaac 13800 tcacagccct cgctgtcact ttcctaggac ttctaacagc cctagacctc aactacctaa 13860 ccaacaaact taaaataaaa tccccactat gcacatttta tttctccaac atactcggat 13920 tctaccctag catcacacac cgcacaatcc cctatctagg ccttcttacg agccaaaacc 13980 tgcccctact cctcctagac ctaacctgac tagaaaagct attacctaaa acaatttcac 14040 agcaccaaat ctccacctcc atcatcacct caacccaaaa aggcataatt aaactttact 14100 tcctctcttt cttcttccca ctcatcctaa ccctactcct aatcacataa cctattcccc 14160 cgagcaatct caattacaat atatacacca acaaacaatg ttcaaccagt aactactact 14220 aatcaacgcc cataatcata caaagccccc gcaccaatag gatcctcccg aatcaaccct 14280 gacccctctc cttcataaat tattcagctt cctacactat taaagtttac cacaaccacc 14340 accccatcat actctttcac ccacagcacc aatcctacct ccatcgctaa ccccactaaa 14400 acactcacca agacctcaac ccctgacccc catgcctcag gatactcctc aatagccatc 14460 gctgtagtat atccaaagac aaccatcatt ccccctaaat aaattaaaaa aactattaaa 14520 cccatataac ctcccccaaa attcagaata ataacacacc cgaccacacc gctaacaatc 14580 aatactaaac ccccataaat aggagaaggc ttagaagaaa accccacaaa ccccattact 14640 aaacccacac tcaacagaaa caaagcatac atcattattc tcgcacggac tacaaccacg 14700 accaatgata tgaaaaacca tcgttgtatt tcaactacaa gaacaccaat gaccccaata 14760 cgcaaaatta accccctaat aaaattaatt aaccactcat tcatcgacct ccccacccca 14820 tccaacatct ccgcatgatg aaacttcggc tcactccttg gcgcctgcct gatcctccaa 14880 atcaccacag gactattcct agccatgcac tactcaccag acgcctcaac cgccttttca 14940 tcaatcgccc acatcactcg agacgtaaat tatggctgaa tcatccgcta ccttcacgcc 15000 aatggcgcct caatattctt tatctgcctc ttcctacaca tcgggcgagg cctatattac 15060 ggatcatttc tctactcaga aacctgaaac atcggcatta tcctcctgct tgcaactata 15120 gcaacagcct tcataggcta tgtcctcccg tgaggccaaa tatcattctg aggggccaca 15180 gtaattacaa acttactatc cgccatccca tacattggaa cagacctagt tcaatgaatc 15240 tgaggaggct actcagtaga cagtcccacc ctcacacgat tctttacctt tcacttcatc 15300 ttgcccttca ttattacagc cctagcagca ctccacctcc tattcttgca cgaaacggga 15360 tcaaacaacc ccctaggaat cacctcccat tccgataaaa tcaccttcca cccttactac 15420 acaatcaaag acgccctcgg cttacttctc ttccttctct ccttaataac attaacacta 15480 ctctcaccag acctcctagg cgacccagac aattataccc tagccaaccc cttaaacacc 15540 cctccccaca tcaagcccga atgatatttc ctattcgcct acacaattct ccgatccgtc 15600 cctaacaaac taggaggcgt ccttgcccta ttactatcca tcctcatcct agcaataatc 15660 cccatcctcc atatatccaa acaacaaagc ataatatttc gcccactaag ccaatcactt 15720 tattgactcc tagccgcaga cctcctcatt ctaacctgaa tcggaggaca accagtaagc 15780 taccctttta ccatcattgg acaagtagca tccgtactat acttcacaac aatcctaatc 15840 ctaataccaa ctatctccct aattgaaaac aaaatactca aatgggcctg tccttgtagt 15900 ataaactaat acaccagtct tgtaaaccgg aaatgaaaac ctctttccaa ggacaaatca 15960 gagaaaaagt ctttaactcc accattagca cccaaagcta agattctaat ttaaactatt 16020 ctctgttctt tcatggggaa gcagatttgg gtaccaccca agtattgact cacccatcaa 16080 caaccgctat gtatttcgta cattactgcc agccaccatg aatattgtac agtaccataa 16140 atacttgacc acctgtagta cataaaaacc caatccacat taaaaccctc cccccatgct 16200 tacaagcaag tacagcaatc aaccttcaac tgtcacacat caaccgcaac tccaaagcca 16260 cccctcaccc actaggatac caacaaacct acccaccctt aacagtacat agcacataaa 16320 gccatttacc gtacatagca cattacagtc aaatcccttc tcgtccccat ggatgacccc 16380 cctcagatag gggtcccttg gccaccatcc tccgtgaaat caatatcccg cacaagagtg 16440 ctactctcct cgctccgggc ccataacact tgggggtagc taaagtgaac tgtatccgac 16500 atctggttcc tacttcaggg ccataaagcc taaatagccc acacgttccc cttaaataag 16560 acatcacgat g 16571 // ID KC345803; SV 1; circular; genomic DNA; STD; HUM; 16567 BP. XX AC KC345803; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT6_166 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16567 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16567 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; 215f63ebcdb411525bcebc7f8043b84c. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16567 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT6_166" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="Buga" FT /db_xref="taxon:9606" FT /haplogroup="L0k" FT D-loop complement(join(16022..16567,1..575)) FT tRNA 576..646 FT /product="tRNA-Phe" FT rRNA 647..1600 FT /product="12S ribosomal RNA" FT tRNA 1601..1669 FT /product="tRNA-Val" FT rRNA 1670..3227 FT /product="16S ribosomal RNA" FT tRNA 3228..3302 FT /product="tRNA-Leu" FT gene 3305..4260 FT /gene="ND1" FT CDS 3305..4260 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4259..4260,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82394.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPITISSIPPQT" FT tRNA 4261..4329 FT /product="tRNA-Ile" FT tRNA complement(4327..4398) FT /product="tRNA-Gln" FT tRNA 4400..4467 FT /product="tRNA-Met" FT gene 4468..5509 FT /gene="ND2" FT CDS 4468..5509 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5509,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82395.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5510..5574 FT /product="tRNA-Trp" FT tRNA complement(5585..5653) FT /product="tRNA-Ala" FT tRNA complement(5655..5727) FT /product="tRNA-Asn" FT tRNA complement(5759..5824) FT /product="tRNA-Cys" FT tRNA complement(5824..5889) FT /product="tRNA-Tyr" FT gene 5902..7443 FT /gene="COX1" FT CDS 5902..7443 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B2U9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B2U9" FT /protein_id="AGD82396.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNVLSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7443..7514) FT /product="tRNA-Ser" FT tRNA 7516..7583 FT /product="tRNA-Asp" FT gene 7584..8267 FT /gene="COX2" FT CDS 7584..8267 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /protein_id="AGD82397.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8293..8362 FT /product="tRNA-Lys" FT gene 8364..8570 FT /gene="ATP8" FT CDS 8364..8570 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82398.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8525..9205 FT /gene="ATP6" FT CDS 8525..9205 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B1L8" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B1L8" FT /protein_id="AGD82399.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEVAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9205..9988 FT /gene="COX3" FT CDS 9205..9988 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9988,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82400.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9989..10056 FT /product="tRNA-Gly" FT gene 10057..10402 FT /gene="ND3" FT CDS 10057..10402 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10402,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82401.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWAE" FT tRNA 10403..10467 FT /product="tRNA-Arg" FT gene 10468..10764 FT /gene="ND4L" FT CDS 10468..10764 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AGD82402.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10758..12135 FT /gene="ND4" FT CDS 10758..12135 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12135,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9B1S7" FT /db_xref="InterPro:IPR000260" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="InterPro:IPR010227" FT /db_xref="UniProtKB/TrEMBL:Q9B1S7" FT /protein_id="AGD82403.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSLTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12136..12204 FT /product="tRNA-His" FT tRNA 12205..12263 FT /product="tRNA-Ser" FT tRNA 12264..12334 FT /product="tRNA-Leu" FT gene 12335..14146 FT /gene="ND5" FT CDS 12335..14146 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q9B1F8" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q9B1F8" FT /protein_id="AGD82404.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPASPFQTTIPLYLKLTALAVTLLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPTITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14147..14671) FT /gene="ND6" FT CDS complement(14147..14671) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82405.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14672..14740) FT /product="tRNA-Glu" FT gene 14745..15885 FT /gene="CYTB" FT CDS 14745..15885 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15885,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q6VJ80" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q6VJ80" FT /protein_id="AGD82406.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15886..15951 FT /product="tRNA-Thr" FT tRNA complement(15953..16021) FT /product="tRNA-Pro" XX SQ Sequence 16567 BP; 5117 A; 5185 C; 2177 G; 4088 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcgagc atacctacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tattttcccc tcccactccc atactactaa 480 tctcatcaat acaacccccg cccatcctac ccagcacaca caccgctgct aaccccatac 540 cccgaaccaa ccaaacccca aagacacccc ccacagttta tgtagcttac ctcctcaaag 600 caatacactg aaaatgttta gacgggctca catcacccca taaacaaata ggtttggtcc 660 tagcctttct attagctctt agtaagatta cacatgcaag catccccgtt ccagtgagtt 720 caccctctaa atcaccacga tcaaaaggga caagcatcaa gcacgcaaca atgcagctca 780 aaacgcttag cctagccaca cccccacggg aaacagcagt gataaacctt tagcaataaa 840 cgaaagttca actaagctat actaacccca gggttggtca atttcgtgcc agccaccgcg 900 gtcacacgat taacccaagt caatagaagc cggcgtaaag agtgttttag atcaccccct 960 ccccaataaa gctaaaactc acctgagttg taaaaaactc cagttgacac aaaataaact 1020 acgaaagtgg ctttaacata tctgaataca caatagctaa gacccaaact gggattagat 1080 accccactat gcttagccct aaacctcaac agttaaatca acaaaactgc tcgccagaac 1140 actacgagcc acagcttaaa actcaaagga cctggcggtg cttcatatcc ctctagagga 1200 gcctgttctg taatcgataa accccgatca acctcaccac cccttgctca gcctatatac 1260 cgccatcttc agcaaaccct gatgaaggct acaaagtaag cgcaagtacc cacgtaaaga 1320 cgttaggtca aggtgtagcc catgaggtgg caagaaatgg gctacatttt ctaccccaga 1380 aaactacgat agcccttatg aaacttaagg gtcgaaggtg gatttagcag taaactgaga 1440 gtagagtgct tagttgaaca gggccctgaa gcgcgtacac accgcccgtc accctcctca 1500 agtatacttc aaaggacatt taactaaaac ccctacgcat ttatatagag gagacaagtc 1560 gtaacatggt aagtgtactg gaaagtgcac ttggacgaac cagagtgtag cttaacacaa 1620 agcacccaac ttacacttag gagatttcaa cttaacttga ccgctctgag ctaaacctag 1680 ccccaaaccc actccacctt actaccagac aaccttagcc aaaccattta cccaaataaa 1740 gtataggcga tagaaattga aacctggcgc aatagatata gtaccgcaag ggaaagatga 1800 aaaattataa ccaagcataa tatagcaagg actaacccct ataccttctg cataatgaat 1860 taactagaaa taactttgca aggagagcca aagctaagac ccccgaaacc agacgagcta 1920 cctaagaaca gctaaaagag cacacccgtc tatgtagcaa aatagtggga agatttatag 1980 gtagaggcga caaacctacc gagcctggtg atagctggtt gtccaagata gaatcttagt 2040 tcaactttaa atttgcccac agaaccctct aaatcccctt gtaaatttaa ctgttagtcc 2100 aaagaggaac agctctttgg acactaggaa aaaaccttgt agagagagta aaaaatttaa 2160 cacccatagt aggcctaaaa gcagccacca attaagaaag cgttcaagct caacacccac 2220 tacctaaaaa atcccaaaca tataactgaa ctcctcacac ccaattggac caatctatca 2280 ccctatagaa gaactaatgt tagtataagt aacatgaaaa cattctcctc cgcataagcc 2340 tgcgtcagat taaaacactg aactgacaat taacagccca atatctacaa tcaaccaaca 2400 agtcattatt accctcactg tcaacccaac acaggcatgc tcataaggaa aggttaaaaa 2460 aagtaaaagg aactcggcaa atcttacccc gcctgtttac caaaaacatc acctctagca 2520 tcaccagtat tagaggcacc gcctgcccag tgacacatgt ttaacggccg cggtacccta 2580 accgtgcaaa ggtagcataa tcacttgttc cttaaatagg gacctgtatg aatggctcca 2640 cgagggttca gctgtctctt acttttaacc agtgaaattg acctgcccgt gaagaggcgg 2700 gcatgacaca gcaagacgag aagaccctat ggagctttaa tttattaatg caaacaatac 2760 ctaacaaacc cacaggtcct aaactaccaa acctgcatta aaaatttcgg ttggggcgac 2820 ctcggagcag aaccaaacct ccgagcagta catgctaaga cttcaccagt caaagcgaac 2880 taccatactc aattgatcca ataacttgac caacggaaca agttacccta gggataacag 2940 cgcaatccta ttctagagtc catatcaaca atagggttta cgacctcgat gttggatcag 3000 gacatcccga tggtgcagcc gctattaaag gttcgtttgt tcaacgatta aagtcctacg 3060 tgatctgagt tcagaccgga gtaatccagg tcggtttcta tctacttcaa attcctccct 3120 gtacgaaagg acaagagaaa taaggcctac ttcacaaagc gccttccccc gtaaatgata 3180 tcatctcaac ttagtattat acccacaccc acccaagaac agggtttgtt aagatggcag 3240 agcccggtaa tcgcataaaa cttaaaactt tacagtcaga ggttcaattc ctcttcttaa 3300 caacataccc atggccaacc tcctactcct cattgtaccc attctaatcg caatggcatt 3360 cctaatgctt accgaacgaa aaattctagg ctatatacaa ctacgcaaag gccccaacgt 3420 tgtaggcccc tacgggctac tacaaccctt cgctgacgcc ataaaactct tcaccaaaga 3480 gcccctaaaa cccgccacat ctaccatcac cctatacatc accgccccga ccttagctct 3540 caccatcgct cttctactat gaacccccct ccccataccc aaccccctgg ttaacctcaa 3600 cctaggcctc ctatttattc tagccacctc tagcctagcc gtttactcaa tcctctgatc 3660 agggtgagca tcaaactcaa actacgccct gatcggcgca ctgcgagcag tagcccaaac 3720 aatctcatat gaagtcaccc tagccatcat tctactatca acattactaa taagtggctc 3780 ctttaacctc tccaccctta tcacaacaca agaacacctc tgattactcc tgccatcatg 3840 acccttggcc ataatatgat ttatctccac actagcagag accaaccgaa cccccttcga 3900 ccttgccgaa ggggagtccg aactagtctc aggcttcaac atcgaatacg ccgcaggccc 3960 cttcgcccta ttcttcatag ccgaatacac aaacattatt ataataaaca ccctcaccac 4020 tacaatcttc ctaggaacaa catatgacgc actctcccct gaactctaca caacatattt 4080 tgtcaccaag accctacttc tgacctccct gttcttatga attcgaacag catacccccg 4140 attccgctac gaccaactca tacacctcct atgaaaaaac ttcctaccac tcaccctagc 4200 attacttata tgatatgtct ccatacccat tacaatctcc agcattcccc ctcaaaccta 4260 agaaatatgt ctgataaaag agttactttg atagagtaaa taataggagt ttaaaccccc 4320 ttatttctag gactatgaga atcgaaccca tccctgagaa tccaaaattc tccgtgccac 4380 ctatcacacc ccatcctaaa gtaaggtcag ctaaataagc tatcgggccc ataccccgaa 4440 aatgttggtt atacccttcc cgtactaatt aatcccctgg cccaacccgt catctactct 4500 accatctttg caggcacact catcacagcg ctaagctcac actgattttt tacctgagta 4560 ggcctagaaa taaacatgct agcctttatt ccagttctaa ccaaaaaaat aaaccctcgt 4620 tccacagaag ctgccatcaa gtatttcctc acgcaagcaa ccgcatccat aatccttcta 4680 atagctatcc tcttcaacaa tatactctcc ggacaatgaa ccataaccaa tactaccaat 4740 caatactcat cattaataat cataatggct atagcaataa aactaggaat agcccccttt 4800 cacttctgag tcccagaggt tacccaaggc acccctctga catccggcct gcttcttctc 4860 acatgacaaa aactagcccc catctcaatc atataccaaa tctccccctc actaaacgta 4920 agccttctcc tcactctctc aatcttatcc atcatagcag gcagttgagg tggattaaac 4980 caaacccagc tacgcaaaat cttagcatac tcctcaatta cccacatagg atgaataata 5040 gcagttctac cgtacaaccc taacataacc attcttaatt taactattta tattatccta 5100 actactaccg cattcctact actcaactta aactccagca ccacgaccct actactatct 5160 cgcacctgaa acaagctaac atgactaaca cccttaattc catccaccct cctctcccta 5220 ggaggcctgc ccccgctaac cggctttttg cccaaatggg ccattatcga agaattcaca 5280 aaaaacaata gcctcatcat ccccaccatc atagccacca tcaccctcct taacctctac 5340 ttctacctac gcctaatcta ctccacctca atcacactac tccccatatc taacaacgta 5400 aaaataaaat gacagtttga acatacaaaa cccaccccac tcctccccac actcatcgcc 5460 cttaccacgc tactcctacc tatctcccct tttatactaa taatcttata gaaatttagg 5520 ttaaatacag accaagagcc ttcaaagccc tcagtaagtt gcaatactta atttctgtaa 5580 cagctaagga ctgcaaaacc ccactctgca tcaactgaac gcaaatcagc cactttaatt 5640 aagctaagcc cttactagac caatgggact taaacccaca aacacttagt taacagctaa 5700 gcaccctaat caactggctt caatctactt ctcccgccgc cgggaaaaaa ggcgggagaa 5760 gccccggcag gtttgaagct gcttcttcga atttgcaatt caatatgaga atcacctcgg 5820 agctggtaaa aagaggccta acccctgtct ttagatttac agtccaatgc ttcactcagc 5880 cattttacct cacccccact gatgttcgcc gaccgttgac tattctctac aaaccacaaa 5940 gacattggaa cactatacct attattcggc gcatgagctg gagtcctagg cacagctcta 6000 agcctcctta ttcgagccga gctgggccag ccaggcaacc ttctaggtaa cgaccacatc 6060 tacaacgtta tcgtcacagc ccatgcattt gtaataatct tcttcatagt aatacccatc 6120 ataatcggag gctttggcaa ctgactagtt cccctaataa tcggtgcccc cgatatggcg 6180 ttcccccgca taaacaacat aagcttctga ctcttacctc cctctctcct actcctgctc 6240 gcatctgcta tagtggaggc cggagcagga acaggttgaa cagtctaccc tcccttagca 6300 gggaactact cccaccctgg agcctccgta gacctaacca tcttctcctt acacctagca 6360 ggtgtctcct ctatcttagg ggccatcaat ttcatcacaa caattatcaa tataaaaccc 6420 cctgccataa cccaatacca aacgcccctc ttcgtctgat ccgtcctaat cacagcagtc 6480 ctacttctcc tatctctccc agtcctagct gctggcatca ctatactact aacagaccgc 6540 aacctcaaca ccaccttctt cgaccccgcc ggaggaggag accccattct ataccaacac 6600 ctattctgat ttttcggtca ccctgaagtt tatattctta tcctaccagg cttcggaata 6660 atctcccata ttgtaactta ctactccgga aaaaaagaac catttggata cataggtatg 6720 gtctgagcta tgatatcaat tggcttccta gggtttatcg tgtgagcaca ccatatattt 6780 acagtaggaa tagacgtaga cacacgagca tatttcacct ccgctaccat aatcatcgct 6840 atccccaccg gcgtcaaagt atttagctga ctcgccacac tccacggaag caatatgaaa 6900 tgatctgctg cagtgctctg agccctagga ttcatttttc ttttcaccgt aggtggcctg 6960 actggcattg tattagcaaa ctcatcacta gacatcgtac tacacgacac gtactacgtt 7020 gtagctcact tccactatgt cctatcaata ggagctgtat ttgccatcat aggaggcttc 7080 attcactgat ttcccctatt ctcaggctac accctagacc aaacctacgc caaaatccat 7140 ttcgctatca tattcatcgg cgtaaatcta actttcttcc cacaacactt tctcggccta 7200 tccggaatgc cccgacgtta ctcggactac cccgatgcat acaccacatg aaatgtccta 7260 tcatctgtag gctcattcat ttctctaaca gcagtaatat taataatttt catgatttga 7320 gaagccttcg cttcgaagcg aaaagtccta atagtagaag aaccctccat aaacctggag 7380 tgactatatg gatgcccccc accctaccac acattcgaag aacccgtata cataaaatct 7440 agacaaaaaa ggaaggaatc gaacccccca aagctggttt caagccaacc ccatggcctc 7500 catgactttt tcaaaaagat attagaaaaa ccatttcata actttgtcaa agttaaatta 7560 taggctaaat cctatatatc ttaatggcac atgcagcgca agtaggtcta caagacgcta 7620 cttcccctat catagaagag cttatcacct ttcatgatca cgccctcata atcattttcc 7680 ttatctgctt cctagtcctg tatgcccttt tcctaacact cacaacaaaa ctaactaata 7740 ctaacatctc agacgctcag gaaatagaaa ccgtctgaac tatcctgccc gccatcatcc 7800 tagtcctcat cgccctccca tccctacgca tcctttacat aacagacgag gtcaacgatc 7860 cctcccttac catcaaatca attggccacc aatggtactg aacctacgag tacaccgact 7920 acggcggact aatcttcaac tcctacatac ttcccccatt attcctagaa ccaggcgacc 7980 tgcgactcct tgacgttgac aatcgagtag tactcccgat tgaagccccc attcgtataa 8040 taattacatc acaagacgtc ttgcactcat gagctgtccc cacattaggc ttaaaaacag 8100 atgcaattcc cggacgtcta aaccaaacca ctttcaccgc tacacgaccg ggggtatact 8160 acggtcaatg ctctgaaatc tgtggagcaa accacagttt catgcccatc gtcctagaac 8220 taattcccct aaaaatcttt gaaatagggc ccgtatttac cctatagcac cccctctacc 8280 ccctctagag cccactgtaa agctaactta gcattaacct tttaagttaa agattaagag 8340 aaccaacacc tctttacagt gaaatgcccc aactaaatac taccgtatgg cccaccataa 8400 ttacccccat actccttaca ctattcctca tcacccaact aaaaatatta aacacaaact 8460 accacttacc tccctcacca aagcccataa aaataaaaaa ttataacaaa ccctgagaac 8520 caaaatgaac gaaaatctgt tcgcttcatt cattgccccc acaatcctag gcctacccgc 8580 cgcagtactg atcattctat ttccccctct attgatcccc acctccaaat atctcatcaa 8640 caaccgacta attaccaccc aacaatgact aatcaaacta acctcaaaac aaatgatagc 8700 catacacaac actaaaggac gaacctgatc tcttatacta gtatccttaa tcatttttat 8760 tgccacaact aacctcctcg gactcctgcc tcactcattt acaccaacca cccaactatc 8820 tataaaccta gccatggcca tccccttatg agcgggcgca gtgattatag gctttcgctc 8880 taagattaaa aatgccctag cccacttcct accacaaggt acacctacac cccttatccc 8940 catactagtt attatcgaaa ccatcagcct actcattcaa ccaatagccc tagccgtacg 9000 cctaaccgct aacattactg caggccacct actcatgcat ctaattggaa gcgccaccct 9060 agcaatatca accattaacc ttccctctac acttatcatc ttcacaattc taattctact 9120 gactatccta gaagtcgctg tcgccttaat ccaagcctac gttttcacac ttctagtaag 9180 cctctacctg cacgacaaca cataatgacc caccaatcac atgcctatca tatagtaaaa 9240 cccagcccat gacccctaac aggggccctc tcagccctcc taatgacctc cggcctagcc 9300 atgtgatttc acttccactc cataacgctc ctcatactag gcctgctaac caacacacta 9360 accatatacc aatgatggcg cgatgtaaca cgagaaagca cataccaagg ccaccacaca 9420 ccacctgtcc aaaaaggcct tcgatacggg ataatcctat ttattacctc agaagttttt 9480 ttcttcgcag gatttttctg agccttttac cactccagcc tagcccctac cccccaacta 9540 ggagggcact ggcccccaac aggcatcacc ccgctaaatc ccctagaagt cccactccta 9600 aacacatccg tattactcgc atcaggagta tcaatcacct gagctcacca tagtctaata 9660 gaaaacaacc gaaaccaaat aattcaagca ctgcttatta caattttact gggtctctat 9720 tttaccctcc tacaagcctc agagtacttc gagtctccct tcaccatttc cgacggcatc 9780 tacggctcaa cattttttgt agccacaggc ttccatggac ttcacgtcat tattggctca 9840 actttcctca ctatctgctt catccgccaa ctaatatttc actttacatc caaacatcac 9900 tttggcttcg aagccgccgc ctgatactgg cattttgtag atgtggtttg actatttctg 9960 tatgtctcca tctattgatg agggtcttac tcttttagta taaatagtac cgttaacttc 10020 caattaacta gttttgacaa cattcaaaaa agagtaataa acttcgcctt aattttaata 10080 atcaacaccc tcctagcctt actactaata attattacat tttgactacc acaactcaac 10140 ggctacatag aaaaatccac cccttacgag tgcggcttcg accctatatc ccccgcccgc 10200 gtccctttct ccataaaatt cttcttagta gctattacct tcttattatt tgatctagaa 10260 attgccctcc ttttacccct accatgagcc ctacaaacaa ctaacctgcc actaatagtt 10320 atgtcatccc tcttattaat catcatccta gccctaagtc tggcctatga gtgactacaa 10380 aaaggattag actgagccga attggtatat agtttaaaca aaacgaatga tttcgactca 10440 ttaaattatg ataatcatat ttaccaaatg cccctcattt acataaatat tatactggca 10500 tttaccatct cacttctagg aatactagta tatcgctcac acctcatatc ctccctacta 10560 tgcctagaag gaataatact atcgctattc attatagcta ctctcataac cctcaacacc 10620 cactccctct tagccaatat tgtgcctatt gccatactag tttttgccgc ctgcgaagca 10680 gcggtaggcc tagccctact agtctcaatc tccaacacat atggcctaga ctacgtacat 10740 aacctaaacc tactccaatg ctaaaactaa tcgtcccaac aattatatta ctaccactga 10800 catgactctc caaaaaacac ataatttgaa tcaacacaac cacccacagc ctaattatta 10860 gcatcatccc cctgctattt tttaaccaaa tcaacaacaa cctatttagc tgctccctaa 10920 ccttttcctc cgaccctcta acaacccccc tcctaatact aactacctga ctcctacccc 10980 tcacaatcat ggcaagccaa cgccacttat ccagtgaacc actatcacga aaaaaactct 11040 acctctctat actaatctcc ctacaaatct ccttaattat aacattcaca gccacagaac 11100 taatcatatt ttatatcttc ttcgaaacca cacttatccc caccttggct atcatcaccc 11160 gatgaggcaa ccagccagaa cgcctgaacg caggcacata cttcctattc tacaccctag 11220 taggctccct tcccctactc atcgcactaa tttacactca caacacccta ggctcactaa 11280 acattctact acttaccctc actgcccaag aactatcaaa ctcctgagcc aacaacttaa 11340 tatgactagc ttacacaata gcttttatag taaagatacc tctttacgga ctccacttat 11400 gactccctaa agcccatgtc gaagccccca tcgctgggtc aatagtactt gccgcagtac 11460 tcttaaaact aggcggctat ggtataatac gcctcacact cattctcaac cccctgacaa 11520 aacacatagc ctaccccttc cttgtactat ccctatgagg cataattata acaagctcca 11580 tctgcctacg acaaacagac ctaaaatcgc tcattgcata ctcttcaatc agccacatag 11640 ccctcgtagt gacagccatt ctcatccaaa ccccctgaag cttcaccggc gcagtcattc 11700 tcataatcgc ccacggactt acatcctcat tactattctg cctagcaaac tcaaactacg 11760 aacgcactca cagtcgcatc ataatcctct ctcaaggact tcaaactcta ctcccactaa 11820 tagctttttg atgacttcta gcaagcctcg ctaacctcgc cttacccccc actattaacc 11880 tactgggaga actctctgtg ctagtaacca cattctcctg atcaaatatc actctcctac 11940 ttacaggact caacatacta gtcacagccc tatactccct ctacatattt accacaacac 12000 aatgaggctc actcacccac cacattaaca acataaaacc ctcattcaca cgagaaaaca 12060 ccctcatatt catacaccta tcccccattc tcctcctatc cctcaacccc gacatcatta 12120 ccgggttttc ctcttgtaaa tatagtttaa ccaaaacatc agattgtgaa tctgacaaca 12180 gaggcttacg accccttatt taccgagaaa gctcacaaga actgctaact catgccccca 12240 tgtctaacaa catggctttc tcaactttta aaggataaca gctatccatt ggtcttaggc 12300 cccaaaaatt ttggtgcaac tccaaataaa agtaataacc atgcacacta ctataaccac 12360 cctaaccctg acttccctaa ttccccccat ccttaccacc ctcgttaacc ctaacaaaaa 12420 aaactcatac ccccattatg taaaatccat tgtcgcatcc acctttatta tcagtctctt 12480 ccccacaaca atattcatgt gcctagacca agaagttatt atctcgaact gacactgagc 12540 cacaacccaa acaacccagc tctccctaag cttcaaacta gactacttct ccataatatt 12600 catccctgta gcattgttcg ttacatggtc catcatagaa ttctcactgt gatatataaa 12660 ctcagaccca aacattaatc agttcttcaa atatctactc attttcctaa ttaccatact 12720 aatcttagtt accgctaaca acctattcca actgttcatc ggctgagagg gcgtaggaat 12780 tatatccttc ttgctcatca gttgatgata cgcccgagca gatgccaaca cagcagccat 12840 tcaagcaatc ctatacaacc gtatcggcga tatcggtttc atcctcgcct tagcatgatt 12900 tatcctacac tccaactcat gagacccaca acaaatagcc cttctaaacg ctaatccaag 12960 cctcacccca ctactaggcc tcctcctagc agcagcaggc aaatcagccc aattaggcct 13020 ccacccctga ctcccctcag ccatagaagg ccccacccca gtctcagccc tactccactc 13080 aagcactata gttgtagcag gagtcttctt actcatccgc ttccaccccc tagcagaaaa 13140 tagcccacta atccaaactc taacactatg cttaggcgct atcaccactc tgttcgcagc 13200 agtctgcgcc cttacacaaa atgacatcaa aaaaatcgta gccttctcca cttcaagtca 13260 actaggactc atagtagtta caatcggcat caaccaacca cacctagcat tcctgcacat 13320 ctgtacccac gccttcttca aagccatact atttatgtgc tccgggtcca tcatccacaa 13380 ccttaacaat gaacaagata ttcgaaaaat aggaggacta ctcaaaacca tacctctcac 13440 ttcaacctcc ctcaccattg gcagcctagc attagcagga atacctttcc tcacaggttt 13500 ctattccaaa gaccacatca tcgaaaccgc aaacatatca tacacaaacg cctgagccct 13560 atctattact ctcatcgcta cctccctaac aagcgcctat agcactcgaa taattcttct 13620 caccctaaca ggtcaacctc gcttccctac ccttactaac attaacgaaa ataaccccac 13680 cctactaaac cccattaaac gcctggcagc cggaagccta ttcgcaggat ttctcattac 13740 taacaacatt tcccccgcat cccccttcca aacaacaatc cccctctacc taaaactcac 13800 agccctcgct gtcactctcc taggacttct aacagcccta gacctcaact acctaaccaa 13860 caaacttaaa ataaaatccc cactatgcac attttatttc tccaacatac tcggattcta 13920 ccctaccatc acacaccgca caatccccta tctaggcctt cttacgagcc aaaacctgcc 13980 cctactcctc ctagacctaa cctgactaga aaagctacta cctaaaacaa tttcacagca 14040 ccaaatctcc acctccatca tcacctcaac ccaaaaaggc ataattaaac tttacttcct 14100 ctctttcttc ttcccactca tcctaaccct actcctaatc acataaccta ttcccccgag 14160 caatctcaat tacaatatac acaccaacaa acaatgttca accagtaact actactaatc 14220 aacgcccata atcatacaaa gcccccgcac caataggatc ctcccgaatc aaccctgacc 14280 cctctccttc ataaattatt cagcttccta cactattaaa gtttaccaca accaccaccc 14340 catcatactc tttcacccac agcaccaacc ccacctccat cgctaacccc actaaaacac 14400 tcaccaagac ctcaacccct gacccccatg cctcaggata ctcctcaata gccatcgctg 14460 tagtatatcc aaagacaacc atcattcccc ctaaataaat taaaaaaact attaaaccca 14520 tataacctcc cccaaaattc agaataataa cacacccgac cacaccgcta acaatcaata 14580 ctaaaccccc ataaatagga gaaggcttag aagaaaaccc cacaaacccc attactaaac 14640 ccacactcaa cagaaacaaa gcatacatca ttattctcgc acggactaca accacgacca 14700 atgatatgaa aaaccatcgt tgtatttcaa ctacaagaac accaatgacc ccaatacgca 14760 aaattaaccc cctaataaaa ttaattaacc actcattcat cgacctcccc accccatcca 14820 acatctccgc atgatgaaac ttcggctcac tccttggcgc ctgcctgatc ctccaaatca 14880 ccacaggact attcctagcc atgcactact caccagacgc ctcaaccgcc ttttcatcaa 14940 tcgcccacat cactcgagac gtaaattatg gctgaatcat ccgctacctt cacgccaatg 15000 gcgcctcaat attctttatc tgcctcttcc tacacatcgg gcgaggccta tattacggat 15060 catttctcta ctcagaaacc tgaaacatcg gcattatcct cctgcttgca actatagcaa 15120 cagccttcat aggctatgtc ctcccgtgag gccaaatatc attctgaggg gccacagtaa 15180 ttacaaactt actatccgcc atcccataca ttgggacaga cctagttcaa tgaatctgag 15240 gaggctactc agtagacagt cccaccctca cacgattctt tacctttcac ttcatcttgc 15300 ccttcattat tgcagcccta gcagcactcc acctcctatt cttgcacgaa acgggatcaa 15360 acaaccccct aggaatcacc tcccattccg ataaaatcac cttccaccct tactacacaa 15420 tcaaagacgc cctcggctta cttctcttcc ttctctcctt aatgacatta acactattct 15480 caccagacct cctaggcgac ccagacaatt ataccctagc caacccctta aacacccctc 15540 cccacatcaa gcccgaatga tatttcctat tcgcctacac aattctccga tccgtcccta 15600 acaaactagg aggcgtcctt gccctattac tatccatcct catcctagca ataatcccca 15660 tcctccatat atccaaacaa caaagcataa tatttcgccc actaagccaa tcactttatt 15720 gactcctagc cgcagacctc ctcattctaa cctgaatcgg aggacaacca gtaagctacc 15780 cttttaccat cattggacaa gtagcatccg tactatactt cacaacaatc ctaatcctaa 15840 taccaactat ctccctaatt gaaaacaaaa tactcaaatg ggcctgtcct tgtagtataa 15900 actaatacac cagtcttgta aaccggagat gaaaaccttt ttccaaggac aaatcagaga 15960 aaaagtcttt aactccacca ttagcaccca aagctaagat tctaatttaa actattctct 16020 gttctttcat ggggaagcag atttgggtac cacccaagta ttgactcacc catcaacaac 16080 cgctatgtat ttcgtacatt actgccagcc accatgaata ttgtacggta ccataaatac 16140 ttgaccacct gtagtacata aaaccccaac ccacatcaaa accctccccc catgcttaca 16200 agcaagcaca gtaatcaacc ttcaactgtc acacatcaac tgcaactcca aagccacccc 16260 tcacccacta ggatatcaac aaacctacgc acccttaaca gtacatagca cataaagcca 16320 tttaccgtac atagcacatt acagtcaaat cccttctcgt ccccatggat gacccccctc 16380 agataggggt cccttgacca ccatcctccg tgaaatcaat atcccgcaca agagtgctac 16440 tctcctcgct ccgggcccat aacacttggg ggtagctaaa gtgaactgta tccgacatct 16500 ggttcctact tcagggccat aaagcctaaa tagcccacac gttcccctta aataagacat 16560 cacgatg 16567 // ID KC345804; SV 1; circular; genomic DNA; STD; HUM; 16567 BP. XX AC KC345804; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT6_169 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16567 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16567 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; 798849cbbae8aea974dc3e1ddf0d10ed. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16567 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT6_169" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="Buga" FT /db_xref="taxon:9606" FT /haplogroup="L0k" FT D-loop complement(join(16022..16567,1..575)) FT tRNA 576..646 FT /product="tRNA-Phe" FT rRNA 647..1600 FT /product="12S ribosomal RNA" FT tRNA 1601..1669 FT /product="tRNA-Val" FT rRNA 1670..3227 FT /product="16S ribosomal RNA" FT tRNA 3228..3302 FT /product="tRNA-Leu" FT gene 3305..4260 FT /gene="ND1" FT CDS 3305..4260 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4259..4260,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82407.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPITISSIPPQT" FT tRNA 4261..4329 FT /product="tRNA-Ile" FT tRNA complement(4327..4398) FT /product="tRNA-Gln" FT tRNA 4400..4467 FT /product="tRNA-Met" FT gene 4468..5509 FT /gene="ND2" FT CDS 4468..5509 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5509,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82408.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5510..5574 FT /product="tRNA-Trp" FT tRNA complement(5585..5653) FT /product="tRNA-Ala" FT tRNA complement(5655..5727) FT /product="tRNA-Asn" FT tRNA complement(5759..5824) FT /product="tRNA-Cys" FT tRNA complement(5824..5889) FT /product="tRNA-Tyr" FT gene 5902..7443 FT /gene="COX1" FT CDS 5902..7443 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B2U9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B2U9" FT /protein_id="AGD82409.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNVLSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7443..7514) FT /product="tRNA-Ser" FT tRNA 7516..7583 FT /product="tRNA-Asp" FT gene 7584..8267 FT /gene="COX2" FT CDS 7584..8267 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /protein_id="AGD82410.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8293..8362 FT /product="tRNA-Lys" FT gene 8364..8570 FT /gene="ATP8" FT CDS 8364..8570 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82411.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8525..9205 FT /gene="ATP6" FT CDS 8525..9205 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B1L8" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B1L8" FT /protein_id="AGD82412.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEVAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9205..9988 FT /gene="COX3" FT CDS 9205..9988 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9988,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82413.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9989..10056 FT /product="tRNA-Gly" FT gene 10057..10402 FT /gene="ND3" FT CDS 10057..10402 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10402,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82414.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWAE" FT tRNA 10403..10467 FT /product="tRNA-Arg" FT gene 10468..10764 FT /gene="ND4L" FT CDS 10468..10764 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AGD82415.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10758..12135 FT /gene="ND4" FT CDS 10758..12135 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12135,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9B1S7" FT /db_xref="InterPro:IPR000260" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="InterPro:IPR010227" FT /db_xref="UniProtKB/TrEMBL:Q9B1S7" FT /protein_id="AGD82416.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSLTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12136..12204 FT /product="tRNA-His" FT tRNA 12205..12263 FT /product="tRNA-Ser" FT tRNA 12264..12334 FT /product="tRNA-Leu" FT gene 12335..14146 FT /gene="ND5" FT CDS 12335..14146 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q9B1F8" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q9B1F8" FT /protein_id="AGD82417.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPASPFQTTIPLYLKLTALAVTLLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPTITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14147..14671) FT /gene="ND6" FT CDS complement(14147..14671) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82418.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14672..14740) FT /product="tRNA-Glu" FT gene 14745..15885 FT /gene="CYTB" FT CDS 14745..15885 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15885,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:L7XI03" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:L7XI03" FT /protein_id="AGD82419.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLXENKMLKWA" FT tRNA 15886..15951 FT /product="tRNA-Thr" FT tRNA complement(15953..16021) FT /product="tRNA-Pro" XX SQ Sequence 16567 BP; 5117 A; 5184 C; 2177 G; 4088 T; 1 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcgagc atacctatta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tattttcccc tcccactccc atactactaa 480 tctcatcaat acaacccccg cccatcctac ccagcacaca caccgctgct aaccccatac 540 cccgaaccaa ccaaacccca aagacacccc ccacagttta tgtagcttac ctcctcaaag 600 caatacactg aaaatgttta gacgggctca catcacccca taaacaaata ggtttggtcc 660 tagcctttct attagctctt agtaagatta cacatgcaag catccccgtt ccagtgagtt 720 caccctctaa atcaccacga tcaaaaggga caagcatcaa gcacgcaaca atgcagctca 780 aaacgcttag cctagccaca cccccacggg aaacagcagt gataaacctt tagcaataaa 840 cgaaagttca actaagctat actaacccca gggttggtca atttcgtgcc agccaccgcg 900 gtcacacgat taacccaagt caatagaagc cggcgtaaag agtgttttag atcaccccct 960 ccccaataaa gctaaaactc acctgagttg taaaaaactc cagttgacac aaaataaact 1020 acgaaagtgg ctttaacata tctgaataca caatagctaa gacccaaact gggattagat 1080 accccactat gcttagccct aaacctcaac agttaaatca acaaaactgc tcgccagaac 1140 actacgagcc acagcttaaa actcaaagga cctggcggtg cttcatatcc ctctagagga 1200 gcctgttctg taatcgataa accccgatca acctcaccac cccttgctca gcctatatac 1260 cgccatcttc agcaaaccct gatgaaggct acaaagtaag cgcaagtacc cacgtaaaga 1320 cgttaggtca aggtgtagcc catgaggtgg caagaaatgg gctacatttt ctaccccaga 1380 aaactacgat agcccttatg aaacttaagg gtcgaaggtg gatttagcag taaactgaga 1440 gtagagtgct tagttgaaca gggccctgaa gcgcgtacac accgcccgtc accctcctca 1500 agtatacttc aaaggacatt taactaaaac ccctacgcat ttatatagag gagacaagtc 1560 gtaacatggt aagtgtactg gaaagtgcac ttggacgaac cagagtgtag cttaacacaa 1620 agcacccaac ttacacttag gagatttcaa cttaacttga ccgctctgag ctaaacctag 1680 ccccaaaccc actccacctt actaccagac aaccttagcc aaaccattta cccaaataaa 1740 gtataggcga tagaaattga aacctggcgc aatagatata gtaccgcaag ggaaagatga 1800 aaaattataa ccaagcataa tatagcaagg actaacccct ataccttctg cataatgaat 1860 taactagaaa taactttgca aggagagcca aagctaagac ccccgaaacc agacgagcta 1920 cctaagaaca gctaaaagag cacacccgtc tatgtagcaa aatagtggga agatttatag 1980 gtagaggcga caaacctacc gagcctggtg atagctggtt gtccaagata gaatcttagt 2040 tcaactttaa atttgcccac agaaccctct aaatcccctt gtaaatttaa ctgttagtcc 2100 aaagaggaac agctctttgg acactaggaa aaaaccttgt agagagagta aaaaatttaa 2160 cacccatagt aggcctaaaa gcagccacca attaagaaag cgttcaagct caacacccac 2220 tacctaaaaa atcccaaaca tataactgaa ctcctcacac ccaattggac caatctatca 2280 ccctatagaa gaactaatgt tagtataagt aacatgaaaa cattctcctc cgcataagcc 2340 tgcgtcagat taaaacactg aactgacaat taacagccca atatctacaa tcaaccaaca 2400 agtcattatt accctcactg tcaacccaac acaggcatgc tcataaggaa aggttaaaaa 2460 aagtaaaagg aactcggcaa atcttacccc gcctgtttac caaaaacatc acctctagca 2520 tcaccagtat tagaggcacc gcctgcccag tgacacatgt ttaacggccg cggtacccta 2580 accgtgcaaa ggtagcataa tcacttgttc cttaaatagg gacctgtatg aatggctcca 2640 cgagggttca gctgtctctt acttttaacc agtgaaattg acctgcccgt gaagaggcgg 2700 gcatgacaca gcaagacgag aagaccctat ggagctttaa tttattaatg caaacaatac 2760 ctaacaaacc cacaggtcct aaactaccaa acctgcatta aaaatttcgg ttggggcgac 2820 ctcggagcag aaccaaacct ccgagcagta catgctaaga cttcaccagt caaagcgaac 2880 taccatactc aattgatcca ataacttgac caacggaaca agttacccta gggataacag 2940 cgcaatccta ttctagagtc catatcaaca atagggttta cgacctcgat gttggatcag 3000 gacatcccga tggtgcagcc gctattaaag gttcgtttgt tcaacgatta aagtcctacg 3060 tgatctgagt tcagaccgga gtaatccagg tcggtttcta tctacttcaa attcctccct 3120 gtacgaaagg acaagagaaa taaggcctac ttcacaaagc gccttccccc gtaaatgata 3180 tcatctcaac ttagtattat acccacaccc acccaagaac agggtttgtt aagatggcag 3240 agcccggtaa tcgcataaaa cttaaaactt tacagtcaga ggttcaattc ctcttcttaa 3300 caacataccc atggccaacc tcctactcct cattgtaccc attctaatcg caatggcatt 3360 cctaatgctt accgaacgaa aaattctagg ctatatacaa ctacgcaaag gccccaacgt 3420 tgtaggcccc tacgggctac tacaaccctt cgctgacgcc ataaaactct tcaccaaaga 3480 gcccctaaaa cccgccacat ctaccatcac cctatacatc accgccccga ccttagctct 3540 caccatcgct cttctactat gaacccccct ccccataccc aaccccctgg ttaacctcaa 3600 cctaggcctc ctatttattc tagccacctc tagcctagcc gtttactcaa tcctctgatc 3660 agggtgagca tcaaactcaa actacgccct gatcggcgca ctgcgagcag tagcccaaac 3720 aatctcatat gaagtcaccc tagccatcat tctactatca acattactaa taagtggctc 3780 ctttaacctc tccaccctta tcacaacaca agaacacctc tgattactcc tgccatcatg 3840 acccttggcc ataatatgat ttatctccac actagcagag accaaccgaa cccccttcga 3900 ccttgccgaa ggggagtccg aactagtctc aggcttcaac atcgaatacg ccgcaggccc 3960 cttcgcccta ttcttcatag ccgaatacac aaacattatt ataataaaca ccctcaccac 4020 tacaatcttc ctaggaacaa catatgacgc actctcccct gaactctaca caacatattt 4080 tgtcaccaag accctacttc tgacctccct gttcttatga attcgaacag catacccccg 4140 attccgctac gaccaactca tacacctcct atgaaaaaac ttcctaccac tcaccctagc 4200 attacttata tgatatgtct ccatacccat tacaatctcc agcattcccc ctcaaaccta 4260 agaaatatgt ctgataaaag agttactttg atagagtaaa taataggagt ttaaaccccc 4320 ttatttctag gactatgaga atcgaaccca tccctgagaa tccaaaattc tccgtgccac 4380 ctatcacacc ccatcctaaa gtaaggtcag ctaaataagc tatcgggccc ataccccgaa 4440 aatgttggtt atacccttcc cgtactaatt aatcccctgg cccaacccgt catctactct 4500 accatctttg caggcacact catcacagcg ctaagctcac actgattttt tacctgagta 4560 ggcctagaaa taaacatgct agcctttatt ccagttctaa ccaaaaaaat aaaccctcgt 4620 tccacagaag ctgccatcaa gtatttcctc acgcaagcaa ccgcatccat aatccttcta 4680 atagctatcc tcttcaacaa tatactctcc ggacaatgaa ccataaccaa tactaccaat 4740 caatactcat cattaataat cataatggct atagcaataa aactaggaat agcccccttt 4800 cacttctgag tcccagaggt tacccaaggc acccctctga catccggcct gcttcttctc 4860 acatgacaaa aactagcccc catctcaatc atataccaaa tctccccctc actaaacgta 4920 agccttctcc tcactctctc aatcttatcc atcatagcag gcagttgagg tggattaaac 4980 caaacccagc tacgcaaaat cttagcatac tcctcaatta cccacatagg atgaataata 5040 gcagttctac cgtacaaccc taacataacc attcttaatt taactattta tattatccta 5100 actactaccg cattcctact actcaactta aactccagca ccacgaccct actactatct 5160 cgcacctgaa acaagctaac atgactaaca cccttaattc catccaccct cctctcccta 5220 ggaggcctgc ccccgctaac cggctttttg cccaaatggg ccattatcga agaattcaca 5280 aaaaacaata gcctcatcat ccccaccatc atagccacca tcaccctcct taacctctac 5340 ttctacctac gcctaatcta ctccacctca atcacactac tccccatatc taacaacgta 5400 aaaataaaat gacagtttga acatacaaaa cccaccccac tcctccccac actcatcgcc 5460 cttaccacgc tactcctacc tatctcccct tttatactaa taatcttata gaaatttagg 5520 ttaaatacag accaagagcc ttcaaagccc tcagtaagtt gcaatactta atttctgtaa 5580 cagctaagga ctgcaaaacc ccactctgca tcaactgaac gcaaatcagc cactttaatt 5640 aagctaagcc cttactagac caatgggact taaacccaca aacacttagt taacagctaa 5700 gcaccctaat caactggctt caatctactt ctcccgccgc cgggaaaaaa ggcgggagaa 5760 gccccggcag gtttgaagct gcttcttcga atttgcaatt caatatgaga atcacctcgg 5820 agctggtaaa aagaggccta acccctgtct ttagatttac agtccaatgc ttcactcagc 5880 cattttacct cacccccact gatgttcgcc gaccgttgac tattctctac aaaccacaaa 5940 gacattggaa cactatacct attattcggc gcatgagctg gagtcctagg cacagctcta 6000 agcctcctta ttcgagccga gctgggccag ccaggcaacc ttctaggtaa cgaccacatc 6060 tacaacgtta tcgtcacagc ccatgcattt gtaataatct tcttcatagt aatacccatc 6120 ataatcggag gctttggcaa ctgactagtt cccctaataa tcggtgcccc cgatatggcg 6180 ttcccccgca taaacaacat aagcttctga ctcttacctc cctctctcct actcctgctc 6240 gcatctgcta tagtggaggc cggagcagga acaggttgaa cagtctaccc tcccttagca 6300 gggaactact cccaccctgg agcctccgta gacctaacca tcttctcctt acacctagca 6360 ggtgtctcct ctatcttagg ggccatcaat ttcatcacaa caattatcaa tataaaaccc 6420 cctgccataa cccaatacca aacgcccctc ttcgtctgat ccgtcctaat cacagcagtc 6480 ctacttctcc tatctctccc agtcctagct gctggcatca ctatactact aacagaccgc 6540 aacctcaaca ccaccttctt cgaccccgcc ggaggaggag accccattct ataccaacac 6600 ctattctgat ttttcggtca ccctgaagtt tatattctta tcctaccagg cttcggaata 6660 atctcccata ttgtaactta ctactccgga aaaaaagaac catttggata cataggtatg 6720 gtctgagcta tgatatcaat tggcttccta gggtttatcg tgtgagcaca ccatatattt 6780 acagtaggaa tagacgtaga cacacgagca tatttcacct ccgctaccat aatcatcgct 6840 atccccaccg gcgtcaaagt atttagctga ctcgccacac tccacggaag caatatgaaa 6900 tgatctgctg cagtgctctg agccctagga ttcatttttc ttttcaccgt aggtggcctg 6960 actggcattg tattagcaaa ctcatcacta gacatcgtac tacacgacac gtactacgtt 7020 gtagctcact tccactatgt cctatcaata ggagctgtat ttgccatcat aggaggcttc 7080 attcactgat ttcccctatt ctcaggctac accctagacc aaacctacgc caaaatccat 7140 ttcgctatca tattcatcgg cgtaaatcta actttcttcc cacaacactt tctcggccta 7200 tccggaatgc cccgacgtta ctcggactac cccgatgcat acaccacatg aaatgtccta 7260 tcatctgtag gctcattcat ttctctaaca gcagtaatat taataatttt catgatttga 7320 gaagccttcg cttcgaagcg aaaagtccta atagtagaag aaccctccat aaacctggag 7380 tgactatatg gatgcccccc accctaccac acattcgaag aacccgtata cataaaatct 7440 agacaaaaaa ggaaggaatc gaacccccca aagctggttt caagccaacc ccatggcctc 7500 catgactttt tcaaaaagat attagaaaaa ccatttcata actttgtcaa agttaaatta 7560 taggctaaat cctatatatc ttaatggcac atgcagcgca agtaggtcta caagacgcta 7620 cttcccctat catagaagag cttatcacct ttcatgatca cgccctcata atcattttcc 7680 ttatctgctt cctagtcctg tatgcccttt tcctaacact cacaacaaaa ctaactaata 7740 ctaacatctc agacgctcag gaaatagaaa ccgtctgaac tatcctgccc gccatcatcc 7800 tagtcctcat cgccctccca tccctacgca tcctttacat aacagacgag gtcaacgatc 7860 cctcccttac catcaaatca attggccacc aatggtactg aacctacgag tacaccgact 7920 acggcggact aatcttcaac tcctacatac ttcccccatt attcctagaa ccaggcgacc 7980 tgcgactcct tgacgttgac aatcgagtag tactcccgat tgaagccccc attcgtataa 8040 taattacatc acaagacgtc ttgcactcat gagctgtccc cacattaggc ttaaaaacag 8100 atgcaattcc cggacgtcta aaccaaacca ctttcaccgc tacacgaccg ggggtatact 8160 acggtcaatg ctctgaaatc tgtggagcaa accacagttt catgcccatc gtcctagaac 8220 taattcccct aaaaatcttt gaaatagggc ccgtatttac cctatagcac cccctctacc 8280 ccctctagag cccactgtaa agctaactta gcattaacct tttaagttaa agattaagag 8340 aaccaacacc tctttacagt gaaatgcccc aactaaatac taccgtatgg cccaccataa 8400 ttacccccat actccttaca ctattcctca tcacccaact aaaaatatta aacacaaact 8460 accacttacc tccctcacca aagcccataa aaataaaaaa ttataacaaa ccctgagaac 8520 caaaatgaac gaaaatctgt tcgcttcatt cattgccccc acaatcctag gcctacccgc 8580 cgcagtactg atcattctat ttccccctct attgatcccc acctccaaat atctcatcaa 8640 caaccgacta attaccaccc aacaatgact aatcaaacta acctcaaaac aaatgatagc 8700 catacacaac actaaaggac gaacctgatc tcttatacta gtatccttaa tcatttttat 8760 tgccacaact aacctcctcg gactcctgcc tcactcattt acaccaacca cccaactatc 8820 tataaaccta gccatggcca tccccttatg agcgggcgca gtgattatag gctttcgctc 8880 taagattaaa aatgccctag cccacttcct accacaaggt acacctacac cccttatccc 8940 catactagtt attatcgaaa ccatcagcct actcattcaa ccaatagccc tagccgtacg 9000 cctaaccgct aacattactg caggccacct actcatgcat ctaattggaa gcgccaccct 9060 agcaatatca accattaacc ttccctctac acttatcatc ttcacaattc taattctact 9120 gactatccta gaagtcgctg tcgccttaat ccaagcctac gttttcacac ttctagtaag 9180 cctctacctg cacgacaaca cataatgacc caccaatcac atgcctatca tatagtaaaa 9240 cccagcccat gacccctaac aggggccctc tcagccctcc taatgacctc cggcctagcc 9300 atgtgatttc acttccactc cataacgctc ctcatactag gcctgctaac caacacacta 9360 accatatacc aatgatggcg cgatgtaaca cgagaaagca cataccaagg ccaccacaca 9420 ccacctgtcc aaaaaggcct tcgatacggg ataatcctat ttattacctc agaagttttt 9480 ttcttcgcag gatttttctg agccttttac cactccagcc tagcccctac cccccaacta 9540 ggagggcact ggcccccaac aggcatcacc ccgctaaatc ccctagaagt cccactccta 9600 aacacatccg tattactcgc atcaggagta tcaatcacct gagctcacca tagtctaata 9660 gaaaacaacc gaaaccaaat aattcaagca ctgcttatta caattttact gggtctctat 9720 tttaccctcc tacaagcctc agagtacttc gagtctccct tcaccatttc cgacggcatc 9780 tacggctcaa cattttttgt agccacaggc ttccatggac ttcacgtcat tattggctca 9840 actttcctca ctatctgctt catccgccaa ctaatatttc actttacatc caaacatcac 9900 tttggcttcg aagccgccgc ctgatactgg cattttgtag atgtggtttg actatttctg 9960 tatgtctcca tctattgatg agggtcttac tcttttagta taaatagtac cgttaacttc 10020 caattaacta gttttgacaa cattcaaaaa agagtaataa acttcgcctt aattttaata 10080 atcaacaccc tcctagcctt actactaata attattacat tttgactacc acaactcaac 10140 ggctacatag aaaaatccac cccttacgag tgcggcttcg accctatatc ccccgcccgc 10200 gtccctttct ccataaaatt cttcttagta gctattacct tcttattatt tgatctagaa 10260 attgccctcc ttttacccct accatgagcc ctacaaacaa ctaacctgcc actaatagtt 10320 atgtcatccc tcttattaat catcatccta gccctaagtc tggcctatga gtgactacaa 10380 aaaggattag actgagccga attggtatat agtttaaaca aaacgaatga tttcgactca 10440 ttaaattatg ataatcatat ttaccaaatg cccctcattt acataaatat tatactggca 10500 tttaccatct cacttctagg aatactagta tatcgctcac acctcatatc ctccctacta 10560 tgcctagaag gaataatact atcgctattc attatagcta ctctcataac cctcaacacc 10620 cactccctct tagccaatat tgtgcctatt gccatactag tttttgccgc ctgcgaagca 10680 gcggtaggcc tagccctact agtctcaatc tccaacacat atggcctaga ctacgtacat 10740 aacctaaacc tactccaatg ctaaaactaa tcgtcccaac aattatatta ctaccactga 10800 catgactctc caaaaaacac ataatttgaa tcaacacaac cacccacagc ctaattatta 10860 gcatcatccc cctgctattt tttaaccaaa tcaacaacaa cctatttagc tgctccctaa 10920 ccttttcctc cgaccctcta acaacccccc tcctaatact aactacctga ctcctacccc 10980 tcacaatcat ggcaagccaa cgccacttat ccagtgaacc actatcacga aaaaaactct 11040 acctctctat actaatctcc ctacaaatct ccttaattat aacattcaca gccacagaac 11100 taatcatatt ttatatcttc ttcgaaacca cacttatccc caccttggct atcatcaccc 11160 gatgaggcaa ccagccagaa cgcctgaacg caggcacata cttcctattc tacaccctag 11220 taggctccct tcccctactc atcgcactaa tttacactca caacacccta ggctcactaa 11280 acattctact acttaccctc actgcccaag aactatcaaa ctcctgagcc aacaacttaa 11340 tatgactagc ttacacaata gcttttatag taaagatacc tctttacgga ctccacttat 11400 gactccctaa agcccatgtc gaagccccca tcgctgggtc aatagtactt gccgcagtac 11460 tcttaaaact aggcggctat ggtataatac gcctcacact cattctcaac cccctgacaa 11520 aacacatagc ctaccccttc cttgtactat ccctatgagg cataattata acaagctcca 11580 tctgcctacg acaaacagac ctaaaatcgc tcattgcata ctcttcaatc agccacatag 11640 ccctcgtagt gacagccatt ctcatccaaa ccccctgaag cttcaccggc gcagtcattc 11700 tcataatcgc ccacggactt acatcctcat tactattctg cctagcaaac tcaaactacg 11760 aacgcactca cagtcgcatc ataatcctct ctcaaggact tcaaactcta ctcccactaa 11820 tagctttttg atgacttcta gcaagcctcg ctaacctcgc cttacccccc actattaacc 11880 tactgggaga actctctgtg ctagtaacca cattctcctg atcaaatatc actctcctac 11940 ttacaggact caacatacta gtcacagccc tatactccct ctacatattt accacaacac 12000 aatgaggctc actcacccac cacattaaca acataaaacc ctcattcaca cgagaaaaca 12060 ccctcatatt catacaccta tcccccattc tcctcctatc cctcaacccc gacatcatta 12120 ccgggttttc ctcttgtaaa tatagtttaa ccaaaacatc agattgtgaa tctgacaaca 12180 gaggcttacg accccttatt taccgagaaa gctcacaaga actgctaact catgccccca 12240 tgtctaacaa catggctttc tcaactttta aaggataaca gctatccatt ggtcttaggc 12300 cccaaaaatt ttggtgcaac tccaaataaa agtaataacc atgcacacta ctataaccac 12360 cctaaccctg acttccctaa ttccccccat ccttaccacc ctcgttaacc ctaacaaaaa 12420 aaactcatac ccccattatg taaaatccat tgtcgcatcc acctttatta tcagtctctt 12480 ccccacaaca atattcatgt gcctagacca agaagttatt atctcgaact gacactgagc 12540 cacaacccaa acaacccagc tctccctaag cttcaaacta gactacttct ccataatatt 12600 catccctgta gcattgttcg ttacatggtc catcatagaa ttctcactgt gatatataaa 12660 ctcagaccca aacattaatc agttcttcaa atatctactc attttcctaa ttaccatact 12720 aatcttagtt accgctaaca acctattcca actgttcatc ggctgagagg gcgtaggaat 12780 tatatccttc ttgctcatca gttgatgata cgcccgagca gatgccaaca cagcagccat 12840 tcaagcaatc ctatacaacc gtatcggcga tatcggtttc atcctcgcct tagcatgatt 12900 tatcctacac tccaactcat gagacccaca acaaatagcc cttctaaacg ctaatccaag 12960 cctcacccca ctactaggcc tcctcctagc agcagcaggc aaatcagccc aattaggcct 13020 ccacccctga ctcccctcag ccatagaagg ccccacccca gtctcagccc tactccactc 13080 aagcactata gttgtagcag gagtcttctt actcatccgc ttccaccccc tagcagaaaa 13140 tagcccacta atccaaactc taacactatg cttaggcgct atcaccactc tgttcgcagc 13200 agtctgcgcc cttacacaaa atgacatcaa aaaaatcgta gccttctcca cttcaagtca 13260 actaggactc atagtagtta caatcggcat caaccaacca cacctagcat tcctgcacat 13320 ctgtacccac gccttcttca aagccatact atttatgtgc tccgggtcca tcatccacaa 13380 ccttaacaat gaacaagata ttcgaaaaat aggaggacta ctcaaaacca tacctctcac 13440 ttcaacctcc ctcaccattg gcagcctagc attagcagga atacctttcc tcacaggttt 13500 ctattccaaa gaccacatca tcgaaaccgc aaacatatca tacacaaacg cctgagccct 13560 atctattact ctcatcgcta cctccctaac aagcgcctat agcactcgaa taattcttct 13620 caccctaaca ggtcaacctc gcttccctac ccttactaac attaacgaaa ataaccccac 13680 cctactaaac cccattaaac gcctggcagc cggaagccta ttcgcaggat ttctcattac 13740 taacaacatt tcccccgcat cccccttcca aacaacaatc cccctctacc taaaactcac 13800 agccctcgct gtcactctcc taggacttct aacagcccta gacctcaact acctaaccaa 13860 caaacttaaa ataaaatccc cactatgcac attttatttc tccaacatac tcggattcta 13920 ccctaccatc acacaccgca caatccccta tctaggcctt cttacgagcc aaaacctgcc 13980 cctactcctc ctagacctaa cctgactaga aaagctacta cctaaaacaa tttcacagca 14040 ccaaatctcc acctccatca tcacctcaac ccaaaaaggc ataattaaac tttacttcct 14100 ctctttcttc ttcccactca tcctaaccct actcctaatc acataaccta ttcccccgag 14160 caatctcaat tacaatatac acaccaacaa acaatgttca accagtaact actactaatc 14220 aacgcccata atcatacaaa gcccccgcac caataggatc ctcccgaatc aaccctgacc 14280 cctctccttc ataaattatt cagcttccta cactattaaa gtttaccaca accaccaccc 14340 catcatactc tttcacccac agcaccaacc ccacctccat cgctaacccc actaaaacac 14400 tcaccaagac ctcaacccct gacccccatg cctcaggata ctcctcaata gccatcgctg 14460 tagtatatcc aaagacaacc atcattcccc ctaaataaat taaaaaaact attaaaccca 14520 tataacctcc cccaaaattc agaataataa cacacccgac cacaccgcta acaatcaata 14580 ctaaaccccc ataaatagga gaaggcttag aagaaaaccc cacaaacccc attactaaac 14640 ccacactcaa cagaaacaaa gcatacatca ttattctcgc acggactaca accacgacca 14700 atgatatgaa aaaccatcgt tgtatttcaa ctacaagaac accaatgacc ccaatacgca 14760 aaattaaccc cctaataaaa ttaattaacc actcattcat cgacctcccc accccatcca 14820 acatctccgc atgatgaaac ttcggctcac tccttggcgc ctgcctgatc ctccaaatca 14880 ccacaggact attcctagcc atgcactact caccagacgc ctcaaccgcc ttttcatcaa 14940 tcgcccacat cactcgagac gtaaattatg gctgaatcat ccgctacctt cacgccaatg 15000 gcgcctcaat attctttatc tgcctcttcc tacacatcgg gcgaggccta tattacggat 15060 catttctcta ctcagaaacc tgaaacatcg gcattatcct cctgcttgca actatagcaa 15120 cagccttcat aggctatgtc ctcccgtgag gccaaatatc attctgaggg gccacagtaa 15180 ttacaaactt actatccgcc atcccataca ttgggacaga cctagttcaa tgaatctgag 15240 gaggctactc agtagacagt cccaccctca cacgattctt tacctttcac ttcatcttgc 15300 ccttcattat tgcagcccta gcagcactcc acctcctatt cttgcacgaa acgggatcaa 15360 acaaccccct aggaatcacc tcccattccg ataaaatcac cttccaccct tactacacaa 15420 tcaaagacgc cctcggctta cttctcttcc ttctctcctt aatgacatta acactattct 15480 caccagacct cctaggcgac ccagacaatt ataccctagc caacccctta aacacccctc 15540 cccacatcaa gcccgaatga tatttcctat tcgcctacac aattctccga tccgtcccta 15600 acaaactagg aggcgtcctt gccctattac tatccatcct catcctagca ataatcccca 15660 tcctccatat atccaaacaa caaagcataa tatttcgccc actaagccaa tcactttatt 15720 gactcctagc cgcagacctc ctcattctaa cctgaatcgg aggacaacca gtaagctacc 15780 cttttaccat cattggacaa gtagcatccg tactatactt cacaacaatc ctaatcctaa 15840 taccaactat ctccctaatn gaaaacaaaa tactcaaatg ggcctgtcct tgtagtataa 15900 actaatacac cagtcttgta aaccggagat gaaaaccttt ttccaaggac aaatcagaga 15960 aaaagtcttt aactccacca ttagcaccca aagctaagat tctaatttaa actattctct 16020 gttctttcat ggggaagcag atttgggtac cacccaagta ttgactcacc catcaacaac 16080 cgctatgtat ttcgtacatt actgccagcc accatgaata ttgtacggta ccataaatac 16140 ttgaccacct gtagtacata aaaccccaac ccacatcaaa accctccccc catgcttaca 16200 agcaagcaca gtaatcaacc ttcaactgtc acacatcaac tgcaactcca aagccacccc 16260 tcacccacta ggatatcaac aaacctacgc acccttaaca gtacatagca cataaagcca 16320 tttaccgtac atagcacatt acagtcaaat cccttctcgt ccccatggat gacccccctc 16380 agataggggt cccttgacca ccatcctccg tgaaatcaat atcccgcaca agagtgctac 16440 tctcctcgct ccgggcccat aacacttggg ggtagctaaa gtgaactgta tccgacatct 16500 ggttcctact tcagggccat aaagcctaaa tagcccacac gttcccctta aataagacat 16560 cacgatg 16567 // ID KC345805; SV 1; circular; genomic DNA; STD; HUM; 16567 BP. XX AC KC345805; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT6_173 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16567 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16567 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; b6dcc73fb91087dd82a9d3d817ce7501. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16567 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT6_173" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="Buga" FT /db_xref="taxon:9606" FT /haplogroup="L0k" FT D-loop complement(join(16022..16567,1..575)) FT tRNA 576..646 FT /product="tRNA-Phe" FT rRNA 647..1600 FT /product="12S ribosomal RNA" FT tRNA 1601..1669 FT /product="tRNA-Val" FT rRNA 1670..3227 FT /product="16S ribosomal RNA" FT tRNA 3228..3302 FT /product="tRNA-Leu" FT gene 3305..4260 FT /gene="ND1" FT CDS 3305..4260 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4259..4260,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82420.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPITISSIPPQT" FT tRNA 4261..4329 FT /product="tRNA-Ile" FT tRNA complement(4327..4398) FT /product="tRNA-Gln" FT tRNA 4400..4467 FT /product="tRNA-Met" FT gene 4468..5509 FT /gene="ND2" FT CDS 4468..5509 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5509,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82421.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5510..5574 FT /product="tRNA-Trp" FT tRNA complement(5585..5653) FT /product="tRNA-Ala" FT tRNA complement(5655..5727) FT /product="tRNA-Asn" FT tRNA complement(5759..5824) FT /product="tRNA-Cys" FT tRNA complement(5824..5889) FT /product="tRNA-Tyr" FT gene 5902..7443 FT /gene="COX1" FT CDS 5902..7443 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B2U9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B2U9" FT /protein_id="AGD82422.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNVLSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7443..7514) FT /product="tRNA-Ser" FT tRNA 7516..7583 FT /product="tRNA-Asp" FT gene 7584..8267 FT /gene="COX2" FT CDS 7584..8267 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /protein_id="AGD82423.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8293..8362 FT /product="tRNA-Lys" FT gene 8364..8570 FT /gene="ATP8" FT CDS 8364..8570 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82424.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8525..9205 FT /gene="ATP6" FT CDS 8525..9205 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B1L8" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B1L8" FT /protein_id="AGD82425.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEVAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9205..9988 FT /gene="COX3" FT CDS 9205..9988 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9988,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82426.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9989..10056 FT /product="tRNA-Gly" FT gene 10057..10402 FT /gene="ND3" FT CDS 10057..10402 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10402,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82427.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWAE" FT tRNA 10403..10467 FT /product="tRNA-Arg" FT gene 10468..10764 FT /gene="ND4L" FT CDS 10468..10764 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AGD82428.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10758..12135 FT /gene="ND4" FT CDS 10758..12135 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12135,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9B1S7" FT /db_xref="InterPro:IPR000260" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="InterPro:IPR010227" FT /db_xref="UniProtKB/TrEMBL:Q9B1S7" FT /protein_id="AGD82429.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSLTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12136..12204 FT /product="tRNA-His" FT tRNA 12205..12263 FT /product="tRNA-Ser" FT tRNA 12264..12334 FT /product="tRNA-Leu" FT gene 12335..14146 FT /gene="ND5" FT CDS 12335..14146 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q9B1F8" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q9B1F8" FT /protein_id="AGD82430.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPASPFQTTIPLYLKLTALAVTLLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPTITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14147..14671) FT /gene="ND6" FT CDS complement(14147..14671) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82431.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14672..14740) FT /product="tRNA-Glu" FT gene 14745..15885 FT /gene="CYTB" FT CDS 14745..15885 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15885,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q6VJ80" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q6VJ80" FT /protein_id="AGD82432.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15886..15951 FT /product="tRNA-Thr" FT tRNA complement(15953..16021) FT /product="tRNA-Pro" XX SQ Sequence 16567 BP; 5117 A; 5184 C; 2177 G; 4089 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcgagc atacctatta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tattttcccc tcccactccc atactactaa 480 tctcatcaat acaacccccg cccatcctac ccagcacaca caccgctgct aaccccatac 540 cccgaaccaa ccaaacccca aagacacccc ccacagttta tgtagcttac ctcctcaaag 600 caatacactg aaaatgttta gacgggctca catcacccca taaacaaata ggtttggtcc 660 tagcctttct attagctctt agtaagatta cacatgcaag catccccgtt ccagtgagtt 720 caccctctaa atcaccacga tcaaaaggga caagcatcaa gcacgcaaca atgcagctca 780 aaacgcttag cctagccaca cccccacggg aaacagcagt gataaacctt tagcaataaa 840 cgaaagttca actaagctat actaacccca gggttggtca atttcgtgcc agccaccgcg 900 gtcacacgat taacccaagt caatagaagc cggcgtaaag agtgttttag atcaccccct 960 ccccaataaa gctaaaactc acctgagttg taaaaaactc cagttgacac aaaataaact 1020 acgaaagtgg ctttaacata tctgaataca caatagctaa gacccaaact gggattagat 1080 accccactat gcttagccct aaacctcaac agttaaatca acaaaactgc tcgccagaac 1140 actacgagcc acagcttaaa actcaaagga cctggcggtg cttcatatcc ctctagagga 1200 gcctgttctg taatcgataa accccgatca acctcaccac cccttgctca gcctatatac 1260 cgccatcttc agcaaaccct gatgaaggct acaaagtaag cgcaagtacc cacgtaaaga 1320 cgttaggtca aggtgtagcc catgaggtgg caagaaatgg gctacatttt ctaccccaga 1380 aaactacgat agcccttatg aaacttaagg gtcgaaggtg gatttagcag taaactgaga 1440 gtagagtgct tagttgaaca gggccctgaa gcgcgtacac accgcccgtc accctcctca 1500 agtatacttc aaaggacatt taactaaaac ccctacgcat ttatatagag gagacaagtc 1560 gtaacatggt aagtgtactg gaaagtgcac ttggacgaac cagagtgtag cttaacacaa 1620 agcacccaac ttacacttag gagatttcaa cttaacttga ccgctctgag ctaaacctag 1680 ccccaaaccc actccacctt actaccagac aaccttagcc aaaccattta cccaaataaa 1740 gtataggcga tagaaattga aacctggcgc aatagatata gtaccgcaag ggaaagatga 1800 aaaattataa ccaagcataa tatagcaagg actaacccct ataccttctg cataatgaat 1860 taactagaaa taactttgca aggagagcca aagctaagac ccccgaaacc agacgagcta 1920 cctaagaaca gctaaaagag cacacccgtc tatgtagcaa aatagtggga agatttatag 1980 gtagaggcga caaacctacc gagcctggtg atagctggtt gtccaagata gaatcttagt 2040 tcaactttaa atttgcccac agaaccctct aaatcccctt gtaaatttaa ctgttagtcc 2100 aaagaggaac agctctttgg acactaggaa aaaaccttgt agagagagta aaaaatttaa 2160 cacccatagt aggcctaaaa gcagccacca attaagaaag cgttcaagct caacacccac 2220 tacctaaaaa atcccaaaca tataactgaa ctcctcacac ccaattggac caatctatca 2280 ccctatagaa gaactaatgt tagtataagt aacatgaaaa cattctcctc cgcataagcc 2340 tgcgtcagat taaaacactg aactgacaat taacagccca atatctacaa tcaaccaaca 2400 agtcattatt accctcactg tcaacccaac acaggcatgc tcataaggaa aggttaaaaa 2460 aagtaaaagg aactcggcaa atcttacccc gcctgtttac caaaaacatc acctctagca 2520 tcaccagtat tagaggcacc gcctgcccag tgacacatgt ttaacggccg cggtacccta 2580 accgtgcaaa ggtagcataa tcacttgttc cttaaatagg gacctgtatg aatggctcca 2640 cgagggttca gctgtctctt acttttaacc agtgaaattg acctgcccgt gaagaggcgg 2700 gcatgacaca gcaagacgag aagaccctat ggagctttaa tttattaatg caaacaatac 2760 ctaacaaacc cacaggtcct aaactaccaa acctgcatta aaaatttcgg ttggggcgac 2820 ctcggagcag aaccaaacct ccgagcagta catgctaaga cttcaccagt caaagcgaac 2880 taccatactc aattgatcca ataacttgac caacggaaca agttacccta gggataacag 2940 cgcaatccta ttctagagtc catatcaaca atagggttta cgacctcgat gttggatcag 3000 gacatcccga tggtgcagcc gctattaaag gttcgtttgt tcaacgatta aagtcctacg 3060 tgatctgagt tcagaccgga gtaatccagg tcggtttcta tctacttcaa attcctccct 3120 gtacgaaagg acaagagaaa taaggcctac ttcacaaagc gccttccccc gtaaatgata 3180 tcatctcaac ttagtattat acccacaccc acccaagaac agggtttgtt aagatggcag 3240 agcccggtaa tcgcataaaa cttaaaactt tacagtcaga ggttcaattc ctcttcttaa 3300 caacataccc atggccaacc tcctactcct cattgtaccc attctaatcg caatggcatt 3360 cctaatgctt accgaacgaa aaattctagg ctatatacaa ctacgcaaag gccccaacgt 3420 tgtaggcccc tacgggctac tacaaccctt cgctgacgcc ataaaactct tcaccaaaga 3480 gcccctaaaa cccgccacat ctaccatcac cctatacatc accgccccga ccttagctct 3540 caccatcgct cttctactat gaacccccct ccccataccc aaccccctgg ttaacctcaa 3600 cctaggcctc ctatttattc tagccacctc tagcctagcc gtttactcaa tcctctgatc 3660 agggtgagca tcaaactcaa actacgccct gatcggcgca ctgcgagcag tagcccaaac 3720 aatctcatat gaagtcaccc tagccatcat tctactatca acattactaa taagtggctc 3780 ctttaacctc tccaccctta tcacaacaca agaacacctc tgattactcc tgccatcatg 3840 acccttggcc ataatatgat ttatctccac actagcagag accaaccgaa cccccttcga 3900 ccttgccgaa ggggagtccg aactagtctc aggcttcaac atcgaatacg ccgcaggccc 3960 cttcgcccta ttcttcatag ccgaatacac aaacattatt ataataaaca ccctcaccac 4020 tacaatcttc ctaggaacaa catatgacgc actctcccct gaactctaca caacatattt 4080 tgtcaccaag accctacttc tgacctccct gttcttatga attcgaacag catacccccg 4140 attccgctac gaccaactca tacacctcct atgaaaaaac ttcctaccac tcaccctagc 4200 attacttata tgatatgtct ccatacccat tacaatctcc agcattcccc ctcaaaccta 4260 agaaatatgt ctgataaaag agttactttg atagagtaaa taataggagt ttaaaccccc 4320 ttatttctag gactatgaga atcgaaccca tccctgagaa tccaaaattc tccgtgccac 4380 ctatcacacc ccatcctaaa gtaaggtcag ctaaataagc tatcgggccc ataccccgaa 4440 aatgttggtt atacccttcc cgtactaatt aatcccctgg cccaacccgt catctactct 4500 accatctttg caggcacact catcacagcg ctaagctcac actgattttt tacctgagta 4560 ggcctagaaa taaacatgct agcctttatt ccagttctaa ccaaaaaaat aaaccctcgt 4620 tccacagaag ctgccatcaa gtatttcctc acgcaagcaa ccgcatccat aatccttcta 4680 atagctatcc tcttcaacaa tatactctcc ggacaatgaa ccataaccaa tactaccaat 4740 caatactcat cattaataat cataatggct atagcaataa aactaggaat agcccccttt 4800 cacttctgag tcccagaggt tacccaaggc acccctctga catccggcct gcttcttctc 4860 acatgacaaa aactagcccc catctcaatc atataccaaa tctccccctc actaaacgta 4920 agccttctcc tcactctctc aatcttatcc atcatagcag gcagttgagg tggattaaac 4980 caaacccagc tacgcaaaat cttagcatac tcctcaatta cccacatagg atgaataata 5040 gcagttctac cgtacaaccc taacataacc attcttaatt taactattta tattatccta 5100 actactaccg cattcctact actcaactta aactccagca ccacgaccct actactatct 5160 cgcacctgaa acaagctaac atgactaaca cccttaattc catccaccct cctctcccta 5220 ggaggcctgc ccccgctaac cggctttttg cccaaatggg ccattatcga agaattcaca 5280 aaaaacaata gcctcatcat ccccaccatc atagccacca tcaccctcct taacctctac 5340 ttctacctac gcctaatcta ctccacctca atcacactac tccccatatc taacaacgta 5400 aaaataaaat gacagtttga acatacaaaa cccaccccac tcctccccac actcatcgcc 5460 cttaccacgc tactcctacc tatctcccct tttatactaa taatcttata gaaatttagg 5520 ttaaatacag accaagagcc ttcaaagccc tcagtaagtt gcaatactta atttctgtaa 5580 cagctaagga ctgcaaaacc ccactctgca tcaactgaac gcaaatcagc cactttaatt 5640 aagctaagcc cttactagac caatgggact taaacccaca aacacttagt taacagctaa 5700 gcaccctaat caactggctt caatctactt ctcccgccgc cgggaaaaaa ggcgggagaa 5760 gccccggcag gtttgaagct gcttcttcga atttgcaatt caatatgaga atcacctcgg 5820 agctggtaaa aagaggccta acccctgtct ttagatttac agtccaatgc ttcactcagc 5880 cattttacct cacccccact gatgttcgcc gaccgttgac tattctctac aaaccacaaa 5940 gacattggaa cactatacct attattcggc gcatgagctg gagtcctagg cacagctcta 6000 agcctcctta ttcgagccga gctgggccag ccaggcaacc ttctaggtaa cgaccacatc 6060 tacaacgtta tcgtcacagc ccatgcattt gtaataatct tcttcatagt aatacccatc 6120 ataatcggag gctttggcaa ctgactagtt cccctaataa tcggtgcccc cgatatggcg 6180 ttcccccgca taaacaacat aagcttctga ctcttacctc cctctctcct actcctgctc 6240 gcatctgcta tagtggaggc cggagcagga acaggttgaa cagtctaccc tcccttagca 6300 gggaactact cccaccctgg agcctccgta gacctaacca tcttctcctt acacctagca 6360 ggtgtctcct ctatcttagg ggccatcaat ttcatcacaa caattatcaa tataaaaccc 6420 cctgccataa cccaatacca aacgcccctc ttcgtctgat ccgtcctaat cacagcagtc 6480 ctacttctcc tatctctccc agtcctagct gctggcatca ctatactact aacagaccgc 6540 aacctcaaca ccaccttctt cgaccccgcc ggaggaggag accccattct ataccaacac 6600 ctattctgat ttttcggtca ccctgaagtt tatattctta tcctaccagg cttcggaata 6660 atctcccata ttgtaactta ctactccgga aaaaaagaac catttggata cataggtatg 6720 gtctgagcta tgatatcaat tggcttccta gggtttatcg tgtgagcaca ccatatattt 6780 acagtaggaa tagacgtaga cacacgagca tatttcacct ccgctaccat aatcatcgct 6840 atccccaccg gcgtcaaagt atttagctga ctcgccacac tccacggaag caatatgaaa 6900 tgatctgctg cagtgctctg agccctagga ttcatttttc ttttcaccgt aggtggcctg 6960 actggcattg tattagcaaa ctcatcacta gacatcgtac tacacgacac gtactacgtt 7020 gtagctcact tccactatgt cctatcaata ggagctgtat ttgccatcat aggaggcttc 7080 attcactgat ttcccctatt ctcaggctac accctagacc aaacctacgc caaaatccat 7140 ttcgctatca tattcatcgg cgtaaatcta actttcttcc cacaacactt tctcggccta 7200 tccggaatgc cccgacgtta ctcggactac cccgatgcat acaccacatg aaatgtccta 7260 tcatctgtag gctcattcat ttctctaaca gcagtaatat taataatttt catgatttga 7320 gaagccttcg cttcgaagcg aaaagtccta atagtagaag aaccctccat aaacctggag 7380 tgactatatg gatgcccccc accctaccac acattcgaag aacccgtata cataaaatct 7440 agacaaaaaa ggaaggaatc gaacccccca aagctggttt caagccaacc ccatggcctc 7500 catgactttt tcaaaaagat attagaaaaa ccatttcata actttgtcaa agttaaatta 7560 taggctaaat cctatatatc ttaatggcac atgcagcgca agtaggtcta caagacgcta 7620 cttcccctat catagaagag cttatcacct ttcatgatca cgccctcata atcattttcc 7680 ttatctgctt cctagtcctg tatgcccttt tcctaacact cacaacaaaa ctaactaata 7740 ctaacatctc agacgctcag gaaatagaaa ccgtctgaac tatcctgccc gccatcatcc 7800 tagtcctcat cgccctccca tccctacgca tcctttacat aacagacgag gtcaacgatc 7860 cctcccttac catcaaatca attggccacc aatggtactg aacctacgag tacaccgact 7920 acggcggact aatcttcaac tcctacatac ttcccccatt attcctagaa ccaggcgacc 7980 tgcgactcct tgacgttgac aatcgagtag tactcccgat tgaagccccc attcgtataa 8040 taattacatc acaagacgtc ttgcactcat gagctgtccc cacattaggc ttaaaaacag 8100 atgcaattcc cggacgtcta aaccaaacca ctttcaccgc tacacgaccg ggggtatact 8160 acggtcaatg ctctgaaatc tgtggagcaa accacagttt catgcccatc gtcctagaac 8220 taattcccct aaaaatcttt gaaatagggc ccgtatttac cctatagcac cccctctacc 8280 ccctctagag cccactgtaa agctaactta gcattaacct tttaagttaa agattaagag 8340 aaccaacacc tctttacagt gaaatgcccc aactaaatac taccgtatgg cccaccataa 8400 ttacccccat actccttaca ctattcctca tcacccaact aaaaatatta aacacaaact 8460 accacttacc tccctcacca aagcccataa aaataaaaaa ttataacaaa ccctgagaac 8520 caaaatgaac gaaaatctgt tcgcttcatt cattgccccc acaatcctag gcctacccgc 8580 cgcagtactg atcattctat ttccccctct attgatcccc acctccaaat atctcatcaa 8640 caaccgacta attaccaccc aacaatgact aatcaaacta acctcaaaac aaatgatagc 8700 catacacaac actaaaggac gaacctgatc tcttatacta gtatccttaa tcatttttat 8760 tgccacaact aacctcctcg gactcctgcc tcactcattt acaccaacca cccaactatc 8820 tataaaccta gccatggcca tccccttatg agcgggcgca gtgattatag gctttcgctc 8880 taagattaaa aatgccctag cccacttcct accacaaggt acacctacac cccttatccc 8940 catactagtt attatcgaaa ccatcagcct actcattcaa ccaatagccc tagccgtacg 9000 cctaaccgct aacattactg caggccacct actcatgcat ctaattggaa gcgccaccct 9060 agcaatatca accattaacc ttccctctac acttatcatc ttcacaattc taattctact 9120 gactatccta gaagtcgctg tcgccttaat ccaagcctac gttttcacac ttctagtaag 9180 cctctacctg cacgacaaca cataatgacc caccaatcac atgcctatca tatagtaaaa 9240 cccagcccat gacccctaac aggggccctc tcagccctcc taatgacctc cggcctagcc 9300 atgtgatttc acttccactc cataacgctc ctcatactag gcctgctaac caacacacta 9360 accatatacc aatgatggcg cgatgtaaca cgagaaagca cataccaagg ccaccacaca 9420 ccacctgtcc aaaaaggcct tcgatacggg ataatcctat ttattacctc agaagttttt 9480 ttcttcgcag gatttttctg agccttttac cactccagcc tagcccctac cccccaacta 9540 ggagggcact ggcccccaac aggcatcacc ccgctaaatc ccctagaagt cccactccta 9600 aacacatccg tattactcgc atcaggagta tcaatcacct gagctcacca tagtctaata 9660 gaaaacaacc gaaaccaaat aattcaagca ctgcttatta caattttact gggtctctat 9720 tttaccctcc tacaagcctc agagtacttc gagtctccct tcaccatttc cgacggcatc 9780 tacggctcaa cattttttgt agccacaggc ttccatggac ttcacgtcat tattggctca 9840 actttcctca ctatctgctt catccgccaa ctaatatttc actttacatc caaacatcac 9900 tttggcttcg aagccgccgc ctgatactgg cattttgtag atgtggtttg actatttctg 9960 tatgtctcca tctattgatg agggtcttac tcttttagta taaatagtac cgttaacttc 10020 caattaacta gttttgacaa cattcaaaaa agagtaataa acttcgcctt aattttaata 10080 atcaacaccc tcctagcctt actactaata attattacat tttgactacc acaactcaac 10140 ggctacatag aaaaatccac cccttacgag tgcggcttcg accctatatc ccccgcccgc 10200 gtccctttct ccataaaatt cttcttagta gctattacct tcttattatt tgatctagaa 10260 attgccctcc ttttacccct accatgagcc ctacaaacaa ctaacctgcc actaatagtt 10320 atgtcatccc tcttattaat catcatccta gccctaagtc tggcctatga gtgactacaa 10380 aaaggattag actgagccga attggtatat agtttaaaca aaacgaatga tttcgactca 10440 ttaaattatg ataatcatat ttaccaaatg cccctcattt acataaatat tatactggca 10500 tttaccatct cacttctagg aatactagta tatcgctcac acctcatatc ctccctacta 10560 tgcctagaag gaataatact atcgctattc attatagcta ctctcataac cctcaacacc 10620 cactccctct tagccaatat tgtgcctatt gccatactag tttttgccgc ctgcgaagca 10680 gcggtaggcc tagccctact agtctcaatc tccaacacat atggcctaga ctacgtacat 10740 aacctaaacc tactccaatg ctaaaactaa tcgtcccaac aattatatta ctaccactga 10800 catgactctc caaaaaacac ataatttgaa tcaacacaac cacccacagc ctaattatta 10860 gcatcatccc cctgctattt tttaaccaaa tcaacaacaa cctatttagc tgctccctaa 10920 ccttttcctc cgaccctcta acaacccccc tcctaatact aactacctga ctcctacccc 10980 tcacaatcat ggcaagccaa cgccacttat ccagtgaacc actatcacga aaaaaactct 11040 acctctctat actaatctcc ctacaaatct ccttaattat aacattcaca gccacagaac 11100 taatcatatt ttatatcttc ttcgaaacca cacttatccc caccttggct atcatcaccc 11160 gatgaggcaa ccagccagaa cgcctgaacg caggcacata cttcctattc tacaccctag 11220 taggctccct tcccctactc atcgcactaa tttacactca caacacccta ggctcactaa 11280 acattctact acttaccctc actgcccaag aactatcaaa ctcctgagcc aacaacttaa 11340 tatgactagc ttacacaata gcttttatag taaagatacc tctttacgga ctccacttat 11400 gactccctaa agcccatgtc gaagccccca tcgctgggtc aatagtactt gccgcagtac 11460 tcttaaaact aggcggctat ggtataatac gcctcacact cattctcaac cccctgacaa 11520 aacacatagc ctaccccttc cttgtactat ccctatgagg cataattata acaagctcca 11580 tctgcctacg acaaacagac ctaaaatcgc tcattgcata ctcttcaatc agccacatag 11640 ccctcgtagt gacagccatt ctcatccaaa ccccctgaag cttcaccggc gcagtcattc 11700 tcataatcgc ccacggactt acatcctcat tactattctg cctagcaaac tcaaactacg 11760 aacgcactca cagtcgcatc ataatcctct ctcaaggact tcaaactcta ctcccactaa 11820 tagctttttg atgacttcta gcaagcctcg ctaacctcgc cttacccccc actattaacc 11880 tactgggaga actctctgtg ctagtaacca cattctcctg atcaaatatc actctcctac 11940 ttacaggact caacatacta gtcacagccc tatactccct ctacatattt accacaacac 12000 aatgaggctc actcacccac cacattaaca acataaaacc ctcattcaca cgagaaaaca 12060 ccctcatatt catacaccta tcccccattc tcctcctatc cctcaacccc gacatcatta 12120 ccgggttttc ctcttgtaaa tatagtttaa ccaaaacatc agattgtgaa tctgacaaca 12180 gaggcttacg accccttatt taccgagaaa gctcacaaga actgctaact catgccccca 12240 tgtctaacaa catggctttc tcaactttta aaggataaca gctatccatt ggtcttaggc 12300 cccaaaaatt ttggtgcaac tccaaataaa agtaataacc atgcacacta ctataaccac 12360 cctaaccctg acttccctaa ttccccccat ccttaccacc ctcgttaacc ctaacaaaaa 12420 aaactcatac ccccattatg taaaatccat tgtcgcatcc acctttatta tcagtctctt 12480 ccccacaaca atattcatgt gcctagacca agaagttatt atctcgaact gacactgagc 12540 cacaacccaa acaacccagc tctccctaag cttcaaacta gactacttct ccataatatt 12600 catccctgta gcattgttcg ttacatggtc catcatagaa ttctcactgt gatatataaa 12660 ctcagaccca aacattaatc agttcttcaa atatctactc attttcctaa ttaccatact 12720 aatcttagtt accgctaaca acctattcca actgttcatc ggctgagagg gcgtaggaat 12780 tatatccttc ttgctcatca gttgatgata cgcccgagca gatgccaaca cagcagccat 12840 tcaagcaatc ctatacaacc gtatcggcga tatcggtttc atcctcgcct tagcatgatt 12900 tatcctacac tccaactcat gagacccaca acaaatagcc cttctaaacg ctaatccaag 12960 cctcacccca ctactaggcc tcctcctagc agcagcaggc aaatcagccc aattaggcct 13020 ccacccctga ctcccctcag ccatagaagg ccccacccca gtctcagccc tactccactc 13080 aagcactata gttgtagcag gagtcttctt actcatccgc ttccaccccc tagcagaaaa 13140 tagcccacta atccaaactc taacactatg cttaggcgct atcaccactc tgttcgcagc 13200 agtctgcgcc cttacacaaa atgacatcaa aaaaatcgta gccttctcca cttcaagtca 13260 actaggactc atagtagtta caatcggcat caaccaacca cacctagcat tcctgcacat 13320 ctgtacccac gccttcttca aagccatact atttatgtgc tccgggtcca tcatccacaa 13380 ccttaacaat gaacaagata ttcgaaaaat aggaggacta ctcaaaacca tacctctcac 13440 ttcaacctcc ctcaccattg gcagcctagc attagcagga atacctttcc tcacaggttt 13500 ctattccaaa gaccacatca tcgaaaccgc aaacatatca tacacaaacg cctgagccct 13560 atctattact ctcatcgcta cctccctaac aagcgcctat agcactcgaa taattcttct 13620 caccctaaca ggtcaacctc gcttccctac ccttactaac attaacgaaa ataaccccac 13680 cctactaaac cccattaaac gcctggcagc cggaagccta ttcgcaggat ttctcattac 13740 taacaacatt tcccccgcat cccccttcca aacaacaatc cccctctacc taaaactcac 13800 agccctcgct gtcactctcc taggacttct aacagcccta gacctcaact acctaaccaa 13860 caaacttaaa ataaaatccc cactatgcac attttatttc tccaacatac tcggattcta 13920 ccctaccatc acacaccgca caatccccta tctaggcctt cttacgagcc aaaacctgcc 13980 cctactcctc ctagacctaa cctgactaga aaagctacta cctaaaacaa tttcacagca 14040 ccaaatctcc acctccatca tcacctcaac ccaaaaaggc ataattaaac tttacttcct 14100 ctctttcttc ttcccactca tcctaaccct actcctaatc acataaccta ttcccccgag 14160 caatctcaat tacaatatac acaccaacaa acaatgttca accagtaact actactaatc 14220 aacgcccata atcatacaaa gcccccgcac caataggatc ctcccgaatc aaccctgacc 14280 cctctccttc ataaattatt cagcttccta cactattaaa gtttaccaca accaccaccc 14340 catcatactc tttcacccac agcaccaacc ccacctccat cgctaacccc actaaaacac 14400 tcaccaagac ctcaacccct gacccccatg cctcaggata ctcctcaata gccatcgctg 14460 tagtatatcc aaagacaacc atcattcccc ctaaataaat taaaaaaact attaaaccca 14520 tataacctcc cccaaaattc agaataataa cacacccgac cacaccgcta acaatcaata 14580 ctaaaccccc ataaatagga gaaggcttag aagaaaaccc cacaaacccc attactaaac 14640 ccacactcaa cagaaacaaa gcatacatca ttattctcgc acggactaca accacgacca 14700 atgatatgaa aaaccatcgt tgtatttcaa ctacaagaac accaatgacc ccaatacgca 14760 aaattaaccc cctaataaaa ttaattaacc actcattcat cgacctcccc accccatcca 14820 acatctccgc atgatgaaac ttcggctcac tccttggcgc ctgcctgatc ctccaaatca 14880 ccacaggact attcctagcc atgcactact caccagacgc ctcaaccgcc ttttcatcaa 14940 tcgcccacat cactcgagac gtaaattatg gctgaatcat ccgctacctt cacgccaatg 15000 gcgcctcaat attctttatc tgcctcttcc tacacatcgg gcgaggccta tattacggat 15060 catttctcta ctcagaaacc tgaaacatcg gcattatcct cctgcttgca actatagcaa 15120 cagccttcat aggctatgtc ctcccgtgag gccaaatatc attctgaggg gccacagtaa 15180 ttacaaactt actatccgcc atcccataca ttgggacaga cctagttcaa tgaatctgag 15240 gaggctactc agtagacagt cccaccctca cacgattctt tacctttcac ttcatcttgc 15300 ccttcattat tgcagcccta gcagcactcc acctcctatt cttgcacgaa acgggatcaa 15360 acaaccccct aggaatcacc tcccattccg ataaaatcac cttccaccct tactacacaa 15420 tcaaagacgc cctcggctta cttctcttcc ttctctcctt aatgacatta acactattct 15480 caccagacct cctaggcgac ccagacaatt ataccctagc caacccctta aacacccctc 15540 cccacatcaa gcccgaatga tatttcctat tcgcctacac aattctccga tccgtcccta 15600 acaaactagg aggcgtcctt gccctattac tatccatcct catcctagca ataatcccca 15660 tcctccatat atccaaacaa caaagcataa tatttcgccc actaagccaa tcactttatt 15720 gactcctagc cgcagacctc ctcattctaa cctgaatcgg aggacaacca gtaagctacc 15780 cttttaccat cattggacaa gtagcatccg tactatactt cacaacaatc ctaatcctaa 15840 taccaactat ctccctaatt gaaaacaaaa tactcaaatg ggcctgtcct tgtagtataa 15900 actaatacac cagtcttgta aaccggagat gaaaaccttt ttccaaggac aaatcagaga 15960 aaaagtcttt aactccacca ttagcaccca aagctaagat tctaatttaa actattctct 16020 gttctttcat ggggaagcag atttgggtac cacccaagta ttgactcacc catcaacaac 16080 cgctatgtat ttcgtacatt actgccagcc accatgaata ttgtacggta ccataaatac 16140 ttgaccacct gtagtacata aaaccccaac ccacatcaaa accctccccc catgcttaca 16200 agcaagcaca gtaatcaacc ttcaactgtc acacatcaac tgcaactcca aagccacccc 16260 tcacccacta ggatatcaac aaacctacgc acccttaaca gtacatagca cataaagcca 16320 tttaccgtac atagcacatt acagtcaaat cccttctcgt ccccatggat gacccccctc 16380 agataggggt cccttgacca ccatcctccg tgaaatcaat atcccgcaca agagtgctac 16440 tctcctcgct ccgggcccat aacacttggg ggtagctaaa gtgaactgta tccgacatct 16500 ggttcctact tcagggccat aaagcctaaa tagcccacac gttcccctta aataagacat 16560 cacgatg 16567 // ID KC345806; SV 1; circular; genomic DNA; STD; HUM; 16567 BP. XX AC KC345806; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT6_176 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16567 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16567 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; 0f0fa465bbe58c59210d69f3575e7195. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16567 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT6_176" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="Buga" FT /db_xref="taxon:9606" FT /haplogroup="L0k" FT D-loop complement(join(16022..16567,1..575)) FT tRNA 576..646 FT /product="tRNA-Phe" FT rRNA 647..1600 FT /product="12S ribosomal RNA" FT tRNA 1601..1669 FT /product="tRNA-Val" FT rRNA 1670..3227 FT /product="16S ribosomal RNA" FT tRNA 3228..3302 FT /product="tRNA-Leu" FT gene 3305..4260 FT /gene="ND1" FT CDS 3305..4260 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4259..4260,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82433.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPITISSIPPQT" FT tRNA 4261..4329 FT /product="tRNA-Ile" FT tRNA complement(4327..4398) FT /product="tRNA-Gln" FT tRNA 4400..4467 FT /product="tRNA-Met" FT gene 4468..5509 FT /gene="ND2" FT CDS 4468..5509 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5509,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82434.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5510..5574 FT /product="tRNA-Trp" FT tRNA complement(5585..5653) FT /product="tRNA-Ala" FT tRNA complement(5655..5727) FT /product="tRNA-Asn" FT tRNA complement(5759..5824) FT /product="tRNA-Cys" FT tRNA complement(5824..5889) FT /product="tRNA-Tyr" FT gene 5902..7443 FT /gene="COX1" FT CDS 5902..7443 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B2U9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B2U9" FT /protein_id="AGD82435.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNVLSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7443..7514) FT /product="tRNA-Ser" FT tRNA 7516..7583 FT /product="tRNA-Asp" FT gene 7584..8267 FT /gene="COX2" FT CDS 7584..8267 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /protein_id="AGD82436.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8293..8362 FT /product="tRNA-Lys" FT gene 8364..8570 FT /gene="ATP8" FT CDS 8364..8570 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82437.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8525..9205 FT /gene="ATP6" FT CDS 8525..9205 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B1L8" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B1L8" FT /protein_id="AGD82438.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEVAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9205..9988 FT /gene="COX3" FT CDS 9205..9988 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9988,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82439.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9989..10056 FT /product="tRNA-Gly" FT gene 10057..10402 FT /gene="ND3" FT CDS 10057..10402 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10402,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82440.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWAE" FT tRNA 10403..10467 FT /product="tRNA-Arg" FT gene 10468..10764 FT /gene="ND4L" FT CDS 10468..10764 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AGD82441.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10758..12135 FT /gene="ND4" FT CDS 10758..12135 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12135,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9B1S7" FT /db_xref="InterPro:IPR000260" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="InterPro:IPR010227" FT /db_xref="UniProtKB/TrEMBL:Q9B1S7" FT /protein_id="AGD82442.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSLTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12136..12204 FT /product="tRNA-His" FT tRNA 12205..12263 FT /product="tRNA-Ser" FT tRNA 12264..12334 FT /product="tRNA-Leu" FT gene 12335..14146 FT /gene="ND5" FT CDS 12335..14146 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q9B1F8" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q9B1F8" FT /protein_id="AGD82443.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPASPFQTTIPLYLKLTALAVTLLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPTITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14147..14671) FT /gene="ND6" FT CDS complement(14147..14671) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82444.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14672..14740) FT /product="tRNA-Glu" FT gene 14745..15885 FT /gene="CYTB" FT CDS 14745..15885 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15885,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q6VJ80" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q6VJ80" FT /protein_id="AGD82445.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15886..15951 FT /product="tRNA-Thr" FT tRNA complement(15953..16021) FT /product="tRNA-Pro" XX SQ Sequence 16567 BP; 5117 A; 5183 C; 2177 G; 4089 T; 1 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcgagc atacctatta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct ncccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tattttcccc tcccactccc atactactaa 480 tctcatcaat acaacccccg cccatcctac ccagcacaca caccgctgct aaccccatac 540 cccgaaccaa ccaaacccca aagacacccc ccacagttta tgtagcttac ctcctcaaag 600 caatacactg aaaatgttta gacgggctca catcacccca taaacaaata ggtttggtcc 660 tagcctttct attagctctt agtaagatta cacatgcaag catccccgtt ccagtgagtt 720 caccctctaa atcaccacga tcaaaaggga caagcatcaa gcacgcaaca atgcagctca 780 aaacgcttag cctagccaca cccccacggg aaacagcagt gataaacctt tagcaataaa 840 cgaaagttca actaagctat actaacccca gggttggtca atttcgtgcc agccaccgcg 900 gtcacacgat taacccaagt caatagaagc cggcgtaaag agtgttttag atcaccccct 960 ccccaataaa gctaaaactc acctgagttg taaaaaactc cagttgacac aaaataaact 1020 acgaaagtgg ctttaacata tctgaataca caatagctaa gacccaaact gggattagat 1080 accccactat gcttagccct aaacctcaac agttaaatca acaaaactgc tcgccagaac 1140 actacgagcc acagcttaaa actcaaagga cctggcggtg cttcatatcc ctctagagga 1200 gcctgttctg taatcgataa accccgatca acctcaccac cccttgctca gcctatatac 1260 cgccatcttc agcaaaccct gatgaaggct acaaagtaag cgcaagtacc cacgtaaaga 1320 cgttaggtca aggtgtagcc catgaggtgg caagaaatgg gctacatttt ctaccccaga 1380 aaactacgat agcccttatg aaacttaagg gtcgaaggtg gatttagcag taaactgaga 1440 gtagagtgct tagttgaaca gggccctgaa gcgcgtacac accgcccgtc accctcctca 1500 agtatacttc aaaggacatt taactaaaac ccctacgcat ttatatagag gagacaagtc 1560 gtaacatggt aagtgtactg gaaagtgcac ttggacgaac cagagtgtag cttaacacaa 1620 agcacccaac ttacacttag gagatttcaa cttaacttga ccgctctgag ctaaacctag 1680 ccccaaaccc actccacctt actaccagac aaccttagcc aaaccattta cccaaataaa 1740 gtataggcga tagaaattga aacctggcgc aatagatata gtaccgcaag ggaaagatga 1800 aaaattataa ccaagcataa tatagcaagg actaacccct ataccttctg cataatgaat 1860 taactagaaa taactttgca aggagagcca aagctaagac ccccgaaacc agacgagcta 1920 cctaagaaca gctaaaagag cacacccgtc tatgtagcaa aatagtggga agatttatag 1980 gtagaggcga caaacctacc gagcctggtg atagctggtt gtccaagata gaatcttagt 2040 tcaactttaa atttgcccac agaaccctct aaatcccctt gtaaatttaa ctgttagtcc 2100 aaagaggaac agctctttgg acactaggaa aaaaccttgt agagagagta aaaaatttaa 2160 cacccatagt aggcctaaaa gcagccacca attaagaaag cgttcaagct caacacccac 2220 tacctaaaaa atcccaaaca tataactgaa ctcctcacac ccaattggac caatctatca 2280 ccctatagaa gaactaatgt tagtataagt aacatgaaaa cattctcctc cgcataagcc 2340 tgcgtcagat taaaacactg aactgacaat taacagccca atatctacaa tcaaccaaca 2400 agtcattatt accctcactg tcaacccaac acaggcatgc tcataaggaa aggttaaaaa 2460 aagtaaaagg aactcggcaa atcttacccc gcctgtttac caaaaacatc acctctagca 2520 tcaccagtat tagaggcacc gcctgcccag tgacacatgt ttaacggccg cggtacccta 2580 accgtgcaaa ggtagcataa tcacttgttc cttaaatagg gacctgtatg aatggctcca 2640 cgagggttca gctgtctctt acttttaacc agtgaaattg acctgcccgt gaagaggcgg 2700 gcatgacaca gcaagacgag aagaccctat ggagctttaa tttattaatg caaacaatac 2760 ctaacaaacc cacaggtcct aaactaccaa acctgcatta aaaatttcgg ttggggcgac 2820 ctcggagcag aaccaaacct ccgagcagta catgctaaga cttcaccagt caaagcgaac 2880 taccatactc aattgatcca ataacttgac caacggaaca agttacccta gggataacag 2940 cgcaatccta ttctagagtc catatcaaca atagggttta cgacctcgat gttggatcag 3000 gacatcccga tggtgcagcc gctattaaag gttcgtttgt tcaacgatta aagtcctacg 3060 tgatctgagt tcagaccgga gtaatccagg tcggtttcta tctacttcaa attcctccct 3120 gtacgaaagg acaagagaaa taaggcctac ttcacaaagc gccttccccc gtaaatgata 3180 tcatctcaac ttagtattat acccacaccc acccaagaac agggtttgtt aagatggcag 3240 agcccggtaa tcgcataaaa cttaaaactt tacagtcaga ggttcaattc ctcttcttaa 3300 caacataccc atggccaacc tcctactcct cattgtaccc attctaatcg caatggcatt 3360 cctaatgctt accgaacgaa aaattctagg ctatatacaa ctacgcaaag gccccaacgt 3420 tgtaggcccc tacgggctac tacaaccctt cgctgacgcc ataaaactct tcaccaaaga 3480 gcccctaaaa cccgccacat ctaccatcac cctatacatc accgccccga ccttagctct 3540 caccatcgct cttctactat gaacccccct ccccataccc aaccccctgg ttaacctcaa 3600 cctaggcctc ctatttattc tagccacctc tagcctagcc gtttactcaa tcctctgatc 3660 agggtgagca tcaaactcaa actacgccct gatcggcgca ctgcgagcag tagcccaaac 3720 aatctcatat gaagtcaccc tagccatcat tctactatca acattactaa taagtggctc 3780 ctttaacctc tccaccctta tcacaacaca agaacacctc tgattactcc tgccatcatg 3840 acccttggcc ataatatgat ttatctccac actagcagag accaaccgaa cccccttcga 3900 ccttgccgaa ggggagtccg aactagtctc aggcttcaac atcgaatacg ccgcaggccc 3960 cttcgcccta ttcttcatag ccgaatacac aaacattatt ataataaaca ccctcaccac 4020 tacaatcttc ctaggaacaa catatgacgc actctcccct gaactctaca caacatattt 4080 tgtcaccaag accctacttc tgacctccct gttcttatga attcgaacag catacccccg 4140 attccgctac gaccaactca tacacctcct atgaaaaaac ttcctaccac tcaccctagc 4200 attacttata tgatatgtct ccatacccat tacaatctcc agcattcccc ctcaaaccta 4260 agaaatatgt ctgataaaag agttactttg atagagtaaa taataggagt ttaaaccccc 4320 ttatttctag gactatgaga atcgaaccca tccctgagaa tccaaaattc tccgtgccac 4380 ctatcacacc ccatcctaaa gtaaggtcag ctaaataagc tatcgggccc ataccccgaa 4440 aatgttggtt atacccttcc cgtactaatt aatcccctgg cccaacccgt catctactct 4500 accatctttg caggcacact catcacagcg ctaagctcac actgattttt tacctgagta 4560 ggcctagaaa taaacatgct agcctttatt ccagttctaa ccaaaaaaat aaaccctcgt 4620 tccacagaag ctgccatcaa gtatttcctc acgcaagcaa ccgcatccat aatccttcta 4680 atagctatcc tcttcaacaa tatactctcc ggacaatgaa ccataaccaa tactaccaat 4740 caatactcat cattaataat cataatggct atagcaataa aactaggaat agcccccttt 4800 cacttctgag tcccagaggt tacccaaggc acccctctga catccggcct gcttcttctc 4860 acatgacaaa aactagcccc catctcaatc atataccaaa tctccccctc actaaacgta 4920 agccttctcc tcactctctc aatcttatcc atcatagcag gcagttgagg tggattaaac 4980 caaacccagc tacgcaaaat cttagcatac tcctcaatta cccacatagg atgaataata 5040 gcagttctac cgtacaaccc taacataacc attcttaatt taactattta tattatccta 5100 actactaccg cattcctact actcaactta aactccagca ccacgaccct actactatct 5160 cgcacctgaa acaagctaac atgactaaca cccttaattc catccaccct cctctcccta 5220 ggaggcctgc ccccgctaac cggctttttg cccaaatggg ccattatcga agaattcaca 5280 aaaaacaata gcctcatcat ccccaccatc atagccacca tcaccctcct taacctctac 5340 ttctacctac gcctaatcta ctccacctca atcacactac tccccatatc taacaacgta 5400 aaaataaaat gacagtttga acatacaaaa cccaccccac tcctccccac actcatcgcc 5460 cttaccacgc tactcctacc tatctcccct tttatactaa taatcttata gaaatttagg 5520 ttaaatacag accaagagcc ttcaaagccc tcagtaagtt gcaatactta atttctgtaa 5580 cagctaagga ctgcaaaacc ccactctgca tcaactgaac gcaaatcagc cactttaatt 5640 aagctaagcc cttactagac caatgggact taaacccaca aacacttagt taacagctaa 5700 gcaccctaat caactggctt caatctactt ctcccgccgc cgggaaaaaa ggcgggagaa 5760 gccccggcag gtttgaagct gcttcttcga atttgcaatt caatatgaga atcacctcgg 5820 agctggtaaa aagaggccta acccctgtct ttagatttac agtccaatgc ttcactcagc 5880 cattttacct cacccccact gatgttcgcc gaccgttgac tattctctac aaaccacaaa 5940 gacattggaa cactatacct attattcggc gcatgagctg gagtcctagg cacagctcta 6000 agcctcctta ttcgagccga gctgggccag ccaggcaacc ttctaggtaa cgaccacatc 6060 tacaacgtta tcgtcacagc ccatgcattt gtaataatct tcttcatagt aatacccatc 6120 ataatcggag gctttggcaa ctgactagtt cccctaataa tcggtgcccc cgatatggcg 6180 ttcccccgca taaacaacat aagcttctga ctcttacctc cctctctcct actcctgctc 6240 gcatctgcta tagtggaggc cggagcagga acaggttgaa cagtctaccc tcccttagca 6300 gggaactact cccaccctgg agcctccgta gacctaacca tcttctcctt acacctagca 6360 ggtgtctcct ctatcttagg ggccatcaat ttcatcacaa caattatcaa tataaaaccc 6420 cctgccataa cccaatacca aacgcccctc ttcgtctgat ccgtcctaat cacagcagtc 6480 ctacttctcc tatctctccc agtcctagct gctggcatca ctatactact aacagaccgc 6540 aacctcaaca ccaccttctt cgaccccgcc ggaggaggag accccattct ataccaacac 6600 ctattctgat ttttcggtca ccctgaagtt tatattctta tcctaccagg cttcggaata 6660 atctcccata ttgtaactta ctactccgga aaaaaagaac catttggata cataggtatg 6720 gtctgagcta tgatatcaat tggcttccta gggtttatcg tgtgagcaca ccatatattt 6780 acagtaggaa tagacgtaga cacacgagca tatttcacct ccgctaccat aatcatcgct 6840 atccccaccg gcgtcaaagt atttagctga ctcgccacac tccacggaag caatatgaaa 6900 tgatctgctg cagtgctctg agccctagga ttcatttttc ttttcaccgt aggtggcctg 6960 actggcattg tattagcaaa ctcatcacta gacatcgtac tacacgacac gtactacgtt 7020 gtagctcact tccactatgt cctatcaata ggagctgtat ttgccatcat aggaggcttc 7080 attcactgat ttcccctatt ctcaggctac accctagacc aaacctacgc caaaatccat 7140 ttcgctatca tattcatcgg cgtaaatcta actttcttcc cacaacactt tctcggccta 7200 tccggaatgc cccgacgtta ctcggactac cccgatgcat acaccacatg aaatgtccta 7260 tcatctgtag gctcattcat ttctctaaca gcagtaatat taataatttt catgatttga 7320 gaagccttcg cttcgaagcg aaaagtccta atagtagaag aaccctccat aaacctggag 7380 tgactatatg gatgcccccc accctaccac acattcgaag aacccgtata cataaaatct 7440 agacaaaaaa ggaaggaatc gaacccccca aagctggttt caagccaacc ccatggcctc 7500 catgactttt tcaaaaagat attagaaaaa ccatttcata actttgtcaa agttaaatta 7560 taggctaaat cctatatatc ttaatggcac atgcagcgca agtaggtcta caagacgcta 7620 cttcccctat catagaagag cttatcacct ttcatgatca cgccctcata atcattttcc 7680 ttatctgctt cctagtcctg tatgcccttt tcctaacact cacaacaaaa ctaactaata 7740 ctaacatctc agacgctcag gaaatagaaa ccgtctgaac tatcctgccc gccatcatcc 7800 tagtcctcat cgccctccca tccctacgca tcctttacat aacagacgag gtcaacgatc 7860 cctcccttac catcaaatca attggccacc aatggtactg aacctacgag tacaccgact 7920 acggcggact aatcttcaac tcctacatac ttcccccatt attcctagaa ccaggcgacc 7980 tgcgactcct tgacgttgac aatcgagtag tactcccgat tgaagccccc attcgtataa 8040 taattacatc acaagacgtc ttgcactcat gagctgtccc cacattaggc ttaaaaacag 8100 atgcaattcc cggacgtcta aaccaaacca ctttcaccgc tacacgaccg ggggtatact 8160 acggtcaatg ctctgaaatc tgtggagcaa accacagttt catgcccatc gtcctagaac 8220 taattcccct aaaaatcttt gaaatagggc ccgtatttac cctatagcac cccctctacc 8280 ccctctagag cccactgtaa agctaactta gcattaacct tttaagttaa agattaagag 8340 aaccaacacc tctttacagt gaaatgcccc aactaaatac taccgtatgg cccaccataa 8400 ttacccccat actccttaca ctattcctca tcacccaact aaaaatatta aacacaaact 8460 accacttacc tccctcacca aagcccataa aaataaaaaa ttataacaaa ccctgagaac 8520 caaaatgaac gaaaatctgt tcgcttcatt cattgccccc acaatcctag gcctacccgc 8580 cgcagtactg atcattctat ttccccctct attgatcccc acctccaaat atctcatcaa 8640 caaccgacta attaccaccc aacaatgact aatcaaacta acctcaaaac aaatgatagc 8700 catacacaac actaaaggac gaacctgatc tcttatacta gtatccttaa tcatttttat 8760 tgccacaact aacctcctcg gactcctgcc tcactcattt acaccaacca cccaactatc 8820 tataaaccta gccatggcca tccccttatg agcgggcgca gtgattatag gctttcgctc 8880 taagattaaa aatgccctag cccacttcct accacaaggt acacctacac cccttatccc 8940 catactagtt attatcgaaa ccatcagcct actcattcaa ccaatagccc tagccgtacg 9000 cctaaccgct aacattactg caggccacct actcatgcat ctaattggaa gcgccaccct 9060 agcaatatca accattaacc ttccctctac acttatcatc ttcacaattc taattctact 9120 gactatccta gaagtcgctg tcgccttaat ccaagcctac gttttcacac ttctagtaag 9180 cctctacctg cacgacaaca cataatgacc caccaatcac atgcctatca tatagtaaaa 9240 cccagcccat gacccctaac aggggccctc tcagccctcc taatgacctc cggcctagcc 9300 atgtgatttc acttccactc cataacgctc ctcatactag gcctgctaac caacacacta 9360 accatatacc aatgatggcg cgatgtaaca cgagaaagca cataccaagg ccaccacaca 9420 ccacctgtcc aaaaaggcct tcgatacggg ataatcctat ttattacctc agaagttttt 9480 ttcttcgcag gatttttctg agccttttac cactccagcc tagcccctac cccccaacta 9540 ggagggcact ggcccccaac aggcatcacc ccgctaaatc ccctagaagt cccactccta 9600 aacacatccg tattactcgc atcaggagta tcaatcacct gagctcacca tagtctaata 9660 gaaaacaacc gaaaccaaat aattcaagca ctgcttatta caattttact gggtctctat 9720 tttaccctcc tacaagcctc agagtacttc gagtctccct tcaccatttc cgacggcatc 9780 tacggctcaa cattttttgt agccacaggc ttccatggac ttcacgtcat tattggctca 9840 actttcctca ctatctgctt catccgccaa ctaatatttc actttacatc caaacatcac 9900 tttggcttcg aagccgccgc ctgatactgg cattttgtag atgtggtttg actatttctg 9960 tatgtctcca tctattgatg agggtcttac tcttttagta taaatagtac cgttaacttc 10020 caattaacta gttttgacaa cattcaaaaa agagtaataa acttcgcctt aattttaata 10080 atcaacaccc tcctagcctt actactaata attattacat tttgactacc acaactcaac 10140 ggctacatag aaaaatccac cccttacgag tgcggcttcg accctatatc ccccgcccgc 10200 gtccctttct ccataaaatt cttcttagta gctattacct tcttattatt tgatctagaa 10260 attgccctcc ttttacccct accatgagcc ctacaaacaa ctaacctgcc actaatagtt 10320 atgtcatccc tcttattaat catcatccta gccctaagtc tggcctatga gtgactacaa 10380 aaaggattag actgagccga attggtatat agtttaaaca aaacgaatga tttcgactca 10440 ttaaattatg ataatcatat ttaccaaatg cccctcattt acataaatat tatactggca 10500 tttaccatct cacttctagg aatactagta tatcgctcac acctcatatc ctccctacta 10560 tgcctagaag gaataatact atcgctattc attatagcta ctctcataac cctcaacacc 10620 cactccctct tagccaatat tgtgcctatt gccatactag tttttgccgc ctgcgaagca 10680 gcggtaggcc tagccctact agtctcaatc tccaacacat atggcctaga ctacgtacat 10740 aacctaaacc tactccaatg ctaaaactaa tcgtcccaac aattatatta ctaccactga 10800 catgactctc caaaaaacac ataatttgaa tcaacacaac cacccacagc ctaattatta 10860 gcatcatccc cctgctattt tttaaccaaa tcaacaacaa cctatttagc tgctccctaa 10920 ccttttcctc cgaccctcta acaacccccc tcctaatact aactacctga ctcctacccc 10980 tcacaatcat ggcaagccaa cgccacttat ccagtgaacc actatcacga aaaaaactct 11040 acctctctat actaatctcc ctacaaatct ccttaattat aacattcaca gccacagaac 11100 taatcatatt ttatatcttc ttcgaaacca cacttatccc caccttggct atcatcaccc 11160 gatgaggcaa ccagccagaa cgcctgaacg caggcacata cttcctattc tacaccctag 11220 taggctccct tcccctactc atcgcactaa tttacactca caacacccta ggctcactaa 11280 acattctact acttaccctc actgcccaag aactatcaaa ctcctgagcc aacaacttaa 11340 tatgactagc ttacacaata gcttttatag taaagatacc tctttacgga ctccacttat 11400 gactccctaa agcccatgtc gaagccccca tcgctgggtc aatagtactt gccgcagtac 11460 tcttaaaact aggcggctat ggtataatac gcctcacact cattctcaac cccctgacaa 11520 aacacatagc ctaccccttc cttgtactat ccctatgagg cataattata acaagctcca 11580 tctgcctacg acaaacagac ctaaaatcgc tcattgcata ctcttcaatc agccacatag 11640 ccctcgtagt gacagccatt ctcatccaaa ccccctgaag cttcaccggc gcagtcattc 11700 tcataatcgc ccacggactt acatcctcat tactattctg cctagcaaac tcaaactacg 11760 aacgcactca cagtcgcatc ataatcctct ctcaaggact tcaaactcta ctcccactaa 11820 tagctttttg atgacttcta gcaagcctcg ctaacctcgc cttacccccc actattaacc 11880 tactgggaga actctctgtg ctagtaacca cattctcctg atcaaatatc actctcctac 11940 ttacaggact caacatacta gtcacagccc tatactccct ctacatattt accacaacac 12000 aatgaggctc actcacccac cacattaaca acataaaacc ctcattcaca cgagaaaaca 12060 ccctcatatt catacaccta tcccccattc tcctcctatc cctcaacccc gacatcatta 12120 ccgggttttc ctcttgtaaa tatagtttaa ccaaaacatc agattgtgaa tctgacaaca 12180 gaggcttacg accccttatt taccgagaaa gctcacaaga actgctaact catgccccca 12240 tgtctaacaa catggctttc tcaactttta aaggataaca gctatccatt ggtcttaggc 12300 cccaaaaatt ttggtgcaac tccaaataaa agtaataacc atgcacacta ctataaccac 12360 cctaaccctg acttccctaa ttccccccat ccttaccacc ctcgttaacc ctaacaaaaa 12420 aaactcatac ccccattatg taaaatccat tgtcgcatcc acctttatta tcagtctctt 12480 ccccacaaca atattcatgt gcctagacca agaagttatt atctcgaact gacactgagc 12540 cacaacccaa acaacccagc tctccctaag cttcaaacta gactacttct ccataatatt 12600 catccctgta gcattgttcg ttacatggtc catcatagaa ttctcactgt gatatataaa 12660 ctcagaccca aacattaatc agttcttcaa atatctactc attttcctaa ttaccatact 12720 aatcttagtt accgctaaca acctattcca actgttcatc ggctgagagg gcgtaggaat 12780 tatatccttc ttgctcatca gttgatgata cgcccgagca gatgccaaca cagcagccat 12840 tcaagcaatc ctatacaacc gtatcggcga tatcggtttc atcctcgcct tagcatgatt 12900 tatcctacac tccaactcat gagacccaca acaaatagcc cttctaaacg ctaatccaag 12960 cctcacccca ctactaggcc tcctcctagc agcagcaggc aaatcagccc aattaggcct 13020 ccacccctga ctcccctcag ccatagaagg ccccacccca gtctcagccc tactccactc 13080 aagcactata gttgtagcag gagtcttctt actcatccgc ttccaccccc tagcagaaaa 13140 tagcccacta atccaaactc taacactatg cttaggcgct atcaccactc tgttcgcagc 13200 agtctgcgcc cttacacaaa atgacatcaa aaaaatcgta gccttctcca cttcaagtca 13260 actaggactc atagtagtta caatcggcat caaccaacca cacctagcat tcctgcacat 13320 ctgtacccac gccttcttca aagccatact atttatgtgc tccgggtcca tcatccacaa 13380 ccttaacaat gaacaagata ttcgaaaaat aggaggacta ctcaaaacca tacctctcac 13440 ttcaacctcc ctcaccattg gcagcctagc attagcagga atacctttcc tcacaggttt 13500 ctattccaaa gaccacatca tcgaaaccgc aaacatatca tacacaaacg cctgagccct 13560 atctattact ctcatcgcta cctccctaac aagcgcctat agcactcgaa taattcttct 13620 caccctaaca ggtcaacctc gcttccctac ccttactaac attaacgaaa ataaccccac 13680 cctactaaac cccattaaac gcctggcagc cggaagccta ttcgcaggat ttctcattac 13740 taacaacatt tcccccgcat cccccttcca aacaacaatc cccctctacc taaaactcac 13800 agccctcgct gtcactctcc taggacttct aacagcccta gacctcaact acctaaccaa 13860 caaacttaaa ataaaatccc cactatgcac attttatttc tccaacatac tcggattcta 13920 ccctaccatc acacaccgca caatccccta tctaggcctt cttacgagcc aaaacctgcc 13980 cctactcctc ctagacctaa cctgactaga aaagctacta cctaaaacaa tttcacagca 14040 ccaaatctcc acctccatca tcacctcaac ccaaaaaggc ataattaaac tttacttcct 14100 ctctttcttc ttcccactca tcctaaccct actcctaatc acataaccta ttcccccgag 14160 caatctcaat tacaatatac acaccaacaa acaatgttca accagtaact actactaatc 14220 aacgcccata atcatacaaa gcccccgcac caataggatc ctcccgaatc aaccctgacc 14280 cctctccttc ataaattatt cagcttccta cactattaaa gtttaccaca accaccaccc 14340 catcatactc tttcacccac agcaccaacc ccacctccat cgctaacccc actaaaacac 14400 tcaccaagac ctcaacccct gacccccatg cctcaggata ctcctcaata gccatcgctg 14460 tagtatatcc aaagacaacc atcattcccc ctaaataaat taaaaaaact attaaaccca 14520 tataacctcc cccaaaattc agaataataa cacacccgac cacaccgcta acaatcaata 14580 ctaaaccccc ataaatagga gaaggcttag aagaaaaccc cacaaacccc attactaaac 14640 ccacactcaa cagaaacaaa gcatacatca ttattctcgc acggactaca accacgacca 14700 atgatatgaa aaaccatcgt tgtatttcaa ctacaagaac accaatgacc ccaatacgca 14760 aaattaaccc cctaataaaa ttaattaacc actcattcat cgacctcccc accccatcca 14820 acatctccgc atgatgaaac ttcggctcac tccttggcgc ctgcctgatc ctccaaatca 14880 ccacaggact attcctagcc atgcactact caccagacgc ctcaaccgcc ttttcatcaa 14940 tcgcccacat cactcgagac gtaaattatg gctgaatcat ccgctacctt cacgccaatg 15000 gcgcctcaat attctttatc tgcctcttcc tacacatcgg gcgaggccta tattacggat 15060 catttctcta ctcagaaacc tgaaacatcg gcattatcct cctgcttgca actatagcaa 15120 cagccttcat aggctatgtc ctcccgtgag gccaaatatc attctgaggg gccacagtaa 15180 ttacaaactt actatccgcc atcccataca ttgggacaga cctagttcaa tgaatctgag 15240 gaggctactc agtagacagt cccaccctca cacgattctt tacctttcac ttcatcttgc 15300 ccttcattat tgcagcccta gcagcactcc acctcctatt cttgcacgaa acgggatcaa 15360 acaaccccct aggaatcacc tcccattccg ataaaatcac cttccaccct tactacacaa 15420 tcaaagacgc cctcggctta cttctcttcc ttctctcctt aatgacatta acactattct 15480 caccagacct cctaggcgac ccagacaatt ataccctagc caacccctta aacacccctc 15540 cccacatcaa gcccgaatga tatttcctat tcgcctacac aattctccga tccgtcccta 15600 acaaactagg aggcgtcctt gccctattac tatccatcct catcctagca ataatcccca 15660 tcctccatat atccaaacaa caaagcataa tatttcgccc actaagccaa tcactttatt 15720 gactcctagc cgcagacctc ctcattctaa cctgaatcgg aggacaacca gtaagctacc 15780 cttttaccat cattggacaa gtagcatccg tactatactt cacaacaatc ctaatcctaa 15840 taccaactat ctccctaatt gaaaacaaaa tactcaaatg ggcctgtcct tgtagtataa 15900 actaatacac cagtcttgta aaccggagat gaaaaccttt ttccaaggac aaatcagaga 15960 aaaagtcttt aactccacca ttagcaccca aagctaagat tctaatttaa actattctct 16020 gttctttcat ggggaagcag atttgggtac cacccaagta ttgactcacc catcaacaac 16080 cgctatgtat ttcgtacatt actgccagcc accatgaata ttgtacggta ccataaatac 16140 ttgaccacct gtagtacata aaaccccaac ccacatcaaa accctccccc catgcttaca 16200 agcaagcaca gtaatcaacc ttcaactgtc acacatcaac tgcaactcca aagccacccc 16260 tcacccacta ggatatcaac aaacctacgc acccttaaca gtacatagca cataaagcca 16320 tttaccgtac atagcacatt acagtcaaat cccttctcgt ccccatggat gacccccctc 16380 agataggggt cccttgacca ccatcctccg tgaaatcaat atcccgcaca agagtgctac 16440 tctcctcgct ccgggcccat aacacttggg ggtagctaaa gtgaactgta tccgacatct 16500 ggttcctact tcagggccat aaagcctaaa tagcccacac gttcccctta aataagacat 16560 cacgatg 16567 // ID KC345807; SV 1; circular; genomic DNA; STD; HUM; 16568 BP. XX AC KC345807; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT5_001 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16568 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16568 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; 587ee1f601d624d29d2274e2a017e786. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16568 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT5_001" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="G||ana" FT /db_xref="taxon:9606" FT /haplogroup="L0d1" FT D-loop complement(join(16023..16568,1..576)) FT tRNA 577..647 FT /product="tRNA-Phe" FT rRNA 648..1601 FT /product="12S ribosomal RNA" FT tRNA 1602..1670 FT /product="tRNA-Val" FT rRNA 1671..3228 FT /product="16S ribosomal RNA" FT tRNA 3229..3303 FT /product="tRNA-Leu" FT gene 3306..4261 FT /gene="ND1" FT CDS 3306..4261 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4260..4261,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q4GRH9" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:Q4GRH9" FT /protein_id="AGD82446.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPTTISSIPPQT" FT tRNA 4262..4330 FT /product="tRNA-Ile" FT tRNA complement(4328..4399) FT /product="tRNA-Gln" FT tRNA 4401..4468 FT /product="tRNA-Met" FT gene 4469..5510 FT /gene="ND2" FT CDS 4469..5510 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5510,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:L7XDQ5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:L7XDQ5" FT /protein_id="AGD82447.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTXLNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5511..5575 FT /product="tRNA-Trp" FT tRNA complement(5586..5654) FT /product="tRNA-Ala" FT tRNA complement(5656..5728) FT /product="tRNA-Asn" FT tRNA complement(5760..5825) FT /product="tRNA-Cys" FT tRNA complement(5825..5890) FT /product="tRNA-Tyr" FT gene 5903..7444 FT /gene="COX1" FT CDS 5903..7444 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B1J9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B1J9" FT /protein_id="AGD82448.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7444..7515) FT /product="tRNA-Ser" FT tRNA 7517..7584 FT /product="tRNA-Asp" FT gene 7585..8268 FT /gene="COX2" FT CDS 7585..8268 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /protein_id="AGD82449.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8294..8363 FT /product="tRNA-Lys" FT gene 8365..8571 FT /gene="ATP8" FT CDS 8365..8571 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82450.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8526..9206 FT /gene="ATP6" FT CDS 8526..9206 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B185" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B185" FT /protein_id="AGD82451.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9206..9989 FT /gene="COX3" FT CDS 9206..9989 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9989,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82452.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9990..10057 FT /product="tRNA-Gly" FT gene 10058..10403 FT /gene="ND3" FT CDS 10058..10403 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10403,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82453.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWAE" FT tRNA 10404..10468 FT /product="tRNA-Arg" FT gene 10469..10765 FT /gene="ND4L" FT CDS 10469..10765 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AGD82454.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10759..12136 FT /gene="ND4" FT CDS 10759..12136 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12136,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82455.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12137..12205 FT /product="tRNA-His" FT tRNA 12206..12264 FT /product="tRNA-Ser" FT tRNA 12265..12335 FT /product="tRNA-Leu" FT gene 12336..14147 FT /gene="ND5" FT CDS 12336..14147 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q4F0F4" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q4F0F4" FT /protein_id="AGD82456.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPTSPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14148..14672) FT /gene="ND6" FT CDS complement(14148..14672) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /db_xref="GOA:Q4F0F3" FT /db_xref="InterPro:IPR001457" FT /db_xref="UniProtKB/TrEMBL:Q4F0F3" FT /protein_id="AGD82457.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNNVGSWMIYEGEGPGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14673..14741) FT /product="tRNA-Glu" FT gene 14746..15886 FT /gene="CYTB" FT CDS 14746..15886 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15886,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:A4ZL12" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:A4ZL12" FT /protein_id="AGD82458.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLLLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15887..15952 FT /product="tRNA-Thr" FT tRNA complement(15954..16022) FT /product="tRNA-Pro" XX SQ Sequence 16568 BP; 5130 A; 5183 C; 2165 G; 4089 T; 1 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcgaac atacctacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tattttcccc tcccactccc atactactaa 480 tctcatcaat acaaccccgc ccatcctacc cagcacacac acaccgctgc taaccccata 540 ccccgaacca accaaacccc aaagacaccc cccacagttt atgtagctta cctcctcaaa 600 gcaatacact gaaaatgttt agacgggctc acatcacccc ataaacaaat aggtttggtc 660 ctagcctttc tattagctct tagtaagatt acacatgcaa gcatccccgt tccagtgaat 720 tcaccctcta aatcaccacg atcaaaaggg acaagcatca agcacgcaac aatgcagctc 780 aaaacgctta gcctagccac acccccacgg gaaacagcag tgataaacct ttagcaataa 840 acgaaagttt aactaagcta tactaacccc agggttggtc aatttcgtgc cagccaccgc 900 ggtcacacga ttaacccaag tcaatagaag ccggcgtaaa gagtgtttta gatcaccccc 960 tccccaataa agctaaaact cacctgagtt gtaaaaaact ccagttgaca caaaataaac 1020 tacgaaagtg gctttaacat atctgaatac acaatagcta agacccaaac tgggattaga 1080 taccccacta tgcttagccc taaacctcaa cagttaaatc aacaaaactg ctcgccagaa 1140 cactacgagc cacagcttaa aactcaaagg acctggcggt gcttcatatc cctctagagg 1200 agcctgttct gtaatcgata aaccccgatc aacctcacca cctcttgctc agcctatata 1260 ccgccatctt cagcaaaccc tgatgaaggc tacaaagtaa gcgcaagtac ccacgtaaag 1320 acgttaggtc aaggtgtagc ccatgaggtg gcaagaaatg ggctacattt tctaccccag 1380 aaaactacga tagcccttat gaaacttaag ggtcgaaggt ggatttagca gtaaactaag 1440 agtagagtgc ttagttgaac agggccctga agcgcgtaca caccgcccgt caccctcctc 1500 aagtatactt caaaggacat ttaactaaaa cccctacgca tttatataga ggagacaagt 1560 cgtaacatgg taagtgtact ggaaagtgca cttggacgaa ccagagtgta gcttaacaca 1620 aagcacccaa cttacactta ggagatttca acttaacttg accgctctga gctaaaccta 1680 gccccaaacc cactccacct tactaccaga caaccttagc caaaccattt acccaaataa 1740 agtataggcg atagaaattg aaacctggcg caatagatat agtaccgcaa gggaaagatg 1800 aaaaattata accaagcata atatagcaag gactaacccc tataccttct gcataatgaa 1860 ttaactagaa ataactttgc aaggagagcc aaagctaaga cccccgaaac cagacgagct 1920 acctaagaac agctaaaaga gcacacccgt ctatgtagca aaatagtggg aagatttata 1980 ggtagaggcg acaaacctac cgagcctggt gatagctggt tgtccaagat agaatcttag 2040 ttcaacttta aatttgccca cagaaccctc taaatcccct tgtaaattta actgttagtc 2100 caaagaggaa cagctctttg gacactagga aaaaaccttg tagagagagt aaaaaattta 2160 acacccatag taggcctaaa agcagccacc aattaagaaa gcgttcaagc tcaacaccca 2220 ctacctaaaa aatcccaaac atataactga actcctcaca cccaattgga ccaatctatc 2280 accctataga agaactaatg ttagtataag taacatgaaa acattctcct ccgcataagc 2340 ctgcgtcaga ttaaaacact gaactgacaa ttaacagccc aatatctaca atcaaccaac 2400 aagtcattat taccctcact gtcaacccaa cacaggcatg ctcataagga aaggttaaaa 2460 aaagtaaaag gaactcggca aatcttaccc cgcctgttta ccaaaaacat cacctctagc 2520 atcaccagta ttagaggcac cgcctgccca gtgacacatg tttaacggcc gcggtaccct 2580 aaccgtgcaa aggtagcata atcacttgtt ccttaaatag ggacctgtat gaatggctcc 2640 acgagggttc agctgtctct tacttttaac cagtgaaatt gacctgcccg tgaagaggcg 2700 ggcataacac agcaagacga gaagacccta tggagcttta atttattaat gcaaacaata 2760 cctaacaaac ccacaggtcc taaactacca aacctgcatt aaaaatttcg gttggggcga 2820 cctcggagca gaacccaacc tccgagcagt acatgctaag acttcaccag tcaaagcgaa 2880 ctaccatact caattgatcc aataacttga ccaacggaac aagttaccct agggataaca 2940 gcgcaatcct attctagagt ccatatcaac aatagggttt acgacctcga tgttggatca 3000 ggacatcccg atggtgcagc cgctattaaa ggttcgtttg ttcaacgatt aaagtcctac 3060 gtgatctgag ttcagaccgg agtaatccag gtcggtttct atctacttca aattcctccc 3120 tgtacgaaag gacaagagaa ataaggccta cttcacaaag cgccttcccc cgtaaatgat 3180 atcatctcaa cttagtatta tacccacacc cacccaagaa cagggtttgt taagatggca 3240 gagcccggta atcgcataaa acttaaaact ttacagtcag aggttcaatt cctcttctta 3300 acaacatacc catggccaac ctcctactcc tcattgtacc cattctaatc gcaatggcat 3360 tcctaatgct taccgaacga aaaattctag gctatataca actacgcaaa ggccccaacg 3420 ttgtaggccc ctacggacta ctacaaccct tcgctgacgc cataaaactc ttcaccaaag 3480 agcccctaaa acccgccaca tctaccatca ccctatacat caccgccccg accttagctc 3540 tcaccatcgc tcttctacta tgaacccccc tccccatacc caaccccctg gttaacctca 3600 acctaggcct cctattcatt ctagccacct ctagcctagc cgtttactca atcctctgat 3660 cagggtgagc atcaaactca aactacgccc tgatcggcgc actgcgagca gtagcccaaa 3720 caatctcata tgaagtcacc ctagccatca ttctgctatc aacattacta ataagtggct 3780 cctttaacct ctccaccctt atcacaacac aagaacacct ctgattactc ctgccatcat 3840 gacccttggc cataatatga tttatctcca cactagcaga gaccaaccga acccccttcg 3900 accttgccga aggggagtcc gaactagtct caggcttcaa catcgaatac gccgcaggcc 3960 ccttcgccct attcttcata gccgaataca caaacattat tataataaac accctcacca 4020 ctacaatctt cctaggaaca acatatgacg cactctcccc tgaactctac acaacatatt 4080 ttgtcaccaa gaccctactt ctgacctccc tgttcttatg aattcgaaca gcataccccc 4140 gattccgcta cgaccaactc atacacctcc tatgaaaaaa cttcctacca ctcaccctag 4200 cattacttat atgatatgtc tccataccca ctacaatctc cagcattccc cctcaaacct 4260 aagaaatatg tctgataaaa gagttacttt gatagagtaa ataataggag tttaaacccc 4320 cttatttcta ggactatgag aatcgaaccc atccctgaga atccaaaatt ctccgtgcca 4380 cctatcacac cccatcctaa agtaaggtca gctaaataag ctatcgggcc cataccccga 4440 aaatgttggt tatacccttc ccgtactaat taatcccctg gcccaacccg tcatctactc 4500 taccatcttt gcaggcacac tcatcacagc gctaagctcg cactgatttt ttacctgagt 4560 aggcctagaa ataaacatgc tagcttttat tccagttcta accaaaaaaa taaaccctcg 4620 ttccacagaa gctgccatca agtatttcct cacgcaagca accgcatcca taatccttct 4680 aatagctatc ctcttcaaca atatactctc cggacaatga accataacca atactaccaa 4740 tcaatactca tcattaataa tcataatggc tatagcaata aaactaggaa tagccccctt 4800 tcacttctga gtcccagagg ttacccaagg cacccctctg acatccggcc tgcttcttct 4860 cacatgacaa aaactagccc ccatctcaat catataccaa atctctccct cactaaacgt 4920 aagccttctc ctcactctct caatcttatc catcatagca ggcagttgag gtggattaaa 4980 ccaaacccag ctacgcaaaa tcttagcata ctcctcaatt acccacatag gatgaataat 5040 agcagttcta ccgtacaacc ctaacataac cantcttaat ttaactattt atattatcct 5100 aactactacc gcattcctac tactcaactt aaactccagc accacgaccc tactactatc 5160 tcgcacctga aacaagctaa catgactaac acccttaatt ccatccaccc tcctctccct 5220 aggaggcctg cccccgctaa ccggcttttt gcccaaatgg gccattatcg aagaattcac 5280 aaaaaacaat agcctcatca tccccaccat catagccacc atcaccctcc ttaacctcta 5340 cttctaccta cgcctaatct actccacctc aatcacacta ctccccatat ctaacaacgt 5400 aaaaataaaa tgacagtttg aacatacaaa acccacccca ctcctcccca cactcatcgc 5460 ccttaccacg ctactcctac ctatctcccc ttttatacta ataatcttat agaaatttag 5520 gttaaataca gaccaagagc cttcaaagcc ctcagtaagt tgcaatactt aatttctgta 5580 acagctaagg actgcaaaac cccactctgc atcaactgaa cgcaaatcag ccactttaat 5640 taagctaagc ccttactaga ccaatgggac ttaaacccac aaacacttag ttaacagcta 5700 agcaccctaa tcaactggct tcaatctact tctcccgccg ccgggaaaaa aggcgggaga 5760 agccccggca ggtttgaagc tgcttcttcg aatttgcaat tcaatatgaa aatcacctcg 5820 gagctggtaa aaagaggcct aacccctgtc tttagattta cagtccaatg cttcactcag 5880 ccattttacc tcacccccac tgatgttcgc cgaccgttga ctattctcta caaaccacaa 5940 agacattgga acactatacc tattattcgg cgcatgagct ggagtcctag gcacagctct 6000 aagcctcctt attcgagccg agctgggcca gccaggcaac cttctaggta acgaccacat 6060 ctacaacgtt atcgtcacag cccatgcatt tgtaataatc ttcttcatag taatacccat 6120 cataatcgga ggctttggca actgactagt tcccctaata atcggtgccc ccgatatggc 6180 gttcccccgc ataaacaaca taagcttctg actcttacct ccctctctcc tactcctgct 6240 cgcatctgct atagtggagg ccggggcagg aacaggttga acagtctacc ctcccttagc 6300 agggaactac tcccaccctg gagcctccgt agacctaacc atcttctcct tacacctagc 6360 aggtgtctcc tctatcttag gggccatcaa tttcatcaca acaattatca atataaaacc 6420 ccctgccata acccaatacc aaacgcccct cttcgtctga tccgtcctaa tcacagcagt 6480 cctacttctc ctatctctcc cagtcctagc tgctggcatc actatactac taacagaccg 6540 caacctcaac accaccttct tcgaccccgc cggaggagga gaccccattc tataccaaca 6600 cctattctga tttttcggtc accctgaagt ttatattctt atcctaccag gcttcggaat 6660 aatctcccat attgtaactt actactccgg gaaaaaagaa ccatttggat acataggtat 6720 ggtctgagct atgatatcaa ttggcttcct agggtttatc gtgtgagcac accatatatt 6780 tacagtagga atagacgtag acacacgagc atacttcacc tccgctacca taatcatcgc 6840 tatccccacc ggcgtcaaag tatttagctg actcgccaca ctccacggaa gcaatatgaa 6900 atgatctgct gcagtgctct gagccctagg attcatcttt cttttcaccg taggtggcct 6960 gactggcatt gtattagcaa actcatcact agacatcgta ctacacgaca cgtactacgt 7020 tgtagctcac ttccactatg tcctatcaat aggagctgta tttgccatca taggaggctt 7080 cattcactga tttcccctat tctcaggcta caccctagac caaacctacg ccaaaatcca 7140 tttcgctatc atattcatcg gcgtaaatct aactttcttc ccacaacact ttctcggcct 7200 atccggaatg ccccgacgtt actcggacta ccccgatgca tacaccacat gaaatatcct 7260 atcatctgta ggctcattca tctctctaac agcagtaata ttaataattt tcatgatttg 7320 agaagccttc gcttcgaagc gaaaagtcct aatagtagaa gaaccctcca taaacctgga 7380 gtgactatat ggatgccccc caccctacca cacattcgaa gaacccgtat acataaaatc 7440 tagacaaaaa aggaaggaat cgaacccccc aaagctggtt tcaagccaac cccatggcct 7500 ccatgacttt ttcaaaaaga tattagaaaa accatttcat aactttgtca aagttaaatt 7560 ataggctaaa tcctatatat cttaatggca catgcagcgc aagtaggtct acaagacgct 7620 acttccccta tcatagaaga gcttatcacc tttcatgatc acgccctcat aatcattttc 7680 cttatctgct tcctagtcct gtatgccctt ttcctaacac tcacaacaaa actaactaat 7740 actaacatct cagacgctca ggaaatagaa accgtctgaa ctatcctgcc cgccatcatc 7800 ctagtcctca tcgccctccc atccctacgc atcctttaca taacagacga ggtcaacgat 7860 ccctccctta ccatcaaatc aattggccac caatggtact gaacctacga gtacaccgac 7920 tacggcggac taatcttcaa ctcctacata cttcccccat tattcctaga accaggcgac 7980 ctgcgactcc ttgacgttga caatcgagta gtactcccga ttgaagcccc cattcgtata 8040 ataattacat cacaagacgt cttgcactca tgagctgtcc ccacattagg cttaaaaaca 8100 gatgcaattc caggacgtct aaaccaaacc actttcaccg ctacacgacc aggggtatac 8160 tacggtcaat gctctgaaat ctgtggagca aaccacagtt tcatgcccat cgtcctagaa 8220 ttaattcccc taaaaatctt tgaaatagga cccgtattta ccctatagca ccccctctac 8280 cccctctaga gcccactgta aagctaactt agcattaacc ttttaagtta aagattaaga 8340 gaaccaacac ctctttacag tgaaatgccc caactaaata ctaccgtatg gcccaccata 8400 attaccccca tactccttac actattcctc atcacccaac taaaaatatt aaacacaaac 8460 taccacttac ctccctcacc aaagcccata aaaataaaaa attataacaa accctgagaa 8520 ccaaaatgaa cgaaaatctg ttcgcttcat tcattgcccc cacaatccta ggcctacccg 8580 ccgcagtact gatcattcta tttccccctc tattgatccc cacctccaaa tatctcatca 8640 acaaccgact aattaccacc caacaatgac taatcaaact aacctcaaaa caaatgatag 8700 ccatacacaa cactaaagga cgaacctgat ctcttatact agtatcctta atcattttta 8760 ttgccacaac taacctcctc ggactcctac ctcactcatt tacaccaacc acccaactat 8820 ctataaacct agccatggcc atccccttat gagcgggcgc agtgattata ggctttcgct 8880 ctaagattaa aaatgcccta gcccacttct taccacaagg cacacctaca ccccttatcc 8940 ccatactagt tattatcgaa accatcagcc tactcattca accaatagcc ctggccgtac 9000 gcctaaccgc taacattact gcaggccacc tactcatgca tctaattgga agcgccaccc 9060 tagcaatatc aaccattaac cttccctcta cacttatcat cttcacaatt ctaattctac 9120 tgactatcct agaaatcgct gtcgccttaa tccaagccta cgttttcaca cttctagtaa 9180 gcctctacct gcacgacaac acataatgac ccaccaatca catgcctatc atatagtaaa 9240 acccagccca tgacccctaa caggggccct ctcagccctc ctaatgacct ccggcctagc 9300 catgtgattt cacttccact ccataacgct cctcatacta ggcctgctaa ccaacacact 9360 aaccatatac caatgatggc gcgatgtaac acgagaaagc acataccaag gccaccacac 9420 accacctgtc caaaaaggcc ttcgatacgg gataatccta tttattacct cagaagtttt 9480 tttcttcgca ggatttttct gagcctttta ccactccagc ctagccccta ccccccaact 9540 aggagggcac tggcccccaa caggcatcac cccgctaaat cccctagaag tcccactcct 9600 aaacacatcc gtattactcg catcaggagt atcaatcacc tgagctcacc atagtctaat 9660 agaaaacaac cgaaaccaaa taattcaagc actgcttatt acaattttac tgggtctcta 9720 ttttaccctc ctacaagcct cagagtactt cgaatctccc ttcaccattt ccgacggcat 9780 ctacggctca acattttttg tagccacagg cttccacgga cttcacgtca ttattggctc 9840 aactttcctc actatctgct tcatccgcca actaatattt cacttcacat ccaaacatca 9900 ctttggcttc gaagccgccg cctgatactg gcattttgta gatgtggttt gactatttct 9960 gtatgtctcc atctattgat gagggtctta ctcttttagt ataaatagta ccgttaactt 10020 ccaattaact agttttgaca acattcaaaa aagagtaata aacttcgcct taattttaat 10080 aatcaacacc ctcctagcct tactactaat aattattaca ttttgactac cacaactcaa 10140 cggctacata gaaaaatcca ccccttacga gtgcggcttc gaccctatat cccccgcccg 10200 cgtccctttc tccataaaat tcttcttagt agctattacc ttcttattat ttgatctaga 10260 aattgccctc cttttacccc taccatgagc cctacaaaca actaacctgc cactaatagt 10320 tatgtcatcc ctcttattaa tcatcatcct agccctaagt ctggcctatg agtgactaca 10380 aaaaggatta gactgagccg aattggtata tagtttaaac aaaacgaatg atttcgactc 10440 attaaattat gataatcata tttaccaaat gcccctcatt tacataaata ttatactagc 10500 atttaccatc tcacttctag gaatactagt atatcgctca cacctcatat cctccctact 10560 atgcctagaa ggaataatac tatcgctatt cattatagct actctcataa ccctcaacac 10620 ccactccctc ttagccaata ttgtgcctat tgccatacta gtttttgccg cctgcgaagc 10680 agcggtaggc ctagccctac tagtctcaat ctccaacaca tatggcctag actacgtaca 10740 taacctaaac ctactccaat gctaaaacta atcgtcccaa caattatatt actaccactg 10800 acatgactct ccaaaaaaca cataatttga atcaacacaa ccacccacag cctaattatt 10860 agcatcatcc ccctactatt ttttaaccaa atcaacaaca acctatttag ctgctcccca 10920 accttttcct ccgaccccct aacaaccccc ctcctaatac taactacctg actcctaccc 10980 ctcacaatca tggcaagcca acgccactta tccagtgaac cactatcacg aaaaaaactc 11040 tacctctcta tactaatctc cctacaaatc tccttaatta taacattcac agccacagaa 11100 ctaatcatat tttatatctt cttcgaaacc acacttatcc ccaccttggc tatcatcacc 11160 cgatgaggca accagccaga acgcctgaac gcaggcacat acttcctatt ctacacccta 11220 gtaggctccc ttcccctact catcgcacta atttacactc acaacaccct aggctcacta 11280 aacattctac tactcactct cactgcccaa gaactatcaa actcctgagc caacaactta 11340 atatgactag cttacacaat agcttttata gtaaagatac ctctttacgg actccactta 11400 tgactcccta aagcccatgt cgaagccccc atcgctgggt caatagtact tgccgcagta 11460 ctcttaaaac taggcggcta tggtataata cgcctcacac tcattctcaa ccccctgaca 11520 aaacacatag cctacccctt ccttgtacta tccctatgag gcataattat aacaagctcc 11580 atctgcctac gacaaacaga cctaaaatcg ctcattgcat actcttcaat cagccacata 11640 gccctcgtag taacagccat tctcatccaa accccctgaa gcttcaccgg cgcagtcatt 11700 ctcataatcg cccacggact tacatcctca ttactattct gcctagcaaa ctcaaactac 11760 gaacgcactc acagtcgcat cataatcctc tctcaaggac ttcaaactct actcccacta 11820 atagcttttt gatgacttct agcaagcctc gctaacctcg ccttaccccc cactattaac 11880 ctactgggag aactctctgt gctagtaacc acattctcct gatcaaatat cactctccta 11940 cttacaggac tcaacatact agtcacagcc ctatactccc tctacatatt taccacaaca 12000 caatgaggct cactcaccca ccacattaac aacataaaac cctcattcac acgagaaaac 12060 accctcatgt tcatacacct atcccccatt ctcctcctat ccctcaaccc cgacatcatc 12120 accgggtttt cctcttgtaa atatagttta accaaaacat cagattgtga atctgacaac 12180 agaggcttac gaccccttat ttaccgagaa agctcacaag aactgctaac tcatgccccc 12240 atgtctaaca acatggcttt ctcaactttt aaaggataac agctatccat tggtcttagg 12300 ccccaaaaat tttggtgcaa ctccaaataa aagtaataac catgcacact actataacca 12360 ccctaaccct gacttcccta attcccccca tccttaccac cctcgttaac cctaacaaaa 12420 aaaactcata cccccattat gtaaaatcca ttgtcgcatc cacctttatt atcagtctct 12480 tccccacaac aatattcatg tgcctagacc aagaagttat tatctcgaac tgacactgag 12540 ccacaaccca aacaacccag ctctccctaa gcttcaaact agactacttc tccataatat 12600 tcatccctgt agcattgttc gttacatggt ccatcataga attctcactg tgatatataa 12660 actcagaccc aaacattaat cagttcttca aatatctact cattttccta attaccatgc 12720 taatcttagt taccgctaac aacctattcc aactgttcat cggctgagag ggcgtaggaa 12780 ttatatcctt cttgctcatc agttgatgat acgcccgagc agatgccaac acagcagcca 12840 ttcaagcaat cctatacaac cgtatcggcg atatcggttt catcctcgcc ttagcatgat 12900 ttatcctaca ctccaactca tgagacccac aacaaatagc ccttctaaac gctaatccaa 12960 gcctcacccc actactaggc ctcctcctag cagcagcagg caaatcagcc caattaggtc 13020 tccacccctg actcccctca gccatagaag gccccacccc agtctcagcc ctactccact 13080 caagcactat agttgtagca ggagtcttct tactcatccg cttccacccc ctagcagaaa 13140 atagcccact aatccaaact ctaacactat gcttaggcgc tatcaccact ctgttcgcag 13200 cagtctgcgc ccttacacaa aatgacatca aaaaaatcgt agccttctcc acttcaagtc 13260 aactaggact catagtagtt acaatcggca tcaaccaacc acacctagca ttcctgcaca 13320 tctgtaccca cgccttcttc aaagccatac tatttatgtg ctccgggtcc atcatccaca 13380 accttaacaa tgaacaagat attcgaaaaa taggaggact actcaaaacc atacctctca 13440 cttcaacctc cctcaccatt ggcagcctag cattagcagg aatacctttc ctcacaggtt 13500 tctattccaa agaccacatc atcgaaaccg caaacatatc atacacaaac gcctgagccc 13560 tatctattac tctcatcgct acctccctga caagcgccta tagcactcga ataattcttc 13620 tcaccctaac aggtcaacct cgcttcccta cccttactaa cattaacgaa aataacccca 13680 ccctactaaa ccccattaaa cgcctggcag ccggaagcct attcgcagga tttctcatta 13740 ctaacaacat ttcccccaca tcccccttcc aaacaacaat ccccctctac ctaaaactca 13800 cagccctcgc tgtcactttc ctaggacttc taacagccct agacctcaac tacctaacca 13860 acaaacttaa aataaaatcc ccactatgca cattttattt ctccaacata ctcggattct 13920 accctagcat cacacaccgc acaatcccct atctaggcct tcttacgagc caaaacctgc 13980 ccctactcct cctagaccta acctgactag aaaagctatt acctaaaaca atttcacagc 14040 accaaatctc cacctccatc atcacctcaa cccaaaaagg cataattaaa ctttacttcc 14100 tctctttctt cttcccactc atcctaaccc tactcctaat cacataacct attcccccga 14160 gcaatctcaa ttacaatata tacaccaaca aacaatgttc aaccagtaac tactactaat 14220 caacgcccat aatcatacaa agcccccgca ccaataggat cctcccgaat caaccctggc 14280 ccctctcctt cataaattat tcagcttcct acattattaa agtttaccac aaccaccacc 14340 ccatcatact ctttcaccca cagcaccaat cctacctcca tcgctaaccc cactaaaaca 14400 ctcaccaaga cctcaacccc tgacccccat gcctcaggat actcctcaat agccatcgct 14460 gtagtatatc caaagacaac catcattccc cctaaataaa ttaaaaaaac tattaaaccc 14520 atataacctc ccccaaaatt cagaataata acacacccaa ccacaccgct aacaatcaat 14580 actaaacccc cataaatagg agaaggctta gaagaaaacc ccacaaaccc cattactaaa 14640 cccacactca acagaaataa agcatacatc attattctcg cacggactac aaccacgacc 14700 aatgatatga aaaaccatcg ttgtatttca actacaagaa caccaatgac cccaatacgc 14760 aaaattaacc ccctaataaa attaattaac cactcattca tcgacctccc caccccatcc 14820 aacatctccg catgatgaaa cttcggctca ctccttggcg cctgcctgat cctccaaatc 14880 accacaggac tattcctagc catgcactac tcaccagacg cctcaaccgc cttttcatca 14940 atcgcccaca tcactcgaga cgtaaattat ggctgaatca tccgctacct tcacgccaat 15000 ggcgcctcaa tattctttat ctgcctcttc ctacacatcg ggcgaggcct atattacgga 15060 tcatttctct actcagaaac ctgaaacatc ggcattatcc tcctgcttgc aactatagca 15120 acagccttca taggctatgt cctcccgtga ggccaaatat cattctgagg ggccacagta 15180 attacaaact tactatccgc catcccatac attgggacag acctagttca atgaatctga 15240 ggaggctact cagtagacag tcccaccctc acacgattct ttacctttca cttcatcttg 15300 cccttcatta ttgcagccct agcagcactc cacctcctat tcttgcacga aacgggatca 15360 aacaaccccc taggaatcac ctcccattcc gataaaatca ccttccaccc ttactacaca 15420 atcaaagacg ccctcggctt acttctcctc cttctctcct taataacatt aacactattc 15480 tcaccagacc tcctaggcga cccagacaat tataccctag ccaacccctt aaacacccct 15540 ccccacatca agcccgaatg atatttccta ttcgcctaca caattctccg atccgtccct 15600 aacaaactag gaggcgtcct tgccctatta ctatccatcc tcatcctagc aataatcccc 15660 atcctccata tatccaaaca acaaagcata atatttcgcc cactaagcca atcactttat 15720 tgactcctag ccgcagacct cctcattcta acctgaatcg gaggacaacc agtaagctac 15780 ccttttacca tcattggaca agtagcatcc gtactatact tcacaacaat cctaatccta 15840 ataccaacta tctccctaat tgaaaacaaa atactcaaat gggcctgtcc ttgtagtata 15900 aactaataca ccagtcttgt aaaccggaaa tgaaaacctc tttccaagga caaatcagag 15960 aaaaagtctt taactccacc attagcaccc aaagctaaga ttctaattta aactattctc 16020 tgttctttca tggggaagca gatttgggta ccacccaagt attgactcac ccatcaacaa 16080 ccgctatgta tttcgtacat tactgccagc caccatgaat attgtacggt accataaata 16140 cttgaccacc tatagtacat aaaaacccaa tccacatcaa aaccctcccc ccatgcttac 16200 aagcaagtac agcaatcaac cttcaactgt cacacatcaa ccgcaactcc aaagccaccc 16260 ctcacccact aggataccaa caaacctacc catccttaac agtacatagc acataaagcc 16320 atttaccgta catagcacat tacagtcaaa tcccttctcg tccccatgga tgacccccct 16380 cagatagggg tcccttgacc accatcctcc gtgaaatcaa tatcccgcac aagagtgcta 16440 ctctcctcgc tccgggccca taacacttgg ggttagctaa agtgaactgt atccgacatc 16500 tggttcctac ttcagggcca taaagcctaa atagcccaca cgttcccctt aaataagaca 16560 tcacgatg 16568 // ID KC345808; SV 1; circular; genomic DNA; STD; HUM; 16566 BP. XX AC KC345808; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT5_013 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16566 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16566 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; 119142f3c47e9811f566934887f12e0f. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16566 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT5_013" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="G||ana" FT /db_xref="taxon:9606" FT /haplogroup="L0d1" FT D-loop complement(join(16021..16566,1..574)) FT tRNA 575..645 FT /product="tRNA-Phe" FT rRNA 646..1599 FT /product="12S ribosomal RNA" FT tRNA 1600..1668 FT /product="tRNA-Val" FT rRNA 1669..3226 FT /product="16S ribosomal RNA" FT tRNA 3227..3301 FT /product="tRNA-Leu" FT gene 3304..4259 FT /gene="ND1" FT CDS 3304..4259 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4258..4259,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q4GRH9" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:Q4GRH9" FT /protein_id="AGD82459.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPTTISSIPPQT" FT tRNA 4260..4328 FT /product="tRNA-Ile" FT tRNA complement(4326..4397) FT /product="tRNA-Gln" FT tRNA 4399..4466 FT /product="tRNA-Met" FT gene 4467..5508 FT /gene="ND2" FT CDS 4467..5508 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5508,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82460.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5509..5573 FT /product="tRNA-Trp" FT tRNA complement(5584..5652) FT /product="tRNA-Ala" FT tRNA complement(5654..5726) FT /product="tRNA-Asn" FT tRNA complement(5758..5823) FT /product="tRNA-Cys" FT tRNA complement(5823..5888) FT /product="tRNA-Tyr" FT gene 5901..7442 FT /gene="COX1" FT CDS 5901..7442 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B1J9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B1J9" FT /protein_id="AGD82461.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7442..7513) FT /product="tRNA-Ser" FT tRNA 7515..7582 FT /product="tRNA-Asp" FT gene 7583..8266 FT /gene="COX2" FT CDS 7583..8266 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /protein_id="AGD82462.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8292..8361 FT /product="tRNA-Lys" FT gene 8363..8569 FT /gene="ATP8" FT CDS 8363..8569 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82463.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8524..9204 FT /gene="ATP6" FT CDS 8524..9204 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B185" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B185" FT /protein_id="AGD82464.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9204..9987 FT /gene="COX3" FT CDS 9204..9987 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9987,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82465.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9988..10055 FT /product="tRNA-Gly" FT gene 10056..10401 FT /gene="ND3" FT CDS 10056..10401 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10401,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82466.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWAE" FT tRNA 10402..10466 FT /product="tRNA-Arg" FT gene 10467..10763 FT /gene="ND4L" FT CDS 10467..10763 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AGD82467.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10757..12134 FT /gene="ND4" FT CDS 10757..12134 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12134,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82468.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12135..12203 FT /product="tRNA-His" FT tRNA 12204..12262 FT /product="tRNA-Ser" FT tRNA 12263..12333 FT /product="tRNA-Leu" FT gene 12334..14145 FT /gene="ND5" FT CDS 12334..14145 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q4EYP3" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q4EYP3" FT /protein_id="AGD82469.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHSLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPTSPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14146..14670) FT /gene="ND6" FT CDS complement(14146..14670) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82470.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14671..14739) FT /product="tRNA-Glu" FT gene 14744..15884 FT /gene="CYTB" FT CDS 14744..15884 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15884,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q6VJ80" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q6VJ80" FT /protein_id="AGD82471.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15885..15950 FT /product="tRNA-Thr" FT tRNA complement(15952..16020) FT /product="tRNA-Pro" XX SQ Sequence 16566 BP; 5125 A; 5176 C; 2171 G; 4094 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcgaac atacctactg aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tatttttccc tcccactccc atactactaa 480 tctcatcaat acaaccccgc ccatcctacc cagcacacac accgctgcta accccatacc 540 ccgaaccaac caaaccccaa agacaccccc cacagtttat gtagcttacc tcctcaaagc 600 aatacactga aaatgtttag acgggctcac atcaccccat aaacaaatag gtttggtcct 660 agcctttcta ttagctctta gtaagattac acatgcaagc atccccgttc cagtgaattc 720 accctctaaa tcaccacgat caaaagggac aagcatcaag cacgcaacaa tgcagctcaa 780 aacgcttagc ctagccacac ccccacggga aacagcagtg ataaaccttt agcaataaac 840 gaaagtttaa ctaagctata ctaaccccag ggttggtcaa tttcgtgcca gccaccgcgg 900 tcacacgatt aacccaagtc aatagaagcc ggcgtaaaga gtgttttaga tcaccccctc 960 cccaataaag ctaaaactca cctgagttgt aaaaaactcc agttgacaca aaataaacta 1020 cgaaagtggc tttaacatat ctgaatacac aatagctaag acccaaactg ggattagata 1080 ccccactatg cttagcccta aacctcaaca gttaaatcaa caaaactgct cgccagaaca 1140 ctacgagcca cagcttaaaa ctcaaaggac ctggcggtgc ttcatatccc tctagaggag 1200 cctgttctgt aatcgataaa ccccgatcaa cctcaccacc tcttgctcag cctatatacc 1260 gccatcttca gcaaaccctg atgaaggcta caaagtaagc gcaagtaccc acgtaaagac 1320 gttaggtcaa ggtgtagccc atgaggtggc aagaaatggg ctacattttc taccccagaa 1380 aactacgata gcccttatga aacttaaggg tcgaaggtgg atttagcagt aaactaagag 1440 tagagtgctt agttgaacag ggccctgaag cgcgtacaca ccgcccgtca ccctcctcaa 1500 gtatacttca aaggacattt aactaaaacc cctacgcatt tatatagagg agacaagtcg 1560 taacatggta agtgtactgg aaagtgcact tggacgaacc agagtgtagc ttaacacaaa 1620 gcacccaact tacacttagg agatttcaac ttaacttgac cgctctgagc taaacctagc 1680 cccaaaccca ctccacctta ctaccagaca accttagcca aaccatttac ccaaataaag 1740 tataggcgat agaaattgaa acctggcgca atagatatag taccgcaagg gaaagatgaa 1800 aaattataac caagcataat atagcaagga ctaaccccta taccttctgc ataatgaatt 1860 aactagaaat aactttgcaa ggagagccaa agctaagacc cccgaaacca gacgagctac 1920 ctaagaacag ctaaaagagc acacccgtct atgtagcaaa atagtgggaa gatttatagg 1980 tagaggcgac aaacctaccg agcctggtga tagctggttg tccaagatag aatcttagtt 2040 caactttaaa tttgcccaca gaaccctcta aatccccttg taaatttaac tgttagtcca 2100 aagaggaaca gctctttgga cactaggaaa aaaccttgta gagagagtaa aaaatttaac 2160 acccatagta ggcctaaaag cagccaccaa ttaagaaagc gttcaagctc aacacccact 2220 acctaaaaaa tcccaaacat ataactgaac tcctcacacc caattggacc aatctatcac 2280 cctatagaag aactaatgtt agtataagta acatgaaaac attctcctcc gcataagcct 2340 gcgtcagatt aaaacactga actgacaatt aacagcccaa tatctacaat caaccaacaa 2400 gtcattatta ccctcactgt caacccaaca caggcatgct cataaggaaa ggttaaaaaa 2460 agtaaaagga actcggcaaa tcttaccccg cctgtttacc aaaaacatca cctctagcat 2520 caccagtatt agaggcaccg cctgcccagt gacacatgtt taacggccgc ggtaccctaa 2580 ccgtgcaaag gtagcataat cacttgttcc ttaaataggg acctgtatga atggctccac 2640 gagggttcag ctgtctctta cttttaacca gtgaaattga cctgcccgtg aagaggcggg 2700 cataacacag caagacgaga agaccctatg gagctttaat ttattaatgc aaacaatacc 2760 taacaaaccc acaggtccta aactaccaaa cctgcattaa aaatttcggt tggggcgacc 2820 tcggagcaga acccaacctc cgagcagtac atgctaagac ttcaccagtc aaagcgaact 2880 accatactca attgatccaa taacttgacc aacggaacaa gttaccctag ggataacagc 2940 gcaatcctat tctagagtcc atatcaacaa tagggtttac gacctcgatg ttggatcagg 3000 acatcccgat ggtgcagccg ctattaaagg ttcgtttgtt caacgattaa agtcctacgt 3060 gatctgagtt cagaccggag taatccaggt cggtttctat ctacttcaaa ttcctccctg 3120 tacgaaagga caagagaaat aaggcctact tcacaaagcg ccttcccccg taaatgatat 3180 catctcaact tagtattata cccacaccca cccaagaaca gggtttgtta agatggcaga 3240 gcccggtaat cgcataaaac ttaaaacttt acagtcagag gttcaattcc tcttcttaac 3300 aacataccca tggccaacct cctactcctc attgtaccca ttctaatcgc aatggcattc 3360 ctaatgctta ccgaacgaaa aattctaggc tatatacaac tacgcaaagg ccccaacgtt 3420 gtaggcccct acggactact acaacccttc gctgacgcca taaaactctt caccaaagag 3480 cccctaaaac ccgccacatc taccatcacc ctatacatca ccgccccgac cttagctctc 3540 accatcgctc ttctactatg aacccccctc cccataccca accccctggt taacctcaac 3600 ctaggcctcc tatttattct agccacctct agcctagccg tttactcaat cctctgatca 3660 gggtgagcat caaactcaaa ctacgccctg atcggcgcac tgcgagcagt agcccaaaca 3720 atctcatatg aagtcaccct agccatcatt ctgctatcaa cattactaat aagtggctcc 3780 tttaacctct ccacccttat cacaacacaa gaacacctct gattactcct gccatcatga 3840 cccttggcca taatatgatt tatctccaca ctagcagaga ccaaccgaac ccccttcgac 3900 cttgccgaag gggagtccga actagtctca ggcttcaaca tcgaatacgc cgcaggcccc 3960 ttcgccctat tcttcatagc cgaatacaca aacattatta taataaacac cctcaccact 4020 acaatcttcc taggaacaac atatgacgca ctctcccctg aactctacac aacatatttt 4080 gtcaccaaga ccctacttct gacctccctg ttcttatgaa ttcgaacagc atacccccga 4140 ttccgctacg accaactcat acacctccta tgaaaaaact tcctaccact cactctagca 4200 ttacttatat gatatgtctc catacccact acaatctcca gcattccccc tcaaacctaa 4260 gaaatatgtc tgataaaaga gttactttga tagagtaaat aataggagtt taaaccccct 4320 tatttctagg actatgagaa tcgaacccat ccctgagaat ccaaaattct ccgtgccacc 4380 tatcacaccc catcctaaag taaggtcagc taaataagct atcgggccca taccccgaaa 4440 atgttggtta tacccttccc gtactaatta atcccctggc ccaacccgtc atctactcta 4500 ccatctttgc aggcacactc atcacagcgc taagctcgca ctgatttttt acctgagtag 4560 gcctagaaat aaacatgcta gcttttattc cagttctaac caaaaaaata aaccctcgtt 4620 ccacagaagc tgccatcaag tatttcctca cgcaagcaac cgcatccata atccttctaa 4680 tagctatcct cttcaacaat atactctccg gacaatgaac cataaccaat actaccaatc 4740 aatactcatc attaataatc ataatggcta tagcaataaa actaggaata gccccctttc 4800 acttctgagt cccagaggtt acccaaggca cccctctgac atccggcctg cttcttctca 4860 catgacaaaa actagccccc atctcaatca tataccaaat ctctccctca ctaaacgtaa 4920 gccttctcct cactctctca atcttatcca tcatagcagg cagttgaggt ggattaaacc 4980 aaacccagct acgcaaaatc ttagcatact cctcaattac ccacatagga tgaataatag 5040 cagttctacc gtacaaccct aacataacca ttcttaattt aactatttat attatcctaa 5100 ctactaccgc attcctacta ctcaacttaa actccagcac cacgacccta ctactatctc 5160 gcacctgaaa caagctaaca tgactaacac ccttaattcc atccaccctc ctctccctag 5220 gaggcctgcc cccgctaacc ggctttttgc ccaaatgggc cattatcgaa gaattcacaa 5280 aaaacaatag cctcatcatc cccaccatca tagccaccat caccctcctt aacctctact 5340 tctacctacg cctaatctac tccacctcaa tcacactact ccccatatct aacaacgtaa 5400 aaataaaatg acagtttgaa catacaaaac ccaccccact cctccccaca ctcatcgccc 5460 ttaccacgct actcctacct atctcccctt ttatactaat aatcttatag aaatttaggt 5520 taaatacaga ccaagagcct tcaaagccct cagtaagttg caatacttaa tttctgtaac 5580 agctaaggac tgcaaaaccc cactctgcat caactgaacg caaatcagcc actttaatta 5640 agctaagccc ttactagacc aatgggactt aaacccacaa acacttagtt aacagctaag 5700 caccctaatc aactggcttc aatctacttc tcccgccgcc gggaaaaaag gcgggagaag 5760 ccccggcagg tttgaagctg cttcttcgaa tttgcaattc aatatgaaaa tcacctcgga 5820 gctggtaaaa agaggcctaa cccctgtctt tagatttaca gtccaatgct tcactcagcc 5880 attttacctc acccccactg atgttcgccg accgttgact attctctaca aaccacaaag 5940 acattggaac actataccta ttattcggcg catgagctgg agtcctaggc acagctctaa 6000 gcctccttat tcgagccgag ctgggccagc caggcaacct tctaggtaac gaccacatct 6060 acaacgttat cgtcacagcc catgcatttg taataatctt cttcatagta atacccatca 6120 taatcggagg ctttggcaac tgactagttc ccctaataat cggtgccccc gatatggcgt 6180 tcccccgcat aaacaacata agcttctgac tcttacctcc ctctctccta ctcctgctcg 6240 catctgctat agtggaggcc ggggcaggaa caggttgaac agtctaccct cccttagcag 6300 ggaactactc ccaccctgga gcctccgtag acctaaccat cttctcctta cacctagcag 6360 gtgtctcctc tatcttaggg gccatcaatt tcatcacaac aattatcaat ataaaacccc 6420 ctgccataac ccaataccaa acgcccctct tcgtctgatc cgtcctaatc acagcagtcc 6480 tacttctcct atctctccca gtcctagctg ctggcatcac tatactacta acagaccgca 6540 acctcaacac caccttcttc gaccccgccg gaggaggaga ccccattcta taccaacacc 6600 tattctgatt tttcggtcac cctgaagttt atattcttat cctaccaggc ttcggaataa 6660 tctcccatat tgtaacttac tactccggaa aaaaagaacc atttggatac ataggtatgg 6720 tctgagctat gatatcaatt ggcttcctag ggtttatcgt gtgagcacac catatattta 6780 cagtaggaat agacgtagac acacgagcat acttcacctc cgctaccata atcatcgcta 6840 tccccaccgg cgtcaaagta tttagctgac tcgccacact ccacggaagc aatatgaaat 6900 gatctgctgc agtgctctga gccctgggat tcatctttct tttcaccgta ggtggcctga 6960 ctggcattgt attagcaaac tcatcactag acatcgtact acacgacacg tactacgttg 7020 tagctcactt ccactatgtc ctatcaatag gagctgtatt tgccatcata ggaggcttca 7080 ttcactgatt tcccctattc tcaggctaca ccctagacca aacctacgcc aaaatccatt 7140 tcgctatcat attcatcggc gtaaatctaa ctttcttccc acaacacttt ctcggcctat 7200 ccggaatgcc ccgacgttac tcggactacc ccgatgcata caccacatga aatatcctat 7260 catctgtagg ctcattcatt tctctaacag cagtaatatt aataattttc atgatttgag 7320 aagccttcgc ttcgaagcga aaagtcctaa tagtagaaga accctccata aacctggagt 7380 gactatatgg atgcccccca ccctaccaca cattcgaaga acccgtatac ataaaatcta 7440 gacaaaaaag gaaggaatcg aaccccccaa agctggtttc aagccaaccc catggcctcc 7500 atgacttttt caaaaagata ttagaaaaac catttcataa ctttgtcaaa gttaaattat 7560 aggctaaatc ctatatatct taatggcaca tgcagcgcaa gtaggtctac aagacgctac 7620 ttcccctatc atagaagagc ttatcacctt tcatgatcac gccctcataa tcattttcct 7680 tatctgcttc ctagtcctgt atgccctttt cctaacactc acaacaaaac taactaatac 7740 taacatctca gacgctcagg aaatagaaac cgtctgaact atcctgcccg ccatcatcct 7800 agtcctcatc gccctcccat ccctacgcat cctttacata acagacgagg tcaacgatcc 7860 ctcccttacc atcaaatcaa ttggccacca atggtactga acctacgagt acaccgacta 7920 cggcggacta atcttcaact cctacatact tcccccatta ttcctagaac caggcgacct 7980 gcgactcctt gacgttgaca atcgagtagt actcccgatt gaagccccca ttcgtataat 8040 aattacatca caagacgtct tgcactcatg agctgtcccc acattaggct taaaaacaga 8100 tgcaattcca ggacgtctaa accaaaccac tttcaccgct acacgaccag gggtatacta 8160 cggtcaatgc tctgaaatct gtggagcaaa ccacagtttc atgcccatcg tcctagaatt 8220 aattccccta aaaatctttg aaataggacc cgtatttacc ctatagcacc ccctctaccc 8280 cctctagagc ccactgtaaa gctaacttag cattaacctt ttaagttaaa gattaagaga 8340 accaacacct ctttacagtg aaatgcccca actaaatact accgtatggc ccaccataat 8400 tacccccata ctccttacac tattcctcat cacccaacta aaaatattaa acacaaacta 8460 ccacttacct ccctcaccaa agcccataaa aataaaaaat tataacaaac cctgagaacc 8520 aaaatgaacg aaaatctgtt cgcttcattc attgccccca caatcctagg cctacccgcc 8580 gcagtactga tcattctatt tccccctcta ttgatcccca cctccaaata tctcatcaac 8640 aaccgactaa ttaccaccca acaatgacta atcaaactaa cctcaaaaca aatgatagcc 8700 atacacaaca ctaaaggacg aacctgatct cttatactag tatccttaat catttttatt 8760 gccacaacta acctcctcgg actcctgcct cactcattta caccaaccac ccaactatct 8820 ataaacctag ccatggccat ccccttatga gcgggcgcag tgattatagg ctttcgctct 8880 aagattaaaa atgccctagc ccacttctta ccacaaggca cacctacacc ccttatcccc 8940 atactagtta ttatcgaaac catcagccta ctcattcaac caatagccct ggccgtacgc 9000 ctaaccgcta acattactgc aggccaccta ctcatgcatc taattggaag cgccacccta 9060 gcaatatcaa ccattaacct tccctctaca cttatcatct tcacaattct aattctactg 9120 actatcctag aaatcgctgt cgccttgatc caagcctacg ttttcacact tctagtaagc 9180 ctctacctgc acgacaacac ataatgaccc accaatcaca tgcctatcat atagtaaaac 9240 ccagcccatg acccctaaca ggggccctct cagccctcct aatgacctcc ggcctagcca 9300 tgtgatttca cttccactcc ataacgctcc tcatactagg cctgctaacc aacacactaa 9360 ccatatacca atgatggcgc gatgtaacac gagaaagcac ataccaaggc caccacacac 9420 cacctgtcca aaaaggcctt cgatacggga taatcctatt tattacctca gaagtttttt 9480 tcttcgcagg atttttctga gccttttacc actccagcct agcccctacc ccccaactag 9540 gagggcactg gcccccaaca ggcatcaccc cgctaaatcc cctagaagtc ccactcctaa 9600 acacatccgt attactcgca tcaggagtat caatcacctg agctcaccat agtctaatag 9660 aaaacaaccg aaaccaaata attcaagcac tgcttattac aattttactg ggtctctatt 9720 ttaccctcct acaagcctca gagtacttcg aatctccctt caccatttcc gacggcatct 9780 acggctcaac attttttgta gccacaggct tccacggact tcacgtcatt attggctcaa 9840 ctttcctcac tatctgcttc atccgccaac taatatttca ctttacatcc aaacatcact 9900 ttggcttcga agccgccgcc tgatactggc attttgtaga tgtggtttga ctatttctgt 9960 atgtctccat ctattgatga gggtcttact cttttagtat aaatagtacc gttaacttcc 10020 aattaactag ttttgacaac attcaaaaaa gagtaataaa cttcgcctta attttaataa 10080 tcaacaccct cctagcctta ctactaataa ttattacatt ttgactacca caactcaacg 10140 gctacataga aaaatccacc ccttacgagt gcggcttcga ccctatatcc cccgcccgcg 10200 tccctttctc cataaaattc ttcttagtag ctattacctt cttattattt gatctagaaa 10260 ttgccctcct tttaccccta ccatgagccc tacaaacaac taacctgcca ctaatagtta 10320 tgtcatccct cttattaatc atcatcctag ccctaagtct ggcctatgag tgactacaaa 10380 aaggattaga ctgagccgaa ttggtatata gtttaaacaa aacgaatgat ttcgactcat 10440 taaattatga taatcatatt taccaaatgc ccctcattta cataaatatt atactagcat 10500 ttaccatctc acttctagga atactagtat atcgctcaca cctcatatcc tccctactat 10560 gcctagaagg aataatacta tcgctattca ttatagctac tctcataacc ctcaacaccc 10620 actccctctt agccaatatt gtgcctattg ccatactagt ttttgccgcc tgcgaagcag 10680 cggtaggcct agccctacta gtctcaatct ccaacacata tggcctagac tacgtacata 10740 acctaaacct actccaatgc taaaactaat cgtcccaaca attatattac taccactgac 10800 atgactctcc aaaaaacaca taatttgaat caacacaacc acccacagcc taattattag 10860 catcatcccc ctactatttt ttaaccaaat caacaacaac ctatttagct gctccccaac 10920 cttttcctcc gaccccctaa caacccccct cctaatacta actacctgac tcctacccct 10980 cacaatcatg gcaagccaac gccacttatc cagtgaacca ctatcacgaa aaaaactcta 11040 cctctctata ctaatctccc tacaaatctc cttaattata acattcacag ccacagaact 11100 aatcatattt tatatcttct tcgaaaccac acttatcccc accttggcta tcatcacccg 11160 atgaggcaac cagccagaac gcctgaacgc aggcacatac ttcctattct acaccctagt 11220 aggctccctt cccctactca tcgcactaat ttacactcac aacaccctag gctcactaaa 11280 cattctacta ctcactctca ctgcccaaga actatcaaac tcctgagcca acaacttaat 11340 atgactagct tacacaatag cttttatagt aaagatacct ctttacggac tccacttatg 11400 actccctaaa gcccatgtcg aagcccccat cgccgggtca atagtacttg ccgcagtact 11460 cttaaaacta ggcggctatg gtataatacg cctcacactc attctcaacc ccctgacaaa 11520 acacatagcc taccccttcc ttgtactatc cctatgaggc ataattataa caagctccat 11580 ctgcctacga caaacagacc taaaatcgct cattgcatac tcttcaatca gccacatagc 11640 cctcgtagta acagccattc tcatccaaac cccctgaagc ttcaccggcg cagtcattct 11700 cataatcgcc cacggactta catcctcatt actattctgc ctagcaaact caaactacga 11760 acgcactcac agtcgcatca taatcctctc tcaaggactt caaactctac tcccactaat 11820 agctttttga tgacttctag caagcctcgc taacctcgcc ttacccccca ctattaacct 11880 actgggagaa ctctctgtgc tagtaaccac attctcctga tcaaatatca ctctcctact 11940 tacaggactc aacatactag tcacagccct atactccctc tacatattta ccacaacaca 12000 atgaggctca ctcacccacc acattaacaa cataaaaccc tcattcacac gagaaaacac 12060 cctcatgttc atacacctat cccccattct cctcctatcc ctcaaccccg acatcatcac 12120 cgggttttcc tcttgtaaat atagtttaac caaaacatca gattgtgaat ctgacaacag 12180 aggcttacga ccccttattt accgagaaag ctcacaagaa ctgctaactc acgcccccat 12240 gtctaacaac atggctttct caacttttaa aggataacag ctatccattg gtcttaggcc 12300 ccaaaaattt tggtgcaact ccaaataaaa gtaataacca tgcacactac tataaccacc 12360 ctaaccctga cttccctaat tccccccatc cttaccaccc tcgttaaccc taacaaaaaa 12420 aactcatacc cccattatgt aaaatccatt gtcgcatcca cctttattat cagtctcttc 12480 cccacaacaa tattcatgtg cctagaccaa gaagttatta tctcgaactg acactgagcc 12540 acaacccaaa caacccagct ctccctaagc ttcaaactag actacttctc cataatattc 12600 atccctgtag cattgttcgt tacatggtcc atcatagaat tctcactgtg atatataaac 12660 tcagacccaa acattaatca gttcttcaaa tatctactca ttttcctaat taccatgcta 12720 atcttagtta ccgctaacaa cctattccaa ctgttcatcg gctgagaggg cgtaggaatt 12780 atatccttct tgctcatcag ttgatgatac gcccgagcag atgccaacac agcagccatt 12840 caagcaatcc tatacaaccg tatcggcgat atcggtttca tcctcgcctt agcatgattt 12900 atcctacact ccaactcatg agacccacaa caaatagccc ttctaaacgc taatccaagc 12960 ctcaccccac tactaggcct cctcctagca gcagcaggca aatcagccca attaggtctc 13020 cacccctgac tcccctcagc catagaaggc cccaccccag tctcagccct actccactca 13080 agcactatag ttgtagcagg agtcttctta ctcatccgct tccactccct agcagaaaat 13140 agcccactaa tccaaactct aacactatgc ttaggcgcta tcaccactct gttcgcagca 13200 gtctgcgccc ttacacaaaa tgacatcaaa aaaatcgtag ccttctccac ttcaagtcaa 13260 ctaggactca tagtagttac aatcggcatc aaccaaccac acctagcatt cctgcacatc 13320 tgtacccacg ccttcttcaa agccatacta tttatgtgct ccgggtccat catccacaac 13380 cttaacaatg aacaagatat tcgaaaaata ggaggactac tcaaaaccat acctctcact 13440 tcaacctccc tcaccattgg cagcctagca ttagcaggaa tacctttcct cacaggtttc 13500 tattccaaag accacatcat cgaaaccgca aacatatcat acacaaacgc ctgagcccta 13560 tctattactc tcatcgctac ctccctgaca agcgcctata gcactcgaat aattcttctc 13620 accctaacag gtcaacctcg cttccctacc cttactaaca ttaacgaaaa taaccccacc 13680 ctactaaacc ccattaaacg cctggcagcc ggaagcctat tcgcaggatt tctcattact 13740 aacaacattt cccccacatc ccccttccaa acaacaatcc ccctctacct aaaactcaca 13800 gccctcgctg tcactttcct aggacttcta acagccctag acctcaacta cctaaccaac 13860 aaacttaaaa taaaatcccc actatgcaca ttttatttct ccaacatact cggattctac 13920 cctagcatca cacaccgcac aatcccctat ctaggccttc ttacgagcca aaacctgccc 13980 ctactcctcc tagacctaac ctgactagaa aagctattac ctaaaacaat ttcacagcac 14040 caaatctcca cctccatcat cacctcaacc caaaaaggca taattaaact ttacttcctc 14100 tctttcttct tcccactcat cctaacccta ctcctaatca cataacctat tcccccgagc 14160 aatctcaatt acaatatata caccaacaaa caatgttcaa ccagtaacta ctactaatca 14220 acgcccataa tcatacaaag cccccgcacc aataggatcc tcccgaatca accctgaccc 14280 ctctccttca taaattattc agcttcctac actattaaag tttaccacaa ccaccacccc 14340 atcatactct ttcacccaca gcaccaatcc tacctccatc gctaacccca ctaaaacact 14400 caccaagacc tcaacccctg acccccatgc ctcaggatac tcctcaatag ccatcgctgt 14460 agtatatcca aagacaacca tcattccccc taaataaatt aaaaaaacta ttaaacccat 14520 ataacctccc ccaaaattca gaataataac acacccgacc acaccgctaa caatcaatac 14580 taaaccccca taaataggag aaggcttaga agaaaacccc acaaacccca ttactaaacc 14640 cacactcaac agaaacaaag catacatcat tattctcgca cggactacaa ccacgaccaa 14700 tgatatgaaa aaccatcgtt gtatttcaac tacaagaaca ccaatgaccc caatacgcaa 14760 aattaacccc ctaataaaat taattaacca ctcattcatc gacctcccca ccccatccaa 14820 catctccgca tgatgaaact tcggctcact ccttggcgcc tgcctgatcc tccaaatcac 14880 cacaggacta ttcctagcca tgcactactc accagacgcc tcaaccgcct tttcatcaat 14940 cgcccacatc actcgagacg taaattatgg ctgaatcatc cgctaccttc acgccaatgg 15000 cgcctcaata ttctttatct gcctcttcct acacatcggg cgaggcctat attacggatc 15060 atttctctac tcagaaacct gaaacatcgg cattatcctc ctgcttgcaa ctatagcaac 15120 agccttcata ggctatgtcc tcccgtgagg ccaaatatca ttctgagggg ccacagtaat 15180 tacaaactta ctatccgcca tcccatacat tgggacagac ctagttcaat gaatctgagg 15240 aggctactca gtagacagtc ccaccctcac acgattcttt acctttcact tcatcttgcc 15300 cttcattatt gcagccctag cagcactcca cctcctattc ttgcacgaaa cgggatcaaa 15360 caacccccta ggaatcacct cccattccga taaaatcacc ttccaccctt actacacaat 15420 caaagacgcc ctcggcttac ttctcttcct tctctcctta ataacattaa cactattctc 15480 accagacctc ctaggcgacc cagacaatta taccctagcc aaccccttaa acacccctcc 15540 ccacatcaag cccgaatgat atttcctatt cgcctacaca attctccgat ccgtccctaa 15600 caaactagga ggcgtccttg ccctattact atccatcctc atcctagcaa taatccccat 15660 cctccatata tccaaacaac aaagcataat atttcgccca ctaagccaat cactttattg 15720 actcctagcc gcagacctcc tcattctaac ctgaatcgga ggacaaccag taagctaccc 15780 ttttaccatc attggacaag tagcatccgt actatacttc acaacaatcc taatcctaat 15840 accaactatc tccctaattg aaaacaaaat actcaaatgg gcctgtcctt gtagtataaa 15900 ctaatacacc agtcttgtaa accggaaatg aaaacctctt tccaagggca aatcagagaa 15960 aaagtcttta actccaccat tagcacccaa agctaagatt ctaatttaaa ctattctctg 16020 ttctttcatg gggaagcaga tttgggtacc acccaagtat tgactcaccc atcaacaacc 16080 gctatgtatt tcgtacatta ctgccagcca ccatgaatat tgtacggtac cataaatact 16140 tgaccacctg tagtacataa aaacccaatc cacatcaaaa ccctcccccc atgcttacaa 16200 gcaagtacag caatcaacct tcaactgtca tacatcaacc gcaactccaa agtcacccct 16260 cacccactag gataccaaca aacctaccca accttaacag tacatagcac ataaagccat 16320 ttaccgtaca tagcacatta cagtcaaatc ccttctcgtc cccatggatg acccccctca 16380 gataggggtc ccttgaccac catcctccgt gaaatcaata tcccgcacaa gagtgctact 16440 ctcctcgctc cgggcccata acacttgggg gtagctaaag tgaactgtat ccgacatctg 16500 gttcctactt cagggtcata aagcctaaat agcccacacg ttccccttaa ataagacatc 16560 acgatg 16566 // ID KC345809; SV 1; circular; genomic DNA; STD; HUM; 16568 BP. XX AC KC345809; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT5_018 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16568 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16568 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; 364bd4eee0edc254e2a26ea6e7c04b04. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16568 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT5_018" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="G||ana" FT /db_xref="taxon:9606" FT /haplogroup="L0d1" FT D-loop complement(join(16023..16568,1..576)) FT tRNA 577..647 FT /product="tRNA-Phe" FT rRNA 648..1601 FT /product="12S ribosomal RNA" FT tRNA 1602..1670 FT /product="tRNA-Val" FT rRNA 1671..3228 FT /product="16S ribosomal RNA" FT tRNA 3229..3303 FT /product="tRNA-Leu" FT gene 3306..4261 FT /gene="ND1" FT CDS 3306..4261 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4260..4261,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q4GRH9" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:Q4GRH9" FT /protein_id="AGD82472.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPTTISSIPPQT" FT tRNA 4262..4330 FT /product="tRNA-Ile" FT tRNA complement(4328..4399) FT /product="tRNA-Gln" FT tRNA 4401..4468 FT /product="tRNA-Met" FT gene 4469..5510 FT /gene="ND2" FT CDS 4469..5510 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5510,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82473.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5511..5575 FT /product="tRNA-Trp" FT tRNA complement(5586..5654) FT /product="tRNA-Ala" FT tRNA complement(5656..5728) FT /product="tRNA-Asn" FT tRNA complement(5760..5825) FT /product="tRNA-Cys" FT tRNA complement(5825..5890) FT /product="tRNA-Tyr" FT gene 5903..7444 FT /gene="COX1" FT CDS 5903..7444 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B1J9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B1J9" FT /protein_id="AGD82474.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7444..7515) FT /product="tRNA-Ser" FT tRNA 7517..7584 FT /product="tRNA-Asp" FT gene 7585..8268 FT /gene="COX2" FT CDS 7585..8268 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /protein_id="AGD82475.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8294..8363 FT /product="tRNA-Lys" FT gene 8365..8571 FT /gene="ATP8" FT CDS 8365..8571 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82476.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8526..9206 FT /gene="ATP6" FT CDS 8526..9206 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B185" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B185" FT /protein_id="AGD82477.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9206..9989 FT /gene="COX3" FT CDS 9206..9989 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9989,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AGD82478.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9990..10057 FT /product="tRNA-Gly" FT gene 10058..10403 FT /gene="ND3" FT CDS 10058..10403 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10403,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82479.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWAE" FT tRNA 10404..10468 FT /product="tRNA-Arg" FT gene 10469..10765 FT /gene="ND4L" FT CDS 10469..10765 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AGD82480.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10759..12136 FT /gene="ND4" FT CDS 10759..12136 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12136,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82481.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12137..12205 FT /product="tRNA-His" FT tRNA 12206..12264 FT /product="tRNA-Ser" FT tRNA 12265..12335 FT /product="tRNA-Leu" FT gene 12336..14147 FT /gene="ND5" FT CDS 12336..14147 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q4F0F4" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q4F0F4" FT /protein_id="AGD82482.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPTSPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14148..14672) FT /gene="ND6" FT CDS complement(14148..14672) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /db_xref="GOA:Q4F0B4" FT /db_xref="InterPro:IPR001457" FT /db_xref="UniProtKB/TrEMBL:Q4F0B4" FT /protein_id="AGD82483.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNNVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14673..14741) FT /product="tRNA-Glu" FT gene 14746..15886 FT /gene="CYTB" FT CDS 14746..15886 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15886,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:F1AJX2" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:F1AJX2" FT /protein_id="AGD82484.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMVFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15887..15952 FT /product="tRNA-Thr" FT tRNA complement(15954..16022) FT /product="tRNA-Pro" XX SQ Sequence 16568 BP; 5131 A; 5183 C; 2165 G; 4089 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcgaac atacctacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct cccccgcttc tggccacagc acttaaacac atctctgcca aaccccaaaa 360 acaaagaacc ctaacaccag cctaaccaga tttcaaattt tatcttttgg cggtatgcac 420 ttttaacagt caccccccaa ctaacacatt attttcccct cccactccca tactactaat 480 ctcatcaata caaccccgcc catcctaccc agcacacaca caccgctgct aaccccatac 540 cccgaaccaa ccaaacccca aagacacccc cccacagttt atgtagctta cctcctcaaa 600 gcaatacact gaaaatgttt agacgggctc acatcacccc ataaacaaat aggtttggtc 660 ctagcctttc tattagctct tagtaagatt acacatgcaa gcatccccgt tccagtgaat 720 tcaccctcta aatcaccacg atcaaaaggg acaagcatca agcacgcaac aatgcagctc 780 aaaacgctta gcctagccac acccccacgg gaaacagcag tgataaacct ttagcaataa 840 acgaaagttt aactaagcta tactaacccc agggttggtc aatttcgtgc cagccaccgc 900 ggtcacacga ttaacccaag tcaatagaag ccggcgtaaa gagtgtttta gatcaccccc 960 tccccaataa agctaaaact cacctgagtt gtaaaaaact ccagttgaca caaaataaac 1020 tacgaaagtg gctttaacat atctgaatac acaatagcta agacccaaac tgggattaga 1080 taccccacta tgcttagccc taaacctcaa cagttaaatc aacaaaactg ctcgccagaa 1140 cactacgagc cacagcttaa aactcaaagg acctggcggt gcttcatatc cctctagagg 1200 agcctgttct gtaatcgata aaccccgatc aacctcacca cctcttgctc agcctatata 1260 ccgccatctt cagcaaaccc tgatgaaggc tacaaagtaa gcgcaagtac ccacgtaaag 1320 acgttaggtc aaggtgtagc ccatgaggtg gcaagaaatg ggctacattt tctaccccag 1380 aaaactacga tagcccttat gaaacttaag ggtcgaaggt ggatttagca gtaaactaag 1440 agtagagtgc ttagttgaac agggccctga agcgcgtaca caccgcccgt caccctcctc 1500 aagtatactt caaaggacat ttaactaaaa cccctacgca tttatataga ggagacaagt 1560 cgtaacatgg taagtgtact ggaaagtgca cttggacgaa ccagagtgta gcttaacaca 1620 aagcacccaa cttacactta ggagatttca acttaacttg accgctctga gctaaaccta 1680 gccccaaacc cactccacct tactaccaga caaccttagc caaaccattt acccaaataa 1740 agtataggcg atagaaattg aaacctggcg caatagatat agtaccgcaa gggaaagatg 1800 aaaaattata accaagcata atatagcaag gactaacccc tataccttct gcataatgaa 1860 ttaactagaa ataactttgc aaggagagcc aaagctaaga cccccgaaac cagacgagct 1920 acctaagaac agctaaaaga gcacacccgt ctatgtagca aaatagtggg aagatttata 1980 ggtagaggcg acaaacctac cgagcctggt gatagctggt tgtccaagat agaatcttag 2040 ttcaacttta aatttgccca cagaaccctc taaatcccct tgtaaattta actgttagtc 2100 caaagaggaa cagctctttg gacactagga aaaaaccttg tagagagagt aaaaaattta 2160 acacccatag taggcctaaa agcagccacc aattaagaaa gcgttcaagc tcaacaccca 2220 ctacctaaaa aatcccaaac atataactga actcctcaca cccaattgga ccaatctatc 2280 accctataga agaactaatg ttagtataag taacatgaaa acattctcct ccgcataagc 2340 ctgcgtcaga ttaaaacact gaactgacaa ttaacagccc aatatctaca atcaaccaac 2400 aagtcattat taccctcact gtcaacccaa cacaggcatg ctcataagga aaggttaaaa 2460 aaagtaaaag gaactcggca aatcttaccc cgcctgttta ccaaaaacat cacctctagc 2520 atcaccagta ttagaggcac cgcctgccca gtgacacatg tttaacggcc gcggtaccct 2580 aaccgtgcaa aggtagcata atcacttgtt ccttaaatag ggacctgtat gaatggctcc 2640 acgagggttc agctgtctct tacttttaac cagtgaaatt gacctgcccg tgaagaggcg 2700 ggcataacac agcaagacga gaagacccta tggagcttta atttattaat gcaaacaata 2760 cctaacaaac ccacaggtcc taaactacca aacctgcatt aaaaatttcg gttggggcga 2820 cctcggagca gaacccaacc tccgagcagt acatgctaag acttcaccag tcaaagcgaa 2880 ctaccacact caattgatcc aataacttga ccaacggaac aagttaccct agggataaca 2940 gcgcaatcct attctagagt ccatatcaac aatagggttt acgacctcga tgttggatca 3000 ggacatcccg atggtgcagc cgctattaaa ggttcgtttg ttcaacgatt aaagtcctac 3060 gtgatctgag ttcagaccgg agtaatccag gtcggtttct atctacttca aattcctccc 3120 tgtacgaaag gacaagagaa ataaggccta cttcacaaag cgccttcccc cgtaaatgat 3180 atcatctcaa cttagtatta tacccacacc cacccaagaa cagggtttgt taagatggca 3240 gagcccggta atcgcataaa acttaaaact ttacagtcag aggttcaatt cctcttctta 3300 acaacatacc catggccaac ctcctactcc tcattgtacc cattctaatc gcaatggcat 3360 tcctaatgct taccgaacga aaaattctag gctatataca actacgcaaa ggccccaacg 3420 ttgtaggccc ctacggacta ctacaaccct tcgctgacgc cataaaactc ttcaccaaag 3480 agcccctaaa acccgccaca tctaccatca ccctatacat caccgccccg accttagctc 3540 tcaccatcgc tctcctacta tgaacccccc tccccatacc caaccccctg gttaacctca 3600 acctaggcct cctattcatt ctagccacct ctagcctagc cgtttactca atcctctgat 3660 cagggtgagc atcaaactca aactacgccc tgatcggcgc actgcgagca gtagcccaaa 3720 caatctcata tgaagtcacc ctagccatca ttctgctatc aacattacta ataagtggct 3780 cctttaacct ctccaccctt atcacaacac aagaacacct ctgattactc ctgccatcat 3840 gacccttggc cataatatga tttatctcca cactagcaga gaccaaccga acccccttcg 3900 accttgccga aggggagtcc gaactagtct caggcttcaa catcgaatac gccgcaggcc 3960 ccttcgccct attcttcata gccgaataca caaacattat tataataaac accctcacca 4020 ctacaatctt cctaggaaca acatatgacg cactctcccc tgaactctac acaacatatt 4080 ttgtcaccaa gaccctactt ctgacctccc tgttcttatg aattcgaaca gcataccccc 4140 gattccgcta cgaccaactc atacacctcc tatgaaaaaa cttcctacca ctcaccctag 4200 cattacttat atgatatgtc tccataccca ctacaatctc cagcattccc cctcaaacct 4260 aagaaatatg tctgataaaa gagttacttt gatagagtaa ataataggag tttaaacccc 4320 cttatttcta ggactatgag aatcgaaccc atccctgaga atccaaaatt ctccgtgcca 4380 cctatcacac cccatcctaa agtaaggtca gctaaataag ctatcgggcc cataccccga 4440 aaatgttggt tatacccttc ccgtactaat taatcccctg gcccaacccg tcatctactc 4500 taccatcttt gcaggcacac tcatcacagc gctaagctcg cactgatttt ttacctgagt 4560 aggcctagaa ataaacatgc tagcttttat tccagttcta accaaaaaaa taaaccctcg 4620 ttccacagaa gctgccatca agtatttcct cacgcaagca accgcatcca taatccttct 4680 aatagctatc ctcttcaaca atatactctc cggacaatga accataacca atactaccaa 4740 tcaatactca tcattaataa tcataatggc tatagcaata aaactaggaa tagccccctt 4800 tcacttctga gtcccagagg ttacccaagg cacccctctg acatccggcc tgcttcttct 4860 cacatgacaa aaactagccc ccatctcaat catataccaa atctctccct cactaaacgt 4920 aagccttctc ctcactctct caatcttatc catcatagca ggcagttgag gtggattaaa 4980 ccaaacccag ctacgcaaaa tcttagcata ctcctcaatt acccacatag gatgaataat 5040 agcagttcta ccgtacaacc ctaacataac cattcttaat ttaactattt atattatcct 5100 aactactacc gcattcctac tactcaactt aaactccagc accacgaccc tactactatc 5160 tcgcacctga aacaagctaa catgactaac acccttaatt ccatccaccc tcctctccct 5220 aggaggcctg cccccgctaa ccggcttttt gcccaaatgg gccattatcg aagaattcac 5280 aaaaaacaat agcctcatca tccccaccat catagccacc atcaccctcc ttaacctcta 5340 cttctaccta cgcctaatct actccacctc aatcacacta ctccccatat ctaacaacgt 5400 aaaaataaaa tgacagtttg aacatacaaa acccacccca ctcctcccca cactcatcgc 5460 ccttaccacg ctactcctac ctatctcccc ttttatacta ataatcttat agaaatttag 5520 gttaaataca gaccaagagc cttcaaagcc ctcagtaagt tgcaatactt aatttctgta 5580 acagctaagg actgcaaaac cccactctgc atcaactgaa cgcaaatcag ccactttaat 5640 taagctaagc ccttactaga ccaatgggac ttaaacccac aaacacttag ttaacagcta 5700 agcaccctaa tcaactggct tcaatctact tctcccgccg ccgggaaaaa aggcgggaga 5760 agccccggca ggtttgaagc tgcttcttcg aatttgcaat tcaatatgaa aatcacctcg 5820 gagctggtaa aaagaggcct aacccctgtc tttagattta cagtccaatg cttcactcag 5880 ccattttacc tcacccccac tgatgttcgc cgaccgttga ctattctcta caaaccacaa 5940 agacattgga acactatacc tattattcgg cgcatgagct ggagtcctag gcacagctct 6000 aagcctcctt attcgagccg agctgggcca gccaggcaac cttctaggta acgaccacat 6060 ctacaacgtt atcgtcacag cccatgcatt tgtaataatc ttcttcatag taatacccat 6120 cataatcgga ggctttggca actgactagt tcccctaata atcggtgccc ccgatatggc 6180 gttcccccgc ataaacaaca taagcttctg actcttacct ccctctctcc tactcctgct 6240 cgcatctgct atagtggagg ccggggcagg aacaggttga acagtctacc ctcccttagc 6300 agggaactac tcccaccctg gagcctccgt agacctaacc atcttctcct tacacctagc 6360 aggtgtctcc tctatcttag gggccatcaa tttcatcaca acaattatca atataaaacc 6420 ccctgccata acccaatacc aaacgcccct cttcgtctga tccgtcctaa tcacagcagt 6480 cctacttctc ctatctctcc cagtcctagc tgctggcatc actatactac taacagaccg 6540 caacctcaac accaccttct tcgaccccgc cggaggagga gaccccattc tataccaaca 6600 cctattctga tttttcggtc accctgaagt ttatattctt atcctaccag gcttcggaat 6660 aatctcccat attgtaactt actactccgg aaaaaaagaa ccatttggat acataggtat 6720 ggtctgagct atgatatcaa ttggcttcct agggtttatc gtgtgagcac accatatatt 6780 tacagtagga atagacgtag acacacgagc atacttcacc tccgctacca taatcatcgc 6840 tatccccacc ggcgtcaaag tatttagctg actcgccaca ctccacggaa gcaatatgaa 6900 atgatctgct gcagtgctct gagccctagg attcatcttt cttttcaccg taggtggcct 6960 gactggcatt gtattagcaa actcatcact agacatcgta ctacacgaca cgtactacgt 7020 tgtagctcac ttccactatg tcctatcaat aggagctgta tttgccatca taggaggctt 7080 cattcactga tttcccctat tctcaggcta caccctagac caaacctacg ccaaaatcca 7140 tttcgctatc atattcatcg gcgtaaatct aactttcttc ccacaacact ttctcggcct 7200 atccggaatg ccccgacgtt actcggacta ccccgatgca tacaccacat gaaatatcct 7260 atcatctgta ggctcattca tctctctaac agcagtaata ttaataattt tcatgatttg 7320 agaagccttc gcttcgaagc gaaaagtcct aatagtagaa gaaccctcca taaacctgga 7380 gtgactatat ggatgccccc caccctacca cacattcgaa gaacccgtat acataaaatc 7440 tagacaaaaa aggaaggaat cgaacccccc aaagctggtt tcaagccaac cccatggcct 7500 ccatgacttt ttcaaaaaga tattagaaaa accatttcat aactttgtca aagttaaatt 7560 ataggctaaa tcctatatat cttaatggca catgcagcgc aagtaggtct acaagacgct 7620 acttccccta tcatagaaga gcttatcacc tttcatgatc acgccctcat aatcattttc 7680 cttatctgct tcctagtcct gtatgccctt ttcctaacac tcacaacaaa actaactaat 7740 actaacatct cagacgctca ggaaatagaa accgtctgaa ctatcctgcc cgccatcatc 7800 ctagtcctca tcgccctccc atccctacgc atcctttaca taacagacga ggtcaacgat 7860 ccctccctta ccatcaaatc aattggccac caatggtact gaacctacga gtacaccgac 7920 tacggcggac taatcttcaa ctcctacata cttcccccat tattcctaga accaggcgac 7980 ctgcgactcc ttgacgttga caatcgagta gtactcccga ttgaagcccc cattcgtata 8040 ataattacat cacaagacgt cttgcactca tgagctgtcc ccacattagg cttaaaaaca 8100 gatgcaattc caggacgtct aaaccaaacc actttcaccg ctacacgacc aggggtatac 8160 tacggtcaat gctctgaaat ctgtggagca aaccacagtt tcatgcccat cgtcctagaa 8220 ttaattcccc taaaaatctt tgaaatagga cccgtattta ccctatagca ccccctctac 8280 cccctctaga gcccactgta aagctaactt agcattaacc ttttaagtta aagattaaga 8340 gaaccaacac ctctttacag tgaaatgccc caactaaata ccaccgtatg gcccaccata 8400 attaccccca tactccttac actattcctc atcacccaac taaaaatatt aaacacaaac 8460 taccacttac ctccctcacc aaagcccata aaaataaaaa attataacaa accctgagaa 8520 ccaaaatgaa cgaaaatctg ttcgcttcat tcattgcccc cacaatccta ggcctacccg 8580 ccgcagtact gatcattcta tttccccctc tattgatccc cacctccaaa tatctcatca 8640 acaaccgact aattaccacc caacaatgac taatcaaact aacctcaaaa caaatgatag 8700 ccatacacaa cactaaagga cgaacctgat ctcttatact agtatcctta atcattttta 8760 ttgccacaac taacctcctc ggactcctgc ctcactcatt tacaccaacc acccaactat 8820 ctataaacct agccatggcc atccccttat gagcgggcgc agtgattata ggctttcgct 8880 ctaagattaa aaatgcccta gcccacttct taccacaagg cacacctaca ccccttatcc 8940 ccatactagt tattatcgaa accatcagcc tactcattca accaatagcc ctggccgtac 9000 gcctaaccgc taacattact gcaggccacc tactcatgca tctaattgga agcgccaccc 9060 tagcaatatc aaccattaac cttccctcta cacttatcat cttcacaatt ctaattctac 9120 tgactatcct agaaatcgct gtcgccttaa tccaagccta cgttttcaca cttctagtaa 9180 gcctctacct gcacgacaac acataatgac ccaccaatca catgcctatc atatagtaaa 9240 acccagccca tgacccctaa caggggccct ctcagccctc ctaatgacct ccggcctagc 9300 catgtgattt cacttccact ccataacgct cctcatacta ggcctgctaa ccaacacact 9360 aaccatatac caatgatggc gcgatgtaac acgagaaagc acataccaag gccaccacac 9420 accacctgtc caaaaaggcc ttcgatacgg gataatccta tttattacct cagaagtttt 9480 tttcttcgca ggatttttct gagcctttta ccactccagc ctagccccta ccccccaact 9540 aggagggcac tggcccccaa caggcatcac cccgctaaat cccctagaag tcccactcct 9600 aaacacatcc gtattactcg catcaggagt atcaatcacc tgagctcacc atagtctaat 9660 agaaaacaac cgaaaccaaa taattcaagc actgcttatt acaattttac tgggtctcta 9720 ttttaccctc ctacaagcct cagagtactt cgaatctccc ttcaccattt ccgacggcat 9780 ctacggctca acattttttg tagccacagg cttccacgga cttcacgtca ttattggctc 9840 aactttcctc actatctgct tcatccgcca actaatattt cactttacat ccaaacatca 9900 ctttggcttc gaagccgccg cctgatactg gcattttgta gatgtggttt gactatttct 9960 gtatgtctcc atctattgat gagggtctta ctcttttagt ataaatagta ccgttaactt 10020 ccaattaact agttttgaca acattcaaaa aagagtaata aacttcgcct taattttaat 10080 aatcaacacc ctcctagcct tactactaat aattattaca ttttgactac cacaactcaa 10140 cggctacata gaaaaatcca ccccttacga gtgcggcttc gaccctatat cccccgcccg 10200 cgtccctttc tccataaaat tcttcttagt agctattacc ttcttattat ttgatctaga 10260 aattgccctc cttttacccc taccatgagc cctacaaaca actaacctgc cactaatagt 10320 tatgtcatcc ctcttattaa tcatcatcct agccctaagt ctggcctatg agtgactaca 10380 aaaaggatta gactgagccg aattggtata tagtttaaac aaaacgaatg atttcgactc 10440 attaaattat gataatcata tttaccaaat gcccctcatt tacataaata ttatactagc 10500 atttaccatc tcacttctag gaatactagt atatcgctca cacctcatat cctccctact 10560 atgcctagaa ggaataatac tatcgctatt cattatagct actctcataa ccctcaacac 10620 ccactccctc ttagccaata ttgtgcctat tgccatacta gtttttgccg cctgcgaagc 10680 agcggtaggc ctagccctac tagtctcaat ctccaacaca tatggcctag actacgtaca 10740 taacctaaac ctactccaat gctaaaacta atcgtcccaa caattatatt actaccactg 10800 acatgactct ccaaaaaaca cataatttga atcaacacaa ccacccacag cctaattatt 10860 agcatcatcc ccctactatt ttttaaccaa atcaacaaca acctatttag ctgctcccca 10920 accttttcct ccgaccccct aacaaccccc ctcctaatac taactacctg actcctaccc 10980 ctcacaatca tggcaagcca acgccactta tccagtgaac cactatcacg aaaaaaactc 11040 tacctctcta tactaatctc cctacaaatc tccttaatta taacattcac agccacagaa 11100 ctaatcatat tttatatctt cttcgaaacc acacttatcc ccaccttggc tatcatcacc 11160 cgatgaggca accagccaga acgcctgaac gcaggcacat acttcctatt ctacacccta 11220 gtaggctccc ttcccctact catcgcacta atttacactc acaacaccct aggctcacta 11280 aacattctac tactcactct cactgcccaa gaactatcaa actcctgagc caacaactta 11340 atatgactag cttacacaat agcttttata gtaaagatac ctctttacgg actccactta 11400 tgactcccta aagcccatgt cgaagccccc atcgctgggt caatagtact tgccgcagta 11460 ctcttaaaac taggcggcta tggtataata cgcctcacac tcattctcaa ccccctgaca 11520 aaacacatag cctacccctt ccttgtacta tccctatgag gcataattat aacaagctcc 11580 atctgcctac gacaaacaga cctaaaatcg ctcattgcat actcttcaat cagccacata 11640 gccctcgtag taacagccat tctcatccaa accccctgaa gcttcaccgg cgcagtcatt 11700 ctcataatcg cccacggact tacatcctca ttactattct gcctagcaaa ctcaaactac 11760 gaacgcactc acagtcgcat cataatcctc tctcaaggac ttcaaactct actcccacta 11820 atagcttttt gatgacttct agcaagcctc gctaacctcg ccttaccccc cactattaac 11880 ctactgggag aactctctgt gctagtaacc acattctcct gatcaaatat cactctccta 11940 cttacaggac tcaacatact agtcacagcc ctatactccc tctacatatt taccacaaca 12000 caatgaggct cactcaccca ccacattaac aacataaaac cctcattcac acgagaaaac 12060 accctcatgt tcatacacct atcccccatt ctcctcctat ccctcaaccc cgacatcatc 12120 accgggtttt cctcttgtaa atatagttta accaaaacat cagattgtga atctgacaac 12180 agaggcttac gaccccttat ttaccgagaa agctcacaag aactgctaac tcatgccccc 12240 atgtctaaca acatggcttt ctcaactttt aaaggataac agctatccat tggtcttagg 12300 ccccaaaaat tttggtgcaa ctccaaataa aagtaataac catgcacact actataacca 12360 ccctaaccct gacttcccta attcccccca tccttaccac cctcgttaac cctaacaaaa 12420 aaaactcata cccccattat gtaaaatcca ttgtcgcatc cacctttatt atcagtctct 12480 tccccacaac aatattcatg tgcctagacc aagaagttat tatctcgaac tgacactgag 12540 ccacaaccca aacaacccag ctctccctaa gcttcaaact agactacttc tccataatat 12600 tcatccctgt agcattgttc gttacatggt ccatcataga attctcactg tgatatataa 12660 actcagaccc aaacattaat cagttcttca aatatctact cattttccta attaccatgc 12720 taatcttagt taccgctaac aacctattcc aactgttcat cggctgagag ggcgtaggaa 12780 ttatatcctt cttgctcatc agttgatgat acgcccgagc agatgccaac acagcagcca 12840 ttcaagcaat cctatacaac cgtatcggcg atatcggttt catcctcgcc ttagcatgat 12900 ttatcctaca ctccaactca tgagacccac aacaaatagc ccttctaaac gctaatccaa 12960 gcctcacccc actactaggc ctcctcctag cagcagcagg caaatcagcc caattaggtc 13020 tccacccctg actcccctca gccatagaag gccccacccc agtctcagcc ctactccact 13080 caagcactat agttgtagca ggagtcttct tactcatccg cttccacccc ctagcagaaa 13140 atagcccact aatccaaact ctaacactat gcttaggcgc tatcaccact ctgttcgcag 13200 cagtctgcgc ccttacacaa aatgacatca aaaaaatcgt agccttctcc acttcaagtc 13260 aactaggact catagtagtt acaatcggca tcaaccaacc acacctagca ttcctgcaca 13320 tctgtaccca cgccttcttc aaagccatac tatttatatg ctccgggtcc atcatccaca 13380 accttaacaa tgaacaagat attcgaaaaa taggaggact actcaaaacc atacctctca 13440 cttcaacctc cctcaccatt ggcagcctag cattagcagg aatacctttc ctcacaggtt 13500 tctattccaa agaccacatc atcgaaaccg caaacatatc atacacaaac gcctgagccc 13560 tatctattac tctcatcgct acctccctga caagcgccta tagcactcga ataattcttc 13620 tcaccctaac aggtcaacct cgcttcccta cccttactaa cattaacgaa aataacccca 13680 ccctactaaa ccccattaaa cgcctggcag ccggaagcct attcgcagga tttctcatta 13740 ctaacaacat ttcccccaca tcccccttcc aaacaacaat ccccctctac ctaaaactca 13800 cagccctcgc tgtcactttc ctaggacttc taacagccct agacctcaac tacctaacca 13860 acaaacttaa aataaaatcc ccactatgca cattttattt ctccaacata ctcggattct 13920 accctagcat cacacaccgc acaatcccct atctaggcct tcttacgagc caaaacctgc 13980 ccctactcct cctagaccta acctgactag aaaagctatt acctaaaaca atttcacagc 14040 accaaatctc cacctccatc atcacctcaa cccaaaaagg cataattaaa ctttacttcc 14100 tctctttctt cttcccactc atcctaaccc tactcctaat cacataacct attcccccga 14160 gcaatctcaa ttacaatata tacaccaaca aacaatgttc aaccagtaac tactactaat 14220 caacgcccat aatcatacaa agcccccgca ccaataggat cctcccgaat caaccctgac 14280 ccctctcctt cataaattat tcagcttcct acattattaa agtttaccac aaccaccacc 14340 ccatcatact ctttcaccca cagcaccaat cctacctcca tcgctaaccc cactaaaaca 14400 ctcaccaaga cctcaacccc tgacccccat gcctcaggat actcctcaat agccatcgct 14460 gtagtatatc caaagacaac catcattccc cctaaataaa ttaaaaaaac tattaaaccc 14520 atataacctc ccccaaaatt cagaataata acacacccga ccacaccgct aacaatcaat 14580 actaaacccc cataaatagg agaaggctta gaagaaaacc ccacaaaccc cattactaaa 14640 cccacactca acagaaataa agcatacatc attattctcg cacggactac aaccacgacc 14700 aatgatatga aaaaccatcg ttgtatttca actacaagaa caccaatgac cccaatacgc 14760 aaaattaacc ccctaataaa attaattaac cactcattca tcgacctccc caccccatcc 14820 aacatctccg catgatgaaa cttcggctca ctccttggcg cctgcctgat cctccaaatc 14880 accacaggac tattcctagc catgcactac tcaccagacg cctcaaccgc cttttcatca 14940 atcgcccaca tcactcgaga cgtaaattat ggctgaatca tccgctacct tcacgccaat 15000 ggcgcctcaa tattctttat ctgcctcttc ctacacatcg ggcgaggcct atattacgga 15060 tcatttctct actcagaaac ctgaaacatc ggcattatcc tcctgcttgc aactatagca 15120 acagccttca taggctatgt cctcccgtga ggccaaatat cattctgagg ggccacagta 15180 attacaaact tactatccgc catcccatac attgggacag acctagttca atgaatctga 15240 ggaggctact cagtagacag tcccaccctc acacgattct ttacctttca cttcatcttg 15300 cccttcatta ttgcagccct agcagcactc cacctcctat tcttgcacga aacgggatca 15360 aacaaccccc taggaatcac ctcccattcc gataaaatca ccttccaccc ttactacaca 15420 atcaaagacg ccctcggctt acttctcttc cttctctcct taataacatt aacactattc 15480 tcaccagacc tcctaggcga cccagacaat tataccctag ccaacccctt aaacacccct 15540 ccccacatca agcccgaatg atatttccta ttcgcctaca caattctccg atccgtccct 15600 aacaaactag gaggcgtcct tgccctatta ctatccatcc tcatcctagc aataatcccc 15660 atcctccata tatccaaaca acaaagcata gtatttcgcc cactaagcca atcactttat 15720 tgactcctag ccgcagacct cctcattcta acctgaatcg gaggacaacc agtaagctac 15780 ccttttacca tcattggaca agtagcatcc gtactatact tcacaacaat cctaatccta 15840 ataccaacta tctccctaat tgaaaacaaa atactcaaat gggcctgtcc ttgtagtata 15900 aactaataca ccagtcttgt aaaccggaaa tgaaaacctc tttccaagga caaatcagag 15960 aaaaagtctt taactccacc attagcaccc aaagctaaga ttctaattta aactattctc 16020 tgttctttca tggggaagca gatttgggta ccacccaagt attgactcac ccatcaacaa 16080 ccgctatgta tttcgtacat tactgccagc caccatgaat attgtacagt accataaata 16140 cttgaccacc tgtagtacat aaaaacccaa tccacatcaa aaccctcccc ccatgcttac 16200 aagcaagtac agcaatcaac cttcaactat cacacattaa ccgcaactcc aaagccaccc 16260 ctcacccact aggataccaa caaacctacc catccttaac agtacatagc acataaagcc 16320 atttaccgta catagcacat tacagtcaaa tcccttctcg tccccatgga tgacccccct 16380 cagatagggg tcccttgacc accatcctcc gtgaaatcaa tatcccgcac aagagtgcta 16440 ctctcctcgc tccgggccca taacacttgg gggtagctaa agtgaactgt atccgacatc 16500 tggttcctac ttcagggcca taaagcctaa atagcccaca cgttcccctt aaataagaca 16560 tcacgatg 16568 // ID KC345810; SV 1; circular; genomic DNA; STD; HUM; 16566 BP. XX AC KC345810; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT5_019 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16566 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16566 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; 1fe1bad206bd6fc5fcf5d6367fd8f306. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16566 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT5_019" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="G||ana" FT /db_xref="taxon:9606" FT /haplogroup="L0d1" FT D-loop complement(join(16021..16566,1..574)) FT tRNA 575..645 FT /product="tRNA-Phe" FT rRNA 646..1599 FT /product="12S ribosomal RNA" FT tRNA 1600..1668 FT /product="tRNA-Val" FT rRNA 1669..3226 FT /product="16S ribosomal RNA" FT tRNA 3227..3301 FT /product="tRNA-Leu" FT gene 3304..4259 FT /gene="ND1" FT CDS 3304..4259 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4258..4259,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q4GRH9" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:Q4GRH9" FT /protein_id="AGD82485.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPTTISSIPPQT" FT tRNA 4260..4328 FT /product="tRNA-Ile" FT tRNA complement(4326..4397) FT /product="tRNA-Gln" FT tRNA 4399..4466 FT /product="tRNA-Met" FT gene 4467..5508 FT /gene="ND2" FT CDS 4467..5508 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5508,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9B186" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9B186" FT /protein_id="AGD82486.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLITLTTLLLPIS FT PFMLMIL" FT tRNA 5509..5573 FT /product="tRNA-Trp" FT tRNA complement(5584..5652) FT /product="tRNA-Ala" FT tRNA complement(5654..5726) FT /product="tRNA-Asn" FT tRNA complement(5758..5823) FT /product="tRNA-Cys" FT tRNA complement(5823..5888) FT /product="tRNA-Tyr" FT gene 5901..7442 FT /gene="COX1" FT CDS 5901..7442 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B1J9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B1J9" FT /protein_id="AGD82487.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7442..7513) FT /product="tRNA-Ser" FT tRNA 7515..7582 FT /product="tRNA-Asp" FT gene 7583..8266 FT /gene="COX2" FT CDS 7583..8266 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /protein_id="AGD82488.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8292..8361 FT /product="tRNA-Lys" FT gene 8363..8569 FT /gene="ATP8" FT CDS 8363..8569 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82489.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8524..9204 FT /gene="ATP6" FT CDS 8524..9204 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B185" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B185" FT /protein_id="AGD82490.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9204..9987 FT /gene="COX3" FT CDS 9204..9987 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9987,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q2HJS3" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q2HJS3" FT /protein_id="AGD82491.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKSLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9988..10055 FT /product="tRNA-Gly" FT gene 10056..10401 FT /gene="ND3" FT CDS 10056..10401 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10401,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82492.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWAE" FT tRNA 10402..10466 FT /product="tRNA-Arg" FT gene 10467..10763 FT /gene="ND4L" FT CDS 10467..10763 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AGD82493.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10757..12134 FT /gene="ND4" FT CDS 10757..12134 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12134,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82494.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12135..12203 FT /product="tRNA-His" FT tRNA 12204..12262 FT /product="tRNA-Ser" FT tRNA 12263..12333 FT /product="tRNA-Leu" FT gene 12334..14145 FT /gene="ND5" FT CDS 12334..14145 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q4EYP3" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q4EYP3" FT /protein_id="AGD82495.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHSLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPTSPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14146..14670) FT /gene="ND6" FT CDS complement(14146..14670) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82496.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14671..14739) FT /product="tRNA-Glu" FT gene 14744..15884 FT /gene="CYTB" FT CDS 14744..15884 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15884,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:B1W913" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:B1W913" FT /protein_id="AGD82497.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLTADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15885..15950 FT /product="tRNA-Thr" FT tRNA complement(15952..16020) FT /product="tRNA-Pro" XX SQ Sequence 16566 BP; 5128 A; 5175 C; 2167 G; 4096 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcgagc atacctatta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa attcccacca 300 aaccccccct ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tatttttccc tcccactccc atactactaa 480 tctcatcaat acaaccccgc ccatcctacc cagcacacac accgctgcta accccatacc 540 ccgaaccaac caaaccccaa agacaccccc cacagtttat gtagcttacc tcctcaaagc 600 aatacactga aaatgtttag acgggctcac atcaccccat aaacaaatag gtttggtcct 660 agcctttcta ttagctctta gtaagattac acatgcaagc atccccgttc cagtgaattc 720 accctctaaa tcaccacgat caaaagggac aagcatcaag cacgcaacaa tgcagctcaa 780 aacgcttagc ctagccacac ccccacggga aacagcagtg ataaaccttt agcaataaac 840 gaaagtttaa ctaagctata ctaaccccag ggttggtcaa tttcgtgcca gccaccgcgg 900 tcacacgatt aacccaagtc aatagaagcc ggcgtaaaga gtgttttaga tcaccccctc 960 cccaataaag ctaaaactca cctgagttgt aaaaaactcc agttgacaca aaataaacta 1020 cgaaagtggc tttaacatat ctgaatacac aatagctaag acccaaactg ggattagata 1080 ccccactatg cttagcccta aacctcaaca gttaaatcaa caaaactgct cgccagaaca 1140 ctacgagcca cagcttaaaa ctcaaaggac ctggcggtgc ttcatatccc tctagaggag 1200 cctgttctgt aatcgataaa ccccgatcaa cctcaccacc tcttgctcag cctatatacc 1260 gccatcttca gcaaaccctg atgaaggcta caaagtaagc gcaagtaccc acgtaaagac 1320 gttaggtcaa ggtgtagccc atgaggtggc aagaaatggg ctacattttc taccccagaa 1380 aactacgata gcccttatga aacttaaggg tcgaaggtgg atttagcagt aaactaagag 1440 tagagtgctt agttgaacag ggccctgaag cgcgtacaca ccgcccgtca ccctcctcaa 1500 gtatacttca aaggacattt aactaaaacc cctacgcatt tatatagagg agacaagtcg 1560 taacatggta agtgtactgg aaagtgcact tggacgaacc agagtgtagc ttaacacaaa 1620 gcacccaact tacacttagg agatttcaac ttaacttgac cgctctgagc taaacctagc 1680 cccaaaccca ctccacctta ctaccagaca accttagcca aaccatttac ccaaataaag 1740 tataggcgat agaaattgaa acctggcgca atagatatag taccgcaagg gaaagatgaa 1800 aaattataac caagcataat atagcaagga ctaaccccta taccttctgc ataatgaatt 1860 aactagaaat aactttgcaa ggagagccaa agctaagacc cccgaaacca gacgagctac 1920 ctaagaacag ctaaaagagc acacccgtct atgtagcaaa atagtgggaa gatttatagg 1980 tagaggcgac aaacctaccg agcctggtga tagctggttg tccaagatag aatcttagtt 2040 caactttaaa tttgcccaca gaaccctcta aatccccttg taaatttaac tgttagtcca 2100 aagaggaaca gctctttgga cactaggaaa aaaccttgta gagagagtaa aaaatttaac 2160 acccatagta ggcctaaaag cagccaccaa ttaagaaagc gttcaagctc aacacccact 2220 acctaaaaaa tcccaaacat ataactgaac tcctcacacc caattggacc aatctatcac 2280 cctatagaag aactaatgtt agtataagta acatgaaaac attctcctcc gcataagcct 2340 gcgtcagatt aaaacactga actgacaatt aacagcccaa tatctacaat caaccaacaa 2400 gtcattatta ccctcactgt caacccaaca caggcatgct cataaggaaa ggttaaaaaa 2460 agtaaaagga actcggcaaa tcttaccccg cctgtttacc aaaaacatca cctctagcat 2520 caccagtatt agaggcaccg cctgcccagt gacacatgtt taacggccgc ggtaccctaa 2580 ccgtgcaaag gtagcataat cacttgttcc ttaaataggg acctgtatga atggctccac 2640 gagggttcag ctgtctctta cttttaacca gtgaaattga cctgcccgtg aagaggcggg 2700 cataacacag caagacgaga agaccctatg gagctttaat ttattaatgc aaacaatacc 2760 taacaaaccc acaggtccta aactaccaaa cctgcattaa aaatttcggt tggggcgacc 2820 tcggagcaga acccaacctc cgagcagtac atgctaagac ttcaccagtc aaagcgaact 2880 accatactca attgatccaa taacttgacc aacggaacaa gttaccctag ggataacagc 2940 gcaatcctat tctagagtcc atatcaacaa tagggtttac gacctcgatg ttggatcagg 3000 acatcccgat ggtgcagccg ctattaaagg ttcgtttgtt caacgattaa agtcctacgt 3060 gatctgagtt cagaccggag taatccaggt cggtttctat ctacttcaaa ttcctccctg 3120 tacgaaagga caagagaaat aaggcctact tcacaaagcg ccttcccccg taaatgatat 3180 catctcaact tagtattata cccacaccca cccaagaaca gggtttgtta agatggcaga 3240 gcccggtaat cgcataaaac ttaaaacttt acagtcagag gttcaattcc tcttcttaac 3300 aacataccca tggccaacct cctactcctc attgtaccca ttctaatcgc aatggcattc 3360 ctaatgctta ccgaacgaaa aattctaggc tatatacaac tacgcaaagg ccccaacgtt 3420 gtaggcccct acggactact acaacccttc gctgacgcca taaaactctt caccaaagag 3480 cccctaaaac ccgccacatc taccatcacc ctatacatca ccgccccgac cttagctctc 3540 accatcgctc ttctactatg aacccccctc cccataccca accccctggt taacctcaac 3600 ctaggcctcc tatttattct agccacctct agcctagccg tttactcaat cctctgatca 3660 ggatgagcat caaactcaaa ctacgccctg atcggcgcac tgcgagcagt agcccaaaca 3720 atctcatatg aagtcaccct agccatcatt ctgctatcaa cattactaat aagtggctcc 3780 tttaacctct ccacccttat cacaacacaa gaacacctct gattactcct gccatcatga 3840 cccttggcca taatatgatt tatctccaca ctagcagaga ccaaccgaac ccccttcgac 3900 cttgccgaag gggagtccga actagtctca ggcttcaaca tcgaatacgc cgcaggcccc 3960 ttcgccctat tcttcatagc cgaatacaca aacattatta taataaacac cctcaccact 4020 acaatcttcc taggaacaac atatgacgca ctctcccctg aactctacac aacatatttt 4080 gtcaccaaga ccctacttct gacctccctg ttcttatgaa ttcgaacagc atacccccga 4140 ttccgctacg accaactcat acacctccta tgaaaaaact tcctaccact cactctagca 4200 ttacttatat gatatgtctc catacccact acaatctcca gcattccccc tcaaacctaa 4260 gaaatatgtc tgataaaaga gttactttga tagagtaaat aataggagtt taaaccccct 4320 tatttctagg actatgagaa tcgaacccat ccctgagaat ccaaaattct ccgtgccacc 4380 tatcacaccc catcctaaag taaggtcagc taaataagct atcgggccca taccccgaaa 4440 atgttggtta tacccttccc gtactaatta atcccctggc ccaacccgtc atctactcta 4500 ccatctttgc aggcacactc atcacagcgc taagctcgca ctgatttttt acctgagtag 4560 gcctagaaat aaacatgcta gcttttattc cagttctaac caaaaaaata aaccctcgtt 4620 ccacagaagc tgccatcaag tatttcctca cgcaagcaac cgcatccata atccttctaa 4680 tagctatcct cttcaacaat atactctccg gacaatgaac cataaccaat actaccaatc 4740 aatactcatc attaataatc ataatggcta tagcaataaa actaggaata gccccctttc 4800 acttctgagt cccagaggtt acccaaggca cccctctgac atccggcctg cttcttctca 4860 catgacaaaa actagccccc atctcaatca tataccaaat ctctccctca ctaaacgtaa 4920 gccttctcct cactctctca atcttatcca tcatagcagg cagttgaggt ggattaaacc 4980 aaacccagct acgcaaaatc ttagcatact cctcaattac ccacatagga tgaataatag 5040 cagttctacc gtacaaccct aacataacca ttcttaattt aactatttat attatcctaa 5100 ctactaccgc attcctacta ctcaacttaa actccagcac cacgacccta ctactatctc 5160 gcacctgaaa caagctaaca tgactaacac ccttaattcc atccaccctc ctctccctag 5220 gaggcctgcc cccgctaacc ggctttttgc ccaaatgggc cattatcgaa gaattcacaa 5280 aaaacaatag cctcatcatc cccaccatca tagccaccat caccctcctt aacctctact 5340 tctacctacg cctaatctac tccacctcaa tcacactact ccccatatct aacaacgtaa 5400 aaataaaatg acagtttgaa catacaaaac ccaccccact cctccccaca ctcatcaccc 5460 ttaccacgct actcctacct atctcccctt ttatactaat aatcttatag aaatttaggt 5520 taaatacaga ccaagagcct tcaaagccct cagtaagttg caatacttaa tttctgtaac 5580 agctaaggac tgcaaaaccc cactctgcat caactgaacg caaatcagcc actttaatta 5640 agctaagccc ttactagacc aatgggactt aaacccacaa acacttagtt aacagctaag 5700 caccctaatc aactggcttc aatctacttc tcccgccgcc gggaaaaaag gcgggagaag 5760 ccccggcagg tttgaagctg cttcttcgaa tttgcaattc aatatgaaaa tcacctcgga 5820 gctggtaaaa agaggcctaa cccctgtctt tagatttaca gtccaatgct tcactcagcc 5880 attttacctc acccccactg atgttcgccg accgttgact attctctaca aaccacaaag 5940 acattggaac actataccta ttattcggcg catgagctgg agtcctaggc acagctctaa 6000 gcctccttat tcgagccgag ctgggccagc caggcaacct tctaggtaac gaccacatct 6060 acaacgttat cgtcacagcc catgcatttg taataatctt cttcatagta atacccatca 6120 taatcggagg ctttggcaac tgactagttc ccctaataat cggtgccccc gatatggcgt 6180 tcccccgcat aaacaacata agcttctgac tcttacctcc ctctctccta ctcctgctcg 6240 catctgctat agtggaggcc ggggcaggaa caggttgaac agtctaccct cccttagcag 6300 ggaactactc ccaccctgga gcctccgtag acctaaccat cttctcctta cacctagcag 6360 gtgtctcctc tatcttaggg gccatcaatt tcatcacaac aattatcaat ataaaacccc 6420 ctgccataac ccaataccaa acgcccctct tcgtctgatc cgtcctaatc acagcagtcc 6480 tacttctcct atctctccca gtcctagctg ctggcatcac tatactacta acagaccgca 6540 acctcaacac caccttcttc gaccccgccg gaggaggaga ccccattcta taccaacacc 6600 tattctgatt tttcggtcac cctgaagttt atattcttat cctaccaggc ttcggaataa 6660 tctcccatat tgtaacttac tactccggaa aaaaagaacc atttggatac ataggtatgg 6720 tctgagctat gatatcaatt ggcttcctag ggtttatcgt gtgagcacac catatattta 6780 cagtaggaat agacgtagac acacgagcat acttcacctc cgctaccata atcatcgcta 6840 tccccaccgg cgtcaaagta tttagctgac tcgccacact ccacggaagc aatatgaaat 6900 gatctgctgc agtgctctga gccctaggat tcatctttct tttcaccgta ggtggcctga 6960 ctggcattgt attagcaaac tcatcactag acatcgtact acacgacacg tactacgttg 7020 tagctcactt ccactatgtc ctatcaatag gagctgtatt tgccatcata ggaggcttca 7080 ttcactgatt tcccctattc tcaggctaca ccctagacca aacctacgcc aaaatccatt 7140 tcgctatcat attcatcggc gtaaatctaa ctttcttccc acaacacttt ctcggcctat 7200 ccggaatgcc ccgacgttac tcggactacc ccgatgcata caccacatga aatatcctat 7260 catctgtagg ctcattcatt tctctaacag cagtaatatt aataattttc atgatttgag 7320 aagccttcgc ttcgaagcga aaagtcctaa tagtagaaga accctccata aacctggagt 7380 gactatatgg atgcccccca ccctaccaca cattcgaaga acccgtatac ataaaatcta 7440 gacaaaaaag gaaggaatcg aaccccccaa agctggtttc aagccaaccc catggcctcc 7500 atgacttttt caaaaagata ttagaaaaac catttcataa ctttgtcaaa gttaaattat 7560 aggctaaatc ctatatatct taatggcaca tgcagcgcaa gtaggtctac aagacgctac 7620 ttcccctatc atagaagagc ttatcacctt tcatgatcac gccctcataa tcattttcct 7680 tatctgcttc ctagtcctgt atgccctttt cctaacactc acaacaaaac taactaatac 7740 taacatctca gacgctcagg aaatagaaac cgtctgaact atcctgcccg ccatcatcct 7800 agtcctcatc gccctcccat ccctgcgcat cctttacata acagacgagg tcaacgatcc 7860 ctcccttacc atcaaatcaa ttggccacca atggtactga acctacgagt acaccgacta 7920 cggcggacta atcttcaact cctacatact tcccccatta ttcctagaac caggcgacct 7980 gcgactcctt gacgttgaca atcgagtagt actcccgatt gaagccccca ttcgtataat 8040 aattacatca caagacgtct tgcactcatg agctgtcccc acattaggct taaaaacaga 8100 tgcaattcca ggacgtctaa accaaaccac tttcaccgct acacgaccag gggtatacta 8160 cggtcaatgc tctgaaatct gtggagcaaa ccacagtttc atgcccatcg tcctagaatt 8220 aattccccta aaaatctttg aaataggacc cgtatttacc ctatagcacc ccctctaccc 8280 cctctagagc ccactgtaaa gctaacttag cattaacctt ttaagttaaa gattaagaga 8340 accaacacct ctttacagtg aaatgcccca actaaatact accgtatggc ccaccataat 8400 tacccccata ctccttacac tattcctcat cacccaacta aaaatattaa acacaaacta 8460 ccacttacct ccctcaccaa agcccataaa aataaaaaat tataacaaac cctgagaacc 8520 aaaatgaacg aaaatctgtt cgcttcattc attgccccca caatcctagg cctacccgcc 8580 gcagtactga tcattctatt tccccctcta ttgatcccca cctccaaata tctcatcaac 8640 aaccgactaa ttaccaccca acaatgacta atcaaactaa cctcaaaaca aatgatagcc 8700 atacacaaca ctaaaggacg aacctgatct cttatactag tatccttaat catttttatt 8760 gccacaacta acctcctcgg actcctgcct cactcattta caccaaccac ccaactatct 8820 ataaacctag ccatggccat ccccttatga gcgggcgcag tgattatagg ctttcgctct 8880 aagattaaaa atgccctagc ccacttctta ccacaaggca cacctacacc ccttatcccc 8940 atactagtta ttatcgaaac catcagccta ctcattcaac caatagccct ggccgtacgc 9000 ctaaccgcta acattactgc aggccaccta ctcatgcatc taattggaag cgccacccta 9060 gcaatatcaa ccattaacct tccctctaca cttatcatct tcacaattct aattctactg 9120 actatcctag aaatcgctgt cgccttgatc caagcctacg ttttcacact tctagtaagc 9180 ctctacctgc acgacaacac ataatgaccc accaatcaca tgcctatcat atagtaaaac 9240 ccagcccatg acccctaaca ggggccctct cagccctcct aatgacctcc ggcctagcca 9300 tgtgatttca cttccactcc ataacgctcc tcatactagg cctgctaacc aacacactaa 9360 ccatatacca atgatggcgc gatgtaacac gagaaagcac ataccaaggc caccacacac 9420 cacctgtcca aaaaagcctt cgatacggga taatcctatt tattacctca gaagtttttt 9480 tcttcgcagg atttttctga gccttttacc actccagcct agcccctacc ccccaactag 9540 gagggcactg gcccccaaca ggcatcaccc cgctaaatcc cctagaagtc ccactcctaa 9600 acacatccgt attactcgca tcaggagtat caatcacctg agctcaccat agtctaatag 9660 aaaacaaccg aaaccaaata attcaagcac tgcttattac aattttactg ggtctctatt 9720 ttaccctcct acaagcctca gagtacttcg aatctccctt caccatttcc gacggcatct 9780 acggctcaac attttttgta gccacaggct tccacggact tcacgtcatt attggctcaa 9840 ctttcctcac tatctgcttc atccgccaac taatatttca ctttacatcc aaacatcact 9900 ttggcttcga agccgccgcc tgatactggc attttgtaga tgtggtttga ctatttctgt 9960 atgtctccat ctattgatga gggtcttact cttttagtat aaatagtacc gttaacttcc 10020 aattaactag ttttgacaac attcaaaaaa gagtaataaa cttcgcctta attttaataa 10080 tcaacaccct cctagcctta ctactaataa ttattacatt ttgactacca caactcaacg 10140 gctacataga aaaatccacc ccttacgagt gcggcttcga ccctatatcc cccgcccgcg 10200 tccctttctc cataaaattc ttcttagtag ctattacctt cttattattt gatctagaaa 10260 ttgccctcct tttaccccta ccatgagccc tacaaacaac taacctgcca ctaatagtta 10320 tgtcatccct cttattaatc atcatcctag ccctaagtct ggcctatgag tgactacaaa 10380 aaggattaga ctgagccgaa ttggtatata gtttaaacaa aacgaatgat ttcgactcat 10440 taaattatga taatcatatt taccaaatgc ccctcattta cataaatatt atactagcat 10500 ttaccatctc acttctagga atactagtat atcgctcaca cctcatatcc tccctactat 10560 gcctagaagg aataatacta tcgctattca ttatagctac tctcataacc ctcaacaccc 10620 actccctctt agccaatatt gtgcctattg ccatactagt ttttgccgcc tgcgaagcag 10680 cggtaggcct agccctacta gtctcaatct ccaacacata tggcctagac tacgtacata 10740 acctaaacct actccaatgc taaaactaat cgtcccaaca attatattac taccactgac 10800 atgactctcc aaaaaacaca taatttgaat caacacaacc acccacagcc taattattag 10860 catcatcccc ctactatttt ttaaccaaat caacaacaac ctatttagct gctccccaac 10920 cttttcctcc gaccccctaa caacccccct cctaatacta actacctgac tcctacccct 10980 cacaatcatg gcaagccaac gccacttatc cagtgaacca ctatcacgaa aaaaactcta 11040 cctctctata ctaatctccc tacaaatctc cttaattata acattcacag ccacagaact 11100 aatcatattt tatatcttct tcgaaaccac acttatcccc accttggcta tcatcacccg 11160 atgaggcaac cagccagaac gcctgaacgc aggcacatac ttcctattct acaccctagt 11220 aggctccctt cccctactca tcgcactaat ttacactcac aacaccctag gctcactaaa 11280 cattctacta ctcactctca ctgcccaaga actatcaaac tcctgagcca acaacttaat 11340 atgactagct tacacaatag cttttatagt aaagatacct ctttacggac tccacttatg 11400 actccctaaa gcccatgtcg aagcccccat cgccgggtca atagtacttg ccgcagtact 11460 cttaaaacta ggcggctatg gtataatacg cctcacactc attctcaacc ccctgacaaa 11520 acacatagcc taccccttcc ttgtactatc cctatgaggc ataattataa caagctccat 11580 ctgcctacga caaacagacc taaaatcgct cattgcatac tcttcaatca gccacatagc 11640 cctcgtagta acagccattc tcatccaaac cccctgaagc ttcaccggcg cagtcattct 11700 cataatcgcc cacggactta catcctcatt actattctgc ctagcaaact caaactacga 11760 acgcactcac agtcgcatca taatcctctc tcaaggactt caaactctac tcccactaat 11820 agctttttga tgacttctag caagcctcgc taacctcgcc ttacccccca ctattaacct 11880 actgggagaa ctctctgtgc tagtaaccac attctcctga tcaaatatca ctctcctact 11940 tacaggactc aacatactag tcacagccct atactccctc tacatattta ccacaacaca 12000 atgaggctca ctcacccacc acattaacaa cataaaaccc tcattcacac gagaaaacac 12060 cctcatgttc atacacctat cccccattct cctcctatcc ctcaaccccg acatcatcac 12120 cgggttttcc tcttgtaaat atagtttaac caaaacatca gattgtgaat ctgacaacag 12180 aggcttacga ccccttattt accgagaaag ctcacaagaa ctgctaactc acgcccccat 12240 gtctaacaac atggctttct caacttttaa aggataacag ctatccattg gtcttaggcc 12300 ccaaaaattt tggtgcaact ccaaataaaa gtaataacca tgcacactac tataaccacc 12360 ctaaccctga cttccctaat tccccccatc cttaccaccc tcgttaaccc taacaaaaaa 12420 aactcatacc cccattatgt aaaatccatt gtcgcatcca cctttattat cagtctcttc 12480 cccacaacaa tattcatgtg cctagaccaa gaagttatta tctcgaactg acactgagcc 12540 acaacccaaa caacccagct ctccctaagc ttcaaactag actacttctc cataatattc 12600 atccctgtag cattgttcgt tacatggtcc atcatagaat tctcactgtg atatataaac 12660 tcagacccaa acattaatca gttcttcaaa tatctactca ttttcctaat taccatgcta 12720 atcttagtta ccgctaacaa cctattccaa ctgttcatcg gctgagaggg cgtaggaatt 12780 atatccttct tgctcatcag ttgatgatac gcccgagcag atgccaacac agcagccatt 12840 caagcaatcc tatacaaccg tatcggcgat atcggtttca tcctcgcctt agcatgattt 12900 atcctacact ccaactcatg agacccacaa caaatagccc ttctaaacgc taatccaagc 12960 ctcaccccac tactaggcct cctcctagca gcagcaggca aatcagccca attaggtctc 13020 cacccctgac tcccctcagc catagaaggc cccaccccag tctcagccct actccactca 13080 agcactatag ttgtagcagg agtcttctta ctcatccgct tccactccct agcagaaaat 13140 agcccactaa tccaaactct aacactatgc ttaggcgcta tcaccactct gttcgcagca 13200 gtctgcgccc ttacacaaaa tgacatcaaa aaaatcgtag ccttctccac ttcaagtcaa 13260 ctaggactca tagtagttac aatcggcatc aaccaaccac acctagcatt cctgcacatc 13320 tgtacccacg ccttcttcaa agccatacta tttatgtgct ccgggtccat catccacaac 13380 cttaacaatg aacaagatat tcgaaaaata ggaggactac tcaaaaccat acctctcact 13440 tcaacctccc tcaccattgg cagcctagca ttagcaggaa tacctttcct cacaggtttc 13500 tattccaaag accacatcat cgaaaccgca aacatatcat acacaaacgc ctgagcccta 13560 tctattactc tcatcgctac ctccctgaca agcgcctata gcactcgaat aattcttctc 13620 accctaacag gtcaacctcg cttccctacc cttactaaca ttaacgaaaa taaccccacc 13680 ctactaaacc ccattaaacg cctggcagcc ggaagcctat tcgcaggatt tctcattact 13740 aacaacattt cccccacatc ccccttccaa acaacaatcc ccctctacct aaaactcaca 13800 gccctcgctg tcactttcct aggacttcta acagccctag acctcaacta cctaaccaac 13860 aaacttaaaa taaaatcccc actatgcaca ttttatttct ccaacatact cggattctac 13920 cctagcatca cacaccgcac aatcccctat ctaggccttc ttacgagcca aaacctgccc 13980 ctactcctcc tagacctaac ctgactagaa aagctattac ctaaaacaat ttcacagcac 14040 caaatctcca cctccatcat cacctcaacc caaaaaggca taattaaact ttacttcctc 14100 tctttcttct tcccactcat cctaacccta ctcctaatca cataacctat tcccccgagc 14160 aatctcaatt acaatatata caccaacaaa caatgttcaa ccagtaacta ctactaatca 14220 acgcccataa tcatacaaag cccccgcacc aataggatcc tcccgaatca accctgaccc 14280 ctctccttca taaattattc agcttcctac actattaaag tttaccacaa ccaccacccc 14340 atcatactct ttcacccaca gcaccaatcc tacctccatc gctaacccca ctaaaacact 14400 caccaagacc tcaacccctg acccccatgc ctcaggatac tcctcaatag ccatcgctgt 14460 agtatatcca aagacaacca tcattccccc taaataaatt aaaaaaacta ttaaacccat 14520 ataacctccc ccaaaattca gaataataac acacccgacc acaccgctaa caatcaatac 14580 taaaccccca taaataggag aaggcttaga agaaaacccc acaaacccca ttactaaacc 14640 cacactcaac agaaacaaag catacatcat tattctcgca cggactacaa ccacgaccaa 14700 tgatatgaaa aaccatcgtt gtatttcaac tacaagaaca ccaatgaccc caatacgcaa 14760 aattaacccc ctaataaaat taattaacca ctcattcatc gacctcccca ccccatccaa 14820 catctccgca tgatgaaact tcggctcact ccttggcgcc tgcctgatcc tccaaatcac 14880 cacaggacta ttcctagcca tgcactactc accagacgcc tcaaccgcct tttcatcaat 14940 cgcccacatc actcgagacg taaattatgg ctgaatcatc cgctaccttc acgccaatgg 15000 cgcctcaata ttctttatct gcctcttcct acacatcggg cgaggcctat attacggatc 15060 atttctctac tcagaaacct gaaacatcgg cattatcctc ctgcttgcaa ctatagcaac 15120 agccttcata ggctatgtcc tcccgtgagg ccaaatatca ttctgagggg ccacagtaat 15180 tacaaactta ctatccgcca tcccatacat tgggacagac ctagttcaat gaatctgagg 15240 aggctactca gtagacagtc ccaccctcac acgattcttt acctttcact tcatcttgcc 15300 cttcattatt gcagccctag cagcactcca cctcctattc ttgcacgaaa cgggatcaaa 15360 caacccccta ggaatcacct cccattccga taaaatcacc ttccaccctt actacacaat 15420 caaagacgcc ctcggcttac ttctcttcct tctctcctta ataacattaa cactattctc 15480 accagacctc ctaggcgacc cagacaatta taccctagcc aaccccttaa acacccctcc 15540 ccacattaag cccgaatgat atttcctatt cgcctacaca attctccgat ccgtccctaa 15600 caaactagga ggcgtccttg ccctattact atccatcctc atcctagcaa taatccccat 15660 cctccatata tccaaacaac aaagcataat atttcgccca ctaagccaat cactttattg 15720 actcctaacc gcagacctcc tcattctaac ctgaatcgga ggacaaccag taagctaccc 15780 ttttaccatc attggacaag tagcatccgt actatacttc acaacaatcc taatcctaat 15840 accaactatc tccctaattg aaaacaaaat actcaaatgg gcctgtcctt gtagtataaa 15900 ctaatacacc agtcttgtaa accggaaatg aaaacctctt tccaagggca aatcagagaa 15960 aaagtcttta actccaccat tagcacccaa agctaagatt ctaatttaaa ctattctctg 16020 ttctttcatg gggaagcaga tttgggtacc acccaagtat tgactcaccc atcaacaacc 16080 gctatgtatt tcgtacatta ctgccagcca ccatgaatat tgtacggtac cataaatact 16140 tgaccacctg tagtacataa aaatccaatc cacatcaaaa ccctcccccc atgcttacaa 16200 gcaagtacag caatcaacct tcaactgtca tacatcaatc gcaactccaa agccacccct 16260 cacccactag gataccaaca aacttaccca cccttaacag tacatagcac ataaagccat 16320 ttaccgtaca tagcacatta cagtcaaatc ccttctcgtc cccatggatg acccccctca 16380 gataggggtc ccttgaccac catcctccgt gaaatcaata tcccgcacaa gagtgctact 16440 ctcctcgctc cgggcccata acacttgggg gtagctaaag tgaactgtat ccgacatctg 16500 gttcctactt cagggccata aagcctaaat agcccacacg ttccccttaa ataagacatc 16560 acgatg 16566 // ID KC345811; SV 1; circular; genomic DNA; STD; HUM; 16566 BP. XX AC KC345811; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT5_026 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16566 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16566 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; aa7f881bf37761a0bb23a789b7a84a4e. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16566 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT5_026" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="G||ana" FT /db_xref="taxon:9606" FT /haplogroup="L0d1" FT D-loop complement(join(16021..16566,1..574)) FT tRNA 575..645 FT /product="tRNA-Phe" FT rRNA 646..1599 FT /product="12S ribosomal RNA" FT tRNA 1600..1668 FT /product="tRNA-Val" FT rRNA 1669..3226 FT /product="16S ribosomal RNA" FT tRNA 3227..3301 FT /product="tRNA-Leu" FT gene 3304..4259 FT /gene="ND1" FT CDS 3304..4259 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4258..4259,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q4GRH9" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:Q4GRH9" FT /protein_id="AGD82498.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPTTISSIPPQT" FT tRNA 4260..4328 FT /product="tRNA-Ile" FT tRNA complement(4326..4397) FT /product="tRNA-Gln" FT tRNA 4399..4466 FT /product="tRNA-Met" FT gene 4467..5508 FT /gene="ND2" FT CDS 4467..5508 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5508,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82499.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5509..5573 FT /product="tRNA-Trp" FT tRNA complement(5584..5652) FT /product="tRNA-Ala" FT tRNA complement(5654..5726) FT /product="tRNA-Asn" FT tRNA complement(5758..5823) FT /product="tRNA-Cys" FT tRNA complement(5823..5888) FT /product="tRNA-Tyr" FT gene 5901..7442 FT /gene="COX1" FT CDS 5901..7442 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B1J9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B1J9" FT /protein_id="AGD82500.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7442..7513) FT /product="tRNA-Ser" FT tRNA 7515..7582 FT /product="tRNA-Asp" FT gene 7583..8266 FT /gene="COX2" FT CDS 7583..8266 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /protein_id="AGD82501.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8292..8361 FT /product="tRNA-Lys" FT gene 8363..8569 FT /gene="ATP8" FT CDS 8363..8569 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82502.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8524..9204 FT /gene="ATP6" FT CDS 8524..9204 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B185" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B185" FT /protein_id="AGD82503.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9204..9987 FT /gene="COX3" FT CDS 9204..9987 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9987,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q2HJS3" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q2HJS3" FT /protein_id="AGD82504.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKSLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9988..10055 FT /product="tRNA-Gly" FT gene 10056..10401 FT /gene="ND3" FT CDS 10056..10401 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10401,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82505.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWAE" FT tRNA 10402..10466 FT /product="tRNA-Arg" FT gene 10467..10763 FT /gene="ND4L" FT CDS 10467..10763 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AGD82506.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10757..12134 FT /gene="ND4" FT CDS 10757..12134 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12134,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82507.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12135..12203 FT /product="tRNA-His" FT tRNA 12204..12262 FT /product="tRNA-Ser" FT tRNA 12263..12333 FT /product="tRNA-Leu" FT gene 12334..14145 FT /gene="ND5" FT CDS 12334..14145 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q4EYP3" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q4EYP3" FT /protein_id="AGD82508.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHSLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPTSPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14146..14670) FT /gene="ND6" FT CDS complement(14146..14670) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82509.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14671..14739) FT /product="tRNA-Glu" FT gene 14744..15884 FT /gene="CYTB" FT CDS 14744..15884 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15884,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q6VJ80" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q6VJ80" FT /protein_id="AGD82510.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15885..15950 FT /product="tRNA-Thr" FT tRNA complement(15952..16020) FT /product="tRNA-Pro" XX SQ Sequence 16566 BP; 5126 A; 5175 C; 2169 G; 4096 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcgaac atacctatta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tatttttccc tcccactccc atactactaa 480 tctcatcaat acaaccccgc ccatcctacc cagcacacac accgctgcta accccatacc 540 ccgaaccaac caaaccccaa agacaccccc cacagtttat gtagcttacc tcctcaaagc 600 aatacactga aaatgtttag acgggctcac atcaccccat aaacaaatag gtttggtcct 660 agcctttcta ttagctctta gtaagattac acatgcaagc atccccgttc cagtgaattc 720 accctctaaa tcaccacgat caaaagggac aagcatcaag cacgcaacaa tgcagctcaa 780 aacgcttagc ctagccacac ccccacggga aacagcagtg ataaaccttt agcaataaac 840 gaaagtttaa ctaagctata ctaaccccag ggttggtcaa tttcgtgcca gccaccgcgg 900 tcacacgatt aacccaagtc aatagaagcc ggcgtaaaga gtgttttaga tcaccccctc 960 cccaataaag ctaaaactca cctgagttgt aaaaaactcc agttgacaca aaataaacta 1020 cgaaagtggc tttaacatat ctgaatacac aatagctaag acccaaactg ggattagata 1080 ccccactatg cttagcccta aacctcaaca gttaaatcaa caaaactgct cgccagaaca 1140 ctacgagcca cagcttaaaa ctcaaaggac ctggcggtgc ttcatatccc tctagaggag 1200 cctgttctgt aatcgataaa ccccgatcaa cctcaccacc tcttgctcag cctatatacc 1260 gccatcttca gcaaaccctg atgaaggcta caaagtaagc gcaagtaccc acgtaaagac 1320 gttaggtcaa ggtgtagccc atgaggtggc aagaaatggg ctacattttc taccccagaa 1380 aactacgata gcccttatga aacttaaggg tcgaaggtgg atttagcagt aaactaagag 1440 tagagtgctt agttgaacag ggccctgaag cgcgtacaca ccgcccgtca ccctcctcaa 1500 gtatacttca aaggacattt aactaaaacc cctacgcatt tatatagagg agacaagtcg 1560 taacatggta agtgtactgg aaagtgcact tggacgaacc agagtgtagc ttaacacaaa 1620 gcacccaact tacacttagg agatttcaac ttaacttgac cgctctgagc taaacctagc 1680 cccaaaccca ctccacctta ctaccagaca accttagcca aaccatttac ccaaataaag 1740 tataggcgat agaaattgaa acctggcgca atagatatag taccgcaagg gaaagatgaa 1800 aaattataac caagcataat atagcaagga ctaaccccta taccttctgc ataatgaatt 1860 aactagaaat aactttgcaa ggagagccaa agctaagacc cccgaaacca gacgagctac 1920 ctaagaacag ctaaaagagc acacccgtct atgtagcaaa atagtgggaa gatttatagg 1980 tagaggcgac aaacctaccg agcctggtga tagctggttg tccaagatag aatcttagtt 2040 caactttaaa tttgcccaca gaaccctcta aatccccttg taaatttaac tgttagtcca 2100 aagaggaaca gctctttgga cactaggaaa aaaccttgta gagagagtaa aaaatttaac 2160 acccatagta ggcctaaaag cagccaccaa ttaagaaagc gttcaagctc aacacccact 2220 acctaaaaaa tcccaaacat ataactgaac tcctcacacc caattggacc aatctatcac 2280 cctatagaag aactaatgtt agtataagta acatgaaaac attctcctcc gcataagcct 2340 gcgtcagatt aaaacactga actgacaatt aacagcccaa tatctacaat caaccaacaa 2400 gtcattatta ccctcactgt caacccaaca caggcatgct cataaggaaa ggttaaaaaa 2460 agtaaaagga actcggcaaa tcttaccccg cctgtttacc aaaaacatca cctctagcat 2520 caccagtatt agaggcaccg cctgcccagt gacacatgtt taacggccgc ggtaccctaa 2580 ccgtgcaaag gtagcataat cacttgttcc ttaaataggg acctgtatga atggctccac 2640 gagggttcag ctgtctctta cttttaacca gtgaaattga cctgcccgtg aagaggcggg 2700 cataacacag caagacgaga agaccctatg gagctttaat ttattaatgc aaacaatacc 2760 taacaaaccc acaggtccta aactaccaaa cctgcattaa aaatttcggt tggggcgacc 2820 tcggagcaga acccaacctc cgagcagtac atgctaagac ttcaccagtc aaagcgaact 2880 accatactca attgatccaa taacttgacc aacggaacaa gttaccctag ggataacagc 2940 gcaatcctat tctagagtcc atatcaacaa tagggtttac gacctcgatg ttggatcagg 3000 acatcccgat ggtgcagccg ctattaaagg ttcgtttgtt caacgattaa agtcctacgt 3060 gatctgagtt cagaccggag taatccaggt cggtttctat ctacttcaaa ttcctccctg 3120 tacgaaagga caagagaaat aaggcctact tcacaaagcg ccttcccccg taaatgatat 3180 catctcaact tagtattata cccacaccca cccaagaaca gggtttgtta agatggcaga 3240 gcccggtaat cgcataaaac ttaaaacttt acagtcagag gttcaattcc tcttcttaac 3300 aacataccca tggccaacct cctactcctc attgtaccca ttctaatcgc aatggcattc 3360 ctaatgctta ccgaacgaaa aattctaggc tatatacaac tacgcaaagg ccccaacgtt 3420 gtaggcccct acggactact acaacccttc gctgacgcca taaaactctt caccaaagag 3480 cccctaaaac ccgccacatc taccatcacc ctatacatca ccgccccgac cttagctctc 3540 accatcgctc ttctactatg aacccccctc cccataccca accccctggt taacctcaac 3600 ctaggcctcc tatttattct agccacctct agcctagccg tttactcaat cctctgatca 3660 ggatgagcat caaactcaaa ctacgccctg atcggcgcac tgcgagcagt agcccaaaca 3720 atctcatatg aagtcaccct agccatcatt ctgctatcaa cattactaat aagtggctcc 3780 tttaacctct ccacccttat cacaacacaa gaacacctct gattactcct gccatcatga 3840 cccttggcca taatatgatt tatctccaca ctagcagaga ccaaccgaac ccccttcgac 3900 cttgccgaag gggagtccga actagtctca ggcttcaaca tcgaatacgc cgcaggcccc 3960 ttcgccctat tcttcatagc cgaatacaca aacattatta taataaacac cctcaccact 4020 acaatcttcc taggaacaac atatgacgca ctctcccctg aactctacac aacatatttt 4080 gtcaccaaga ccctacttct gacctccctg ttcttatgaa ttcgaacagc atacccccga 4140 ttccgctacg accaactcat acacctccta tgaaaaaact tcctaccact cactctagca 4200 ttacttatat gatatgtctc catacccact acaatctcca gcattccccc tcaaacctaa 4260 gaaatatgtc tgataaaaga gttactttga tagagtaaat aataggagtt taaaccccct 4320 tatttctagg actatgagaa tcgaacccat ccctgagaat ccaaaattct ccgtgccacc 4380 tatcacaccc catcctaaag taaggtcagc taaataagct atcgggccca taccccgaaa 4440 atgttggtta tacccttccc gtactaatta atcccctggc ccaacccgtc atctactcta 4500 ccatctttgc aggcacactc atcacagcgc taagctcgca ctgatttttt acctgagtag 4560 gcctagaaat aaacatgcta gcttttattc cagttctaac caaaaaaata aaccctcgtt 4620 ccacagaagc tgccatcaag tatttcctca cgcaagcaac cgcatccata atccttctaa 4680 tagctatcct cttcaacaat atactctccg gacaatgaac cataaccaat actaccaatc 4740 aatactcatc attaataatc ataatggcta tagcaataaa actaggaata gccccctttc 4800 acttctgagt cccagaggtt acccaaggca cccctctgac atccggcctg cttcttctca 4860 catgacaaaa actagccccc atctcaatca tataccaaat ctctccctca ctaaacgtaa 4920 gccttctcct cactctctca atcttatcca tcatagcagg cagttgaggt ggattaaacc 4980 aaacccagct acgcaaaatc ttagcatact cctcaattac ccacatagga tgaataatag 5040 cagttctacc gtacaaccct aacataacca ttcttaattt aactatttat attatcctaa 5100 ctactaccgc attcctacta ctcaacttaa actccagcac cacgacccta ctactatctc 5160 gcacctgaaa caagctaaca tgactaacac ccttaattcc atccaccctc ctctccctag 5220 gaggcctgcc cccgctaacc ggctttttgc ccaaatgggc cattatcgaa gaattcacaa 5280 aaaacaatag cctcatcatc cccaccatca tagccaccat caccctcctt aacctctact 5340 tctacctacg cctaatctac tccacctcaa tcacactact ccccatatct aacaacgtaa 5400 aaataaaatg acagtttgaa catacaaaac ccaccccact cctccccaca ctcatcgccc 5460 ttaccacgct actcctacct atctcccctt ttatactaat aatcttatag aaatttaggt 5520 taaatacaga ccaagagcct tcaaagccct cagtaagttg caatacttaa tttctgtaac 5580 agctaaggac tgcaaaaccc cactctgcat caactgaacg caaatcagcc actttaatta 5640 agctaagccc ttactagacc aatgggactt aaacccacaa acacttagtt aacagctaag 5700 caccctaatc aactggcttc aatctacttc tcccgccgcc gggaaaaaag gcgggagaag 5760 ccccggcagg tttgaagctg cttcttcgaa tttgcaattc aatatgaaaa tcacctcgga 5820 gctggtaaaa agaggcctaa cccctgtctt tagatttaca gtccaatgct tcactcagcc 5880 attttacctc acccccactg atgttcgccg accgttgact attctctaca aaccacaaag 5940 acattggaac actataccta ttattcggcg catgagctgg agtcctaggc acagctctaa 6000 gcctccttat tcgagccgag ctgggccagc caggcaacct tctaggtaac gaccacatct 6060 acaacgttat cgtcacagcc catgcatttg taataatctt cttcatagta atacccatca 6120 taatcggagg ctttggcaac tgactagttc ccctaataat cggtgccccc gatatggcgt 6180 tcccccgcat aaacaacata agcttctgac tcttacctcc ctctctccta ctcctgctcg 6240 catctgctat agtggaggcc ggggcaggaa caggttgaac agtctaccct cccttagcag 6300 ggaactactc ccaccctgga gcctccgtag acctaaccat cttctcctta cacctagcag 6360 gtgtctcctc tatcttaggg gccatcaatt tcatcacaac aattatcaat ataaaacccc 6420 ctgccataac ccaataccaa acgcccctct tcgtctgatc cgtcctaatc acagcagtcc 6480 tacttctcct atctctccca gtcctagctg ctggcatcac tatactacta acagaccgca 6540 acctcaacac caccttcttc gaccccgccg gaggaggaga ccccattcta taccaacacc 6600 tattctgatt tttcggtcac cctgaagttt atattcttat cctaccaggc ttcggaataa 6660 tctcccatat tgtaacttac tactccggaa aaaaagaacc atttggatac ataggtatgg 6720 tctgagctat gatatcaatt ggcttcctag ggtttatcgt gtgagcacac catatattta 6780 cagtaggaat agacgtagac acacgagcat acttcacctc cgctaccata atcatcgcta 6840 tccccaccgg cgtcaaagta tttagctgac tcgccacact ccacggaagc aatatgaaat 6900 gatctgctgc agtgctctga gccctaggat tcatctttct tttcaccgta ggtggcctga 6960 ctggcattgt attagcaaac tcatcactag acatcgtact acacgacacg tactacgttg 7020 tagctcactt ccactatgtc ctatcaatag gagctgtatt tgccatcata ggaggcttca 7080 ttcactgatt tcccctattc tcaggctaca ccctagacca aacctacgcc aaaatccatt 7140 tcgctatcat attcatcggc gtaaatctaa ctttcttccc acaacacttt ctcggcctat 7200 ccggaatgcc ccgacgttac tcggactacc ccgatgcata caccacatga aatatcctat 7260 catctgtagg ctcattcatt tctctaacag cagtaatatt aataattttc atgatttgag 7320 aagccttcgc ttcgaagcga aaagtcctaa tagtagaaga accctccata aacctggagt 7380 gactatatgg atgcccccca ccctaccaca cattcgaaga acccgtatac ataaaatcta 7440 gacaaaaaag gaaggaatcg aaccccccaa agctggtttc aagccaaccc catggcctcc 7500 atgacttttt caaaaagata ttagaaaaac catttcataa ctttgtcaaa gttaaattat 7560 aggctaaatc ctatatatct taatggcaca tgcagcgcaa gtaggtctac aagacgctac 7620 ttcccctatc atagaagagc ttatcacctt tcatgatcac gccctcataa tcattttcct 7680 tatctgcttc ctagtcctgt atgccctttt cctaacactc acaacaaaac taactaatac 7740 taacatctca gacgctcagg aaatagaaac cgtctgaact atcctgcccg ccatcatcct 7800 agtcctcatc gccctcccat ccctgcgcat cctttacata acagacgagg tcaacgatcc 7860 ctcccttacc atcaaatcaa ttggccacca atggtactga acctacgagt acaccgacta 7920 cggcggacta atcttcaact cctacatact tcccccatta ttcctagaac caggcgacct 7980 gcgactcctt gacgttgaca atcgagtagt actcccgatt gaagccccca ttcgtataat 8040 aattacatca caagacgtct tgcactcatg agctgtcccc acattaggct taaaaacaga 8100 tgcaattcca ggacgtctaa accaaaccac tttcaccgct acacgaccag gggtatacta 8160 cggtcaatgc tctgaaatct gtggagcaaa ccacagtttc atgcccatcg tcctagaatt 8220 aattccccta aaaatctttg aaataggacc cgtatttacc ctatagcacc ccctctaccc 8280 cctctagagc ccactgtaaa gctaacttag cattaacctt ttaagttaaa gattaagaga 8340 accaacacct ctttacagtg aaatgcccca actaaatact accgtatggc ccaccataat 8400 tacccccata ctccttacac tattcctcat cacccaacta aaaatattaa acacaaacta 8460 ccacttacct ccctcaccaa agcccataaa aataaaaaat tataacaaac cctgggaacc 8520 aaaatgaacg aaaatctgtt cgcttcattc attgccccca caatcctagg cctacccgcc 8580 gcagtactga tcattctatt tccccctcta ttgatcccca cctccaaata tctcatcaac 8640 aaccgactaa ttaccaccca acaatgacta atcaaactaa cctcaaaaca aatgatagcc 8700 atacacaaca ctaaaggacg aacctgatct cttatactag tatccttaat catttttatt 8760 gccacaacta acctcctcgg actcctgcct cactcattta caccaaccac ccaactatct 8820 ataaacctag ccatggccat ccccttatga gcgggcgcag tgattatagg ctttcgctct 8880 aagattaaaa atgccctagc ccacttctta ccacaaggca cacctacacc ccttatcccc 8940 atactagtta ttatcgaaac catcagccta ctcattcaac caatagccct ggccgtacgc 9000 ctaaccgcta acattactgc aggccaccta ctcatgcatc taattggaag cgccacccta 9060 gcaatatcaa ccattaacct tccctctaca cttatcatct tcacaattct aattctactg 9120 actatcctag aaatcgctgt cgccttgatc caagcctacg ttttcacact tctagtaagc 9180 ctctacctgc acgacaacac ataatgaccc accaatcaca tgcctatcat atagtaaaac 9240 ccagcccatg acccctaaca ggggccctct cagccctcct aatgacctcc ggcctagcca 9300 tgtgatttca cttccactcc ataacgctcc tcatactagg cctgctaacc aacacactaa 9360 ccatatacca atgatggcgc gatgtaacac gagaaagcac ataccaaggc caccacacac 9420 cacctgtcca aaaaagcctt cgatacggga taatcctatt tattacctca gaagtttttt 9480 tcttcgcagg atttttctga gccttttacc actccagcct agcccctacc ccccaactag 9540 gagggcactg gcccccaaca ggcatcaccc cgctaaatcc cctagaagtc ccactcctaa 9600 acacatccgt attactcgca tcaggagtat caatcacctg agctcaccat agtctaatag 9660 aaaacaaccg aaaccaaata attcaagcac tgcttattac aattttactg ggtctctatt 9720 ttaccctcct acaagcctca gagtacttcg aatctccctt caccatttcc gacggcatct 9780 acggctcaac attttttgta gccacaggct tccacggact tcacgtcatt attggctcaa 9840 ctttcctcac tatctgcttc atccgccaac taatatttca ctttacatcc aaacatcact 9900 ttggcttcga agccgccgcc tgatactggc attttgtaga tgtggtttga ctatttctgt 9960 atgtctccat ctattgatga gggtcttact cttttagtat aaatagtacc gttaacttcc 10020 aattaactag ttttgacaac attcaaaaaa gagtaataaa cttcgcctta attttaataa 10080 tcaacaccct cctagcctta ctactaataa ttattacatt ttgactacca caactcaacg 10140 gctacataga aaaatccacc ccttacgagt gcggcttcga ccctatatcc cccgcccgcg 10200 tccctttctc cataaaattc ttcttagtag ctattacctt cttattattt gatctagaaa 10260 ttgccctcct tttaccccta ccatgagccc tacaaacaac taacctgcca ctaatagtta 10320 tgtcatccct cttattaatc atcatcctag ccctaagtct ggcctatgag tgactacaaa 10380 aaggattaga ctgagccgaa ttggtatata gtttaaacaa aacgaatgat ttcgactcat 10440 taaattatga taatcatatt taccaaatgc ccctcattta cataaatatt atactagcat 10500 ttaccatctc acttctagga atactagtat atcgctcaca cctcatatcc tccctactat 10560 gcctagaagg aataatacta tcgctattca ttatagctac tctcataacc ctcaacaccc 10620 actccctctt agccaatatt gtgcctattg ccatactagt ttttgccgcc tgcgaagcag 10680 cggtaggcct agccctacta gtctcaatct ccaacacata tggcctagac tacgtacata 10740 acctaaacct actccaatgc taaaactaat cgtcccaaca attatattac taccactgac 10800 atgactctcc aaaaaacaca taatttgaat caacacaacc acccacagcc taattattag 10860 catcatcccc ctactatttt ttaaccaaat caacaacaac ctatttagct gctccccaac 10920 cttttcctcc gaccccctaa caacccccct cctaatacta actacctgac tcctacccct 10980 cacaatcatg gcaagccaac gccacttatc cagtgaacca ctatcacgaa aaaaactcta 11040 cctctctata ctaatctccc tacaaatctc cttaattata acattcacag ccacagaact 11100 aatcatattt tatatcttct tcgaaaccac acttatcccc accttggcta tcatcacccg 11160 atgaggcaac cagccagaac gcctgaacgc aggcacatac ttcctattct acaccctagt 11220 aggctccctt cccctactca tcgcactaat ttacactcac aacaccctag gctcactaaa 11280 cattctacta ctcactctca ctgcccaaga actatcaaac tcctgagcca acaacttaat 11340 atgactagct tacacaatag cttttatagt aaagatacct ctttacggac tccacttatg 11400 actccctaaa gcccatgtcg aagcccccat cgccgggtca atagtacttg ccgcagtact 11460 cttaaaacta ggcggctatg gtataatacg cctcacactc attctcaacc ccctgacaaa 11520 acacatagcc taccccttcc ttgtactatc cctatgaggc ataattataa caagctccat 11580 ctgcctacga caaacagacc taaaatcgct cattgcatac tcttcaatca gccacatagc 11640 cctcgtagta acagccattc tcatccaaac cccctgaagc ttcaccggcg cagtcattct 11700 cataatcgcc cacggactta catcctcatt actattctgc ctagcaaact caaactacga 11760 acgcactcac agtcgcatca taatcctctc tcaaggactt caaactctac tcccactaat 11820 agctttttga tgacttctag caagcctcgc taacctcgcc ttacccccca ctattaacct 11880 actgggagaa ctctctgtgc tagtaaccac attctcctga tcaaatatca ctctcctact 11940 tacaggactc aacatactag tcacagccct atactccctc tacatattta ccacaacaca 12000 atgaggctca ctcacccacc acattaacaa cataaaaccc tcattcacac gagaaaacac 12060 cctcatgttc atacacctat cccccattct cctcctatcc ctcaaccccg acatcatcac 12120 cgggttttcc tcttgtaaat atagtttaac caaaacatca gattgtgaat ctgacaacag 12180 aggcttacga ccccttattt accgagaaag ctcacaagaa ctgctaactc acgcccccat 12240 gtctaacaac atggctttct caacttttaa aggataacag ctatccattg gtcttaggcc 12300 ccaaaaattt tggtgcaact ccaaataaaa gtaataacca tgcacactac tataaccacc 12360 ctaaccctga cttccctaat tccccccatc cttaccaccc tcgttaaccc taacaaaaaa 12420 aactcatacc cccattatgt aaaatccatt gtcgcatcca cctttattat cagtctcttc 12480 cccacaacaa tattcatgtg cctagaccaa gaagttatta tctcgaactg acactgagcc 12540 acaacccaaa caacccagct ctccctaagc ttcaaactag actacttctc cataatattc 12600 atccctgtag cattgttcgt tacatggtcc atcatagaat tctcactgtg atatataaac 12660 tcagacccaa acattaatca gttcttcaaa tatctactca ttttcctaat taccatgcta 12720 atcttagtta ccgctaacaa cctattccaa ctgttcatcg gctgagaggg cgtaggaatt 12780 atatccttct tgctcatcag ttgatgatac gcccgagcag atgccaacac agcagccatt 12840 caagcaatcc tatacaaccg tatcggcgat atcggtttca tcctcgcctt agcatgattt 12900 atcctacact ccaactcatg agacccacaa caaatagccc ttctaaacgc taatccaagc 12960 ctcaccccac tactaggcct cctcctagca gcagcaggca aatcagccca attaggtctc 13020 cacccctgac tcccctcagc catagaaggc cccaccccag tctcagccct actccactca 13080 agcactatag ttgtagcagg agtcttctta ctcatccgct tccactccct agcagaaaat 13140 agcccactaa tccaaactct aacactatgc ttaggcgcta tcaccactct gttcgcagca 13200 gtctgcgccc ttacacaaaa tgacatcaaa aaaatcgtag ccttctccac ttcaagtcaa 13260 ctaggactca tagtagttac aatcggcatc aaccaaccac acctagcatt cctgcacatc 13320 tgtacccacg ccttcttcaa agccatacta tttatgtgct ccgggtccat catccacaac 13380 cttaacaatg aacaagatat tcgaaaaata ggaggactac tcaaaaccat acctctcact 13440 tcaacctccc tcaccattgg cagcctagca ttagcaggaa tacctttcct cacaggtttc 13500 tattccaaag accacatcat cgaaaccgca aacatatcat acacaaacgc ctgagcccta 13560 tctattactc tcatcgctac ctccctgaca agcgcctata gcactcgaat aattcttctc 13620 accctaacag gtcaacctcg cttccctacc cttactaaca ttaacgaaaa taaccccacc 13680 ctactaaacc ccattaaacg cctggcagcc ggaagcctat tcgcaggatt tctcattact 13740 aacaacattt cccccacatc ccccttccaa acaacaatcc ccctctacct aaaactcaca 13800 gccctcgctg tcactttcct aggacttcta acagccctag acctcaacta cctaaccaac 13860 aaacttaaaa taaaatcccc actatgcaca ttttatttct ccaacatact cggattctac 13920 cctagcatca cacaccgcac aatcccctat ctaggccttc ttacgagcca aaacctgccc 13980 ctactcctcc tagacctaac ctgactagaa aagctattac ctaaaacaat ttcacagcac 14040 caaatctcca cctccatcat cacctcaacc caaaaaggca taattaaact ttacttcctc 14100 tctttcttct tcccactcat cctaacccta ctcctaatca cataacctat tcccccgagc 14160 aatctcaatt acaatatata caccaacaaa caatgttcaa ccagtaacta ctactaatca 14220 acgcccataa tcatacaaag cccccgcacc aataggatcc tcccgaatca accctgaccc 14280 ctctccttca taaattattc agcttcctac actattaaag tttaccacaa ccaccacccc 14340 atcatactct ttcacccaca gcaccaatcc tacctccatc gctaacccca ctaaaacact 14400 caccaagacc tcaacccctg acccccatgc ctcaggatac tcctcaatag ccatcgctgt 14460 agtatatcca aagacaacca tcattccccc taaataaatt aaaaaaacta ttaaacccat 14520 ataacctccc ccaaaattca gaataataac acacccgacc acaccgctaa caatcaatac 14580 taaaccccca taaataggag aaggcttaga agaaaacccc acaaacccca ttactaaacc 14640 cacactcaac agaaacaaag catacatcat tattctcgca cggactacaa ccacgaccaa 14700 tgatatgaaa aaccatcgtt gtatttcaac tacaagaaca ccaatgaccc caatacgcaa 14760 aattaacccc ctaataaaat taattaacca ctcattcatc gacctcccca ccccatccaa 14820 catctccgca tgatgaaact tcggctcact ccttggcgcc tgcctgatcc tccaaatcac 14880 cacaggacta ttcctagcca tgcactactc accagacgcc tcaaccgcct tttcatcaat 14940 cgcccacatc actcgagacg taaattatgg ctgaatcatc cgctaccttc acgccaatgg 15000 cgcctcaata ttctttatct gcctcttcct acacatcggg cgaggcctat attacggatc 15060 atttctctac tcagaaacct gaaacatcgg cattatcctc ctgcttgcaa ctatagcaac 15120 agccttcata ggctatgtcc tcccgtgagg ccaaatatca ttctgagggg ccacagtaat 15180 tacaaactta ctatccgcca tcccatacat tgggacagac ctagttcaat gaatctgagg 15240 aggctactca gtagacagtc ccaccctcac acgattcttt acctttcact tcatcttgcc 15300 cttcattatt gcagccctag cagcactcca cctcctattc ttgcacgaaa cgggatcaaa 15360 caacccccta ggaatcacct cccattccga taaaatcacc ttccaccctt actacacaat 15420 caaagacgcc ctcggcttac ttctcttcct tctctcctta ataacattaa cactattctc 15480 accagacctc ctaggcgacc cagacaatta taccctagcc aaccccttaa acacccctcc 15540 ccacattaag cccgaatgat atttcctatt cgcctacaca attctccgat ccgtccctaa 15600 caaactagga ggcgtccttg ccctattact atccatcctc atcctagcaa taatccccat 15660 cctccatata tccaaacaac aaagcataat atttcgccca ctaagccaat cactttattg 15720 actcctagcc gcagacctcc tcattctaac ctgaatcgga ggacaaccag taagctaccc 15780 ttttaccatc attggacaag tagcatccgt actatacttc acaacaatcc taatcctaat 15840 accaactatc tccctaattg aaaacaaaat actcaaatgg gcctgtcctt gtagtataaa 15900 ctaatacacc agtcttgtaa accggaaatg aaaacctctt tccaagggca aatcagagaa 15960 aaagtcttta actccaccat tagcacccaa agctaagatt ctaatttaaa ctattctctg 16020 ttctttcatg gggaagcaga tttgggtacc acccaagtat tgactcaccc atcaacaacc 16080 gctatgtatt tcgtacatta ctgccagcca ccatgaatat tgtacggtac cataaatact 16140 tgaccacctg tagtacataa aaatccaatc cacatcaaaa ccctcccccc atgcttacaa 16200 gcaagtacag caatcaacct tcaactgtca tacatcaatc gcaactccaa agccacccct 16260 cacccactag gataccaaca aacctaccca cccttaacag tacatagcac ataaagccat 16320 ttaccgtaca tagcacatta cagtcaaatc ccttctcgtc cccatggatg acccccctca 16380 gataggggtc ccttgaccac catcctccgt gaaatcaata tcccgcacaa gagtgctact 16440 ctcctcgctc cgggcccata acacttgggg gtagctaaag tgaactgtat ccgacatctg 16500 gttcctactt cagggccata aagcctaaat agcccacacg ttccccttaa ataagacatc 16560 acgatg 16566 // ID KC345812; SV 1; circular; genomic DNA; STD; HUM; 16566 BP. XX AC KC345812; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT5_027 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16566 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16566 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; 2e06236a29b7f49207fcca5d3fc645e3. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16566 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT5_027" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="G||ana" FT /db_xref="taxon:9606" FT /haplogroup="L0d1" FT D-loop complement(join(16021..16566,1..574)) FT tRNA 575..645 FT /product="tRNA-Phe" FT rRNA 646..1599 FT /product="12S ribosomal RNA" FT tRNA 1600..1668 FT /product="tRNA-Val" FT rRNA 1669..3226 FT /product="16S ribosomal RNA" FT tRNA 3227..3301 FT /product="tRNA-Leu" FT gene 3304..4259 FT /gene="ND1" FT CDS 3304..4259 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4258..4259,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q4GRH9" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:Q4GRH9" FT /protein_id="AGD82511.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPTTISSIPPQT" FT tRNA 4260..4328 FT /product="tRNA-Ile" FT tRNA complement(4326..4397) FT /product="tRNA-Gln" FT tRNA 4399..4466 FT /product="tRNA-Met" FT gene 4467..5508 FT /gene="ND2" FT CDS 4467..5508 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5508,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9T3Q5" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9T3Q5" FT /protein_id="AGD82512.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5509..5573 FT /product="tRNA-Trp" FT tRNA complement(5584..5652) FT /product="tRNA-Ala" FT tRNA complement(5654..5726) FT /product="tRNA-Asn" FT tRNA complement(5758..5823) FT /product="tRNA-Cys" FT tRNA complement(5823..5888) FT /product="tRNA-Tyr" FT gene 5901..7442 FT /gene="COX1" FT CDS 5901..7442 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B1J9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B1J9" FT /protein_id="AGD82513.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7442..7513) FT /product="tRNA-Ser" FT tRNA 7515..7582 FT /product="tRNA-Asp" FT gene 7583..8266 FT /gene="COX2" FT CDS 7583..8266 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /protein_id="AGD82514.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8292..8361 FT /product="tRNA-Lys" FT gene 8363..8569 FT /gene="ATP8" FT CDS 8363..8569 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82515.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8524..9204 FT /gene="ATP6" FT CDS 8524..9204 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B185" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B185" FT /protein_id="AGD82516.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9204..9987 FT /gene="COX3" FT CDS 9204..9987 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9987,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q2HJS3" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q2HJS3" FT /protein_id="AGD82517.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKSLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9988..10055 FT /product="tRNA-Gly" FT gene 10056..10401 FT /gene="ND3" FT CDS 10056..10401 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10401,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82518.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWAE" FT tRNA 10402..10466 FT /product="tRNA-Arg" FT gene 10467..10763 FT /gene="ND4L" FT CDS 10467..10763 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AGD82519.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10757..12134 FT /gene="ND4" FT CDS 10757..12134 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12134,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82520.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12135..12203 FT /product="tRNA-His" FT tRNA 12204..12262 FT /product="tRNA-Ser" FT tRNA 12263..12333 FT /product="tRNA-Leu" FT gene 12334..14145 FT /gene="ND5" FT CDS 12334..14145 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q4EYP3" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q4EYP3" FT /protein_id="AGD82521.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHSLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPTSPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14146..14670) FT /gene="ND6" FT CDS complement(14146..14670) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82522.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14671..14739) FT /product="tRNA-Glu" FT gene 14744..15884 FT /gene="CYTB" FT CDS 14744..15884 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15884,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q6VJ80" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q6VJ80" FT /protein_id="AGD82523.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15885..15950 FT /product="tRNA-Thr" FT tRNA complement(15952..16020) FT /product="tRNA-Pro" XX SQ Sequence 16566 BP; 5128 A; 5175 C; 2167 G; 4096 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcgaac atacctatta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattaaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct ccccccgctt ctggccacag cacttaaaca catctctgcc aaaccccaaa 360 aacaaagaac cctaacacca gcctaaccag atttcaaatt ttatcttttg gcggtatgca 420 cttttaacag tcacccccca actaacacat tatttttccc tcccactccc atactactaa 480 tctcatcaat acaaccccgc ccatcctacc cagcacacac accgctgcta accccatacc 540 ccgaaccaac caaaccccaa agacaccccc cacagtttat gtagcttacc tcctcaaagc 600 aatacactga aaatgtttag acgggctcac atcaccccat aaacaaatag gtttggtcct 660 agcctttcta ttagctctta gtaagattac acatgcaagc atccccgttc cagtgaattc 720 accctctaaa tcaccacgat caaaagggac aagcatcaag cacgcaacaa tgcagctcaa 780 aacgcttagc ctagccacac ccccacggga aacagcagtg ataaaccttt agcaataaac 840 gaaagtttaa ctaagctata ctaaccccag ggttggtcaa tttcgtgcca gccaccgcgg 900 tcacacgatt aacccaagtc aatagaagcc ggcgtaaaga gtgttttaga tcaccccctc 960 cccaataaag ctaaaactca cctgagttgt aaaaaactcc agttgacaca aaataaacta 1020 cgaaagtggc tttaacatat ctgaatacac aatagctaag acccaaactg ggattagata 1080 ccccactatg cttagcccta aacctcaaca gttaaatcaa caaaactgct cgccagaaca 1140 ctacgagcca cagcttaaaa ctcaaaggac ctggcggtgc ttcatatccc tctagaggag 1200 cctgttctgt aatcgataaa ccccgatcaa cctcaccacc tcttgctcag cctatatacc 1260 gccatcttca gcaaaccctg atgaaggcta caaagtaagc gcaagtaccc acgtaaagac 1320 gttaggtcaa ggtgtagccc atgaggtggc aagaaatggg ctacattttc taccccagaa 1380 aactacgata gcccttatga aacttaaggg tcgaaggtgg atttagcagt aaactaagag 1440 tagagtgctt agttgaacag ggccctgaag cgcgtacaca ccgcccgtca ccctcctcaa 1500 gtatacttca aaggacattt aactaaaacc cctacgcatt tatatagagg agacaagtcg 1560 taacatggta agtgtactgg aaagtgcact tggacgaacc agagtgtagc ttaacacaaa 1620 gcacccaact tacacttagg agatttcaac ttaacttgac cgctctgagc taaacctagc 1680 cccaaaccca ctccacctta ctaccagaca accttagcca aaccatttac ccaaataaag 1740 tataggcgat agaaattgaa acctggcgca atagatatag taccgcaagg gaaagatgaa 1800 aaattataac caagcataat atagcaagga ctaaccccta taccttctgc ataatgaatt 1860 aactagaaat aactttgcaa ggagagccaa agctaagacc cccgaaacca gacgagctac 1920 ctaagaacag ctaaaagagc acacccgtct atgtagcaaa atagtgggaa gatttatagg 1980 tagaggcgac aaacctaccg agcctggtga tagctggttg tccaagatag aatcttagtt 2040 caactttaaa tttgcccaca gaaccctcta aatccccttg taaatttaac tgttagtcca 2100 aagaggaaca gctctttgga cactaggaaa aaaccttgta gagagagtaa aaaatttaac 2160 acccatagta ggcctaaaag cagccaccaa ttaagaaagc gttcaagctc aacacccact 2220 acctaaaaaa tcccaaacat ataactgaac tcctcacacc caattggacc aatctatcac 2280 cctatagaag aactaatgtt agtataagta acatgaaaac attctcctcc gcataagcct 2340 gcgtcagatt aaaacactga actgacaatt aacagcccaa tatctacaat caaccaacaa 2400 gtcattatta ccctcactgt caacccaaca caggcatgct cataaggaaa ggttaaaaaa 2460 agtaaaagga actcggcaaa tcttaccccg cctgtttacc aaaaacatca cctctagcat 2520 caccagtatt agaggcaccg cctgcccagt gacacatgtt taacggccgc ggtaccctaa 2580 ccgtgcaaag gtagcataat cacttgttcc ttaaataggg acctgtatga atggctccac 2640 gagggttcag ctgtctctta cttttaacca gtgaaattga cctgcccgtg aagaggcggg 2700 cataacacag caagacgaga agaccctatg gagctttaat ttattaatgc aaacaatacc 2760 taacaaaccc acaggtccta aactaccaaa cctgcattaa aaatttcggt tggggcgacc 2820 tcggagcaga acccaacctc cgagcagtac atgctaagac ttcaccagtc aaagcgaact 2880 accatactca attgatccaa taacttgacc aacggaacaa gttaccctag ggataacagc 2940 gcaatcctat tctagagtcc atatcaacaa tagggtttac gacctcgatg ttggatcagg 3000 acatcccgat ggtgcagccg ctattaaagg ttcgtttgtt caacgattaa agtcctacgt 3060 gatctgagtt cagaccggag taatccaggt cggtttctat ctacttcaaa ttcctccctg 3120 tacgaaagga caagagaaat aaggcctact tcacaaagcg ccttcccccg taaatgatat 3180 catctcaact tagtattata cccacaccca cccaagaaca gggtttgtta agatggcaga 3240 gcccggtaat cgcataaaac ttaaaacttt acagtcagag gttcaattcc tcttcttaac 3300 aacataccca tggccaacct cctactcctc attgtaccca ttctaatcgc aatggcattc 3360 ctaatgctta ccgaacgaaa aattctaggc tatatacaac tacgcaaagg ccccaacgtt 3420 gtaggcccct acggactact acaacccttc gctgacgcca taaaactctt caccaaagag 3480 cccctaaaac ccgccacatc taccatcacc ctatacatca ccgccccgac cttagctctc 3540 accatcgctc ttctactatg aacccccctc cccataccca accccctggt taacctcaac 3600 ctaggcctcc tatttattct agccacctct agcctagccg tttactcaat cctctgatca 3660 ggatgagcat caaactcaaa ctacgccctg atcggcgcac tgcgagcagt agcccaaaca 3720 atctcatatg aagtcaccct agccatcatt ctgctatcaa cattactaat aagtggctcc 3780 tttaacctct ccacccttat cacaacacaa gaacacctct gattactcct gccatcatga 3840 cccttggcca taatatgatt tatctccaca ctagcagaga ccaaccgaac ccccttcgac 3900 cttgccgaag gggagtccga actagtctca ggcttcaaca tcgaatacgc cgcaggcccc 3960 ttcgccctat tcttcatagc cgaatacaca aacattatta taataaacac cctcaccact 4020 acaatcttcc taggaacaac atatgacgca ctctcccctg aactctacac aacatatttt 4080 gtcaccaaga ccctacttct gacctccctg ttcttatgaa ttcgaacagc atacccccga 4140 ttccgctacg accaactcat acacctccta tgaaaaaact tcctaccact cactctagca 4200 ttacttatat gatatgtctc catacccact acaatctcca gcattccccc tcaaacctaa 4260 gaaatatgtc tgataaaaga gttactttga tagagtaaat aataggagtt taaaccccct 4320 tatttctagg actatgagaa tcgaacccat ccctgagaat ccaaaattct ccgtgccacc 4380 tatcacaccc catcctaaag taaggtcagc taaataagct atcgggccca taccccgaaa 4440 atgttggtta tacccttccc gtactaatta atcccctggc ccaacccgtc atctactcta 4500 ccatctttgc aggcacactc atcacagcgc taagctcgca ctgatttttt acctgagtag 4560 gcctagaaat aaacatgcta gcttttattc cagttctaac caaaaaaata aaccctcgtt 4620 ccacagaagc tgccatcaag tatttcctca cgcaagcaac cgcatccata atccttctaa 4680 tagctatcct cttcaacaat atactctccg gacaatgaac cataaccaat actaccaatc 4740 aatactcatc attaataatc ataatggcta tagcaataaa actaggaata gccccctttc 4800 acttctgagt cccagaggtt acccaaggca cccctctgac atccggcctg cttcttctca 4860 catgacaaaa actagccccc atctcaatca tataccaaat ctctccctca ctaaacgtaa 4920 gccttctcct cactctctca atcttatcca tcatagcagg cagttgaggt ggattaaacc 4980 aaacccagct acgcaaaatc ttagcatact cctcaattac ccacatagga tgaataatag 5040 cagttctacc gtacaaccct aacataacca ttcttaattt aactatttat attatcctaa 5100 ctactaccgc attcctacta ctcaacttaa actccagcac cacgacccta ctactatctc 5160 gcacctgaaa caagctaaca tgactaacac ccttaattcc atccaccctc ctctccctag 5220 gaggcctgcc cccgctaacc ggctttttgc ccaaatgggc cattatcgaa gaattcacaa 5280 aaaacaatag cctcatcatc cccaccatca tagccaccat caccctcctt aacctctact 5340 tctacctacg cctaatctac tccacctcaa tcacactact ccccatatct aacaacgtaa 5400 aaataaaatg acagtttgaa catacaaaac ccaccccact cctccccaca ctcatcgccc 5460 ttaccacgct actcctacct atctcccctt ttatactaat aatcttatag aaatttaggt 5520 taaatacaga ccaagagcct tcaaagccct cagtaagttg caatacttaa tttctgtaac 5580 agctaaggac tgcaaaaccc cactctgcat caactgaacg caaatcagcc actttaatta 5640 agctaagccc ttactagacc aatgggactt aaacccacaa acacttagtt aacagctaag 5700 caccctaatc aactggcttc aatctacttc tcccgccgcc gggaaaaaag gcgggagaag 5760 ccccggcagg tttgaagctg cttcttcgaa tttgcaattc aatatgaaaa tcacctcgga 5820 gctggtaaaa agaggcctaa cccctgtctt tagatttaca gtccaatgct tcactcagcc 5880 attttacctc acccccactg atgttcgccg accgttgact attctctaca aaccacaaag 5940 acattggaac actataccta ttattcggcg catgagctgg agtcctaggc acagctctaa 6000 gcctccttat tcgagccgag ctgggccagc caggcaacct tctaggtaac gaccacatct 6060 acaacgttat cgtcacagcc catgcatttg taataatctt cttcatagta atacccatca 6120 taatcggagg ctttggcaac tgactagttc ccctaataat cggtgccccc gatatggcgt 6180 tcccccgcat aaacaacata agcttctgac tcttacctcc ctctctccta ctcctgctcg 6240 catctgctat agtggaggcc ggggcaggaa caggttgaac agtctaccct cccttagcag 6300 ggaactactc ccaccctgga gcctccgtag acctaaccat cttctcctta cacctagcag 6360 gtgtctcctc tatcttaggg gccatcaatt tcatcacaac aattatcaat ataaaacccc 6420 ctgccataac ccaataccaa acgcccctct tcgtctgatc cgtcctaatc acagcagtcc 6480 tacttctcct atctctccca gtcctagctg ctggcatcac tatactacta acagaccgca 6540 acctcaacac caccttcttc gaccccgccg gaggaggaga ccccattcta taccaacacc 6600 tattctgatt tttcggtcac cctgaagttt atattcttat cctaccaggc ttcggaataa 6660 tctcccatat tgtaacttac tactccggaa aaaaagaacc atttggatac ataggtatgg 6720 tctgagctat gatatcaatt ggcttcctag ggtttatcgt gtgagcacac catatattta 6780 cagtaggaat agacgtagac acacgagcat acttcacctc cgctaccata atcatcgcta 6840 tccccaccgg cgtcaaagta tttagctgac tcgccacact ccacggaagc aatatgaaat 6900 gatctgctgc agtgctctga gccctaggat tcatctttct tttcaccgta ggtggcctga 6960 ctggcattgt attagcaaac tcatcactag acatcgtact acacgacacg tactacgttg 7020 tagctcactt ccactatgtc ctatcaatag gagctgtatt tgccatcata ggaggcttca 7080 ttcactgatt tcccctattc tcaggctaca ccctagacca aacctacgcc aaaatccatt 7140 tcgctatcat attcatcggc gtaaatctaa ctttcttccc acaacacttt ctcggcctat 7200 ccggaatgcc ccgacgttac tcggactacc ccgatgcata caccacatga aatatcctat 7260 catctgtagg ctcattcatt tctctaacag cagtaatatt aataattttc atgatttgag 7320 aagccttcgc ttcgaagcga aaagtcctaa tagtagaaga accctccata aacctggagt 7380 gactatatgg atgcccccca ccctaccaca cattcgaaga acccgtatac ataaaatcta 7440 gacaaaaaag gaaggaatcg aaccccccaa agctggtttc aagccaaccc catggcctcc 7500 atgacttttt caaaaagata ttagaaaaac catttcataa ctttgtcaaa gttaaattat 7560 aggctaaatc ctatatatct taatggcaca tgcagcgcaa gtaggtctac aagacgctac 7620 ttcccctatc atagaagagc ttatcacctt tcatgatcac gccctcataa tcattttcct 7680 tatctgcttc ctagtcctgt atgccctttt cctaacactc acaacaaaac taactaatac 7740 taacatctca gacgctcagg aaatagaaac cgtctgaact atcctgcccg ccatcatcct 7800 agtcctcatc gccctcccat ccctgcgcat cctttacata acagacgagg tcaacgatcc 7860 ctcccttacc atcaaatcaa ttggccacca atggtactga acctacgagt acaccgacta 7920 cggcggacta atcttcaact cctacatact tcccccatta ttcctagaac caggcgacct 7980 gcgactcctt gacgttgaca atcgagtagt actcccgatt gaagccccca ttcgtataat 8040 aattacatca caagacgtct tgcactcatg agctgtcccc acattaggct taaaaacaga 8100 tgcaattcca ggacgtctaa accaaaccac tttcaccgct acacgaccag gggtatacta 8160 cggtcaatgc tctgaaatct gtggagcaaa ccacagtttc atgcccatcg tcctagaatt 8220 aattccccta aaaatctttg aaataggacc cgtatttacc ctatagcacc ccctctaccc 8280 cctctagagc ccactgtaaa gctaacttag cattaacctt ttaagttaaa gattaagaga 8340 accaacacct ctttacagtg aaatgcccca actaaatact accgtatggc ccaccataat 8400 tacccccata ctccttacac tattcctcat cacccaacta aaaatattaa acacaaacta 8460 ccacttacct ccctcaccaa agcccataaa aataaaaaat tataacaaac cctgagaacc 8520 aaaatgaacg aaaatctgtt cgcttcattc attgccccca caatcctagg cctacccgcc 8580 gcagtactga tcattctatt tccccctcta ttgatcccca cctccaaata tctcatcaac 8640 aaccgactaa ttaccaccca acaatgacta atcaaactaa cctcaaaaca aatgatagcc 8700 atacacaaca ctaaaggacg aacctgatct cttatactag tatccttaat catttttatt 8760 gccacaacta acctcctcgg actcctgcct cactcattta caccaaccac ccaactatct 8820 ataaacctag ccatggccat ccccttatga gcgggcgcag tgattatagg ctttcgctct 8880 aagattaaaa atgccctagc ccacttctta ccacaaggca cacctacacc ccttatcccc 8940 atactagtta ttatcgaaac catcagccta ctcattcaac caatagccct ggccgtacgc 9000 ctaaccgcta acattactgc aggccaccta ctcatgcatc taattggaag cgccacccta 9060 gcaatatcaa ccattaacct tccctctaca cttatcatct tcacaattct aattctactg 9120 actatcctag aaatcgctgt cgccttgatc caagcctacg ttttcacact tctagtaagc 9180 ctctacctgc acgacaacac ataatgaccc accaatcaca tgcctatcat atagtaaaac 9240 ccagcccatg acccctaaca ggggccctct cagccctcct aataacctcc ggcctagcca 9300 tgtgatttca cttccactcc ataacgctcc tcatactagg cctgctaacc aacacactaa 9360 ccatatacca atgatggcgc gatgtaacac gagaaagcac ataccaaggc caccacacac 9420 cacctgtcca aaaaagcctt cgatacggga taatcctatt tattacctca gaagtttttt 9480 tcttcgcagg atttttctga gccttttacc actccagcct agcccctacc ccccaactag 9540 gagggcactg gcccccaaca ggcatcaccc cgctaaatcc cctagaagtc ccactcctaa 9600 acacatccgt attactcgca tcaggagtat caatcacctg agctcaccat agtctaatag 9660 aaaacaaccg aaaccaaata attcaagcac tgcttattac aattttactg ggtctctatt 9720 ttaccctcct acaagcctca gagtacttcg aatctccctt caccatttcc gacggcatct 9780 acggctcaac attttttgta gccacaggct tccacggact tcacgtcatt attggctcaa 9840 ctttcctcac tatctgcttc atccgccaac taatatttca ctttacatcc aaacatcact 9900 ttggcttcga agccgccgcc tgatactggc attttgtaga tgtggtttga ctatttctgt 9960 atgtctccat ctattgatga gggtcttact cttttagtat aaatagtacc gttaacttcc 10020 aattaactag ttttgacaac attcaaaaaa gagtaataaa cttcgcctta attttaataa 10080 tcaacaccct cctagcctta ctactaataa ttattacatt ttgactacca caactcaacg 10140 gctacataga aaaatccacc ccttacgagt gcggcttcga ccctatatcc cccgcccgcg 10200 tccctttctc cataaaattc ttcttagtag ctattacctt cttattattt gatctagaaa 10260 ttgccctcct tttaccccta ccatgagccc tacaaacaac taacctgcca ctaatagtta 10320 tgtcatccct cttattaatc atcatcctag ccctaagtct ggcctatgag tgactacaaa 10380 aaggattaga ctgagccgaa ttggtatata gtttaaacaa aacgaatgat ttcgactcat 10440 taaattatga taatcatatt taccaaatgc ccctcattta cataaatatt atactagcat 10500 ttaccatctc acttctagga atactagtat atcgctcaca cctcatatcc tccctactat 10560 gcctagaagg aataatacta tcgctattca ttatagctac tctcataacc ctcaacaccc 10620 actccctctt agccaatatt gtgcctattg ccatactagt ttttgccgcc tgcgaagcag 10680 cggtaggcct agccctacta gtctcaatct ccaacacata tggcctagac tacgtacata 10740 acctaaacct actccaatgc taaaactaat cgtcccaaca attatattac taccactgac 10800 atgactctcc aaaaaacaca taatttgaat caacacaacc acccacagcc taattattag 10860 catcatcccc ctactatttt ttaaccaaat caacaacaac ctatttagct gctccccaac 10920 cttttcctcc gaccccctaa caacccccct cctaatacta actacctgac tcctacccct 10980 cacaatcatg gcaagccaac gccacttatc cagtgaacca ctatcacgaa aaaaactcta 11040 cctctctata ctaatctccc tacaaatctc cttaattata acattcacag ccacagaact 11100 aatcatattt tatatcttct tcgaaaccac acttatcccc accttggcta tcatcacccg 11160 atgaggcaac cagccagaac gcctgaacgc aggcacatac ttcctattct acaccctagt 11220 aggctccctt cccctactca tcgcactaat ttacactcac aacaccctag gctcactaaa 11280 cattctacta ctcactctca ctgcccaaga actatcaaac tcctgagcca acaacttaat 11340 atgactagct tacacaatag cttttatagt aaagatacct ctttacggac tccacttatg 11400 actccctaaa gcccatgtcg aagcccccat cgccgggtca atagtacttg ccgcagtact 11460 cttaaaacta ggcggctatg gtataatacg cctcacactc attctcaacc ccctgacaaa 11520 acacatagcc taccccttcc ttgtactatc cctatgaggc ataattataa caagctccat 11580 ctgcctacga caaacagacc taaaatcgct cattgcatac tcttcaatca gccacatagc 11640 cctcgtagta acagccattc tcatccaaac cccctgaagc ttcaccggcg cagtcattct 11700 cataatcgcc cacggactta catcctcatt actattctgc ctagcaaact caaactacga 11760 acgcactcac agtcgcatca taatcctctc tcaaggactt caaactctac tcccactaat 11820 agctttttga tgacttctag caagcctcgc taacctcgcc ttacccccca ctattaacct 11880 actgggagaa ctctctgtgc tagtaaccac attctcctga tcaaatatca ctctcctact 11940 tacaggactc aacatactag tcacagccct atactccctc tacatattta ccacaacaca 12000 atgaggctca ctcacccacc acattaacaa cataaaaccc tcattcacac gagaaaacac 12060 cctcatgttc atacacctat cccccattct cctcctatcc ctcaaccccg acatcatcac 12120 cgggttttcc tcttgtaaat atagtttaac caaaacatca gattgtgaat ctgacaacag 12180 aggcttacga ccccttattt accgagaaag ctcacaagaa ctgctaactc acgcccccat 12240 gtctaacaac atggctttct caacttttaa aggataacag ctatccattg gtcttaggcc 12300 ccaaaaattt tggtgcaact ccaaataaaa gtaataacca tgcacactac tataaccacc 12360 ctaaccctga cttccctaat tccccccatc cttaccaccc tcgttaaccc taacaaaaaa 12420 aactcatacc cccattatgt aaaatccatt gtcgcatcca cctttattat cagtctcttc 12480 cccacaacaa tattcatgtg cctagaccaa gaagttatta tctcgaactg acactgagcc 12540 acaacccaaa caacccagct ctccctaagc ttcaaactag actacttctc cataatattc 12600 atccctgtag cattgttcgt tacatggtcc atcatagaat tctcactgtg atatataaac 12660 tcagacccaa acattaatca gttcttcaaa tatctactca ttttcctaat taccatgcta 12720 atcttagtta ccgctaacaa cctattccaa ctgttcatcg gctgagaggg cgtaggaatt 12780 atatccttct tgctcatcag ttgatgatac gcccgagcag atgccaacac agcagccatt 12840 caagcaatcc tatacaaccg tatcggcgat atcggtttca tcctcgcctt agcatgattt 12900 atcctacact ccaactcatg agacccacaa caaatagccc ttctaaacgc taatccaagc 12960 ctcaccccac tactaggcct cctcctagca gcagcaggca aatcagccca attaggtctc 13020 cacccctgac tcccctcagc catagaaggc cccaccccag tctcagccct actccactca 13080 agcactatag ttgtagcagg agtcttctta ctcatccgct tccactccct agcagaaaat 13140 agcccactaa tccaaactct aacactatgc ttaggcgcta tcaccactct gttcgcagca 13200 gtctgcgccc ttacacaaaa tgacatcaaa aaaatcgtag ccttctccac ttcaagtcaa 13260 ctaggactca tagtagttac aatcggcatc aaccaaccac acctagcatt cctgcacatc 13320 tgtacccacg ccttcttcaa agccatacta tttatgtgct ccgggtccat catccacaac 13380 cttaacaatg aacaagatat tcgaaaaata ggaggactac tcaaaaccat acctctcact 13440 tcaacctccc tcaccattgg cagcctagca ttagcaggaa tacctttcct cacaggtttc 13500 tattccaaag accacatcat cgaaaccgca aacatatcat acacaaacgc ctgagcccta 13560 tctattactc tcatcgctac ctccctgaca agcgcctata gcactcgaat aattcttctc 13620 accctaacag gtcaacctcg cttccctacc cttactaaca ttaacgaaaa taaccccacc 13680 ctactaaacc ccattaaacg cctggcagcc ggaagcctat tcgcaggatt tctcattact 13740 aacaacattt cccccacatc ccccttccaa acaacaatcc ccctctacct aaaactcaca 13800 gccctcgctg tcactttcct aggacttcta acagccctag acctcaacta cctaaccaac 13860 aaacttaaaa taaaatcccc actatgcaca ttttatttct ccaacatact cggattctac 13920 cctagcatca cacaccgcac aatcccctat ctaggccttc ttacgagcca aaacctgccc 13980 ctactcctcc tagacctaac ctgactagaa aagctattac ctaaaacaat ttcacagcac 14040 caaatctcca cctccatcat cacctcaacc caaaaaggca taattaaact ttacttcctc 14100 tctttcttct tcccactcat cctaacccta ctcctaatca cataacctat tcccccgagc 14160 aatctcaatt acaatatata caccaacaaa caatgttcaa ccagtaacta ctactaatca 14220 acgcccataa tcatacaaag cccccgcacc aataggatcc tcccgaatca accctgaccc 14280 ctctccttca taaattattc agcttcctac actattaaag tttaccacaa ccaccacccc 14340 atcatactct ttcacccaca gcaccaatcc tacctccatc gctaacccca ctaaaacact 14400 caccaagacc tcaacccctg acccccatgc ctcaggatac tcctcaatag ccatcgctgt 14460 agtatatcca aagacaacca tcattccccc taaataaatt aaaaaaacta ttaaacccat 14520 ataacctccc ccaaaattca gaataataac acacccgacc acaccgctaa caatcaatac 14580 taaaccccca taaataggag aaggcttaga agaaaacccc acaaacccca ttactaaacc 14640 cacactcaac agaaacaaag catacatcat tattctcgca cggactacaa ccacgaccaa 14700 tgatatgaaa aaccatcgtt gtatttcaac tacaagaaca ccaatgaccc caatacgcaa 14760 aattaacccc ctaataaaat taattaacca ctcattcatc gacctcccca ccccatccaa 14820 catctccgca tgatgaaact tcggctcact ccttggcgcc tgcctgatcc tccaaatcac 14880 cacaggacta ttcctagcca tgcactactc accagacgcc tcaaccgcct tttcatcaat 14940 cgcccacatc actcgagacg taaattatgg ctgaatcatc cgctaccttc acgccaatgg 15000 cgcctcaata ttctttatct gcctcttcct acacatcggg cgaggcctat attacggatc 15060 atttctctac tcagaaacct gaaacatcgg cattatcctc ctgcttgcaa ctatagcaac 15120 agccttcata ggctatgtcc tcccgtgagg ccaaatatca ttctgagggg ccacagtaat 15180 tacaaactta ctatccgcca tcccatacat tgggacagac ctagttcaat gaatctgagg 15240 aggctactca gtagacagtc ccaccctcac acgattcttt acctttcact tcatcttgcc 15300 cttcattatt gcagccctag cagcactcca cctcctattc ttgcacgaaa cgggatcaaa 15360 caacccccta ggaatcacct cccattccga taaaatcacc ttccaccctt actacacaat 15420 caaagacgcc ctcggcttac ttctcttcct tctctcctta ataacattaa cactattctc 15480 accagacctc ctaggcgacc cagacaatta taccctagcc aaccccttaa acacccctcc 15540 ccacattaag cccgaatgat atttcctatt cgcctacaca attctccgat ccgtccctaa 15600 caaactagga ggcgtccttg ccctattact atccatcctc atcctagcaa taatccccat 15660 cctccatata tccaaacaac aaagcataat atttcgccca ctaagccaat cactttattg 15720 actcctagcc gcagacctcc tcattctaac ctgaatcgga ggacaaccag taagctaccc 15780 ttttaccatc attggacaag tagcatccgt actatacttc acaacaatcc taatcctaat 15840 accaactatc tccctaattg aaaacaaaat actcaaatgg gcctgtcctt gtagtataaa 15900 ctaatacacc agtcttgtaa accggaaatg aaaacctctt tccaagggca aatcagagaa 15960 aaagtcttta actccaccat tagcacccaa agctaagatt ctaatttaaa ctattctctg 16020 ttctttcatg gggaagcaga tttgggtacc acccaagtat tgactcaccc atcaacaacc 16080 gctatgtatt tcgtacatta ctgccagcca ccatgaatat tgtacggtac cataaatact 16140 tgaccacctg tagtacataa aaatccaatc cacatcaaaa ccctcccccc atgcttacaa 16200 gcaagtacag caatcaacct tcaactgtca tacatcaatc gcaactccaa agccacccct 16260 cacccactag gataccaaca aacctaccca cccttaacag tacatagcac ataaagccat 16320 ttaccgtaca tagcacatta cagtcaaatc ccttctcgtc cccatggatg acccccctca 16380 gataggggtc ccttgaccac catcctccgt gaaatcaata tcccgcacaa gagtgctact 16440 ctcctcgctc cgggcccata acacttgggg gtagctaaag tgaactgtat ccgacatctg 16500 gttcctactt cagggccata aagcctaaat agcccacacg ttccccttaa ataagacatc 16560 acgatg 16566 // ID KC345813; SV 1; circular; genomic DNA; STD; HUM; 16566 BP. XX AC KC345813; XX DT 03-FEB-2013 (Rel. 115, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Homo sapiens isolate BOT5_033 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16566 RX DOI; 10.1016/j.ajhg.2012.12.010. RX PUBMED; 23332919. RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT "Ancient substructure in early mtDNA lineages of southern Africa"; RL Am. J. Hum. Genet. 92(2):285-292(2013). XX RN [2] RP 1-16566 RA Barbieri C., Vicente M., Rocha J., Mpoloka S.W., Stoneking M., RA Pakendorf B.; RT ; RL Submitted (16-DEC-2012) to the INSDC. RL Evolutionary Genetics, Max Planck for Evolutionary Anthropology, Deutscher RL Platz 6, Leipzig 04103, Germany XX DR MD5; 17e55cfb583fb446d0394b1f480fba3a. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. XX CC ##Assembly-Data-START## CC Assembly Method :: BWA v. 2012 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..16566 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="BOT5_033" FT /mol_type="genomic DNA" FT /country="Botswana" FT /isolation_source="G||ana" FT /db_xref="taxon:9606" FT /haplogroup="L0d1" FT D-loop complement(join(16021..16566,1..574)) FT tRNA 575..645 FT /product="tRNA-Phe" FT rRNA 646..1599 FT /product="12S ribosomal RNA" FT tRNA 1600..1668 FT /product="tRNA-Val" FT rRNA 1669..3226 FT /product="16S ribosomal RNA" FT tRNA 3227..3301 FT /product="tRNA-Leu" FT gene 3304..4259 FT /gene="ND1" FT CDS 3304..4259 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4258..4259,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q4GRH9" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:Q4GRH9" FT /protein_id="AGD82524.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPTTISSIPPQT" FT tRNA 4260..4328 FT /product="tRNA-Ile" FT tRNA complement(4326..4397) FT /product="tRNA-Gln" FT tRNA 4399..4466 FT /product="tRNA-Met" FT gene 4467..5508 FT /gene="ND2" FT CDS 4467..5508 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5508,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9B186" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9B186" FT /protein_id="AGD82525.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPLLPTLITLTTLLLPIS FT PFMLMIL" FT tRNA 5509..5573 FT /product="tRNA-Trp" FT tRNA complement(5584..5652) FT /product="tRNA-Ala" FT tRNA complement(5654..5726) FT /product="tRNA-Asn" FT tRNA complement(5758..5823) FT /product="tRNA-Cys" FT tRNA complement(5823..5888) FT /product="tRNA-Tyr" FT gene 5901..7442 FT /gene="COX1" FT CDS 5901..7442 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9B1J9" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:Q9B1J9" FT /protein_id="AGD82526.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7442..7513) FT /product="tRNA-Ser" FT tRNA 7515..7582 FT /product="tRNA-Asp" FT gene 7583..8266 FT /gene="COX2" FT CDS 7583..8266 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /protein_id="AGD82527.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8292..8361 FT /product="tRNA-Lys" FT gene 8363..8569 FT /gene="ATP8" FT CDS 8363..8569 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /protein_id="AGD82528.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8524..9204 FT /gene="ATP6" FT CDS 8524..9204 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B185" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B185" FT /protein_id="AGD82529.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9204..9987 FT /gene="COX3" FT CDS 9204..9987 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9987,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q2HJS3" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q2HJS3" FT /protein_id="AGD82530.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKSLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9988..10055 FT /product="tRNA-Gly" FT gene 10056..10401 FT /gene="ND3" FT CDS 10056..10401 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10401,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82531.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWAE" FT tRNA 10402..10466 FT /product="tRNA-Arg" FT gene 10467..10763 FT /gene="ND4L" FT CDS 10467..10763 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AGD82532.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10757..12134 FT /gene="ND4" FT CDS 10757..12134 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12134,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /protein_id="AGD82533.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12135..12203 FT /product="tRNA-His" FT tRNA 12204..12262 FT /product="tRNA-Ser" FT tRNA 12263..12333 FT /product="tRNA-Leu" FT gene 12334..14145 FT /gene="ND5" FT CDS 12334..14145 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q4EYP3" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q4EYP3" FT /protein_id="AGD82534.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHSLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPTSPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14146..14670) FT /gene="ND6" FT CDS complement(14146..14670) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /protein_id="AGD82535.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14671..14739) FT /product="tRNA-Glu" FT gene 14744..15884 FT /gene="CYTB" FT CDS 14744..15884 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15884,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:B1W913" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:B1W913" FT /protein_id="AGD82536.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLTADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIEN