ID KX687262; SV 1; linear; genomic DNA; STD; HUM; 13159 BP. XX AC KX687262; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH40 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*14_14e1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-13159 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-13159 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; d7826c86d9b4a7ef4bb250bd17a956a4. DR IMGT/HLA; HLA-DRB1*14:14; HLA00846. XX FH Key Location/Qualifiers FH FT source 1..13159 FT /organism="Homo sapiens" FT /isolate="IH40" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <172..>12372 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*14_14e1" FT mRNA join(<172..271,8262..8531,10780..11061,11763..11873, FT 12349..>12372) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*14_14e1" FT /product="MHC class II antigen" FT CDS join(172..271,8262..8531,10780..11061,11763..11873, FT 12349..>12372) FT /codon_start=1 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*14_14e1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1A1" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1A1" FT /protein_id="AST15776.1" FT /translation="MVCLRLPGGSCMAVLTVTLMVLSSPLALAGDTRPRFLEYSTSECH FT FFNGTERVRFLDRYFHNQEEFVRFDSDVGEYRAVTELGRPDAEYWNSQKDLLERRRAEV FT DTYCRHNYGVGESFTVQRRVHPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFRN FT GQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRARSE FT SAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPR" XX SQ Sequence 13159 BP; 3494 A; 2629 C; 3061 G; 3975 T; 0 other; gctattgaac tcagatgctg attcgttctc caacactaga ttacccaatc caggagcaag 60 gaaatcagta acttactcct ataacttgga atgtgggtgg aggggttcat agttctccct 120 gagtgagact tgcctgctgc tctggcccct ggtcctgtcc tgttctccag catggtgtgt 180 ctgaggctcc ctggaggctc ctgcatggca gttctgacag tgacactgat ggtgctgagc 240 tccccactgg ctttggctgg ggacaccaga cgtaagtgca cattgtgggt gctgagctac 300 tatggggtgg ggaaaatagg gagttttgtt aacattgtgc ccaggccatg taccttaaga 360 aattgtgacg tatttttcag agattgccca tctttatcat atggatccca aataatttcc 420 ccaccacaaa aggagcttgg ctacttgccc actccatgag acttgtgtaa ggggcctcca 480 tacaggtcat ttctactcaa atctccacca ataaaacctt tgcatcacat gtcctcaggg 540 tctttagagg atttagaaat aaggatgcta aaataaattc cccatacagc acttgccttt 600 attatgttga cttatgtcag acaaaaggag gttttttctg aaaattttgt ggaagtcaag 660 ggaatttaaa gggtctctcc taaacgatcc tgggttatgt cacccacagg acctttggtg 720 ttggcccctc ttcctcatat gtgaggatgg acccagtggc ctccccatta tctactttct 780 tttctttctg aactccaatg tttataaagc ctgtacccct gtagtgtatg taggttctct 840 gacagaagtt atacttagtg ctctttcttt cttgtgggga aaaatccctg gaactgaagc 900 tgagatcttt agtacttgga gtcaccttac agatacagag catttatgag gtattctttg 960 gtgcctaaag aacttaaggc atcctctgaa aacctggccc aggttagtgt ttattattaa 1020 tctcttttaa cctttctata cttgtttctc ctacatctcc taagtgctcc aactagacat 1080 gacagaagag atttaactaa cgtagtatga gttatataaa attctatttt tgtaagtcaa 1140 aaataatcaa atatcagaaa tttaataatg ttcaaactat atactctgtg tggggttacc 1200 gagacgatgt ggacattgtt cacgtctcat agggctgaaa gtcaatgagc aagtcctggg 1260 aactcattgt cttactgggg tcttgtccta aatttcatag gttcacccat tatgccctca 1320 gctttcctta attagccatg tctgcttacc tcttcctcca gtttctctct tatttttccc 1380 cagctatgtt gttatcattt ccagaaatct ctaaagcttg cacagatcct tagcactatg 1440 agatccattg aaagagatag tttttttctt tttgagatag ggcctggctc tgtcacccag 1500 gctgtagctc agtggtgcga tcgaggctca ctgcaacctc tgcctcccac gctcaagcaa 1560 tcctccctcc tcagcctcca gagtagctga gaatacaggc aggcaaccac gcccagctaa 1620 tttttgtaat tttggtagaa atgagatttt gccatgttgc ccaggctggt cttaaactgc 1680 tggactcaag caatcctcct gccttggcct cccaacatgc taggattata gatgtgagcc 1740 actgtgccca ggcaaaaaga gatgactctc aataaaaaaa gtcctttttc ttaaatcact 1800 gtttctttat ctgtgaattc ttcttccaac tagaaggagg agaaagaagt ttgcctgtat 1860 ttctcaccag gaggagaagg ggtctagtgt gacatcagaa tgaaagagtg ctggagtttg 1920 agccccttct tgctttccaa gatccccaca gtgatcagtt cccataccct ggtttattca 1980 tgtaaaccac acttattttt cttagcagct actgtgtact cggctccatt ctaggttcag 2040 atcattctat ttgattaaga cagagagggt cccgactctc atggaagtta cacaacaata 2100 gaggagacag acactaaccc aataagcatt taacaaagaa taaaatgtta gagagtcata 2160 gtgcactgaa gaaaagacat caggtttgtg aagaagagag acatggattc atctacttta 2220 gttcatatgt ttagggagct ctacctgaga aagtgacatt cagctgagac aacaaaataa 2280 gtagacagtc atgaagatct aatggacgaa agctccaggg agaccaaatg gggggaaagc 2340 cctggtgtgg gaaattatgt ggagagagag aaagaaggct agaggggctg atgtatagaa 2400 agtaaggaaa tggagaggca gaagatgagg taggacacag agagaaagtc aggagcctca 2460 tgattatagg ctctgatgtc cacggtaaaa aatttgaatt ttattttatt tatttattta 2520 tttattttat tttatttatt tatttatttt ttgagatgga gtctcgcttt gttgcccagg 2580 ctggagtgca gtggcgcgat ctcagctcac tgcaagctcc acctcctggg ttcatgccat 2640 tctcctgcct cagcctccct agtagctggg actacaggca cccgccacca cgcctggcta 2700 atttttagta tttttagtag tgagggcgtt tcgtcatgtt agccagggtg gtctccatct 2760 cctgacctcg tgatccacct gccccggcct cccaaagtgc tgagactaca ggtgtgagcc 2820 accacgcctg gcctattttt tttttttttt ttgagacgga gtttcgttct tgttgcccag 2880 gctggagtgc aatggtgcaa tctcggctca ctgcaacctt cgcctccctg gttcaagtga 2940 ttctcctgcc tcagcttccc aagtatctga gattacaggc acccaccacc atacctggct 3000 aatttttatt tttttgtatt tttagtagac atggggtatc accatgttga ccatgctggt 3060 ctcgaactcc tgacctcaga taatctgtct gccttggcct cccaaagtgc tgggattaca 3120 ggcatgagcc acggcggccg gactgaattt tatttaaata gatacgagaa gctactgtat 3180 ggttacaagg agagtcaatt tatattcaat ttatttttat tttattttat ttttttggtg 3240 atggggtctt gctctgttgc ccaggctaga ttgtagtggc acaatctcgg ctcactgcaa 3300 cctctgcctt ctgggttcag gcgattctcc tgactcagcc tacagagtag ctgggaccac 3360 aggtacatgc caccacacct ggctaagttt ttgtattttt tagtagagac aggatttcac 3420 cgtgttagcc aggatggtct cgatctcctg acctcgtgat ccacccacct tggcctccca 3480 aagtgcaggg attacaggcg tgagccactg cgcccggcct atattcaatt tttaaaacta 3540 attctagcta ctctgtgggg attggaatgt tggggttcac aagtggtcag gaagactatt 3600 taggagcaca gcagggaatt ctccagcgaa aacaggcttg tggcttcatg gagtgcatta 3660 gtgataaaga cggtgaaaaa gataaagtgg acagacttgg catgtatttt tgcttagctt 3720 gttaatgaat tactgtaaag ggggtagaac aatcaagctt attcctaagg attttgtttt 3780 gacaaataag tgggtggtag tgttgtttat tgagatagga aaaactatgg gaggaaatta 3840 tttgaagtgg gtggttggaa ataaaagttt tgtttaaatt tgagatgatt tattgacatt 3900 tatgtggagc aatcagaagg tcaatggcat ttaagagact catggtgagg ctagggcttc 3960 aagtatttat gttggcggca tcaatacatg tagtgtgtta aattccaggg agtggaagag 4020 gatacatagg gagatggatt gtgtggagaa aaaagaacag ggcacaggcc agcaaagggg 4080 gctgagaaag agcccaggga tgttggagaa aaatcaagag aacatgatgc gtgtacgtca 4140 aggaaaatag atttttttca aggagaaggg agaggccaat tgtggtgagt acctataaga 4200 ggagggggaa gtgagaacgt gacagagaag caagtgctgg gtttggtgga gttgatattt 4260 gcagtcagtg gagtatccag ggaggaaact ggattggaca atttgaagag cgagtagaag 4320 tgaggatgag gttaaggttg actgttttga gtagagagct tcagggaagg actgcactct 4380 gggttcaggg ggccagctgg atcaaaagga aaaggctaaa gaggctgaag agaagcagga 4440 ggacctgtga accagagatg ctcagtcatt attagcgagg aaatactaga gagcccctgt 4500 gtgcagtgat gactactcat gcagaaggtc acacagccaa tatttaacac agccagtatt 4560 tcacacagct aatatttatt agtgacatag aatataccag ttattactct aggtcatgag 4620 aatggagtga taaataaaat gaatccggtc gccatcagta tatgccatgt aacattttgc 4680 agtgactgtg taccaggcct gtgaatttca gtatgcaatt tcaataatga tcctgctgta 4740 tctgtggtgt ttaaaaacat atacatctct ggaatctaaa attgagaggt tataagtaaa 4800 acccagtatt acaaattgag tgctggaaat cagattgcag tttaaatctg agcatataga 4860 aagtcccttt cttctatgtc agcagatgcc ttttgtgtga ggtttagctg gactgcatta 4920 ttagacataa acaagtgttt ctgccctatg ttttcagaat gacaattctt tatgaaacta 4980 atagaagaac agaagacaac tgcaaaatca tgatggagat agtaattgct ttagaattaa 5040 ggaatacaaa aaataatgtg agctgtagtt atagggatca taaaagttta aatgggaatg 5100 tatttgagta tgtgatcagt gctaagaaga gtcatcattt aattttacac ttaacagtaa 5160 tctcgtgagg attacgctat tattaaatgc atttgataga ttacaaaaag gcttatggtt 5220 ggtaaaaatt gacccaagta gaagagatca tgtttttatt caggttttct gattctagag 5280 tttgagagtt tgtccatcat tagtgagtag tgactatatt gtgtctgaat tattgacaga 5340 atttctgata ttcatatgta ccaggttgtt tcttagagtg gggatagaga tgcaagggct 5400 gctagttccg atgtattggg gaaactttca ttcattttgc atttatcatt ttaaaagttc 5460 tgtatgtcta taatggtcat gtgttgaaga acacaaggaa gtattaaatc actccttctt 5520 ctaaggtttg actagcaagt tgggctagag ttaccaaata aaatacatgt tcctagtgaa 5580 atctgaattt cagatacaaa accataattt attgaaaatc caaatttaac tgggcatcct 5640 ctggttttat ttgccacatc tgtcaaccct aaatgtgaca catggacatg gattacagtg 5700 ctaaccatgc aagccacggt gacagcaact tcacacatgt ttatttttaa ctctctctgt 5760 aagaaagtgc ttagataatt tagggataaa aagatagaca ttgcttgatc cagggtgcac 5820 acctctctgc caccatttct aaagggcaaa gggagatttc cgcaggtctt gctcacagtc 5880 tggggagctg ctcatttttg taaagtgtct gtatgagaat gtcattttct tggtttcctc 5940 ctttacgagg ggacttgact acaaaaccaa gagttctgcc tctggccaag gctggtaatt 6000 tgatgcctgc tagtattgtt gggagtggga gactgaaaga aatgagttag ttggggcatt 6060 taacgggaat aaaatagctg tggttgtgat tcattactac agataattag tggaccagtg 6120 gcagagaaat taagaaaaaa gatgatgtga acgataaatg atatgattag tgactgcttg 6180 gtaaggcaag gaaatcatta aatcttggtt ctcatcaagt tcattttctg gaaagatagc 6240 actgtattgg gagcagaatt ctacaaaacc ttctttttac ataggaccaa gattttcaac 6300 aaatattttt caatgcaatt ctcagctgct ccataactaa tagtagcttg ttcaacacag 6360 attttttcag atgattcaca cctgtggtac ttacccaggg atggttcacc acccctccct 6420 tccctctcat catcgttggg gaacggtgac aatgtttgga acaatttttg gttgtcacaa 6480 acaggggttt cttctgatat tcaatgagta gaagccaggg acactgctag agaacccaca 6540 atgttcagaa cagcctctgc catcaacaag gaattatctg gtccaaaatg tcaatagtgc 6600 tgaggctaag agcactggtt cacactgtgc tctttctaaa aattctagac tcacatctgt 6660 tatacactca ccacacagtt tagtctttta tttttgcttg tttcattata aacaattaga 6720 cagttgcata aattcaacca ctttcttgtt gaatccattt agtcaatgca agctcaatat 6780 tttcatattt attttttgcc ttatgcaata tttttcaaca ttttcatgag ttgtcggtca 6840 tcactatctc tattaacttt caacaacttg cccttgtaag tcacaaatag tgatgctgct 6900 gaaattattt ctcactaaca tgcctcagat ttctgtagtg attctacatt tgatattatt 6960 cacaatgtaa aatgcttcta tttattcatt tcgcttttac ccaaggatta tttttaagtt 7020 attttgtcgt tttcacactt caaacataaa gacaaaaaca tcaaaaatat agtgttttac 7080 atatgtgcat attttcacac atatatgtat gtatatttat atgtattgaa actacagaag 7140 cacatgtcac caataagagc tctgagacac cttcgaccac ttacccttat cagatgagtt 7200 gtggaaacaa gtttttttaa ctgaatttct gagttttgtg gatttagaaa tgcaaaggaa 7260 ggtttgtgga cattcacagg gatcatgatt ttattctcct taaaactctt ctatactttc 7320 caattgtcct tagtataaat ccaaaatcct aacaccaccc aagaggcttt tcaatacctg 7380 gctcctgtga tttctccggg ctaatctttt accctccttc ccctcagcct ctctgcttta 7440 gtgaactttc tcctagtttt ttgaagaagt tcatcaattc aagcttttgt acatgggatt 7500 tcctaaacct gaaatgtgcc tcccgttttg tccaaacaga cacgggctcc actctgcccc 7560 ctggctcaca cctgcttaac ctgtcaagtc acatctgaac cgtcactatt aagagggtcc 7620 ttctctggca ccctaatgta attgagatca tcctattatt ctctgttcta gaactccaca 7680 cttccgacat ttctcattcc tgtctaagct cttgtgtgtt tggtgttggg ccatcacttt 7740 cactgctctt taagctcccc cagcggagtg gagaggtctg ttttccctcg tttggattcc 7800 tagaggcagc gcagaccagg cacaaggtca gcactaagga agggttcaca ggatgaacgc 7860 ggtgggtgct gtttaaggaa ccggtaaacg tgtgggatga gagaaggagc agagagtgtc 7920 tttggggtgg aggctcccag gaggaggcgg cgcgggctgc ggtgcggggc ggatcctcct 7980 ccagctcctg cttggaggtc tccagaacag gctggaggta gggagggggg tcccaaaagc 8040 ctggggatca gacgtggttt tcccgcctgg tccctcaggc cccctttcgc ctcaggaaga 8100 cagaggagga gcccctgggc tgcagatggt gggcgttgcg gcgggggccg gttaaggttc 8160 ccagtgcctg caccccgccc agggagcccc ggatggtggc gtcactgtca gtgtcttctc 8220 aggaggccgc ctgtgtgact ggatcgttcg tgtccccaca gcacgtttct tggagtactc 8280 tacgtctgag tgtcatttct tcaatgggac ggagcgggtg cggttcctgg acagatactt 8340 ccataaccag gaggagttcg tgcgcttcga cagcgacgtg ggggagtacc gggcggtgac 8400 ggagctgggg cggcctgatg ccgagtactg gaacagccag aaggacctcc tggagcggag 8460 gcgggccgag gtggacacct attgcagaca caactacggg gttggtgaga gcttcacagt 8520 gcagcggcga ggtgagcgcg gcgcggggcg gggcctgagt ccctgtgagc tgggaatctg 8580 agtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg agagagagag 8640 agagagagag acagagagag agagagcgcc atctgtgagc atttagaatc ctctctatcc 8700 tgagcaagga gttctgaggg cacaggtgtg tgtgtagagt gtggatttgt ctgtgtctgt 8760 gaggctgttg tgggagggga ggcaggaggg ggctgcttct tattcttgga ggactctgtg 8820 gggaggtgac aagggaggtg ggtgcgggcg gctggagaga gaggtgacct tgattgtcct 8880 gggtccttag agatgcaggg aagggaaatg taaggggtgt gtggttgggg tgaaggttta 8940 ggggaggaga gctgaggggt aaggaaggtt tgggataatg tgaggaggcc ggttccagac 9000 tgtccctggc acacaccctt catgtaatct ctgaaataaa agtgtgtgct gtttgtttgt 9060 aaaagcatta gattaatttc taggggaatt gaggagacct ctgaggcatc tctgaagctt 9120 ctttaggtct aaatttcttg ctagtttttt gttttttatt gtgtatattt ttacatagta 9180 gaaatgactg tgaaactaac tttttgaatt aaagttttaa cacagttact attttattat 9240 aatgctaata gttttctagt agttacatat tattctttta tatataatag ttgtgacaca 9300 acttacctca ctttcccctt tgttgacctt tattatgaca ttcaccaaaa gttgaaaatg 9360 tatgtttctg gttaattttt aatttatatt tttttcattt ataattcttt tgaattattt 9420 tgacctattt attggccagt tttaataact gctgtaagaa ttccctattg tatttggtag 9480 ggaatggaca atgatctact gcctaatatc tcgagggctt agtatttttc tcagtgactt 9540 tgtgggttct ttgtactgtg agattattaa cactttattg atatttgatt cagcatttgc 9600 tccagtttgt ggtttgtatg ttgattttga aaattctttt ccatgttaag aatttgaaca 9660 tttttatata ataaaatatg ttgcaaaatt tttattaatg atttacaatc catcttaaat 9720 ctgccatttt gtggtattgt tgtctccagg tttctcctta cttctaaaaa aaattgcatt 9780 tattgagagt ctgctagtgt tagggatttt cctgggcata agcaccccaa gtgacgagtc 9840 ccagacactg ccttaatcca aatgtgattc tggaaagaaa aatcatttta caatgatagg 9900 cctaataata attaagcttg tgttgcatgg gagatgcatt gatcagctaa atgtaaatat 9960 aagaactttc aaaactaaaa tgacgttcct taatccttct ctctgcttta tgaatcatgc 10020 ttttctggga aagtaaaaat ttggagaatc atttctgtct gtcccacctt cccaggggca 10080 gaaccatttc tgtagtgttc taaggtgtga gtgcatggca gtagtattcc taaaaattca 10140 tattcggttt cgtcatgtac ccaactctgt cccgttatct atccacattg ttttaaatca 10200 tatatttctg tcaaggtgta caaggatgat aaataggtgc caagtggagc acccaagtgt 10260 gatgagcccc ctcacagtgg aatggagtgt gaagctttat gacctcataa attgaaggtt 10320 atcttcagtc attgttttat atattttaca tgcattaatc ctcatataat cccaagaggt 10380 aaattagtat aattatcctt cattataggt gacaaagttg agacacagaa gaatcaaact 10440 cttaaggcag accttggatt tgaaccaggc aacctggctc agatatccgt tttaattact 10500 acactctgta ctttcaaaga tttgtaaaca ctttgacaat gcatgacaat ttcaagctat 10560 gaagaaacaa acacaatttt tcacaatatc tctcaaatct aatgggtcct cactatcaag 10620 attaagttcc aggctgatga cactgtaagg ccacatggcc agctgtgctg gaggcctggt 10680 caaggtcaga gcctgggttt gcagagaagc agacaaacag ccaaacaagg agacttactc 10740 tgtcttcatg actcattccc tctacctttt ttctcctagt ccatcctaag gtgactgtgt 10800 atccttcaaa gacccagccc ctgcagcacc acaacctgct ggtctgttct gtgagtggtt 10860 tctatccagg cagcattgaa gtcaggtggt tccggaatgg ccaggaagag aagactgggg 10920 tggtgtccac aggcctgatc cacaatggag actggacctt ccagaccctg gtgatgctgg 10980 aaacagttcc tcggagtgga gaggtttaca cctgccaagt ggagcaccca agcgtgacaa 11040 gccctctcac agtggaatgg agtgagcagc tttctgactt cataaatttc tcacccacca 11100 agaaggggac tgtgctcatc cctgagtgtc aggtttctcc tctccgacat cctattttca 11160 tttgctccat gttctcatct ccatcagcac aggtcactgg gggtagccct gtaggtgttt 11220 ctagaaacac ctgtacctcc tggagaagca gtctcgcctg ccaggcagga gaggctgtcc 11280 ctcttttgaa cctccccatg atgtcacagg tcagggtcac ccaccctccc cgggctccag 11340 gcactgcctc tgggtctgag actgagtttc tggtgctgtt gatctgagtt atttgttgtg 11400 atctgggaag aggagaagtg taggggcctt cctgacatga ggggagtcca atctcagctc 11460 tgccttttat tagctctgtc actctagaca aactacttag cctcattgag tctcaggctt 11520 tctgtggatc agatgttgaa ctcttgcctt acatcaaggc tgtaatattt gaatgagttt 11580 gatgtctgaa ccttgtaact gttcagtgtg atttgaaatc ctttttttct ccagaaatgg 11640 ctagttattt tagttcttgt ggggcagact tcttccccat tttcaaagct ctgaatctta 11700 gagtctcaat taaagaggtt caatttggaa taagcatcac taaacctggc ttcctctctc 11760 aggagcacgg tctgaatctg cacagagcaa gatgctgagt ggagtcgggg gctttgtgct 11820 gggcctgctc ttccttgggg ccgggctgtt catctacttc aggaatcaga aaggtgagga 11880 gcctttggta gctggctctc tccataggct tttctggagg aggaactatg gctttgctga 11940 ggttagttct cagtatatga gtggccctga ataaagcctt tctttcccca aacggctcta 12000 atgtcctgct aatccagaaa tcatcagtgc atggttacta tgtgaaagca taatagcttg 12060 tggcctgcag agacaagagg aaggttaaca agtaggggtc ctttggtttg agatcttgga 12120 gcagattaag gaagagccac taagactaat ggaattacac tggatcctgt gacagacact 12180 tcacccttca tgggtcacat ggtctgtttc tgctcctctc tgccctggct ggtgtgggtt 12240 gtagtgacag agaactctcc ggtgggagat ctggggctgg gacattgtgt tggaagacag 12300 atttgcttcc ataaatttta agtgtatata ttttcctctt tttcccagga cactctggac 12360 ttcagccaag aggtaatacc ttttaatcct cttttagaaa cagatacggt ttccctagtg 12420 agaggtgaag ccagctggac ttctgggtcg ggtagggact tgcagaactt ttctgtctta 12480 ggagaggttt ctaaatgcac caatcagtgc tctgtaaaaa cacacccatt ggcactctgt 12540 ggctagatag atgtttgtaa aatggactaa tcagcactct gtaaaatgga gcaatccaca 12600 ctctgtaaaa tgggccaatc aatgctcttt aaaatggacc aatcagcagg acatgggcgg 12660 ggacaaataa gggaatacaa gctggccacc ccagccagca gcagcaaccc gctcaggtcg 12720 ccttccatgc tgtggaagct ttgttctttt gctcttcaca ataaatcttg ctgttgctca 12780 ctcttcgggt ctgtgccacc tttaagagct gtaacactca ctgtgaagat tcgcggcttc 12840 attcttgaag tcagcaaaac cacgaaccca ccggaaggaa caaactctgg acacactaga 12900 attgatggta gaggtgataa ggcatgagac agaaataata ggaaagactt tggatccaaa 12960 tttctgatca ggcaatttac accaaaactc ctcctctcca cttagaaaag gcctgtgctc 13020 tgtgggacta ttggctctgg gagactcagg aacttgtttt tcttcttcct gcagtgctct 13080 catctgagtc cctgaaagag aggaaaagaa actgttagta gagtcaggtt gaaaacaaca 13140 ctctcctctg tcttttgca 13159 // ID KX687263; SV 1; linear; genomic DNA; STD; HUM; 10826 BP. XX AC KX687263; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH18 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*15_02_02e1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-10826 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-10826 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; b1ba1dde6bff59cc6fe187ae1e15abf2. DR IMGT/HLA; HLA-DRB1*15:02:02; HLA00868. XX FH Key Location/Qualifiers FH FT source 1..10826 FT /organism="Homo sapiens" FT /isolate="IH18" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <173..>9679 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*15_02_02e1" FT mRNA join(<173..272,5540..5809,8088..8369,9070..9180, FT 9656..>9679) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*15_02_02e1" FT /product="MHC class II antigen" FT CDS join(173..272,5540..5809,8088..8369,9070..9180,9656..>9679) FT /codon_start=1 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*15_02_02e1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1B6" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1B6" FT /protein_id="AST15777.1" FT /translation="MVCLKLPGGSCMTALTVTLMVLSSPLALSGDTRPRFLWQPKRECH FT FFNGTERVRFLDRYFYNQEESVRFDSDVGEFRAVTELGRPDAEYWNSQKDILEQARAAV FT DTYCRHNYGVGESFTVQRRVQPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFLN FT GQEEKAGMVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRARSE FT SAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPT" XX SQ Sequence 10826 BP; 2829 A; 2167 C; 2626 G; 3204 T; 0 other; gctattgaac tcagatgctg attggttctc caacacgaga ttacccaacc caggagcaag 60 gaaatcagta acttcctccc tataacttgg aatgtgggtg gaggggttca tagttctccc 120 tgagtgagac ttgcctgctt ctctggcccc tggtcctgtc ctgttctcca gcatggtgtg 180 tctgaagctc cctggaggct cctgcatgac agcgctgaca gtgacactga tggtgctgag 240 ctccccactg gctttgtctg gggacacccg acgtaagtgc acattgcggg tgctgagcta 300 ctatggggtg gggaaaatag ggagttttgt taacattgtg cccaggccat gtcccttaag 360 aaattgtgac gttttcttca gagattgccc atctttatca ttggatccca aattatttcc 420 tccataaaag gagcttgggt acttgccctc ttcatgagac ttgtgtaagg ggcctttgca 480 caagtcattt cttttcaaat ctccaccaat aaaacctttg catcacatgt cctcagggtc 540 tttagaggat ttagaaataa ggattctaaa ataaattccc catacagcac ttccctttat 600 tatgttgact tatgtcagac aaaaggaggt tcttactgaa aattttgtgg gagtcaaggg 660 aattcaaagg gtctctccta gacgatccag tgttaggttc cccacaggac ctttggtgtt 720 ggccatagtc ctcatatgtg aggatggacc cagtggcctc cccattatct cctttctttt 780 cttgctgaac tccaatgttt ataaggcctg tatccctgta gtgtatgtag gttctctgac 840 agaagttata cttagtgctc ttcctttctt gtggggaaaa gtccctggaa ctgaagctga 900 gattgttaat acttggagtc accttacaga tacagagcat ttatgaggta ttctttggtg 960 cctaaagaac ttaaggcatc ctctgaaaaa ctagcccagg ttcgtgttca ttatgaatct 1020 tttttaacct ttctgtactt gtttctcttg catctcctat gtgctctaac tagacatgac 1080 agaagagatt taactaatgt ataaattata tgaaattcta ttttttaagt caaaaataat 1140 caactatcag aaatttaata atgttcaaac tatatactct gtgtggggtt accgagatga 1200 tgtgaacatt gttcacgtct catagggctg aaagtcaatg ggcaagtctt gggaactcat 1260 tgtcttactg gggtcttgtc ctaaatttcc taggttcacc catcatgccc tcagctttcc 1320 ttaactagcc atgtctgctt acctcttcct ccagtttcta tttttcccca gctatgttgt 1380 catcatttcc agaaatctct aaagcttgca cagaacctta gcactatgag attcattgaa 1440 agagactttt tttctctttt tgaggtaggg cctggctctg tcacccagtc tatagctcag 1500 tggtgtgatc gaggctcact gcaacctctg ccacccatgc tcaagtgatc ctccctcctc 1560 aggctccaga gtagctggga atacaggcag gcaaccacgc ccagctaatt tttgtaattt 1620 tggtagacat gagattttgc catgttgccc aggctggtct tgaactgctg gactcaagca 1680 atcctcctgc cttggcctcc caacatgcta ggattataga tgtgagccac tgtgcccagg 1740 caaaagagat gactcttaat aaaaaaattt cctttttctt aaatcactgt ttctttatct 1800 gtgaattctt cttccaacta gaaggaggag aaaaaagaag tttgcctgta tttatcactg 1860 ggaggagaag gggtctagtg tgacattaaa atgaaagagt gctggagctt gagccccttc 1920 ttgctttcca ggatccctac agtgatcagt tcccataccc tggtttattc atgtaaacca 1980 cacttatttt tctcagcagc tactctttac tgggctccat tctaggttca aatcattcta 2040 tttgattaag ttagagagcg tccctactct catggaagtt acacaagagt agaggagaca 2100 gacactaacc caataagcat ttaacaaaga agataatgtt agagagtcat agtgcactga 2160 agaaaagaca tcaggtttgt gaaaaagaga gacatggatt cacctacttt agttcatatg 2220 ttagggagct ccacctgaga aagtgacatt cagctgagac aacaaaataa gtagacagtc 2280 gtgaagatct aagggatgaa agttccaggg agaccgaatc gggggaaagc cctgatgtgt 2340 taaattatgt ggagggagag aaagaaagct agaggggctg atgtatagaa agcaaggaaa 2400 tggagaggca gaagatgagg gtaggacaca gagaggaatt caggagcctc atcattatag 2460 gctctgatgt ccacagtaaa aaaaaattaa attttattat ttatttattt gtttgtttat 2520 tttattttat tttgtgatgg agtctctctc tgttgcccag gctagattgc tgtggcacaa 2580 tctcggctca ctgcaacctc cgcctcctgg gttcaagcga ttctcctgcc tcagcctccc 2640 gattagctgg ggccacaggc gcatgccacc acacctggct aattttttgt atttttagta 2700 gggatagggt ttcaccgtgt tagccaggat ggtctcgatc tcctgacctc gtgatccgcc 2760 cgccttggcc tcccaaagtg ctgggattac aggcgtgagc cactgcgccc ggcctatatt 2820 caatgtttaa aactaattct agctactctg tggggattgg attgttgggg ttcactagtg 2880 gttaggaaga ctatttagga gcacagcagg gaattcttca gggaaaacag gtttgtggct 2940 tcatggagtg cattagtgat aaagatggtg aaaaagataa agtggacaga cttggcatgt 3000 atttttgctt agcttgttaa tgaattactg taaagggggt agaacaatca agcttattcc 3060 taaggatttt cttttgacaa ataaatgggt ggtagtgttg tttattgaga taggaaaaac 3120 tatgggagga aatgatttga agtgggtggt ttgaaataaa agttttgttt aaatatgaga 3180 tgattgattg acatttatgt ggagaaatcc gaaggtcaat ggcatttaag agactcatgg 3240 tgaggccagg gcttcaggta tttatgttgg cagcagcaat acgtgtagtg tgttaaattc 3300 cagggcgtgg aagaggatac atagggagat ggattgtgtg aagaaaaaag aacagggcac 3360 aggccagcaa agggggctga gaaagagccc aaggatgctg gagaaaaacc aagagaacat 3420 catgtgtgta agtccaggaa aatagattat tttcaaggag aagggagagg ccaattgtgg 3480 tgagtaccac taagaggagg ggcaagtgag aatatgatag agaagcaagt gctgggtttg 3540 gtggagtcga tatttgcagt caatggagca tccaggtagg aaactggatt ggaccatttg 3600 aagagtgagt aaaagtgagg acgaggttaa ggttgactgt tttgagtaga gagcttcagg 3660 gaaggattgt tctctgggtt cagggagcca gctgaaccta aaggaaaagg ctaaagaagc 3720 tgaagagaag gaggaggacc tgtgaaccag agatgctcag tcattattag cgaggaaata 3780 cggagagccc ctgtgtgcag tggtgactac tcatgcaaaa tgtcacacag ccaatattta 3840 acacagccag tatttcacac agccaatatt tattagtgac atagcatata ccagttatta 3900 ctctaggtca tgagaatgga gtgataaata aaatgaatcc agtcgccatc actatatgcc 3960 atgtaacatt ttgcaatgac tgtgtatcag gcctatgaat ttcagtattc aatttcaata 4020 atgatcctgt tgtatctgtg gtatttaaaa acatatacat ctctggaatc taaaattgag 4080 aggttataag taacacccag tattacaaat ttagtgctgg aaatcagatt gcagtttaaa 4140 tctgagcata tagaaagtcc gtttcttcta tgtcagcaga tgctttttgt gtgaggttta 4200 ggtatactgc attatttgac ataaaccagt gtttctgccc tatgtcttca gaatgacaat 4260 tctttatgaa actaatagaa gaacagaaga caattgcaaa atcatgatga agatactaat 4320 tgctttagaa ttaaggaata caaaaaataa tatgagctgc agttatagga tcagaaaagt 4380 taaaatggga atgtattcga gtgtttatta tgtgatcagt gctaagaagt gtcatcattt 4440 aattttacac ttaacggtaa tcctgtgagg attacgctat tattaaatgc atttgataga 4500 ttacaaaaag gcttatggtt ggtaaaaatt gacccaagta gaagagatcg tgtttttatt 4560 caggttttct gattatagag tttgagagtt tgaccatcat tagtgagtag tgactatatt 4620 gtgtctgaat tattgacaca atttctgata ttcatatgta ccaggctgtt tcttagagtg 4680 gggacagaaa tgcaagggct gctagttctg atgtatagga gaaactttca ttcattttgc 4740 atttatcatt ttaaacgttg tatatgtcta tctgggcatg tgttcaagaa cacaaggaag 4800 tattaaatca ctccttcttc tgaggtttga ctagcaagtt gggctagagt tacaaataaa 4860 atacaggttc ctagtgaaat ctgaatttca gatacacaac cataatttat tggaaatcca 4920 aatttaactg ggaatcttct attattctct gctctagaac gccacacttc tgatatttct 4980 cattgctgtc taagctcttg tgtgtttggt ttttggccat cgctttcact gctctttaag 5040 ctcccccaga ggagtggaga ggtctgtttt ccctcgtttg gattcctaga ggcagcgcag 5100 gcctggcaca aggtcatcac taaggaagtg ttcacagggt gaacgcggtg ggtgctgttg 5160 aaggtaccgg taaagcgtgt gggatgagag aaggagcaga gagtgtcttt ggggctccca 5220 ggaggaggcg gcgcgggctg cggtgctggg cggatcctcc tccagctcct gcttggaggt 5280 ctccagaaca ggctggaggc agggaggggg tcccaaaagc ctggggatga gaaggggttt 5340 tcccgcatgg tcccccaggc ccccgttcgc ctcaggaaga cggaggatga gctcctgggc 5400 tgcaggtggt gggcgttgcg ggtggggccg gttaaggttc cagcgcccgc accccgctca 5460 gggagccccg gatggtggcg tcgctgtccg tgtcttctca ggaggccgcc ctgtgaccgg 5520 atggttcgtg tccccacagc acgtttcctg tggcagccta agagggagtg tcatttcttc 5580 aatgggacgg agcgggtgcg gttcctggac agatacttct ataaccagga ggagtccgtg 5640 cgcttcgaca gcgacgtggg ggagttccgg gcggtgacgg agctggggcg gcctgatgcc 5700 gagtactgga acagccagaa ggacatcctg gagcaggcgc gggccgcggt ggacacctac 5760 tgcagacaca actacggggt tggtgagagc ttcacagtgc agcggcgagg tgagcatggc 5820 cgcgggcggg gcctgagtcc ccgtgagctg ggaatctgag tgtgtgtgtg tgtgtgtgtg 5880 tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgagagag agagagagag agagagagag 5940 agagagagag agcgccatct gtgagcattt agaatcctct cagtccggag caagcagttc 6000 tgagagcaca ggtgtgtgtg taaagtgtgg atttgtctgt gtctgtgtgt ctgttgtggg 6060 aggggaggca ggagggggct gtttcttatc cttggagacc tctgtgggga ggtgacaagg 6120 gaggtgggtg ctgggggctg gagagagagg agaccttgat tatctcggtc cttagagatg 6180 cagggaaggg aaatgtaagg tgtgtgtggt tggggtgaag gtttagggga ggactgctga 6240 ggggtaaggc aggtttggga taatgtgagg aggccagttc cagactctcc ctggcataca 6300 cccttcgtgt aatctctgaa ttaaaagtgt gtgctgtttg tttgtaaaag caatagatta 6360 atttctagag gaactgagta gacctctgag gcacctctga agcttcttta gatctaaatt 6420 tcttcctagt tttttgtttt tttcagtgtg tatattttta catagtagaa atgactgtga 6480 aactaacttt ttgaattaaa gttttgacac ggttactatt ttattataat gctggtagtt 6540 ttctagtagt tacatattat tcttttatat ataatatttg tgacacaact cacctcactt 6600 tcccgtttgt tgacctttat tatgacattc accagaagtt gaaattgtgt gtttctggtt 6660 aatttttaat ttatattttt tatttgtaat tcctttgaat tattttgccc tatttattgg 6720 ccgattataa ttattgctct aagaattccc tattgtattt ggtaggtaat ggacaatgat 6780 ctacggtcta atatcttgag ggcttagtat ttttctcagt gactttctgc gttctttgta 6840 ctataagatt attaacactt tattgatatt tgatccagca tttgctccag tttgtggttt 6900 gtatgtggat tttgaaaatt cttttccatg ttaagaattt gaacattttt atttaataaa 6960 atatattgca acatttttat taatgatcta caatccatct gaaatctgcc attttgtggc 7020 attgttgtct ccaggtttct ccttacttct aaaaaaatag ttgtatttat tgagagtatg 7080 ctagtgtcgg ggattttcct gggcataagc accccaagta acgagtccca gacactgcct 7140 taatccaaat gtgattctgg aaagaaaaat cattttacaa tgataggcct aataataatt 7200 atgcttgtgt tgcacgggag atgcattgat cagctaaatg taaatataag aactttcaaa 7260 acttaaatga cgttccctaa tccttctctc tgcttcagga ctcatgcttt tctaggaaag 7320 taaaaatttg gagaatcatt tctgtctgtc ccaccttccc aggggcagaa caatttctgt 7380 tgtgttctaa ggtgtgagtg catgggagta gtattcctaa aattcatact tggtttcctc 7440 atgtacccaa ctctgtccct ttatctatgc atattgcttt aaatcatatt tttctgtcaa 7500 ggtgtacaag gatgataaat aggtgccaag tggagcactc aagtgtgatg agtgccctca 7560 cagtggaatg gagtgagaag ctttctgacc tcataaactg aaggctatct tcagtcattg 7620 ttttatatat tttacgtgca ttaatcctca tataacccca agaggtaaat tagtataatt 7680 atccttcatt gtaggtgaca aagttgagac acagaagaat caaaaaactc ttccaggatc 7740 aaccagtaaa aggcagacct tggattcgaa ccaggcaacc tggctcaaat atcagtttta 7800 attactacac tctgtacttt ccaagatttg taaacagttt gacaatgcat gccgatttaa 7860 aactatgaag aaacaaacac aatttttcac aacacctctc aaatctaatg ggtcctcact 7920 gtcaagatta aattccaggc tgatgacact gtaaggtcac atggccagct gtgctatagg 7980 cctggtcaag gccagagcct gggtttgcag agaagcagac acacagccaa accaggagac 8040 ttactctgtc ttcctgactc attccctcta cgttgttttt ctcctagtcc aacctaaggt 8100 gactgtatat ccttcaaaga cccagcccct gcagcaccac aacctcctgg tctgctctgt 8160 gagtggtttc tatccaggca gcattgaagt caggtggttc ctgaacggcc aggaagagaa 8220 ggctgggatg gtgtccacag gcctgatcca gaatggagac tggaccttcc agaccctggt 8280 gatgctggaa acagttcctc gaagtggaga ggtttacacc tgccaagtgg agcacccaag 8340 cgtgacaagc cctctcacag tggaatggag tgagcagctt tctgacttcc taaatttctc 8400 acccactaag aaagggaccg tgctaatccc tgagtgtcag gttcctcctc tcccacatcc 8460 tattttaatt tgctccatgt tctcatctcc atcagcacag gtcactgggg gtagccctgt 8520 aggtgtttct agaaacacct gtacctcctg gagaagcagt ctcgcctgcc aggcgggaga 8580 gactgtccct cttttgaacc tccccatgat tttgcaggtc agggtcaccc actctcccag 8640 gctccaggcc ctgcctctgg gtctgagact gagtttctgg tgctgttgct ctgagttatt 8700 ttttgtgatc tgggaagagg agaagtgtag gggcctacct gacatgaggg gagtccaatc 8760 tcagccctgc ttttcattag ctttgtcact ctagacaaac tacttatcct cattgagtct 8820 caggctttct gtggatcaga tgttgaactt gtgccttaca tcaaggctgt aatatttgaa 8880 tgagtttgat gtctgaacgt cgtaactgtt cagtgtaatt tgaaatcctt tttttctcct 8940 gaaatggcta gttattttag ttcttgtgag gcagctttct gccccatttt caaagctcta 9000 aatcttagag tctcaagtaa aaaggttcaa tttggaataa acatcactaa acctggcttc 9060 ctctctcagg agcacggtct gaatctgcac agagcaagat gctgagtgga gtcgggggct 9120 ttgtgctggg cctgctcttc cttggggccg ggctgttcat ctacttcagg aatcagaaag 9180 gtgaggagcc tttgggagct ggctctctcc ataggctttt ctggaggagg aactatggct 9240 ttgctgaggt tagttctcag tatatgagtg gccctgaata aagcctttct ttccccaaac 9300 ggctctaatg tcctgctaat ccagaaatca tcagtgcatg gttactatgt gaaagcataa 9360 tagcttgtgg cctgcagaga cgagaggaag gttaacaagt aggggtcctt tggtttgaga 9420 tcctggagca aattaaggaa gagccactaa ggctaatgga attacactgg atcctgtgac 9480 agacacttca ggcttcatgg gtcacatggt ctgtttctgc tcctttctgc cctggttggt 9540 gtgggttgtg gtgttagaga aatctcaggt gggagatctg gggctgggac attgtgttgg 9600 aggacagatt tgcttcaata acttttaagt gtatatcttt tcctcttttt cccaggacac 9660 tctggacttc agccaacagg taataccttt taatcctctt ttagaaacag acacagtttc 9720 cctagtgaga ggtgaagcca gctggacttc tgggtggggt ggggacttgg agaacttttc 9780 ttacaagagg tttttttttt tttttttttt tttttttttt ttttttcttt gagacggagt 9840 ctcgctctgt cgcccaggct ggagtgcagt ggcgggatct cggctcactg caagctccgc 9900 ctcccgggtt cacgccattc tcctgcctca gcctcccaag tagctgggac tacaggcgcc 9960 cgccactacg cccggctaat tttttgtatt tttagtagag acggggtttc accgttttag 10020 ccaggatggt ctcgatctcc tgacctcgtg atccgcccgc ctcggcctcc caaagtgctg 10080 ggattacagg cgtgagccac cgcgcccggc ctacaagagg tttctaaatg caccaatcag 10140 tgctttgtaa aaacacacca ataggttctc tgtggctagc tggatgtttg taaaatggac 10200 caattcgcac tctgtaaaat agaccaatca gcactcttta aaatggacca atcagcactt 10260 ttaaaatggg ccaatcacca ctctttaaaa tggaccaatc agcactcttt aaaatggacc 10320 aatctgcagg acatgggcag ggacaaatac aggaataaaa gctggccacc ccaaccagca 10380 gtggcaaccc actcaggtcc tcttccctgc tgtggaagtt ttgttctttt gatcttcaca 10440 ataaatcttg ctgctgccca ctctttggat ccctgccgcc tttaagagct gtaacactca 10500 ctgtgaaggt ctgcaggaag tcagcgagac cacaaaccca ccggaaggaa caaactcagg 10560 acacaccaga atgatggtag aggtgataag gcatgagaca gaaataatag gaaagacttt 10620 ggatccaaat ttctgatcag gcaatttaca ccaaaattcc tcctctccac ttagaaaagg 10680 tgtgctctgc gggactattg gctcagggga gactcaggaa cttctttttc ttcttcctgc 10740 agtgctctca tctgagccct tgaaagaggg gaaaagaaac tgttagtaga gccaggttga 10800 aaacaacact ctcctctgtc ttttgc 10826 // ID KX687264; SV 1; linear; genomic DNA; STD; HUM; 9673 BP. XX AC KX687264; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH31 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*16_01_01e1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-9673 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-9673 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; e09b0b3e47cf9a793b1f92cc8b268c28. DR IMGT/HLA; HLA-DRB1*16:01:01; HLA00876. XX FH Key Location/Qualifiers FH FT source 1..9673 FT /organism="Homo sapiens" FT /isolate="IH31" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <173..>9652 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*16_01_01e1" FT mRNA join(<173..272,5537..5806,8061..8342,9043..9153, FT 9629..>9652) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*16_01_01e1" FT /product="MHC class II antigen" FT CDS join(173..272,5537..5806,8061..8342,9043..9153,9629..>9652) FT /codon_start=1 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*16_01_01e1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G194" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G194" FT /protein_id="AST15778.1" FT /translation="MVCLKLPGGSCMTALTVTLMVLSSPLALAGDTRPRFLWQPKRECH FT FFNGTERVRFLDRYFYNQEESVRFDSDVGEYRAVTELGRPDAEYWNSQKDFLEDRRAAV FT DTYCRHNYGVGESFTVQRRVQPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFLN FT GQEEKAGMVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRARSE FT SAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPT" XX SQ Sequence 9673 BP; 2542 A; 1881 C; 2359 G; 2891 T; 0 other; gctattgaac tcagatgctg attggttctc caacacgaga ttacccaacc caggagcaag 60 gaaatcagta acttcctccc tataacttgg aatgtgggtg gaggggttca tagttctccc 120 tgagtgagac ttgcctgctt ctctggcccc tggtcctgtc ctgttctcca gcatggtgtg 180 tctgaagctc cctggaggct cctgcatgac agcgctgaca gtgacactga tggtgctgag 240 ctccccactg gctttggctg gggacacccg acgtaagtgc acattgcggg tgctgagcta 300 ctatggggtg gggaaaatag ggagttttgt taacattgtg cccaggccat gtcccttaag 360 aaattgtgac gttttcttca gagattgccc atctttatca ttggatccca aattatttcc 420 tccataaaag gagcttgggt acttgccctc ttcatgagac ttgtgtaagg ggcctttgca 480 caagtcattt cttttcaaat ctccaccaat aaaacctttg cctcacatgt cctcagggtc 540 tttagaggat ttagaaataa ggattctaaa ataaattccc catacagcac ttccctttat 600 tatgttgact tatgtcagac aaaaggaggt tcttactgaa aattttgtgg gagtcaaggg 660 aattcaaagg gtctctccta gacgatccag tgttaggttc cccacaggac ctttggtgtt 720 ggccatagtc ctcatatgtg aggatggacc cagtggcctc cccattatct cctttctttt 780 cttgctgaac tccaatgttt ataaggcctg tatccctgta gcgtatgtag gttctctgac 840 agaagttata cttagtgctc ttcctttctt gtggggaaaa gtccctggaa ctgaagctga 900 gattgttagt acttggagtc accttacaga tacagagcat ttatgaggta ttctttggtg 960 cctaaagaac ttaaggcatc ctctgaaaaa ctagcccagg ttcgtgttca ttatgaatct 1020 tttttaacct ttctgtactt gtttctcttg catctcctat gtgctctaac tagacatgac 1080 agaagagatt taactaatgt ataaattata tgaaattcta ttttttaagt caaaaataat 1140 caactatcag aaatttaata atgttcaaac tatatactct gtgtggggtt accgagatga 1200 tgtgaacatt gttcacgtct catagggctg aaagtcaatg ggcaagtctt gggaactcat 1260 tgtcttactg gggtcttgtc ctaaatttcc taggttcacc catcatgccc tcagctttcc 1320 ttaactagcc atgtctgctt acctcttcct ccagtttcta tttttcccca gctatgttgt 1380 catcatttcc agaaatctct aaagcttgca cagaacctta gcactatgag attcattgaa 1440 agagactttt tttctctttt tgaggtaggg cctggctctg tcacccagtc tatagctcag 1500 tggtgtgatc gaggctcact gcaacctctg ccacccatgc tcaagtgatc ctccctcctc 1560 aggctccaga gtagctggga atacaggcag gcaaccacgc ccagctaatt tttgtaattt 1620 tggtagacat gagattttgc catgttgccc aggctggtct taaactgctg gcttcaagca 1680 atcctcctgc cttggcctcc caacatgcta ggattataga tgtgagccac tgtgcccagg 1740 caaaagagat gactcttaat aaaaaaattt cctttttctt aaatcactgt ttctttatct 1800 gtgaattctt cttccaacta gaaggaggag aaaaaagaag tttgcctgta tttatcactg 1860 ggaggagaag gggtctagtg tgacattaaa atgaaagagt gctggagctt gagccccttc 1920 ttgctttcca ggatccctac agtgatcagt tcccataccc tggtttattc atgtaaacca 1980 cacttatttt tctcagcagc tactctttac tgggctccat tctaggttca aatcattcta 2040 tttgattaag ttagagagcg tccctactct catggaagtt acacaagagt agaggagaca 2100 gacactaacc caataagcat ttaacaaaga agataatgtt agagagtcat agtgcactga 2160 agaaaagaca tcaggtttgt gaaaaagaga gacatggatt cacctacttt agttcatatg 2220 ttagggagct ccacctgaga aagtgacatt cagctgagac aacaaaataa gtagacagtc 2280 gtgaagatct aagggatgaa agttccaggg agaccgaatc gggggaaagc cctgatgtgt 2340 taaattatgt ggagggagag aaagaaagct agaggggctg atgtatagaa agcaaggaaa 2400 tggagaggca gaagatgagg gtaggacaca gagaggaatt caggagcctc atcattatag 2460 gctctgatgt ccacagtaaa aaaaaattaa atttttatta tttatttatt tgtttatttt 2520 attttatttt gtgatggagt ctctctgtgt tgcccagggt agattgctgt ggcacaatct 2580 cggctcactg caacctccgc ctcctgggtt caagcgattc tcctgcctca gcctcccgat 2640 tagctggggc cacaggcgca tgccaccaca cctggctaat tttttgtatt tttagtaggg 2700 atagggtttc accgtgttag ccaggatggt ctcgatctcc tgacctcgtg atccgcccgc 2760 cttggcctcc caaagtgctg ggattacagg cgtgagccac tgcgcccggc ctatattcaa 2820 tgtttaaaac taattctagc tactctgtgg ggattggatt gttggggttc actagtggtt 2880 aggaagacta tttaggagca cagcagggaa ttcttcaggg aaaacaggtt tgtggcttca 2940 tggagtgcat tagtgataaa gatggtgaaa aagataaagt ggacagactt ggcatgtatt 3000 tttgcttagc ttgttaatga attactgtaa agggggtaga acaatcaagc ttattcctaa 3060 ggattttctt ttgacaaata aatgggtggt agtgttgttt attgagatag gaaaaactat 3120 gggaggaaat gatttgaagt gggtggtttg aaataaaagt tttgtttaaa tatgagatga 3180 ttgattgaca tttatgtgga gaaatccgaa ggtcaatggc atttaagaga ctcatggtga 3240 ggccagggct tcacgtattt atgttggcag cagcaatacg tgtagtgtgt taaattccag 3300 ggcgtggaag aggatacata gggagatgga ttgtgtgaag aaaaaagaac agggcacagg 3360 ccagcaaagg gggctgagaa agagcccaag gatgctggag aaaaaccaag agaacatcat 3420 gtgtgtaagt ccaggaaaat agattatttt caaggagaag ggagaggcca attgtggtga 3480 gtaccactaa gaggaggggc aagtgagaat atgatagaga agcaagtgct gggtttggtg 3540 gagtcgatat ttgcagtcaa tggagcatcc aggtaggaaa ctggattgga ccatttgaag 3600 agtgagtaaa agtgaggacg aggttaaggt tgactgtttt gagtagagag cttcagggaa 3660 ggattgttct ctgggttcag ggagccagct gaacctaaag gaaaaggcta aagaagctga 3720 agagaaggag gaggacctgt gaaccagaga tgctcagtca ttattagcga ggaaatatgg 3780 agagcccctg tgtgcagtgg tgactactca tgcaaaatgt cacacagcca atatttaaca 3840 cagccagtat ttcacacagc caatatttat tagtgacata gcatatacca gttattactc 3900 taggtcatga gaatggagtg ataaataaaa tgaatccagt cgccatcact atatgccatg 3960 taacattttg caatgactgt gtatcaggcc tatgaatttc agtattcaat ttcaataatg 4020 atcctgttgt atctgtggta tttaaaaaca tatacatctc tggaatctaa aattgagagg 4080 ttataagtaa cacccagtat tacaaattta gtgctggaaa tcagattgca gtttaaatct 4140 gagcatatag aaagtccgtt tcttctatgt cagcagatgc tttttgtgtg aggtttaggt 4200 atactgcatt atttgacata aaccagtgtt tctgccctat gtcttcagaa tgacaattct 4260 ttatgaaact aatagaagaa cagaagacaa ttgcaaaatc atgatgaaga tactaattgc 4320 tttagaatta aggaatacaa aaaataatat gagctgcagt tataggatca gaaaagttaa 4380 aatgggaatg tattcgagtg tttattatgt gatcagtgct aagaagtgtc atcatttaat 4440 tttacactta acggtaatcc tgtgaggatt acgctattat taaatgcatt tgatagatta 4500 caaaaaggct tatggttggt aaaaattgac ccaagtagaa gagatcgtgt ttttattcag 4560 gttttctgat tatagagttt gagagtttga ccatcattag tgagtagtga ctatattgtg 4620 tctgaattat tgacacaatt tctgatattc atatgtacca ggctgtttct tagagtgggg 4680 acagaaatgc aagggctgct agttctgatg tataggagaa actttcattc attttgcatt 4740 tatcatttta aacgttgtat atgtctatct gggcatgtgt tcaagaacac aaggaagtat 4800 taaatcactc cttcttctga ggtttgacta gcaagttggg ctagagttac aaataaaata 4860 caggttccta gtgaaatctg aatttcagat acacaaccat aatttattgg aaatccaaat 4920 ttaactggga atcttctatt attctctgct ctagaacgcc acacttctga tatttctcat 4980 tgctgtctaa gctcttgtgt gtttggtttt tggccatcgc tttcactgct ctttaagctc 5040 ccccagcgga gtggagaggt ctgttttccc tcgtttggat tcctagaggc agcgcaggcc 5100 tggcacaagg tcatcactaa ggaagtgttc acagggtgaa cgcggtgggt gctgttgaag 5160 gtaccggtaa agcgtgtggg atgagagaag gagcagagag tgcctttggg gctcccagga 5220 ggaggcggcg cgggctccgg tgctgggcgg atcctcctcc agctcctgct tggaggtctc 5280 cagaacaggc tggaggcagg gagggggtcc caaaagcctg gggatgagaa ggggttttcc 5340 cgcatggtcc cccaggcccc cgttcgcctc aggaagacgg aggatgagct cctgggctgc 5400 aggtggtggg cgttgcgggt ggggccggtt aaggttccag cgcccgcacc ccgctcaggg 5460 agccccggat ggtggcgtcg ctgtccgtgt cttctcagga ggccgccctg tgaccggatg 5520 gttcgtgtcc ccacagcacg tttcctgtgg cagcctaaga gggagtgtca tttcttcaat 5580 gggacggagc gggtgcggtt cctggacaga tacttctata accaggagga gtccgtgcgc 5640 ttcgacagcg acgtggggga gtaccgggcg gtgacggagc tggggcggcc tgacgctgag 5700 tactggaaca gccagaagga cttcctggaa gacaggcgcg ccgcggtgga cacctactgc 5760 agacacaact acggggttgg tgagagcttc acagtgcagc ggcgaggtga gcatggtggg 5820 gggcggggcc tgggtccttg tgagctggga atctgagtgt gtgtgtgtgt gtgtgtgtgt 5880 gtgtgtgtgt gtgagagaga gagagagagg aagagagaga gagagcgcca tctgtgagca 5940 tttagaatcc tctcagtccg gagcaagcag ttctgagagc acaggtgtgt gtgtaaagtg 6000 tggatttgtc tgtgtctgtg tgtctgttgt gggaggggag gcaggagggg gctgtttctt 6060 atccttggag acctctgtgg ggaggtgaca agggaggtgg gtgctggggg ctggagagag 6120 aggagacctt gattatctcg gtccttagag atgcagggaa gggaaatgta aggggtgtgt 6180 ggttggggtg aaggtttagg ggaggactgc tgaggggtaa ggcaggtttg ggataatgtg 6240 aggaggccag ttccagactc tccctggcat acacccttcg tgtaatctct gaattaaaag 6300 tgtgtgctgt ttgtttgtaa aagcaataga ttaatttcta gaggaactga gtagacctct 6360 gaggcacctc tgaagcttca ttagatctaa atttcttcct agttttttgt ttttttcagt 6420 gtgtatattt ttacatagta gaaatgactg tgaaactaac tttttgaatt aaagttttga 6480 cacggttact attttattat aatgctggta gttttctagt agttacatat tattctttta 6540 tatataatat ttgtgacaca actcacctca ctttcccgtt tgttgacctt tattatgaca 6600 ttcaccagaa gttgaaattg tgtgtttctg gttaattttt aatttatatt ttttatttgt 6660 aattcctttg aattattttg ccctatttat tggccgatta taattattgc tctaagaatt 6720 ccctattgta tttggtaggt aatggacaat gatctacggt ctaatatctt gagggcttag 6780 tatttttctc agtgactttc tgcgttcttt gtactataag attattaaca ctttattgat 6840 atttgatcca gcatttgctc cagtttgtgg tttgtatgtg gattttgaaa attcttttcc 6900 atgttaagaa tttgaacatt tttatttaat aaaatatatt gcaacatttt tattaatgat 6960 ctacaatcca tctgaaatct gccattttgt ggcattgttg tctccaggtt tctccttact 7020 tctaaaaaaa tagttgtatt tattgagagt atgctagtgt cggggatttt cctgggcata 7080 agcaccccaa gtaacgagtc ccagacactg ccttaatcca aatgtgattc tggaaagaaa 7140 aatcatttta caatgatagg cctaataata attatgcttg tgttgcacgg gagatgcatt 7200 gatcagctaa atgtaaatat aagaactttc aaaacttaaa tgacgttccc taatccttct 7260 ctctgcttca ggactcatgc ttttctagga aagtaaaaat ttggagaatc atttctgtct 7320 gtcccacctt cccaggggca gaacaatttc tgttgtgttc taaggtgtga gtgcatggga 7380 gtagtattcc taaaattcat acttggtttc ctcatgtacc caactctgtc cctttatcta 7440 tgcatattgc tttaaatcat atttttctgt caaggtgtac aaggatgata aataggtgcc 7500 aagtggagca ctcaagtgtg atgagtgccc tcacagtgga atggagtgag aagctttctg 7560 acctcataaa ctgaaggcta tcttcagtca ttgttttata tattttacgt gcattaatcc 7620 tcatataacc ccaagaggta aattagtata attatccttc attgtaggtg acaaagttga 7680 gacacagaag aatcaaaaaa ctcttccagg atcaaccagt aaaaggcaga ccttggattc 7740 gaaccaggca acctggctca aatatcagtt ttaattacta cactctgtac tttccaagat 7800 ttgtaaacag tttgacaatg catgccgatt taaaactatg aagaaacaaa cacaattttt 7860 cacaacacct ctcaaatcta atgggtcctc actgtcaaga ttaaattcca ggctgatgac 7920 actgtaaggt cacatggcca gctgtgctat aggcctggtc aaggccagag cctgggtttg 7980 cagagaagca gacacacagc caaaccagga gacttactct gtcttcctga ctcattccct 8040 ctacgttgtt tttctcctag tccaacctaa ggtgactgta tatccttcaa agacccagcc 8100 cctgcagcac cacaacctcc tggtctgctc tgtgagtggt ttctatccag gcagcattga 8160 agtcaggtgg ttcctgaacg gccaggaaga gaaggctggg atggtgtcca caggcctgat 8220 ccagaatgga gactggacct tccagaccct ggtgatgctg gaaacagttc ctcgaagtgg 8280 agaggtttac acctgccaag tggagcaccc aagcgtgaca agccctctca cagtggaatg 8340 gagtgagcag ctttctgact tcctaaattt ctcacccact aagaagggga ccgtgctaat 8400 ccctgagtgt caggttcctc ctctcccaca tcctatttta atttgctcca tgttctcatc 8460 tccatcagca caggtcactg ggggtagccc tgtaggtgtt tctagaaaca cctgtacctc 8520 ctggagaagc agtctcgcct gccaggcggg agagactgtc cctcttttga acctccccat 8580 gattttgcag gtcagggtca cccactctcc caggctccag gccctgcctc tgggtctgag 8640 actgagtttc tggtgctgtt gctctgagtt attttttgtg atctgggaag aggagaagtg 8700 taggggccta cctgacatga ggggagtcca atctcagccc tgctttttat tagctttgtc 8760 actctagaca aactacttat cctcattgag tctcaggctt tctgtggatc agatgttgaa 8820 cttgtgcctt acatcaaggc tgtaatattt gaatgagttt gatgtctgaa catcgtaact 8880 gttcagtgta atttgaaatc ctttttttct cctgaaatgg ctagttattt tagttcttgt 8940 gaggcagctt tctgccccat tttcaaagct ctgaatctta gagtctcaag taaaaaggtt 9000 caatttggaa taaacatcac taaacctggc ttcctctctc aggagcacgg tctgaatctg 9060 cacagagcaa gatgctgagt ggagtcgggg gctttgtgct gggcctgctc ttccttgggg 9120 ccgggctgtt catctacttc aggaatcaga aaggtgagga gcctttggga gctggctctc 9180 tccataagct tttctggagg aggaactatg gctttgctga ggttagttct cagtatatga 9240 gtggccctga ataaagcctt tctttcccca aacggctcta atgtcctgct aatccagaaa 9300 tcatcagtgc atggttacta tgtgaaagca taatagcttg tggcctgcag agacgagagg 9360 aaggttaaca agtaggggtc ctctggtttg agatcctgga gcaaattaag gaagagccac 9420 taaggctaat ggaattacac tggatcctgt gacagacact tcaggcttca tgggtcacat 9480 ggtctgtttc tgctcctttc tgccctggtt ggtgtgggtt gtggtgttag agaaatctca 9540 ggtgggagat ctggggctgg gacattgtgt tggaggacag atttgcttca ataactttta 9600 agtgtatatc ttttcctctt tttcccagga cactctggac ttcagccaac aggtaatacc 9660 ttttaatcct ctt 9673 // ID KX687265; SV 1; linear; genomic DNA; STD; HUM; 10780 BP. XX AC KX687265; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH24 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*16_02_01v2 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-10780 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-10780 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 77cf82215df1aa1159a7f8ffec411ebb. XX FH Key Location/Qualifiers FH FT source 1..10780 FT /organism="Homo sapiens" FT /isolate="IH24" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <173..>9650 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*16_02_01v2" FT mRNA join(<173..272,5537..5806,8059..8340,9041..9151, FT 9627..>9650) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*16_02_01v2" FT /product="MHC class II antigen" FT CDS join(173..272,5537..5806,8059..8340,9041..9151,9627..>9650) FT /codon_start=1 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*16_02_01v2" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G176" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G176" FT /protein_id="AST15779.1" FT /translation="MVCLKLPGGSCMTALTVTLMVLSSPLALAGDTRPRFLWQPKRECH FT FFNGTERVRFLDRYFYNQEESVRFDSDVGEYRAVTELGRPDAEYWNSQKDLLEDRRAAV FT DTYCRHNYGVGESFTVQRRVQPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFLN FT GQEEKAGMVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRARSE FT SAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPT" XX SQ Sequence 10780 BP; 2824 A; 2167 C; 2616 G; 3173 T; 0 other; gctattgaac tcagatgctg attggttctc caacacgaga ttacccaacc caggagcaag 60 gaaatcagta acttcctccc tataacttgg aatgtgggtg gaggggttca tagttctccc 120 tgagtgagac ttgcctgctt ctctggcccc tggtcctgtc ctgttctcca gcatggtgtg 180 tctgaagctc cctggaggct cctgcatgac agcgctgaca gtgacactga tggtgctgag 240 ctccccactg gctttggctg gggacacccg acgtaagtgc acattgcggg tgctgagcta 300 ctatggggtg gggaaaatag ggagttttgt taacattgtg cccaggccat gtcccttaag 360 aaattgtgac gttttcttca gagattgccc atctttatca ttggatccca aattatttcc 420 tccataaaag gagcttgggt acttgccctc ttcatgagac ttgtgtaagg ggcctttgca 480 caagtcattt cttttcaaat ctccaccaat aaaacctttg cctcacatgt cctcagggtc 540 tttagaggat ttagaaataa ggattctaaa ataaattccc catacagcac ttccctttat 600 tatgttgact tatgtcagac aaaaggaggt tcttactgaa aattttgtgg gagtcaaggg 660 aattcaaagg gtctctccta gacgatccag tgttaggttc cccacaggac ctttggtgtt 720 ggccatagtc ctcatatgtg aggatggacc cagtggcctc cccattatct cctttctttt 780 cttgctgaac tccaatgttt ataaggcctg tatccctgta gcgtatgtag gttctctgac 840 agaagttata cttagtgctc ttcctttctt gtggggaaaa gtccctggaa ctgaagctga 900 gattgttagt acttggagtc accttacaga tacagagcat ttatgaggta ttctttggtg 960 cctaaagaac ttaaggcatc ctctgaaaaa ctagcccagg ttcgtgttca ttatgaatct 1020 tttttaacct ttctgtactt gtttctcttg catctcctat gtgctctaac tagacatgac 1080 agaagagatt taactaatgt ataaattata tgaaattcta ttttttaagt caaaaataat 1140 caactatcag aaatttaata atgttcaaac tatatactct gtgtggggtt accgagatga 1200 tgtgaacatt gttcacgtct catagggctg aaagtcaatg ggcaagtctt gggaactcat 1260 tgtcttactg gggtcttgtc ctaaatttcc taggttcacc catcatgccc tcagctttcc 1320 ttaactagcc atgtctgctt acctcttcct ccagtttcta tttttcccca gctatgttgt 1380 catcatttcc agaaatctct aaagcttgca cagaacctta gcactatgag attcattgaa 1440 agagactttt tttctctttt tgaggtaggg cctggctctg tcacccagtc tatagctcag 1500 tggtgtgatc gaggctcact gcaacctctg ccacccatgc tcaagtgatc ctccctcctc 1560 aggctccaga gtagctggga atacaggcag gcaaccacgc ccagctaatt tttgtaattt 1620 tggtagacat gagattttgc catgttgccc aggctggtct taaactgctg gcttcaagca 1680 atcctcctgc cttggcctcc caacatgcta ggattataga tgtgagccac tgtgcccagg 1740 caaaagagat gactcttaat aaaaaaattt cctttttctt aaatcactgt ttctttatct 1800 gtgaattctt cttccaacta gaaggaggag aaaaaagaag tttgcctgta tttatcactg 1860 ggaggagaag gggtctagtg tgacattaaa atgaaagagt gctggagctt gagccccttc 1920 ttgctttcca ggatccctac agtgatcagt tcccataccc tggtttattc atgtaaacca 1980 cacttatttt tctcagcagc tactctttac tgggctccat tctaggttca aatcattcta 2040 tttgattaag ttagagagcg tccctactct catggaagtt acacaagagt agaggagaca 2100 gacactaacc caataagcat ttaacaaaga agataatgtt agagagtcat agtgcactga 2160 agaaaagaca tcaggtttgt gaaaaagaga gacatggatt cacctacttt agttcatatg 2220 ttagggagct ccacctgaga aagtgacatt cagctgagac aacaaaataa gtagacagtc 2280 gtgaagatct aagggatgaa agttccaggg agaccgaatc gggggaaagc cctgatgtgt 2340 taaattatgt ggagggagag aaagaaagct agaggggctg atgtatagaa agcaaggaaa 2400 tggagaggca gaagatgagg gtaggacaca gagaggaatt caggagcctc atcattatag 2460 gctctgatgt ccacagtaaa aaaaaattaa atttttatta tttatttatt tgtttatttt 2520 attttatttt gtgatggagt ctctctgtgt tgcccagggt agattgctgt ggcacaatct 2580 cggctcactg caacctccgc ctcctgggtt caagcgattc tcctgcctca gcctcccgat 2640 tagctggggc cacaggcgca tgccaccaca cctggctaat tttttgtatt tttagtaggg 2700 atagggtttc accgtgttag ccaggatggt ctcgatctcc tgacctcgtg atccgcccgc 2760 cttggcctcc caaagtgctg ggattacagg cgtgagccac tgcgcccggc ctatattcaa 2820 tgtttaaaac taattctagc tactctgtgg ggattggatt gttggggttc actagtggtt 2880 aggaagacta tttaggagca cagcagggaa ttcttcaggg aaaacaggtt tgtggcttca 2940 tggagtgcat tagtgataaa gatggtgaaa aagataaagt ggacagactt ggcatgtatt 3000 tttgcttagc ttgttaatga attactgtaa agggggtaga acaatcaagc ttattcctaa 3060 ggattttctt ttgacaaata aatgggtggt agtgttgttt attgagatag gaaaaactat 3120 gggaggaaat gatttgaagt gggtggtttg aaataaaagt tttgtttaaa tatgagatga 3180 ttgattgaca tttatgtgga gaaatccgaa ggtcaatggc atttaagaga ctcatggtga 3240 ggccagggct tcacgtattt atgttggcag cagcaatacg tgtagtgtgt taaattccag 3300 ggcgtggaag aggatacata gggagatgga ttgtgtgaag aaaaaagaac agggcacagg 3360 ccagcaaagg gggctgagaa agagcccaag gatgctggag aaaaaccaag agaacatcat 3420 gtgtgtaagt ccaggaaaat agattatttt caaggagaag ggagaggcca attgtggtga 3480 gtaccactaa gaggaggggc aagtgagaat atgatagaga agcaagtgct gggtttggtg 3540 gagtcgatat ttgcagtcaa tggagcatcc aggtaggaaa ctggattgga ccatttgaag 3600 agtgagtaaa agtgaggacg aggttaaggt tgactgtttt gagtagagag cttcagggaa 3660 ggattgttct ctgggttcag ggagccagct gaacctaaag gaaaaggcta aagaagctga 3720 agagaaggag gaggacctgt gaaccagaga tgctcagtca ttattagcga ggaaatatgg 3780 agagcccctg tgtgcagtgg tgactactca tgcaaaatgt cacacagcca atatttaaca 3840 cagccagtat ttcacacagc caatatttat tagtgacata gcatatacca gttattactc 3900 taggtcatga gaatggagtg ataaataaaa tgaatccagt cgccatcact atatgccatg 3960 taacattttg caatgactgt gtatcaggcc tatgaatttc agtattcaat ttcaataatg 4020 atcctgttgt atctgtggta tttaaaaaca tatacatctc tggaatctaa aattgagagg 4080 ttataagtaa cacccagtat tacaaattta gtgctggaaa tcagattgca gtttaaatct 4140 gagcatatag aaagtccgtt tcttctatgt cagcagatgc tttttgtgtg aggtttaggt 4200 atactgcatt atttgacata aaccagtgtt tctgccctat gtcttcagaa tgacaattct 4260 ttatgaaact aatagaagaa cagaagacaa ttgcaaaatc atgatgaaga tactaattgc 4320 tttagaatta aggaatacaa aaaataatat gagctgcagt tataggatca gaaaagttaa 4380 aatgggaatg tattcgagtg tttattatgt gatcagtgct aagaagtgtc atcatttaat 4440 tttacactta acggtaatcc tgtgaggatt acgctattat taaatgcatt tgatagatta 4500 caaaaaggct tatggttggt aaaaattgac ccaagtagaa gagatcgtgt ttttattcag 4560 gttttctgat tatagagttt gagagtttga ccatcattag tgagtagtga ctatattgtg 4620 tctgaattat tgacacaatt tctgatattc atatgtacca ggctgtttct tagagtgggg 4680 acagaaatgc aagggctgct agttctgatg tataggagaa actttcattc attttgcatt 4740 tatcatttta aacgttgtat atgtctatct gggcatgtgt tcaagaacac aaggaagtat 4800 taaatcactc cttcttctga ggtttgacta gcaagttggg ctagagttac aaataaaata 4860 caggttccta gtgaaatctg aatttcagat acacaaccat aatttattgg aaatccaaat 4920 ttaactggga atcttctatt attctctgct ctagaacgcc acacttctga tatttctcat 4980 tgctgtctaa gctcttgtgt gtttggtttt tggccatcgc tttcactgct ctttaagctc 5040 ccccagcgga gtggagaggt ctgttttccc tcgtttggat tcctagaggc agcgcaggcc 5100 tggcacaagg tcatcactaa ggaagtgttc acagggtgaa cgcggtgggt gctgttgaag 5160 gtaccggtaa agcgtgtggg atgagagaag gagcagagag tgcctttggg gctcccagga 5220 ggaggcggcg cgggctccgg tgctgggcgg atcctcctcc agctcctgct tggaggtctc 5280 cagaacaggc tggaggcagg gagggggtcc caaaagcctg gggatgagaa ggggttttcc 5340 cgcatggtcc cccaggcccc cgttcgcctc aggaagacgg aggatgagct cctgggctgc 5400 aggtggtggg cgttgcgggt ggggccggtt aaggttccag cgcccgcacc ccgctcaggg 5460 agccccggat ggtggcgtcg ctgtccgtgt cttctcagga ggccgccctg tgaccggatg 5520 gttcgtgtcc ccacagcacg tttcctgtgg cagcctaaga gggagtgtca tttcttcaat 5580 gggacggagc gggtgcggtt cctggacaga tacttctata accaggagga gtccgtgcgc 5640 ttcgacagcg acgtggggga gtaccgggcg gtgacggagc tggggcggcc tgacgctgag 5700 tactggaaca gccagaagga cctcctggaa gacaggcgcg ccgcggtgga cacctactgc 5760 agacacaact acggggttgg tgagagcttc acagtgcagc ggcgaggtga gcatggtggg 5820 gggcggggcc tgggtccttg tgagctggga atctgagtgt gtgtgtgtgt gtgtgtgtgt 5880 gtgtgtgtgt gagagagaga gagagaggaa gagagagaga gagcgccatc tgtgagcatt 5940 tagaatcctc tcagtccgga gcaagcagtt ctgagagcac aggtgtgtgt gtaaagtgtg 6000 gatttgtctg tgtctgtgtg tctgttgtgg gaggggaggc aggagggggc tgtttcttat 6060 ccttggagac ctctgtgggg aggtgacaag ggaggtgggt gctgggggct ggagagagag 6120 gagaccttga ttatctcggt ccttagagat gcagggaagg gaaatgtaag gggtgtgtgg 6180 ttggggtgaa ggtttagggg aggactgctg aggggtaagg caggtttggg ataatgtgag 6240 gaggccagtt ccagactctc cctggcatac acccttcgtg taatctctga attaaaagtg 6300 tgtgctgttt gtttgtaaaa gcaatagatt aatttctaga ggaactgagt agacctctga 6360 ggcacctctg aagcttcatt agatctaaat ttcttcctag ttttttgttt ttttcagtgt 6420 gtatattttt acatagtaga aatgactgtg aaactaactt tttgaattaa agttttgaca 6480 cggttactat tttattataa tgctggtagt tttctagtag ttacatatta ttcttttata 6540 tataatattt gtgacacaac tcacctcact ttcccgtttg ttgaccttta ttatgacatt 6600 caccagaagt tgaaattgtg tgtttctggt taatttttaa tttatatttt ttatttgtaa 6660 ttcctttgaa ttattttgcc ctatttattg gccgattata attattgctc taagaattcc 6720 ctattgtatt tggtaggtaa tggacaatga tctacggtct aatatcttga gggcttagta 6780 tttttctcag tgactttctg cgttctttgt actataagat tattaacact ttattgatat 6840 ttgatccagc atttgctcca gtttgtggtt tgtatgtgga ttttgaaaat tcttttccat 6900 gttaagaatt tgaacatttt tatttaataa aatatattgc aacattttta ttaatgatct 6960 acaatccatc tgaaatctgc cattttgtgg cattgttgtc tccaggtttc tccttacttc 7020 taaaaaaata gttgtattta ttgagagtat gctagtgtcg gggattttcc tgggcataag 7080 caccccaagt aacgagtccc agacactgcc ttaatccaaa tgtgattctg gaaagaaaaa 7140 tcattttaca atgataggcc taataataat tatgcttgtg ttgcacggga gatgcattga 7200 tcagctaaat gtaaatataa gaactttcaa aacttaaatg acgttcccta atccttctct 7260 ctgcttcagg actcatgctt ttctaggaaa gtaaaaattt ggagaatcat ttctgtctgt 7320 cccaccttcc caggggcaga acaatttctg ttgtgttcta aggtgtgagt gcatgggagt 7380 agtattccta aaattcatac ttggtttcct catgtaccca actctgtccc tttatctatg 7440 catattgctt taaatcatat ttttctgtca aggtgtacaa ggatgataaa taggtgccaa 7500 gtggagcact caagtgtgat gagtgccctc acagtggaat ggagtgagaa gctttctgac 7560 ctcataaact gaaggctatc ttcagtcatt gttttatata ttttacgtgc attaatcctc 7620 atataacccc aagaggtaaa ttagtataat tatccttcat tgtaggtgac aaagttgaga 7680 cacagaagaa tcaaaaaact cttccaggat caaccagtaa aaggcagacc ttggattcga 7740 accaggcaac ctggctcaaa tatcagtttt aattactaca ctctgtactt tccaagattt 7800 gtaaacagtt tgacaatgca tgccgattta aaactatgaa gaaacaaaca caatttttca 7860 caacacctct caaatctaat gggtcctcac tgtcaagatt aaattccagg ctgatgacac 7920 tgtaaggtca catggccagc tgtgctatag gcctggtcaa ggccagagcc tgggtttgca 7980 gagaagcaga cacacagcca aaccaggaga cttactctgt cttcctgact cattccctct 8040 acgttgtttt tctcctagtc caacctaagg tgactgtata tccttcaaag acccagcccc 8100 tgcagcacca caacctcctg gtctgctctg tgagtggttt ctatccaggc agcattgaag 8160 tcaggtggtt cctgaacggc caggaagaga aggctgggat ggtgtccaca ggcctgatcc 8220 agaatggaga ctggaccttc cagaccctgg tgatgctgga aacagttcct cgaagtggag 8280 aggtttacac ctgccaagtg gagcacccaa gcgtgacaag ccctctcaca gtggaatgga 8340 gtgagcagct ttctgacttc ctaaatttct cacccactaa gaaggggacc gtgctaatcc 8400 ctgagtgtca ggttcctcct ctcccacatc ctattttaat ttgctccatg ttctcatctc 8460 catcagcaca ggtcactggg ggtagccctg taggtgtttc tagaaacacc tgtacctcct 8520 ggagaagcag tctcgcctgc caggcgggag agactgtccc tcttttgaac ctccccatga 8580 ttttgcaggt cagggtcacc cactctccca ggctccaggc cctgcctctg ggtctgagac 8640 tgagtttctg gtgctgttgc tctgagttat tttttgtgat ctgggaagag gagaagtgta 8700 ggggcctacc tgacatgagg ggagtccaat ctcagccctg ctttttatta gctttgtcac 8760 tctagacaaa ctacttatcc tcattgagtc tcaggctttc tgtggatcag atgttgaact 8820 tgtgccttac atcaaggctg taatatttga atgagtttga tgtctgaaca tcgtaactgt 8880 tcagtgtaat ttgaaatcct ttttttctcc tgaaatggct agttatttta gttcttgtga 8940 ggcagctttc tgccccattt tcaaagctct gaatcttaga gtctcaagta aaaaggttca 9000 atttggaata aacatcacta aacctggctt cctctctcag gagcacggtc tgaatctgca 9060 cagagcaaga tgctgagtgg agtcgggggc tttgtgctgg gcctgctctt ccttggggcc 9120 gggctgttca tctacttcag gaatcagaaa ggtgaggagc ctttgggagc tggctctctc 9180 cataagcttt tctggaggag gaactatggc tttgctgagg ttagttctca gtatatgagt 9240 ggccctgaat aaagcctttc tttccccaaa cggctctaat gtcctgctaa tccagaaatc 9300 atcagtgcat ggttactatg tgaaagcata atagcttgtg gcctgcagag acgagaggaa 9360 ggttaacaag taggggtcct ctggtttgag atcctggagc aaattaagga agagccacta 9420 aggctaatgg aattacactg gatcctgtga cagacacttc aggcttcatg ggtcacatgg 9480 tctgtttctg ctcctttctg ccctggttgg tgtgggttgt ggtgttagag aaatctcagg 9540 tgggagatct ggggctggga cattgtgttg gaggacagat ttgcttcaat aacttttaag 9600 tgtatatctt ttcctctttt tcccaggaca ctctggactt cagccaacag gtaatacctt 9660 ttaatcctct tttagaaaca gacacagttt ccctagtgag aggtgaagcc agctggactt 9720 ctgggtgggg tggggacttg gagaactttt cttacaagag gtttcttttt tttttttttt 9780 ttgagacgga gtctcgctct gtcgcccagg ctggagtgca gtggcgggat ctcggctcac 9840 tgcaagctcc gcctcccggg ttcacgccat tctcctgcct cagcctccca agtagctggg 9900 actacaggcg cccgccacta cgcccggcta attttttgta tttttagtag agacggggtt 9960 tcaccgtttt agccaggatg gtctcgatct cctgacctcg tgatccgccc gcctcggcct 10020 cccaaagtgc tgggattaca ggtgtgagcc accgcgcccg gcctacaaga ggtttctaaa 10080 tgcaccaatc agtgctttgt aaaaacacac caataggttc tctgtggcta gctggatgtt 10140 tgtaaaatgg accaattcgc actctgtaaa atagaccaat cagcactctt taaaatggac 10200 caatcagcac ttttaaaatg ggccaatcac cactctttaa aatggaccaa tcagcactct 10260 ttaaaatgga ccaatctgca ggacatgggc agggacaaat acaggaataa aagctggcca 10320 ccccaaccag cagtggcaac ccactcaggt cctcttccct gctgtggaag ttttgttctt 10380 ttgatcttca caataaatct tgctgctgcc cactctttgg gtccctgccg cctttaagag 10440 ctgtaacact cactgtgaag gtctgcagga agtcagcgag accacaaacc caccggaagg 10500 aacaaactca ggacacacca gaatgatggt agaggtgata aggcatgaga cagaaataat 10560 aggaaagact ttggatccaa atttctgatc aggcaattta caccaaaatt cctcctctcc 10620 acttagaaaa ggcctgtgct ctgcgggact attggctcag gggagactca ggaacttctt 10680 tttcttcttc ctgcagtgct ctcatctgag cccttgaaag aggggaaaag aaactgttag 10740 tagagccagg ttgaaaacaa cactctcctc tgtcttttgc 10780 // ID KX687266; SV 1; linear; genomic DNA; STD; HUM; 8513 BP. XX AC KX687266; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH50 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*13_36e1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-8513 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-8513 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; b400493c1ee588f330db0155bdbe248a. XX FH Key Location/Qualifiers FH FT source 1..8513 FT /organism="Homo sapiens" FT /isolate="IH50" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <173..>8513 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*13_36e1" FT mRNA join(<173..272,8268..>8513) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*13_36e1" FT /product="MHC class II antigen" FT CDS join(173..272,8268..>8513) FT /codon_start=1 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*13_36e1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G193" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR014745" FT /db_xref="UniProtKB/TrEMBL:A0A223G193" FT /protein_id="AST15780.1" FT /translation="MVCLRLPGGSCMAVLTVTLMVLSSPLALAGDTRPRFLEYSTSECH FT FFNGTERVRFLDRYFHNQEENVRFDSDVGEYRAVTELGRPDAEYWNSQKDILEDERAAV FT DTYCRHNYGVG" XX SQ Sequence 8513 BP; 2313 A; 1718 C; 1939 G; 2543 T; 0 other; gctattgaac tcagatgctg attcgttctc caacactaga ttacccaatc caggagcaag 60 gaaatcagta acttactccc tataacttgg aatgtgggtg gaggggttca tagttctccc 120 tgagtgagac ttgcctgctg ctctggcccc tggtcctgtc ctgttctcca gcatggtgtg 180 tctgaggctc cctggaggct cctgcatggc agttctgaca gtgacactga tggtgctgag 240 ctccccactg gctttggctg gggacaccag acgtaagtgc acattgtggg tgctgagcta 300 ctatgcggtg gggaaaatag ggagttttgt taacattgtg cccaggccat gtaccttaag 360 aaattgtgac gtatttttca gagattgccc gtctttatca tatggatccc aaataatttc 420 cccaccacaa aaggagcttg gctacttgcc cactccatga gacttgtgta aggggcctcc 480 atacaggtca tttctactca aatctccacc aataaaacct ttgcatcaca tgtcctcagg 540 gtctttagag gatttagaaa taaggatgct aaaataaatt ccccatacag cacttgcctt 600 tattatgttg acttaagtca gacaaaagga ggttttttct gaaaattttg tggaagtcaa 660 gggaatttaa agggtctctc ccaaacgatc ctgggttatg tcacccacag gacctttggt 720 gttggcccct cttcctcata tgtgaggatg gacccagtgg cctccccatt atctactttc 780 ttttctttct gaactccaat gtttataaag cctgtacccc tgtagtgtat gtaggttgtc 840 tgacagaagt tatacttagt gctctttctt tcttgtgggg aaaaatccct ggaactgaag 900 ctgagatctt tagtacttgg agtcacctta cagatacaga gcatttatga ggtattcttt 960 ggtgcctaaa gaacttaagg catcctctga aaacctggcc caggttagtg tttattgtga 1020 atctctttta acctttctat acttgtttct cctacatctc ctaagtgctc caaccagaca 1080 tgacagaaga gatttaacta acgtagtatg agttatataa aattctattt ttgtaagtca 1140 aaaataatca aatatcagaa atttaataat gttcaaacta tatactctgt gtggggttac 1200 cgagacaatg tggacattgt tcacatctca tagggctgca agtcaatggg caagtcctgg 1260 gaactcattg tcttactggg gtcttgtcct aaatttcata ggttcaccca tcatgccctc 1320 aactttcctt aattagccat gtctgcttac ctcttcctcc agtttctctc ttatttttcc 1380 ccagctatgt tgttatcatt tccagaaatc tctaaagctt gcacagatcc ttagcactat 1440 gagatccatt gaaagagata gtttttttct ttttgagata gggcctggct ctgtcaccca 1500 ggctgtagct cagtggtgcg atcgaggctc actgcaacct ctgcctccca cgctcaagtg 1560 atcctccctc ctcaggctcc agagtagctg ggaatacagg caggcaacca cgcccagcta 1620 atttttgtaa ttttggtaga aatgagattt tgccatgttg cccaggctgg tcttaaactg 1680 ctggactcaa gcaatcctcc tgccttggcc tcccaacatg ctaggattat agatgtgagc 1740 cactgtgccc aggcaaaaag agatgactct caataaaaaa aagtcctttt tcttaaatca 1800 ctgtttcttt atctgtgaat tcttcttcca actagaagga ggagaaagaa gtttgcctgt 1860 atttctcacc aggaggagaa ggggtctagt gtgacatcag aatgaaagag tgctggagtt 1920 tgagcccctt cttgctttca aagatcccca cagttatcac ttcccatacc ctggtttatt 1980 catgtaaacc acacttattt ttcttagcag ctactgtgta ctcggctcca ttctaggttc 2040 agatcattct attttattaa gacagagagg gtcccgactc tcatggaagt tacacaacaa 2100 tagaggagac agacactaac ccaataagca tttaacaaag aataaaatat tagagagtca 2160 tagtgcactg aagaaaagac ctcaggtttg tgaagaagag agacatggat tcacctactt 2220 tagttcatat gtttagggag ctctacctga gaaagtgaca ttcagctgag acaacaaaat 2280 aagtagacag tcatgaagat ctaatggacg aaagctccag agagaccaaa tgggggtaaa 2340 gccctggtgt gggaaattat gtggagagag agaaagaagg ctagaggggc tgacgtatag 2400 aaagtaagga aatggagagg cagaagatga ggtaggacac agagagaaag tcaggagcct 2460 catcattata ggctctgatg tccacggtaa aaaatttgaa ttttatttta tttatttatt 2520 ttattttatt tatttattta tttatttatt ttttgagatg gagtctcgct ttgttgccca 2580 ggctggagtg cagtggcgtg atctcagctc actgcaagct ccacctcctg ggttcatgcc 2640 attctcctgc ctcagcctcc ctagtagctg ggactacagg cacctgccac cacgcctggc 2700 taatttttag tatttttagt agtgagggca tttcgtcatg ttagccaggg tggtctccat 2760 ctcctgacct cgtgatccac ctgcctcagc ctcccaaagt gctgagacta caggtgtgag 2820 ccaccacgcc tggcctattt tttttttttt ttttgagacg gagtttcgtt cttgttgccc 2880 aggctggagt gcaatggtgc aatctcggct cactgcaacc ttcgcctccc tggttcaagt 2940 gattctcctg cctcagcttc ccaagtatct gagattacag gcacccacca ccatacctgg 3000 ctaattttta tttttttgta tttttagtag acatagggta tcaccatgtt gaccatgctg 3060 gtctcgaact cctgacctca gataatctgt ctgccttggc ctcccaaagt gctgggatta 3120 caggcgtgag ccaccgcggc cggactgaat tttatttaaa tagatacgag aagctactgt 3180 atggttacaa ggagagtcaa tttatattca atttattttt attttatttt atttttttgg 3240 tgatggggtc ttgctctgtt gcccaggcta gattgtagtg gcacaatctc ggctcactgc 3300 aacctctgcc ttctgggttc aggcgattct cctgactcag cctccagagt agctgggacc 3360 acaggtacat gccaccacac ctggctaagt ttttgtattt tttagtagag acaggatttc 3420 accatgttag ccaggatggt ctcgatctcc tgacctcgtg atccacccat cttggcctcc 3480 caaagtgcag ggattacagg cctgagccac tgcgcccggc ctatattcaa tttttaaaac 3540 taattctagc tactctgtgg ggattggaat gttggggttc acaagtggtc aggaagacta 3600 tttaggagca cagcagggaa ttctccagcg aaaacaggct tgtggcttca tggagtgcat 3660 tagtgataaa gacggtgaaa aagataaagt ggacagactt ggcatgtatt tttccttagc 3720 ttgttaatga attactgtaa agggggtaga acaatcaagc ttattcctaa ggattttgtt 3780 ttgacaaata agtgggtggt agtgttgttt attgagatag gaaaaactat gggaggaaat 3840 tatttgaagt gggtggttgg aaataaaagt tttgtttaaa tttgagatga tttattgaca 3900 tttatgtgga gcaatcagaa ggtcaatggc atttaagaga ctcatggtga ggtgaagcta 3960 gggcttcaag tatttatgtt ggcggcatca atacgtgtag tgtgttaaat tccagggagt 4020 ggaagaggat acatagggag atggattgtg tggagaaaaa agaacagggc acaggccagc 4080 aaagggggct gagaaagagc ccagggatgt tggagaaaaa tcaagagaac atgatgcatg 4140 taagtcaagg aaaatagatt tttttcaagg agaagggaga ggccaattgt ggtgagtacc 4200 actaagcgga gggggaagtg agaacgtgac agagaagcaa gtgctgagtt tggtggagtt 4260 gatatttgca gtcagtggag tatccaggga ggaaactgga ttggacaatt tgaagagcga 4320 gtagaagtga ggatgaggtt aagattgact gttttgagta gagagcttca gggaaggact 4380 gcactctggg ttcagggagc cagctggatc aaaaggaaaa ggctaaagag gctgaagaga 4440 agcaggagga cctgtgaacc agagatgctc agtcatcatt agcgaggaaa tactagagag 4500 cccctgtgtg cagtgatgac tactcatgca gaaggtcaca cagccaatat ttaacacagc 4560 cagtatttca cacagctaat atttattagt gacatagaat ataccagtta ttactctagg 4620 tcatgagaat ggagtgataa ataaaatgaa tccggtcgcc atcagtatat gccatgtaac 4680 attttgcagt gactgtgtac caggcctatg aatttctgta tgcaatttca ataatgatcc 4740 tgctgtatct gtggtgttta aaaacatata catctctgga atctaaaatt gagaggttat 4800 aagtaaaacc cagtattaca aattgagtgc tggaaatcag attgcagttt aaatctgagc 4860 atataggaaa tccctttctc ctatgtcagc agatgccttt tgtgtgaggt ttagctggac 4920 tgcattatta gacataaacc agtgtttctg ccctatgttt tcagaatgac aattctttat 4980 gaaactcata gaagaacaga agacaactgc aaaatcatga tgaagatagt aattgcttta 5040 gaattaagga atacaaaaaa taatgtgagc tgtagttata gggatcataa aagtttaaat 5100 gggaatgtat ttgagtatgt gatcagtgct aagaagagtc atcatttaat tttacactta 5160 acagtaatct cgtgaggatt acgctattat taaatgcatt tgatagatta caaaaaggct 5220 tatggttggt aaaaattgac ccaagtagaa gagatcatgt ttttattcag gttttctgat 5280 tctagagttt gagagtttgt ccatcattag tgagtagtga ctatattgtg tctgaattat 5340 tgacagaatt tctgatattc atatgtacca ggttgtttct tagagtgggg atagagatgc 5400 aagggctgct agttccgatg tattggggaa actttcattc attttgcatt tatcatttta 5460 aaagttctgt atgtctataa tggtcatgtg ttgaagaaca caaggaagta ttaaatcact 5520 ccttcttcta aggtttgact agcaagttgg gctagagtta ccaaataaaa tacatgttcc 5580 tagtgaaatc tgaatttcag atacaaaacc ataatttatt gaaaatccaa atttaactgg 5640 gcatcctctg gttttatttg ccacatctgt caaccctaag tgtgacacat ggacatggat 5700 tacagtgcta accatgcaag ccacggtgac agcaacttca cacatgttta tttttaactt 5760 tctctgtaag aaagtgctta gataatttag ggataaaaag atagacattg cttgatccag 5820 ggtgcacacc tctctgccac catttctaaa gggcaaaggg agatttctgc aggtcttgct 5880 cacagtctgg ggagctgctc atttttgtaa agtgtctgta tgagaatgtc attttcttgg 5940 tttcctcctt tccgagggga cttgactaca aaaccaagag ttctgcctct ggccaaggct 6000 ggtaatttga tgcctgctag tattgttggg agtgggagac tgaaagaaat gagttagttg 6060 gggcatttaa cgggaataaa atagctgtgg ttgtgactca ttactacaga taattagtgg 6120 accagtggca gagaaattaa gaaaaaagat gatgtgaatg ataaatgata tgattagtga 6180 ctgcttggta aggcaaggaa atcattaaat cttggttctc atcaagttca ttttctggaa 6240 agatagcact gtattgggag cagaattcta caaaaccttc tttttacata ggaccaagat 6300 tttcaacaaa tatttttcaa tgcaattctc agctgctcca taactaatag tagcttgttc 6360 aacacagatt ttttcagatg attcacacct gtggtactta cccagggatg gttcaccacc 6420 catcccttcc ctctcatcat cgttggggaa cggtgacaat gtttggaaca atttttggtt 6480 gtcacaaaca ggggtttctt ctgatattca atgagtagaa gccagggaca ctgctagaga 6540 acccacaatg ttcagaacag cctctgccat caacaaggaa ttatctggtc caaaatgtca 6600 atagtgctga ggctaagagc actggttcac actgtgctct ttctgaaaat tctagactca 6660 catctgttat acactcacca cacagtttag ttttttattt ttgcttgttt cattataaac 6720 aattagacag ttgcataaat tcaaccactt tcttgttgaa tccatttagt caatgcaagc 6780 tcaatatttt catatttatt ttttgcctta tgcaatattt ttcaacattt tcatgagttg 6840 tcggtcatca ctatctctat taactttcaa caacttgccc ttgtaagtca caaatattga 6900 tgctgctgaa attatttctc actaacatgc ctcagatttc tgtagtgatt ctacatttga 6960 tattattcac aatgtaaaat gcttctattt attcatttcg cttttaccca aggattattt 7020 ttaagttatt tttgtcattt tcacacttca aacataaaga caaaaacatc aaaaatatag 7080 tgttttacat atgtgcatat tttcacacat atatgtatgt atatttatat gtattgaaac 7140 tacagaagca catgtcacca ataagagctc tgagacacct tcgaccactt acccttatca 7200 gatgagttgt ggaaacaagt ttttttaact gaatttctga gctttgtgga tttagaaatg 7260 caaaggaagg tttgtggaca ttcacaggga tcatgatttt attctcctta aaactcttct 7320 gtactttcca attgtcctta gtataaatcc aaaatcctaa caccacccaa gaggcttttc 7380 aatacctggc tcctgtgatt tctccgggct aatcttttac cctccttccc ctcagcctct 7440 ctgctttagt gaactttctc ctagtttttt gaagaagttc atcaattcaa gcttttgtac 7500 atgggatttc ctaaacctga aatgtgcctc ccgttttgtc caaacagaca cgggctccac 7560 tctgccccct ggctcacacc tgcttaacct gtcaagtcac atctgaaccg tcactattaa 7620 gagggtcctt ctctggcacc ctaatgtaat tgagatcatc ctattattct ctgttctaga 7680 actccacact tccgacattt ctcattcctg tctaagctct tgtgtgtttg gtgttgggcc 7740 atcactttca ctgctcttta agctccccca gcggagtgga gaggtctgtt ttccctcgtt 7800 tggattccta gaggcagcgc agaccaggca caaggtcagc actaaggaag ggttcacagg 7860 atgaacgcgg tgggtgctgt ttaaggaacc ggtaaacgtg tgggatgaga gaaggagcag 7920 agtgtctttg gggtggaggc tcccaggagg aggcggcgcg ggctgcggtg cggggcggat 7980 cctcctccag ctcctgcttg gaggtctcca gaacaggctg gaggtaggga ggggggtccc 8040 aaaagcctgg ggatcagacg tggttttccc gcctggtccc ccaggccccc tttcgcctca 8100 ggaagacaga ggaggagccc ctgggctgca ggtggtgggc gttgcggcgg cggccggtta 8160 aggttcccag tgcccgcacc cggcccaggg agccccggat ggcggcgtca ctgtcagtgt 8220 cttctcagga ggccgcctgt gtgactggat cgttcgtgtc cccacagcac gtttcttgga 8280 gtactctacg tctgagtgtc atttcttcaa tgggacggag cgggtgcggt tcctggacag 8340 atacttccat aaccaggagg agaacgtgcg cttcgacagc gacgtggggg agtaccgggc 8400 ggtgacggag ctggggcggc ctgatgccga gtactggaac agccagaagg acatcctgga 8460 agacgagcgg gccgcggtgg acacctactg cagacacaac tacggggttg gtg 8513 // ID KX687267; SV 1; linear; genomic DNA; STD; HUM; 8509 BP. XX AC KX687267; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH25 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*13_03_01e2 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-8509 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-8509 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 89434a51f981dec1f8129cd6cef2fde1. XX FH Key Location/Qualifiers FH FT source 1..8509 FT /organism="Homo sapiens" FT /isolate="IH25" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <173..>8509 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*13_03_01e2" FT mRNA join(<173..272,8263..>8509) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*13_03_01e2" FT /product="MHC class II antigen" FT CDS join(173..272,8263..>8509) FT /codon_start=1 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*13_03_01e2" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G179" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR014745" FT /db_xref="UniProtKB/TrEMBL:A0A223G179" FT /protein_id="AST15781.1" FT /translation="MVCLRLPGGSCMAVLTVTLMVLSSPLALAGDTRPRFLEYSTSECH FT FFNGTERVRFLDRYFYNQEEYVRFDSDVGEYRAVTELGRPSAEYWNSQKDILEDKRAAV FT DTYCRHNYGVG" XX SQ Sequence 8509 BP; 2315 A; 1713 C; 1936 G; 2545 T; 0 other; gctattgaac tcagatgctg attcgttctc caacactaga ttacccaatc caggagcaag 60 gaaatcagta acttactccc tataacttgg aatgtgggtg gaggggttca tagttctccc 120 tgagtgagac ttgcctgctg ctctggcccc tggtcctgtc ctgttctcca gcatggtgtg 180 tctgaggctc cctggaggct cctgcatggc agttctgaca gtgacactga tggtgctgag 240 ctccccactg gctttggctg gggacaccag acgtaagtgc acattgtggg tgctgagcta 300 ctatgcggtg gggaaaatag ggagttttgt taacattgtg cccaggccat gtaccttaag 360 aaattgtgac gtatttttca gagattgccc atctttatca tatggatccc aaataatttc 420 cccaccacaa aaggagcttg gctacttgcc cactccatga gacttgtgta aggggcctcc 480 atacaggtca tttctactca aatctccacc aataaaacct ttgcatcaca tgtcctcagg 540 gtctttagag gatttagaaa taaggatgct aaaataaatt ccccatacag cacttgcctt 600 tattatgttg acttaagtca gacaaaagga ggttttttct gaaaattttg tggaagtcaa 660 gggaatttaa agggtctctc ctaaacgatc ctgggttatg tcacccacag gacctttggt 720 gttggcccct cttcctcata tgtgaggatg gacccagtgg cctccccatt atctactttc 780 ttttctttct gaactccaat gtttataaag cctgtacccc tgtagtgtat gtaggttgtc 840 tgacagaagt tatacttagt gctctttctt tcttgtgggg aaaaatccct ggaactgaag 900 ctgagatctt tagtacttgg agtcacctta cagatacaga gcatttatga ggtattcttt 960 ggtgcctaaa gaacttaagg catcctctga aaacctggcc caggttagtg tttattatga 1020 atctctttta acctttctat acttgtttct cctacgtctc ctaagtgctc caactagaca 1080 tgacagaaga gatttaacta acgtagtatg ggttatataa aattctattt ttgtaagtca 1140 aaaataatca aatatcagaa atttaataat gttcaaacta tatactctgt gtggggttac 1200 cgagacaatg tggacattat tcacatctca tagggctgaa agtcaatggg caagtcctgg 1260 gaactcattg tcttactggg gtcttgtcct aaatttcata ggttcaccca tcatgccctc 1320 aactttcctt aattagccat gtctgcttac ctcttcctcc agtttctctc ttatttttcc 1380 ccagctatgt tgttatcatt tccagaaatc tctaaagctt gcacagatcc ttagcactat 1440 gagatccatt gaaagagata gtttttttct ttttgagata gggcctggct ctgtcaccca 1500 ggctgtagct cagtggtgcg atcgaggctc actgcaacct ctgcctccca cgctcaagtg 1560 atcctccctc ctcaggctcc agagtagctg ggaatacagg caggcaacca cgcccagcta 1620 atttttgtaa ttttggtaga aatgagattt tgccatgttg cccaggctgg tcttaaactg 1680 ctggactcaa gcaatcctcc tgacttggcc tcccaacatg ctaggattat agatgtgagc 1740 cactgtgccc aggcaaaaag agatgactct caataaaaaa aaagtccttt ttcttaaatc 1800 actgtttctt tatctgtgaa ttcttcttcc aactagaagg aggagaaaga agtttgcctg 1860 tatttctcac caggaggaga aggggtctag tgtgacatca gaatgaaaga gtgctggagt 1920 ttgagcccct tcttgctttc caagatcccc acagttatca cttcccatac cctggtttat 1980 tcatgtaaac cacacttatt tttcttagca gctactgtgt actcagctcc attctaggtt 2040 cagatcattc tattttatta agacagagag ggtcccgact ctcatggaag ttacacaaca 2100 atagaggaga cagacactaa cccaataagc atttaacaaa gaataaaata ttagagagtc 2160 atagtgcact gaagaaaaga catcaggttt gtgaagaaga gagacatgga ttcacctact 2220 ttagttcata tgtttaggga gctctacctg agaaagtgac attcagctga gacaacaaaa 2280 taagtagaca gtcatgaaga tctaatggac gaaagctcca gagagaccaa atgggggtaa 2340 agccctggtg tgggaaatta tgtggagaga gagaaagaag gctagagggg ctgatgtata 2400 gaaagtaagg aaatggagag gcagaagatg aggtaggaca cagagagaaa gtcaggagcc 2460 tcatcattat aggctctgat gtccacggta aaaaatttga attttatttt atttatttat 2520 ttattttatt ttatttattt atttatttat ttattttttg agatggagtc tcgctttgtt 2580 gcccaggctg gagtgcagtg gcgtgatctc agctcactgc aagctccacc tcctgggttc 2640 atgccattct cctgcctcag cctccctagt agctgggact acaggcacct gccaccacgc 2700 ctggctaatt tttagtattt ttagtagtga gggcatttcg tcatgttagc cagggtggtc 2760 tccatctcct gacctcgtga tccacctgcc tcagcctccc aaagtgctga gactacaggt 2820 gtgagccacc acgcctggcc tatttttttt tttttgagac ggagtttcgt tcttgttgcc 2880 caggctggag tgcaatggtg caatctcggc tcactgcaac cttcgcctcc ctggttcaag 2940 tgattctcct gcctcagctt cccaagtatc tgagattaca ggcacccacc accatacctg 3000 gctaattttt atttttttgt atttttagta gacatggggt atcaccatgt tgaccatgct 3060 ggtctcgaac tcctgacctc agataatctg tctgccttgg cctcccaaag tgctgggatt 3120 acaggcatga gccaccgcgg ccggactgaa ttttatttaa atagatacga gaagctactg 3180 tatggttaca aggagagtca atttatattc aatttatttt tattttattt tatttttttg 3240 gtgatggggt cttgctctgt tgcccaggct agattgtagt ggcacaatct cggctcactg 3300 caacctctgc cttctgggtt caggcgattc tcctgactca gcctccagag tagctgggac 3360 cacaggtaca tgccaccaca cctggctaag tttttgtatt ttttagtaga gacaggattt 3420 caccatgtta gccaggatgg tctcgatctc ctgacctcgt gatccaccca ccttggcctc 3480 ccaaagtgca gggattacag gcctgagcca ctgcgcccgg cctatattca atttttaaaa 3540 ctaattctag ctactctgtg gggattggaa tgttggggtt cacaagtggt caggaagact 3600 atttaggagc acagcaggga attctccagc gaaaacaggc ttgtggcttc atggagtgca 3660 ttagtgataa agacggtgaa aaagataaag tggacagact tggcatgtat ttttccttag 3720 cttgttaatg aattactgta aagggggtag aacaatcaag cttattccta aggattttgt 3780 tttgacaaat aagtgggtgg tagtgttgtt tattgagata ggaaaaacta tgggaggaaa 3840 ttatttgaag tgggtggttg gaaataaaag ttttgtttaa atttgagatg atttattgac 3900 atttatgtgg agcaatcaga aggtcaatgg catttaagag actcatggtg aggctagggc 3960 ttcaagtatt tatgttggcg gcatcaatac gtgtagtgtg ttaaattcca gggagtggaa 4020 gaggatacat agggagatgg attgtgtgga gaaaaaagaa cagggcacag gccagcaaag 4080 ggggctgaga aagagcccag ggatgctgga gaaaaatcaa gagaacatga tgcatgtaag 4140 tcaaggaaaa tagatttttt tcaaggagaa gggagaggcc aatggtggtg agtaccacta 4200 agcggagggg gaagtgagaa cgtgacagag aagcaagtgc tgagtttggt ggagttgata 4260 tttgcagtca gtggagtatc cagggaggaa actggattgg acaatttgaa gagcgagtag 4320 aagtgaggat gaggttaagg ttgactgttt tgagtagaga gcttcaggga aggactgcac 4380 tctgggttca gggagccagc tggatcaaaa ggaaaaggct aaagaggctg aagagaagca 4440 ggaggacctg tgaaccagag atgctcagtc attattagcg aggaaatact agaaagcccc 4500 tgtgtgcagt gatgactact catgcagaag gtcacacagt caatatttaa cacagccagt 4560 atttcacaca gctaatattt attagtgaca tagaatatac cagttattac tctaggtcat 4620 gagaatggag tgataaataa aatgaatccg gtcgccatca gtatatgcca tgtaacattt 4680 tgcagtgact gtgtaccagg cctgtgaatt tcagtatgca atttcaataa tgatcctgct 4740 gtatctgtgg tgtttaaaaa catatacatc tctggaatct aaaattgaga ggttataagt 4800 aaaacccagt attacaaatt gagtgctgga aatcagattg cagtttaaat ctgagcatat 4860 agaaagtccc tttcttctat gtcagcagat gccttttgtg tgaggtttag ctggactgca 4920 ttattagaca taaaccagtg tttctgccct atgttttcag aatgacaatt ctttatgaaa 4980 ctcatagaag aacagaagac aactgcaaaa tcatgatgaa gatagtaatt gctttagaat 5040 taaggaatac aaaaaataat gtgagctgta gttataggga tcataaaagt ttaaatggga 5100 atgtatttga gtatgtgatc agtgctaaga agagtcatca tttaatttta cacttaacag 5160 taatctcgtg aggattacgc tattattaaa tgcatttgat agattacaaa aaggcttatg 5220 gttggtaaaa attgacccaa gtagaagaga tcatgttttt attcaggttt tctgattcta 5280 gagtttgaga gtttgtccat cattagtgag tagtgactat attgtgtctg aattattgac 5340 agaatttctg atattcatat gtaccaggtt gtttcttaga gtggggatag agatgcaagg 5400 gctgctagtt ccgatgtatt ggggaaactt tcattcattt tgcatttatc attttaaagt 5460 tctgtatgtc tataatggtc atgtgttgaa gaacacaagg aagtattaaa tcactccttc 5520 ttctaaggtt tgactagcaa gttgggctag agttaccaaa taaaatacat gttcctagtg 5580 aaatctgaat ttcagataca aaaccataat ttattgaaaa tccaaattta actgggcatc 5640 ctctggtttt atttgccaca tctgtcaacc ctaagtgtga cacatggaca tggattacag 5700 tgctaaccat gcaagccacg gtgacagcaa cttcacacat gtttattttt aactttctct 5760 gtaagaaagt gcttagataa tttagggata aaaagataga cattgcttga tccagggtgc 5820 acacctctct gccaccattt ctaaagggca aagggagatt tctgcaggtc ttgctcacag 5880 tctggggagc tgctcatttt tgtaaagtgt ctgtatgaga atgtcatttt cttggtttcc 5940 tcctttccga ggggacttga ctacaaaacc aagagttctg cctctggcca aggctggtaa 6000 tttgatgcct gctagtattg ttgggagtgg gagactgaaa gaaatgagtt agttggggca 6060 tttaacggga ataaaatagc tgtggttgtg actcattact acagataatt agtggaccag 6120 tggcagagaa attaagaaaa aagatgatgt gaatgataaa tgatatgatt agtgactgct 6180 tggtaaggca aggaaatcat taaatcttgg ttctcatcaa gttcattttc tggaaagata 6240 gcactgtatt gggagcagaa ttctacaaaa ccttcttttt acataggacc aagattttca 6300 acaaatattt ttcaatgcaa ttctcagctg ctccataact aatagtagct tgttcaacac 6360 agattttttc agatgattca cacctgtggt acttacccag ggatggttca ccacccctcc 6420 cttccctctc atcatcgttg gggaacggtg acaatgtttg gaacaatttt tggttgtcac 6480 aaacaggggt ttcttctgat attcaatgag tagaagccag ggacactgct agagaaccca 6540 caatgttcag aacagcctct gccatcaaca aggaattatc tggtccaaaa tgtcaatagt 6600 gctgaggcta agagcactgg ttcacactgt gctctttctg aaaattctag actcacatct 6660 gttatacact caccacacag tttagtcttt tatttttgct tgtttcatta taaacaatta 6720 gacagttgta taaattcaac cactttcttg ttgaatccat ttagtcaatg caagctcaat 6780 attttcatat ttattttttg ccttatgcaa tatttttcaa cattttcatg agttgtcggt 6840 catcactatc tctattaact ttcaacagct tgcccttgta agtcacaaat agtgctgctg 6900 ctgaaattat ttctcactaa catgcctcag atttctgtag tgattctaca tttgatatta 6960 ttcacaatgt aaaatgcttc tatttattca tttcgctttt acccaaggat tatttttaag 7020 ttatttttgt cattttcaca cttcaaacat aaagacaaaa acatcaaaaa tatagtgttt 7080 tacatatgtg catattttca cacatatatg tatgtatatt tatatgtatt gaaactacag 7140 aagcacatgt caccaataag agctctgaga caccttcgac cacttaccct tatcagatga 7200 gttgtggaaa caagtttttt taactgaatt tctgagcttt gtggatttag aaatgcaaag 7260 gaaggtttgt ggacattcac agggatcatg attttattct ccttaaaact cttctgtact 7320 ttccaattgt ccttagtata aatccaaaat cctaacacca cccaagaggc ttttcaatac 7380 ctggctcctg tgatttctcc tgtctaatct tttaccctcc ttcccctcag cctctctgct 7440 ttagtgaact ttctcctagt tttttgaaga agttcatcaa ttcaagcttt tgtacatggg 7500 atttcctaaa cctgaaatgt gcctcccgtt ttgtccaaac agacacgggc tccactctgc 7560 cccctggctc acacctgctt aacctgtcaa gtcacatctg aaccgtcact attaagaggg 7620 tccttctctg gcaccctaat gtaattgaga tcatcctatt attctctgtt ctagaactcc 7680 acacttccga catttctcat tcctgtctaa gctcttgtgt gtttggtgtt gggccatcac 7740 tttcactgct ctttaagctc ccccagcgga gtggagaggt ctgttttccc tcgtttggat 7800 tcctagaggc agcgcagacc aggcacaagg tcagcactaa ggaagggttc acaggatgaa 7860 cgcggtgggt gctgtttaag gaaccggtaa acgtgtggga tgagagaagg agcagagtgt 7920 ctttggggtg gaggctccca ggaggaggcg gcgcgggctg cggtgcgggg cggatcctcc 7980 tccagctcct gcttggaggt ctccagaaca ggctggaggt agggaggggg gtcccaaaag 8040 cctggggatc agacgtggtt ttcccgcctg gtcccccagg ccccctttcg cctcaggaag 8100 acagaggagg agcccctggg ctgcaggtgg tgggcgttgc ggcgggggcc ggttaaggtt 8160 cccagtgccc gcacccggcc cagggagccc cggatggcgg cgtcactgtc agtgtcttct 8220 caggaggccg cctgtgtgac tggatcgttc gtgtccccac agcacgtttc ttggagtact 8280 ctacgtctga gtgtcatttc ttcaatggga cggagcgggt gcggttcctg gacagatact 8340 tctataacca agaggagtac gtgcgcttcg acagcgacgt gggggagtac cgggcggtga 8400 cggagctggg gcggcctagc gccgagtact ggaacagcca gaaggacatc ctggaagaca 8460 agcgggccgc ggtggacacc tactgcagac acaactacgg ggttggtga 8509 // ID KX687268; SV 1; linear; genomic DNA; STD; HUM; 5124 BP. XX AC KX687268; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate S1 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*03_15x1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5124 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-5124 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; c577f42710b30eda1cfeea6f0875ffad. DR IMGT/HLA; HLA-DRB1*03:15:02; HLA15079. XX FH Key Location/Qualifiers FH FT source 1..5124 FT /organism="Homo sapiens" FT /isolate="S1" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <244..>4337 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*03_15x1" FT mRNA join(<244..513,2748..3029,3728..3838,4314..>4337) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*03_15x1" FT /product="MHC class II antigen" FT CDS join(<244..513,2748..3029,3728..3838,4314..>4337) FT /codon_start=3 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*03_15x1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G188" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G188" FT /protein_id="AST15782.1" FT /translation="RFLEYSTSECHFFNGTERVRYLDRYFHNQEENVRFDSDVGEFRAV FT TELGRPDAEYWNSQKDLLEQKRGRVDTYCRHNYGVVESFTVQRRVHPKVTVYPSKTQPL FT QHHNLLVCSVSGFYPGSIEVRWFRNGQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSVTSPLTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGH FT SGLQPR" XX SQ Sequence 5124 BP; 1275 A; 1056 C; 1275 G; 1518 T; 0 other; tagggagggg ggtcccaaaa gcctggggat cagacgtggt tttcccgcct ggtcccccag 60 gccccctttc gcctcaggaa gacagaggag gagcccctgg gctgctggtg gtgggcgttg 120 cggcgggggc cggttaaggt tcccagtgcc cgcaccccac ccagggagcc ccggatggcg 180 gcgtcactgt cagtgtcttc tcaggaggcc gcctgtgtga ctggatcgtt cgtgtcccca 240 cagcacgttt cttggagtac tctacgtctg agtgtcattt cttcaatggg acggagcggg 300 tgcggtacct ggacagatac ttccataacc aggaggagaa cgtgcgcttc gacagcgacg 360 tgggggagtt ccgggcggtg acggagctgg ggcggcctga tgccgagtac tggaacagcc 420 agaaggacct cctggagcag aagcggggcc gggtggacac ctattgcaga cacaactacg 480 gggttgtgga gagcttcaca gtgcagcggc gaggtgagcg cggcgcgggg cggggcctga 540 gtccctgtga gctgggaatc tgagtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg 600 tgagagagag agacagagag acagagagag agagcgccat ctgtgagcat ttagaatcct 660 ctctatcctg agcaaggagt tctgagggca caggtgtgtg tgtagagtgt ggatttgtct 720 gtgtctgtga ggctgttgtg ggaggggagg caggaggggg ctgcttctta ttcttggagg 780 actctgtggg gaggtgacaa gggaggtggg tgcgggcggc tggagagaga ggtgaccttg 840 attgtctcgg gtccttagag atgcagggaa gggaaatgta aggggtgtgt ggttggggtg 900 aaggtttagg ggaggagagc tgaggggtaa ggaaggtttg ggataatgtg aggaggccag 960 ttccagactg tccctggcac acacccttca tgtaatctct gaaataaaag tgtgtgctgt 1020 ttgtttgtaa aagcattaga ttaatttcta ggggaattga ggagacctct gaggcatctc 1080 tgaagcttct ttaggtctaa atttcttgct agttttttgt tttttattgt gtatattttt 1140 acatagtaga aatgactgtg aaactaactt tttgaattaa agttttaaca cagttactat 1200 tttattataa tgctaatagt tttctagtag ttacatatta ttcttttata tataatagtt 1260 gtgacacaac ttacctcact ttccactttg ttgaccttta ttatgacatt caccaaaatt 1320 tgaaaatgta tgtttctggt taatttttaa tttatatttt tttcatttat aattcttttg 1380 aattattttg acctatttat tggccagttt taataactgc tgtaagaatt ccctattgta 1440 tttggtaggg aatggacaat gatctactgc ctaatatctc gagggcttag tatttttctc 1500 agtgactttg tgggttcttt gtactgtgag attattaaca ctttattgat atttgattca 1560 gcatttgctc cagtttgtgg tttgtatgtt gattttgaaa attcttttcc atgttaagaa 1620 tttgaacatt tttatataat aaaatatgtt gcaaaatttt tattaatgat ttacaatcca 1680 tcttaaatct gccattttgt ggtattgttg tctccaggtt tctccttact tctaaaaaaa 1740 attgcattta ttgagagtct gctagtgtta gggattttcc tgggcataag caccccaagt 1800 gacgagtccc agacactgcc ttaatccaaa tgtgattctg gaaagaaaaa tcattttaca 1860 atgataggcc taataataat taagcttgtg ttgcatggga gatgcattga tcagctaaat 1920 gtaaatataa gaactttcaa aactaaaatg acgttcctta atccttctct ctgctttatg 1980 actcatgctt ttctgggaaa gtaaaaattt ggagaatcat ttctgtctgt cccaccttcc 2040 caggggcaga accatttctg tggtgttcta aggtgtgagt gcatggcggt agtattccta 2100 aaaattcata ttcggtttcg tcatgtaccc aactctgtcc cgttatctat caacattgtt 2160 ttaaatcata tatttctgtc aaggtgtaca aggatgataa ataggtgcca agtggagcac 2220 ccaagtgtga tgagccccct cacagtggaa tggagtgtga agctttatga cctcataaat 2280 tgaaggttat cttcaggcat tgttttatat attttacatg cattaatcct catataatcc 2340 caagaggtaa attagtataa ttatccttca ttataggtga caaagttgag acacagaaga 2400 atcaaactct taaggcagac cttggatttg aaccaggcaa cctggctcag atatcagttt 2460 taattactac actctgtact ttcaaagatt tgtaaacact ttgacaatgc atgacaattt 2520 caagctatga agaaacaaac acaatttttc acaatatctc tcaaatctaa taggtcctca 2580 ctatcaagat taagttccag gctgatgaca ctgtaaggcc acatggccag ctgtgctgga 2640 ggcctggtca aggtcagagc ctgggtttgc agagaagcag acaaacagcc aaacaaggag 2700 acttactctg tcttcatgac tcattccctc tacctttttt ctcctagtcc atcctaaggt 2760 gactgtgtat ccttcaaaga cccagcccct gcagcaccat aacctcctgg tctgttctgt 2820 gagtggtttc tatccaggca gcattgaagt caggtggttc cggaatggcc aggaagagaa 2880 gactggggtg gtgtccacag gcctgatcca caatggagac tggaccttcc agaccctggt 2940 gatgctggaa acagttcctc ggagtggaga ggtttacacc tgccaagtgg agcacccaag 3000 cgtgacaagc cctctcacag tggaatggag tgagcagctt tctgacttca taaatttctc 3060 acccaccaag aaggggactg tgctcatccc tgagtgtcag gtttctcctc tccgacatcc 3120 tattttcatt tgctccatgt tctcatctcc atcagcacag gtcactgggg gtagccctgt 3180 aggtgtttct agaaacacct gtacctcctg gagaagcagt ctcgcctgcc aggcaggaga 3240 ggctgtccct cttttgaacc tccccatgat gtcacaggtc agggtcaccc accctccccg 3300 ggctccaggc actgcctctg ggtctgagac tgagtttctg gtgctgttga tctgagttat 3360 ttgttgtgat ctgggaagag gagaagtgta ggggccttcc tgacatgagg ggagtccaat 3420 ctcagctctg ccttttatta gctctgtcac tctagacaaa ctacttagcc tcattgagtc 3480 tcaggctttc tgtggatcag atgttgaact cttgccttac atcaaggctg taatatttga 3540 atgagtttga tgtctgaacc ttgtaactgt tcagtgtgat ttgaaatcct ttttttctcc 3600 agaaatggct agttatttta gttcttgtgg gtcagacttc ttccccattt tcaaagctct 3660 gaatcttaga gtctcaatta aagaggttca atttggaata aacactaaac ctggcttcct 3720 ctctcaggag cacggtctga atctgcacag agcaagatgc tgagtggagt cgggggcttt 3780 gtgctgggcc tgctcttcct tggggccggg ctgttcatct acttcaggaa tcagaaaggt 3840 gaggagcctt tggtagctgg ctctctccat aggcttttct ggaggaggaa ctatggcttt 3900 gctgaggtta gttctcagta tatgagtggc cctgaataaa gcctttcttt ccccaaacgg 3960 ctctaatgtc ctgctaatcc agaaatcatc agtgcatggt tactatgtga aagcataata 4020 gcttgtggcc tgcagagaca agaggaaggt taacaagtag gggtcctttg gtttgagatc 4080 ttggagcaga ttaaggaaga gccactaaga ctaatggaat tacactggat cctgtgacag 4140 acactttacc cttcatgggt cacatggtct gtttctgctc ctctctgccc tggctggtgt 4200 gggttgtagt gacagagaac tctccggtgg gagatctggg gctgggacat tgtgttggaa 4260 gacagatttg cttccataaa ttttaagtgt atatattttc ctctttttcc caggacactc 4320 tggacttcag ccaagaggta atacctttta atcctctttt agaaacagat acggtttccc 4380 tagtgagagg tgaagccagc tggacttctg ggtcgggtag ggacttgcag aactttcctg 4440 tcttaggaga ggtttctaaa tgcaccaatc agtgctctgt aaaaacacac caattggcac 4500 tctgtggcta gatagatgtt tgtaaaatgg actaatcagc actctgtaaa atggagcaat 4560 ccacactctg taaaatggac caatcaatgc tctttaaaat ggaccaatca gcaggacatg 4620 ggcggggaca aataagggaa tacaagctgg ccaccccagc cagcagcagc aacccgctca 4680 ggtcgccttc catgctgtgg aagctttgtt cttttgctct tcacaataaa tcttgctgtt 4740 gctcactctt cgggtctgtg ccacctttaa gagctgtaac actcactgtg aagattcgcg 4800 gcttcattct tgaagtcagc gaaaccacga acccaccgga aggaacaaac tctggacaca 4860 ctagaattga tggtagaggt gataaggcat gagacagaaa taataggaaa gactttggat 4920 ccaaatttct gatcaggcaa tttacaccaa aactcctcct ctccacttag aaaaggcctg 4980 tgctctgtgg gactattggc tctgggagac tcaggaactt gtttttcttc ttcctgcagt 5040 gctctcatct gagtccctga aagagaggaa aagaaactgt tagtagagtc aggttgaaaa 5100 caacactctc ctctgtcttt tgca 5124 // ID KX687269; SV 1; linear; genomic DNA; STD; HUM; 6134 BP. XX AC KX687269; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate CL10 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*04_02_01e1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-6134 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-6134 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 3207c004508cd1c2ab28c7a805d6ac15. DR IMGT/HLA; HLA-DRB1*04:02:01; HLA00687. XX FH Key Location/Qualifiers FH FT source 1..6134 FT /organism="Homo sapiens" FT /isolate="CL10" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <187..>5507 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*04_02_01e1" FT mRNA join(<187..456,3922..4203,4901..5011,5484..>5507) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*04_02_01e1" FT /product="MHC class II antigen" FT CDS join(<187..456,3922..4203,4901..5011,5484..>5507) FT /codon_start=3 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*04_02_01e1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1C2" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1C2" FT /protein_id="AST15783.1" FT /translation="RFLEQVKHECHFFNGTERVRFLDRYFYHQEEYVRFDSDVGEYRAV FT TELGRPDAEYWNSQKDILEDERAAVDTYCRHNYGVVESFTVQRRVYPEVTVYPAKTQPL FT QHHNLLVCSVNGFYPGSIEVRWFRNGQEEKTGVVSTGLIQNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSLTSPLTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGH FT SGLQPT" XX SQ Sequence 6134 BP; 1520 A; 1263 C; 1446 G; 1905 T; 0 other; cagggagggg gtcccaaaag ccttgggatc agaggtagtt tttccacctg gtcccccaga 60 cccccgtccg cctcagaaag acagaggatg agcccctggg ctgcgtgttg tcggggttgc 120 gggtggggcc agatagtgtc ttccccggag gccgcttctg taaccggatc gttcttgtcc 180 ccccagcacg tttcttggag caggttaaac atgagtgtca tttcttcaac gggacggagc 240 gggtgcggtt cctggacaga tacttctatc accaagagga gtacgtgcgc ttcgacagcg 300 acgtggggga gtaccgggcg gtgacggagc tggggcggcc tgatgccgag tactggaaca 360 gccagaagga catcctggaa gacgagcggg ccgcggtgga cacctactgc agacacaact 420 acggggttgt ggagagcttc acagtgcagc ggcgaggtga gcgcggcgcg gggcggggcc 480 tgagtccctg tgagcggaga gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt 540 gtgtgtgtgt gagagagaga gagagagaga gagagagaga gagagagaga gcgccatctg 600 tgagcattta gaatcctctc tatcctgagc aaggagttct gcgggcacag gtgtgtgtgt 660 agagtgtgga tttgtccgtg tctgtgaggc tgttgtggga ggggaggcag gagggggctg 720 cttcttattc ttggagactt ctgtggggag gtgacaaggg aggtgggtgc tgggggctgg 780 agagagaggc gaccttgatt gtctcgggtc cttagagatg caaggaaggg aaatgtatgg 840 ggtgtgtggt tggggtgaag gtttagggga ggagagctga ggggtaagga aggtttggga 900 taatgtgaag aggccagttt cagactgtcc ctggcacaca cccttcatgt aatctctgaa 960 ataaaagtgt gtgctgttta tttgtaaaag cattagatta acttctaggg gaattgagta 1020 gacctctgag gcacctctga agcttcttta ggtataaatt tcttgctagt tttttgtttt 1080 cttagtgtta tatttttaca tagttgaaat gactgtgaaa ctaacttttt gaattaaagt 1140 ttgagaacac tgttactatt ttattataat gctaataatt tcatagttac tttttaaata 1200 tataatagtt gtgacacaaa ttacctcact ttctttgttt tttttttttc ttacacttta 1260 agttttaggg tacatgtgca caacgtgcag gtttgttaca tatgtataca tgtgccatgt 1320 tggtgtgctg cacccattaa ctcgtcattt aacattaggt atatctccta atgctatccc 1380 tccccacccc cccaccccac aacaggcccc agtgtgtgat gttccccttc ctgtgtccat 1440 gtgttctcac tgttcaattc ccacctatga gtgagaacat gcggtgttcg gttttttgtc 1500 cttgccatag tttgctgaga atgatggttt ccagcttcat ccatgtccct acaaaggaca 1560 tgaactcatt cttttttgtg gctgcatagt attccatagt gtatatgtgc cacattttct 1620 taatccagtc tatcattgtt ggacatttgg gttggttcca agtctttgct attgtgaata 1680 gtgccgcaat aaacatacat gtgcatatgt ctttatagca gcatgattta taatccttgg 1740 gttatatacc cagtaatggg atggctgggt caaatggtat ttctagttct agatccctga 1800 ggaatcgcca cactgacttc cacaatggtt gaactagttt agagtcccac caacagggta 1860 aaagtgttcc tatttctcca catcctctcc agcacctgtt gcttcctgac tttttaatga 1920 tcgccattct aactggtgtg agatggtatc tcattgtggt tttgatttgc aattctctga 1980 tggccagtga tgatgagcat tttttcatgt gtcttttggc tgcataaatg tcttcttttg 2040 agaagtgtct gttcatgtcc tttgcccact ttttgatggg gtattttgtt tttttcttgt 2100 aaatttgttt gagttcattg cagattctgg atattagccc tttgtcatat gagtagattg 2160 caaaaatttt ctcccattct gtaggttgcc tcttcactct gatggtagtt tcttttgctg 2220 tgcagaagct ctttagttta attagatccc atttgtccat tttggctttt gttgccattg 2280 cttttggtgt tttagacatg aagttcttgc ccatgcctat gtcctgaatg gtattgccta 2340 ggttttcttc tagggttttt atggtttcag gtctaacatt taagtcttta atccatcttg 2400 aattaatttt tgtataagca aattacgtca ctttccccat tgatgacctt tattatgaca 2460 ttcaccaata gttgaaaatg tatgtttctg gttaattttt gatttatatt tttttgattt 2520 gtaattattt tgaattattt tgacctattt attggccagt tgtaattact gctctgctct 2580 acgaattacc tgttgtattt ggtaggtaat ggacaatgat ctattgtctc ttatctttag 2640 ggcttagtat ttttctcagt gactttgtgg gtttgttgta ctgtaagatt attaacactt 2700 tattgatatt tgattcagta ttttctccag tttgtggtat gtatattttg aaaattcttt 2760 tccatgttaa gaatttgaac atttttattt aataaaatat attgcaaaat gttaattaat 2820 gattcacaaa ctagctcaag tctaccattt tgtggtattg atgtctccag gtttctcctt 2880 ccttcttaaa aaaaaatgta tttattgaga gtatgctagt gtcagggatt tccctaggca 2940 taagcactcc aagtaatgag tcccagacac tgccttgatc caaatgtcat tctggaaaga 3000 aaaatcattt tacagtgata agcctaataa tagttatact tgttttgcct gggagatgca 3060 ttgatcagct aaatgtaaat ataagaactt tcaaaactaa aatgacgttc cttaatcttt 3120 ctctctgctt taggaatcat gctttcttag gaacttaaag atttggagaa tcatttctgt 3180 ctgtcccacc ttcccaggag cataaccatt tctgtggtgt tctaaggtgt gagtgcatgg 3240 cagtagtatt cctaaaaatc catattcagt ttcctcatgt gccctactcc gtccctttct 3300 ctatccacat tgctttaaat catatttttc tctcaaggtg tacaaggatg ataaataggt 3360 gccaagtgga gaacccaagt gtgacgagcc ctctcacagt agaatggagt gagaagcttt 3420 ctgacctcat aaattgaagg ctatcgtaat tcattctttt atatatttta cttgcattaa 3480 tcctcatata acctcaagag gtaaattaat ataattatcc tccattattg gagagaaagt 3540 tgagacacaa aagaatcaaa aactcttcca ggatcaacca gtaaaaggca gaccttggat 3600 ttgaaccagg caacctggct cagaagtcag ttttaattac cacactctgt actttcaaag 3660 atttgtaaac gctttgacaa tgcatgtcaa tttcaagcta tgaagagcca aacataattt 3720 ttcacaatat ctctcaaatc taatgggtcc ccactataaa gattaaattc caggctgatg 3780 acactgtgag gccacatggc cagctgtgct ggaggcctgc tcaaggccag agcctaggtt 3840 tacagagaag cagacaaaaa gctaaacaag gagacttact ctgtctgcat gacttattcc 3900 ctctaccttg ttttctccta gtctatcctg aggtgactgt gtatcctgca aagacccagc 3960 ccctgcagca ccacaacctc ctggtctgct ctgtgaatgg tttctatcca ggcagcattg 4020 aagtcaggtg gttccggaac ggccaggaag agaagactgg ggtggtgtcc acaggcctga 4080 tccagaatgg agactggacc ttccagaccc tggtgatgct ggaaacagtt cctcggagtg 4140 gagaggttta cacctgccaa gtggagcacc caagcctgac gagccctctc acagtggaat 4200 ggagtgagca gctttctgac ttcataaatt tctcacccac caagacgcga actttactaa 4260 tccctgagta tcaggcttct cctatcccac atcctatttt catttgctcc acgttctcat 4320 ctccatcagc acaggtcact ggggggtagc cctgtaatac tttctagaaa cacctgtacc 4380 ccctggggaa gcagtcatgc ctgccaggca ggagaggctg tccctctttt gaacctcccc 4440 atgatgtcac aagtcggggt cacctgctgt ctgtgggctc caggccctgc ctctgggtct 4500 gagactgagt ttctggtact gttgctctga gtcgtttgtt gtaatctgag aagaggagaa 4560 gtatagggac cttcctgaca tgaggggagt ccaatctcag ctccgccttt tattagatct 4620 gtcactctag gcaactactt aacctcattg ggtctcaggc tttctgttca tcagatgttg 4680 aagtcctgtc ttacatcaag gctgtaatat ttgaatgagt ttgatgactg aaccttgtaa 4740 ctgttcagtg tgatttgaaa acctttctca agaaatggtc agttatttta gttcttgcag 4800 agcagccttc tttctcattt tcaaagctct gaatctcaag gtgtcaatta aagaggttcc 4860 atttgggata aaaatcacta aacctggctt cctctctcag gagcacggtc tgaatctgca 4920 cagagcaaga tgctgagtgg agtcgggggc ttcgtgctgg gcctgctctt ccttggggcc 4980 gggctgttca tctacttcag gaatcagaaa ggtgaggagc ctttggtagc tggctgtctc 5040 catacgcttt tctggaggag gaactatggc tttgctgaag ttggttctca gcatatgaat 5100 ggccctggat aaagcctctc tactcccaaa tgacctccaa tgttctgcaa atccagaaat 5160 catcagtgca tggttgctat gtcaaagcat aatagcttgt ggcctacaga gataacagaa 5220 agattaacag gtataggtgc tttggttgag atcgtggagc aaattaagga agagcaacta 5280 aagctaatac aattacactg gatcctgtga cagacacttc acacttcatg ggtcacatgg 5340 tctgtttctg ctcctctctg ccctggctgg tgtgggttgt ggtgtcagag aactctcagg 5400 tgggagatct ggagctggga cattgtgttg gaggacagat ttgcttccat atcctttaag 5460 tgtatatctt ctctttttcc taggacactc tggacttcag ccaacaggta ataccttttc 5520 atcctcttta agaaacagat ttggaggcca ggcgcagtgg ctcacgcctg taatcccagc 5580 actttgggag gccgaggcgg gcgaatcatg aggtcaggag ttcgagacca gcctgaccaa 5640 cgtggtgaaa ccccgtctct actaaaaata caaaaaaaaa tcagtcgggc gtggtggtgt 5700 gcgcctgtaa tcccagctac tcaggaggcc aaggcaggag aatcgctgga acccgggagg 5760 cagaggttgc agtgagccga gattgggcca ctgcactcca gcctaggtga cagagtgaga 5820 ccccatctca aaaaaacaaa aaaaagaaag aaagaaacag atttcctttc cctagaatga 5880 tggtagaggt aataaggcat gagacagaag taatagcaaa gacattggat ccaaatttct 5940 gatcaggcaa tttacaccag aactcctcct ctccacttag aaaaggcctg tgctctgcag 6000 gagtattgac tcatggagac ttcagaactt gtttttcttc ttcctgcagt gctctcatct 6060 gagtccttga aagagggcaa aataaactgt tagtagagcc aggtctgaaa acaacacttt 6120 cttgcgtctc tgca 6134 // ID KX687270; SV 1; linear; genomic DNA; STD; HUM; 6137 BP. XX AC KX687270; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate DL6 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*04_04_01e1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-6137 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-6137 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; f15db397c79c627167ba9a8bf9506497. XX FH Key Location/Qualifiers FH FT source 1..6137 FT /organism="Homo sapiens" FT /isolate="DL6" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <187..>5510 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*04_04_01e1" FT mRNA join(<187..456,3925..4206,4904..5014,5487..>5510) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*04_04_01e1" FT /product="MHC class II antigen" FT CDS join(<187..456,3925..4206,4904..5014,5487..>5510) FT /codon_start=3 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*04_04_01e1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G195" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G195" FT /protein_id="AST15784.1" FT /translation="RFLEQVKHECHFFNGTERVRFLDRYFYHQEEYVRFDSDVGEYRAV FT TELGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVVESFTVQRRVYPEVTVYPAKTQPL FT QHHNLLVCSVNGFYPGSIEVRWFRNGQEEKTGVVSTGLIQNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSLTSPLTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGH FT SGLQPT" XX SQ Sequence 6137 BP; 1520 A; 1265 C; 1447 G; 1905 T; 0 other; cagggagggg gtcccaaaag ccttgggatc agaggtagtt tttccacctg gtcccccaga 60 cccccgtccg cctcagaaag acagaggatg agcccctggg ctgcgtgttg tcggggttgc 120 gggtggggcc agatagtgtc ttccccggag gccgcttctg taaccggatc gttcttgtcc 180 ccccagcacg tttcttggag caggttaaac atgagtgtca tttcttcaac gggacggagc 240 gggtgcggtt cctggacaga tacttctatc accaagagga gtacgtgcgc ttcgacagcg 300 acgtggggga gtaccgggcg gtgacggagc tggggcggcc tgatgccgag tactggaaca 360 gccagaagga cctcctggag cagaggcggg ccgcggtgga cacctactgc agacacaact 420 acggggttgt ggagagcttc acagtgcagc ggcgaggtga gcgcggcgcg gggcggggcc 480 tgagtccctg tgagcggaga atctgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt 540 gtgtgtgtgt gtgagagaga gagagagaga gagagagaga gagagagaga gagagcgcca 600 tctgtgagca tttagaatcc tctctatcct gagcaaggag ttctgcgggc acaggtgtgt 660 gtgtagagtg tggatttgtc cgtgtctgtg aggctgttgt gggaggggag gcaggagggg 720 gctgcttctt attcttggag acttctgtgg ggaggtgaca agggaggtgg gtgctggggg 780 ctggagagag aggcgacctt gattgtctcg ggtccttaga gatgcaagga agggaaatgt 840 atggggtgtg tggttggggt gaaggtttag gggaggagag ctgaggggta aggaaggttt 900 gggataatgt gaagaggcca gtttcagact gtccctggca cacacccttc atgtaatctc 960 tgaaataaaa gtgtgtgctg tttatttgta aaagcattag attaacttct aggggaattg 1020 agtagacctc tgaggcacct ctgaagcttc tttaggtata aatttcttgc tagttttttg 1080 ttttcttagt gttatatttt tacatagttg aaatgactgt gaaactaact ttttgaatta 1140 aagtttgaga acactgttac tattttatta taatgctaat aatttcatag ttacttttta 1200 aatatataat agttgtgaca caaattacct cactttcttt gttttttttt ttcttacact 1260 ttaagtttta gggtacatgt gcacaacgtg caggtttgtt acatatgtat acatgtgcca 1320 tgttggtgtg ctgcacccat taactcgtca tttaacatta ggtatatctc ctaatgctat 1380 ccctccccac ccccccaccc cacaacaggc cccagtgtgt gatgttcccc ttcctgtgtc 1440 catgtgttct cactgttcaa ttcccaccta tgagtgagaa catgcggtgt tcggtttttt 1500 gtccttgcca tagtttgctg agaatgatgg tttccagctt catccatgtc cctacaaagg 1560 acatgaactc attctttttt gtggctgcat agtattccat agtgtatatg tgccacattt 1620 tcttaatcca gtctatcatt gttggacatt tgggttggtt ccaagtcttt gctattgtga 1680 atagtgccgc aataaacata catgtgcata tgtctttata gcagcatgat ttataatcct 1740 tgggttatat acccagtaat gggatggctg ggtcaaatgg tatttctagt tctagatccc 1800 tgaggaatcg ccacactgac ttccacaatg gttgaactag tttagagtcc caccaacagg 1860 gtaaaagtgt tcctatttct ccacatcctc tccagcacct gttgcttcct gactttttaa 1920 tgatcgccat tctaactggt gtgagatggt atctcattgt ggttttgatt tgcaattctc 1980 tgatggccag tgatgatgag cattttttca tgtgtctttt ggctgcataa atgtcttctt 2040 ttgagaagtg tctgttcatg tcctttgccc actttttgat ggggtatttt gtttttttct 2100 tgtaaatttg tttgagttca ttgcagattc tggatattag ccctttgtca tatgagtaga 2160 ttgcaaaaat tttctcccat tctgtaggtt gcctcttcac tctgatggta gtttcttttg 2220 ctgtgcagaa gctctttagt ttaattagat cccatttgtc cattttggct tttgttgcca 2280 ttgcttttgg tgttttagac atgaagttct tgcccatgcc tatgtcctga atggtattgc 2340 ctaggttttc ttctagggtt tttatggttt caggtctaac atttaagtct ttaatccatc 2400 ttgaattaat ttttgtataa gcaaattacg tcactttccc cattgatgac ctttattatg 2460 acattcacca atagttgaaa atgtatgttt ctggttaatt tttgatttat atttttttga 2520 tttgtaatta ttttgaatta ttttgaccta tttattggcc agttgtaatt actgctctgc 2580 tctacgaatt acctgttgta tttggtaggt aatggacaat gatctattgt ctcttatctt 2640 tagggcttag tatttttctc agtgactttg tgggtttgtt gtactgtaag attattaaca 2700 ctttattgat atttgattca gtattttctc cagtttgtgg tatgtatatt ttgaaaattc 2760 ttttccatgt taagaatttg aacattttta tttaataaaa tatattgcaa aatgttaatt 2820 aatgattcac aaactagctc aagtctacca ttttgtggta ttgatgtctc caggtttctc 2880 cttccttctt aaaaaaaaat gtatttattg agagtatgct agtgtcaggg atttccctag 2940 gcataagcac tccaagtaat gagtcccaga cactgccttg atccaaatgt cattctggaa 3000 agaaaaatca ttttacagtg ataagcctaa taatagttat acttgttttg cctgggagat 3060 gcattgatca gctaaatgta aatataagaa ctttcaaaac taaaatgacg ttccttaatc 3120 tttctctctg ctttaggaat catgctttct taggaactta aagatttgga gaatcatttc 3180 tgtctgtccc accttcccag gagcataacc atttctgtgg tgttctaagg tgtgagtgca 3240 tggcagtagt attcctaaaa atccatattc agtttcctca tgtgccctac tccgtccctt 3300 tctctatcca cattgcttta aatcatattt ttctctcaag gtgtacaagg atgataaata 3360 ggtgccaagt ggagaaccca agtgtgacga gccctctcac agtagaatgg agtgagaagc 3420 tttctgacct cataaattga aggctatcgt aattcattct tttatatatt ttacttgcat 3480 taatcctcat ataacctcaa gaggtaaatt aatataatta tcctccatta ttggagagaa 3540 agttgagaca caaaagaatc aaaaactctt ccaggatcaa ccagtaaaag gcagaccttg 3600 gatttgaacc aggcaacctg gctcagaagt cagttttaat taccacactc tgtactttca 3660 aagatttgta aacgctttga caatgcatgt caatttcaag ctatgaagag ccaaacataa 3720 tttttcacaa tatctctcaa atctaatggg tccccactat aaagattaaa ttccaggctg 3780 atgacactgt gaggccacat ggccagctgt gctggaggcc tgctcaaggc cagagcctag 3840 gtttacagag aagcagacaa aaagctaaac aaggagactt actctgtctg catgacttat 3900 tccctctacc ttgttttctc ctagtctatc ctgaggtgac tgtgtatcct gcaaagaccc 3960 agcccctgca gcaccacaac ctcctggtct gctctgtgaa tggtttctat ccaggcagca 4020 ttgaagtcag gtggttccgg aacggccagg aagagaagac tggggtggtg tccacaggcc 4080 tgatccagaa tggagactgg accttccaga ccctggtgat gctggaaaca gttcctcgga 4140 gtggagaggt ttacacctgc caagtggagc acccaagcct gacgagccct ctcacagtgg 4200 aatggagtga gcagctttct gacttcataa atttctcacc caccaagacg cgaactttac 4260 taatccctga gtatcaggct tctcctatcc cacatcctat tttcatttgc tccacgttct 4320 catctccatc agcacaggtc actggggggt agccctgtaa tactttctag aaacacctgt 4380 accccctggg gaagcagtca tgcctgccag gcaggagagg ctgtccctct tttgaacctc 4440 cccatgatgt cacaagtcgg ggtcacctgc tgtctgtggg ctccaggccc tgcctctggg 4500 tctgagactg agtttctggt actgttgctc tgagtcgttt gttgtaatct gagaagagga 4560 gaagtatagg gaccttcctg acatgagggg agtccaatct cagctccgcc ttttattaga 4620 tctgtcactc taggcaacta cttaacctca ttgggtctca ggctttctgt tcatcagatg 4680 ttgaagtcct gtcttacatc aaggctgtaa tatttgaatg agtttgatga ctgaaccttg 4740 taactgttca gtgtgatttg aaaacctttc tcaagaaatg gtcagttatt ttagttcttg 4800 cagagcagcc ttctttctca ttttcaaagc tctgaatctc aaggtgtcaa ttaaagaggt 4860 tccatttggg ataaaaatca ctaaacctgg cttcctctct caggagcacg gtctgaatct 4920 gcacagagca agatgctgag tggagtcggg ggcttcgtgc tgggcctgct cttccttggg 4980 gccgggctgt tcatctactt caggaatcag aaaggtgagg agcctttggt agctggctgt 5040 ctccatacgc ttttctggag gaggaactat ggctttgctg aagttggttc tcagcatatg 5100 aatggccctg gataaagcct ctctactccc aaatgacctc caatgttctg caaatccaga 5160 aatcatcagt gcatggttgc tatgtcaaag cataatagct tgtggcctac agagataaca 5220 gaaagattaa caggtatagg tgctttggtt gagatcgtgg agcaaattaa ggaagagcaa 5280 ctaaagctaa tacaattaca ctggatcctg tgacagacac ttcacacttc atgggtcaca 5340 tggtctgttt ctgctcctct ctgccctggc tggtgtgggt tgtggtgtca gagaactctc 5400 aggtgggaga tctggagctg ggacattgtg ttggaggaca gatttgcttc catatccttt 5460 aagtgtatat cttctctttt tcctaggaca ctctggactt cagccaacag gtaatacctt 5520 ttcatcctct ttaagaaaca gatttggagg ccaggcgcag tggctcacgc ctgtaatccc 5580 agcactttgg gaggccgagg cgggcgaatc atgaggtcag gagttcgaga ccagcctgac 5640 caacgtggtg aaaccccgtc tctactaaaa atacaaaaaa aaatcagtcg ggcgtggtgg 5700 tgtgcgcctg taatcccagc tactcaggag gccaaggcag gagaatcgct ggaacccggg 5760 aggcagaggt tgcagtgagc cgagattggg ccactgcact ccagcctagg tgacagagtg 5820 agaccccatc tcaaaaaaac aaaaaaaaga aagaaagaaa cagatttcct ttccctagaa 5880 tgatggtaga ggtaataagg catgagacag aagtaatagc aaagacattg gatccaaatt 5940 tctgatcagg caatttacac cagaactcct cctctccact tagaaaaggc ctgtgctctg 6000 caggagtatt gactcatgga gacttcagaa cttgtttttc ttcttcctgc agtgctctca 6060 tctgagtcct tgaaagaggg caaaataaac tgttagtaga gccaggtctg aaaacaacac 6120 tttcttgcgt ctctgca 6137 // ID KX687271; SV 1; linear; genomic DNA; STD; HUM; 6125 BP. XX AC KX687271; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate CL4 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*04_04_01e2 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-6125 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-6125 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 86bcc7b2aac2c002b7f0fc63495c98db. DR IMGT/HLA; HLA-DRB1*04:04:01; HLA00689. XX FH Key Location/Qualifiers FH FT source 1..6125 FT /organism="Homo sapiens" FT /isolate="CL4" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <187..>5498 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*04_04_01e2" FT mRNA join(<187..456,3913..4194,4892..5002,5475..>5498) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*04_04_01e2" FT /product="MHC class II antigen" FT CDS join(<187..456,3913..4194,4892..5002,5475..>5498) FT /codon_start=3 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*04_04_01e2" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1B4" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1B4" FT /protein_id="AST15785.1" FT /translation="RFLEQVKHECHFFNGTERVRFLDRYFYHQEEYVRFDSDVGEYRAV FT TELGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVVESFTVQRRVYPEVTVYPAKTQPL FT QHHNLLVCSVNGFYPGSIEVRWFRNGQEEKTGVVSTGLIQNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSLTSPLTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGH FT SGLQPT" XX SQ Sequence 6125 BP; 1515 A; 1266 C; 1441 G; 1903 T; 0 other; cagggagggg gtcccaaaag ccttgggatc agaggtagtt tttccacctg gtcccccaga 60 cccccgtccg cctcagaaag acagaggatg agcccctggg ctgcgtgttg tcggggttgc 120 gggtggggcc agatagtgtc ttccccggag gccgcttctg taaccggatc gttcttgtcc 180 ccccagcacg tttcttggag caggttaaac atgagtgtca tttcttcaac gggacggagc 240 gggtgcggtt cctggacaga tacttctatc accaagagga gtacgtgcgc ttcgacagcg 300 acgtggggga gtaccgggcg gtgacggagc tggggcggcc tgatgccgag tactggaaca 360 gccagaagga cctcctggag cagaggcggg ccgcggtgga cacctactgc agacacaact 420 acggggttgt ggagagcttc acagtgcagc ggcgaggtga gcgcggcgcg gggcggggcc 480 tgagtccctg tgagcggaga atctgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt 540 gtgtgtgtga gagagagaga gagagagaga gagagagaga gagcgccatc tgtgagcatt 600 tagaatcctc tctatcctga gcaaggagtt ctgcgggcac aggtgtgtgt gtagagtgtg 660 gatttgtccg tgtctgtgag gctgttgtgg gaggggaggc aggagggggc tgcttcttat 720 tcttggagac ttctgtgggg aggtgacaag ggaggtgggt gctgggggct ggagagagag 780 gcgaccttga ttgtctcggg tccttagaga tgcaaggaag ggaaatgtat ggggtgtgtg 840 gttggggtga aggtttaggg gaggagagct gaggggtaag gaaggtttgg gataatgtga 900 agaggccagt ttcagactgt ccctggcaca cacccttcat gtaatctctg aaataaaagt 960 gtgtgctgtt tatttgtaaa agcattagat taacttctag gggaattgag tagacctctg 1020 aggcacctct gaagcttctt taggtataaa tttcttgcta gttttttgtt ttcttagtgt 1080 tatattttta catagttgaa atgactgtga aactaacttt ttgaattaaa gtttgagaac 1140 actgttacta ttttattata atgctaataa tttcatagtt actttttaaa tatataatag 1200 ttgtgacaca aattacctca ctttctttgt tttttttttt cttacacttt aagttttagg 1260 gtacatgtgc acaacgtgca ggtttgttac atatgtatac atgtgccatg ttggtgtgct 1320 gcacccatta actcgtcatt taacattagg tatatctcct aatgctatcc ctccccaccc 1380 ccccacccca caacaggccc cagtgtgtga tgttcccctt cctgtgtcca tgtgttctca 1440 ctgttcaatt cccacctatg agtgagaaca tgcggtgttc ggttttttgt ccttgccata 1500 gtttgctgag aatgatggtt tccagcttca tccatgtccc tacaaaggac atgaactcat 1560 tcttttttgt ggctgcatag tattccatag tgtatatgtg ccacattttc ttaatccagt 1620 ctatcattgt tggacatttg ggttggttcc aagtctttgc tattgtgaat agtgccgcaa 1680 taaacataca tgtgcatatg tctttatagc agcatgattt ataatccttg ggttatatac 1740 ccagtaatgg gatggctggg tcaaatggta tttctagttc tagatccctg aggaatcgcc 1800 acactgactt ccacaatggt tgaactagtt tagagtccca ccaacagggt aaaagtgttc 1860 ctatttctcc acatcctctc cagcacctgt tgcttcctga ctttttaatg atcgccattc 1920 taactggtgt gagatggtat ctcattgtgg ttttgatttg caattctctg atggccagtg 1980 atggtgagca ttttttcatg tgtcttttgg ctgcataaat gtcttctttt gagaagtgtc 2040 tgttcatgtc ctttgcccac tttttgatgg ggtattttgt ttttttcttg taaatttgtt 2100 tgagttcatt gcagattctg gatattagcc ctttgtcata tgagtagatt gcaaaaattt 2160 tctcccattc tgtaggttgc ctcttcactc tgatggtagt ttcttttgct gtgcagaagc 2220 tctttagttt aattagatcc catttgtcca ttttggcttt tgttgccatt gcttttggtg 2280 ttttagacat gaagttcttg cccatgccta tgtcctgaat ggtattgcct aggttttctt 2340 ctagggtttt tatggtttca ggtctaacat ttaagtcttt aatccatctt gaattaattt 2400 ttgtataagc aaattacgtc actttcccca ttgatgacct ttattatgac attcaccaat 2460 agttgaaaat gtatgtttct ggttaatttt tcatttatat ttttttgatt tgtaattatt 2520 ttgaattatt ttgacctatt tattggccag ttgtaattac tgctctgctc tacgaattac 2580 ctgttgtatt tggtaggtaa tggacaatga tctattgtct cttatcttta gggcttagta 2640 tttttctcag tgactttgtg ggtttgttgt actgtaagat tattaacact ttattgatat 2700 ttgattcagt attttctcca gtttgtggta tgtatatttt gaaaattctt ttccatgtta 2760 agaatttgaa catttttatt taataaaata tattgcaaaa tgttaattaa tgattcacaa 2820 actagctcaa gtctaccatt ttgtggtatt gatgtctcca ggtttctcct tccttcttaa 2880 aaaaaaatgt atttattgag agtatgctag tgtcagggat ttccctaggc ataagcactc 2940 caagtaatga gtcccagaca ctgccttgat ccaaatgtca ttctggaaag aaaaatcatt 3000 ttacagtgat aagcctaata atagttatac ttgttttgcc tgggagatgc attgatcagc 3060 taaatgtaaa tataagaact ttcaaaacta aaatgacgtt ccttaatctt tctctctgct 3120 ttaggaatca tgctttctta ggaacttaaa gatttggaga atcatttctg tctgtcccac 3180 cttcccagga gcataaccat ttctgtggtg ttctaaggtg tgagtgcatg gcagtagtat 3240 tcctaaaaat ccatattcag tttcctcatg tgccctactc cgtccctttc tctatccaca 3300 ttgctttaaa tcatattttt ctctcaaggt gtacaaggat gataaatagg tgccaagtgg 3360 agaacccaag tgtgacgagc cctctcacag tagaatggag tgagaagctt tctgacctca 3420 taaattgaag gctatcgtaa ttcattcttt tatatatttt acttgcatta atcctcatat 3480 aacctcaaga ggtaaattaa tataattatc ctccattatt ggagagaaag ttgagacaca 3540 aaagaatcaa aaactcttcc aggatcaacc agtaaaaggc agaccttgga tttgaaccag 3600 gcaacctggc tcagaagtca gttttaatta ccacactctg tactttcaaa gatttgtaaa 3660 cgctttgaca atgcatgtca atttcaagct atgaagagcc aaacataatt tttcacaata 3720 tctctcaaat ctaatgggtc cccactataa agattaaatt ccaggctgat gacactgtga 3780 ggccacatgg ccagctgtgc tggaggcctg ctcaaggcca gagcctaggt ttacagagaa 3840 gcagacaaaa agctaaacaa ggagacttac tctgtctgca tgacttattc cctctacctt 3900 gttttctcct agtctatcct gaggtgactg tgtatcctgc aaagacccag cccctgcagc 3960 accacaacct cctggtctgc tctgtgaatg gtttctatcc aggcagcatt gaagtcaggt 4020 ggttccggaa cggccaggaa gagaagactg gggtggtgtc cacaggcctg atccagaatg 4080 gagactggac cttccagacc ctggtgatgc tggaaacagt tcctcggagt ggagaggttt 4140 acacctgcca agtggagcac ccaagcctga cgagccctct cacagtggaa tggagtgagc 4200 agctttctga cttcataaat ttctcaccca ccaagacgcg aactttacta atccctgagt 4260 atcaggcttc tcctatccca catcctattt tcatttgctc cacgttctca tctccatcag 4320 cacaggtcac tggggggtag ccctgtaata ctttctagaa acacctgtac cccctgggga 4380 agcagtcatg cctgccaggc aggagaggct gtccctcttt tgaacctccc catgatgtca 4440 caagtcgggg tcacctgctg tctgtgggct ccaggccctg cctctgggtc tgagactgag 4500 tttctggtac tgttgctctg agtcgtttgt tgtaatctga gaagaggaga agtataggga 4560 ccttcctgac atgaggggag tccaatctca gctccgcctt ttattagatc tgtcactcta 4620 ggcaactact taacctcatt gggtctcagg ctttctgttc atcagatgtt gaagtcctgt 4680 cttacatcaa ggctgtaata tttgaatgag tttgatgact gaaccttgta actgttcagt 4740 gtgatttgaa aacctttctc aagaaatggt cagttatttt agttcttgca gagcagcctt 4800 ctttctcatt ttcaaagctc tgaatctcaa ggtgtcaatt aaagaggttc catttgggat 4860 aaaaatcact aaacctggct tcctctctca ggagcacggt ctgaatctgc acagagcaag 4920 atgctgagtg gagtcggggg cttcgtgctg ggcctgctct tccttggggc cgggctgttc 4980 atctacttca ggaatcagaa aggtgaggag cctttggtag ctggctgtct ccatacgctt 5040 ttctggagga ggaactatgg ctttgctgaa gttggttctc agcatatgaa tggccctgga 5100 taaagcctct ctactcccaa atgacctcca atgttctgca aatccagaaa tcatcagtgc 5160 atggttgcta tgtcaaagca taatagcttg tggcctacag agataacaga aagattaaca 5220 ggtataggtg ctttggttga gatcgtggag caaattaagg aagagcaact aaagctaata 5280 caattacact ggatcctgtg acagacactt cacacttcat gggtcacatg gtctgtttct 5340 gctcctctct gccctggctg gtgtgggttg tggtgtcaga gaactctcag gtgggagatc 5400 tggagctggg acattgtgtt ggaggacaga tttgcttcca tatcctttaa gtgtatatct 5460 tctctttttc ctaggacact ctggacttca gccaacaggt aatacctttt catcctcttt 5520 aagaaacaga tttggaggcc aggcgcagtg gctcacgcct gtaatcccag cactttggga 5580 ggccgaggcg ggcgaatcat gaggtcagga gttcgagacc agcctgacca acgtggtgaa 5640 accccgtctc tactaaaaat acaaaaaaaa atcagtcggg cgtggtggtg tgcgcctgta 5700 atcccagcta ctcaggaggc caaggcagga gaatcgctgg aacccgggag gcagaggttg 5760 cagtgagccg agattgggcc actgcactcc agcctaggtg acagagtgag accccatctc 5820 aaaaaaacaa aaaaaagaaa gaaagaaaca gatttccttt ccctagaatg atggtagagg 5880 taataaggca tgagacagaa gtaatagcaa agacattgga tccaaatttc tgatcaggca 5940 atttacacca gaactcctcc tctccactta gaaaaggcct gtgctctgca ggagtattga 6000 ctcatggaga cttcagaact tgtttttctt cttcctgcag tgctctcatc tgagtccttg 6060 aaagagggca aaataaactg ttagtagagc caggtctgaa aacaacactt tcttgcgtct 6120 ctgca 6125 // ID KX687272; SV 1; linear; genomic DNA; STD; HUM; 6141 BP. XX AC KX687272; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH43 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*04_05_01e1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-6141 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-6141 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; a0e55c15ea848152ec11f74b2223322e. DR IMGT/HLA; HLA-DRB1*04:05:01:01; HLA00690. XX FH Key Location/Qualifiers FH FT source 1..6141 FT /organism="Homo sapiens" FT /isolate="IH43" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <187..>5514 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*04_05_01e1" FT mRNA join(<187..456,3929..4210,4908..5018,5491..>5514) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*04_05_01e1" FT /product="MHC class II antigen" FT CDS join(<187..456,3929..4210,4908..5018,5491..>5514) FT /codon_start=3 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*04_05_01e1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1B1" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1B1" FT /protein_id="AST15786.1" FT /translation="RFLEQVKHECHFFNGTERVRFLDRYFYHQEEYVRFDSDVGEYRAV FT TELGRPSAEYWNSQKDLLEQRRAAVDTYCRHNYGVGESFTVQRRVYPEVTVYPAKTQPL FT QHHNLLVCSVNGFYPGSIEVRWFRNGQEEKTGVVSTGLIQNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSLTSPLTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGH FT SGLQPT" XX SQ Sequence 6141 BP; 1523 A; 1266 C; 1449 G; 1903 T; 0 other; cagggagggg gtcccaaaag ccttgggatc agaggtagtt tttccacctg gtcccccaga 60 cccccgtccg cctcagaaag acagaggatg agcccctggg ctgcgtgttg tcggggttgc 120 gggtggggcc agatagtgtc ttccccggag gccgcttctg taaccggatc gttcttgtcc 180 ccccagcacg tttcttggag caggttaaac atgagtgtca tttcttcaac gggacggagc 240 gggtgcggtt cctggacaga tacttctatc accaagagga gtacgtgcgc ttcgacagcg 300 acgtggggga gtaccgggcg gtgacggagc tggggcggcc tagcgccgag tactggaaca 360 gccagaagga cctcctggag cagaggcggg ccgcggtgga cacctactgc agacacaact 420 acggggttgg tgagagcttc acagtgcagc ggcgaggtga gcgcggcgcg gggcggggcc 480 tgagtccctg tgagcggaga atctgagtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt 540 gtgtgtgtgt gtgagagaga gagagagaga gagagagaga gagagagaga gagagagagc 600 gccatctgtg agcatttaga atcctctcta tcctgagcaa ggagttctgc gggcacaggt 660 gtgtgtgtag agtgtggatt tgtccgtgtc tgtgaggctg ttgtgggagg ggaggcagga 720 gggggctgct tcttattctt ggagacttct gtggggaggt gacaagggag gtgggtgctg 780 ggggctggag agagaggcga ccttgattgt ctcgggtcct tagagatgca aggaagggaa 840 atgtatgggg tgtgtggttg gggtgaaggt ttaggggagg agagctgagg ggtaaggaag 900 gtttgggata atgtgaagag gccagtttca gactgtccct ggcacacacc cttcatgtaa 960 tctctgaaat aaaagtgtgt gctgtttgtt tgtaaaagca ttagattaac ttctagggga 1020 attgagtaga cctctgaggc acctctgaag cttctttagg tataaatttc ttgctagttt 1080 tttgttttct tagtgttata tttttacata gttgaaatga ctgtgaaact aactttttga 1140 attaaagttt gaaaacactg ttactatttt attataatgc taataatttc atagttactt 1200 tttaaatata taatagttgt gacacaaatt acctcacttt ctttgttttt ttttttctta 1260 cactttaagt tttagggtac atgtgcacaa cgtgcaggtt tgttacatat gtatacatgt 1320 gccatgttgg tgtgctgcac ccattaactc gtcatttaac attaggtata tctcctaatg 1380 ctatccctcc ccaccccccc accccacaac aggccccagt gtgtgatgtt ccccttcctg 1440 tgtccatgtg ttctcactgt tcaattccca cctatgagtg agaacatgcg gtgttcggtt 1500 ttttgtcctt gccatagttt gctgagaatg atggtttcca gcttcatcca tgtccctaca 1560 aaggacatga actcattctt ttttgtggct gcatagtatt ccatagtgta tatgtgccac 1620 attttcttaa tccagtctat cattgttgga catttgggtt ggttccaagt ctttgctatt 1680 gtgaatagtg ccgcaataaa catacatgtg catatgtctt tatagcagca tgatttataa 1740 tccttgggtt atatacccag taatgggatg gctgggtcaa atggtatttc tagttctaga 1800 tccctgagga atcgccacac tgacttccac aatggttgaa ctagtttaga gtcccaccaa 1860 cagggtaaaa gtgttcctat ttctccacat cctctccagc acctgttgct tcctgacttt 1920 ttaatgatcg ccattctaac tggtgtgaga tggtatctca ttgtggtttt gatttgcaat 1980 tctctgatgg ccagtgatga tgagcatttt ttcatgtgtc ttttggctgc ataaatgtct 2040 tcttttgaga agtgtctgtt catgtccttt gcccactttt tgatggggta ttttgttttt 2100 ttcttgtaaa tttgtttgag ttcattgcag attctggata ttagcccttt gtcatatgag 2160 tagattgcaa aaattttctc ccattctgta ggttgcctct tcactctgat ggtagtttct 2220 tttgctgtgc agaagctctt tagtttaatt agatcccatt tgtccatttt ggcttttgtt 2280 gccattgctt ttggtgtttt agacatgaag ttcttgccca tgcctatgtc ctgaatggta 2340 ttgcctaggt tttcttctag ggtttttatg gtttcaggtc taacatttaa gtctttaatc 2400 catcttgaat taatttttgt ataagcaaat tacgtcactt tccccattga tgacctttat 2460 tatgacattc accaatagtt gaaaatgtat gtttctggtt aatttttgat ttatattttt 2520 ttgatttgta attattttga attattttga cctatttatt ggccagttgt aattactgct 2580 ctgctctacg aattacctgt tgtatttggt aggtaatgga caatgatcta ttgtctctta 2640 tctttagggc ttagtatttt tctcagtgac tttgtgggtt tgttgtactg taagattatt 2700 aacactttat tgatatttga ttcagtattt tctccagttt gtggtatgta tattttgaaa 2760 attcttttcc atgttaagaa tttgaacatt tttatttaat aaaatatatt gcaaaatgtt 2820 aattaatgat tcacaaacta gctcaagtct accattttgt ggtattgatg tctccaggtt 2880 tctccttcct tcttaaaaaa aaatgtattt attgagagta tgctagtgtc agggatttcc 2940 ctaggcataa gcactccaag taatgagtcc cagacactgc cttgatccaa atgtcattct 3000 ggaaagaaaa atcattttac agtgataagc ctaataatag ttatacttgt tttgcctggg 3060 agatgcattg atcagctaaa tgtaaatata agaactttca aaactaaaat gacgttcctt 3120 aatctttctc tctgctttag gaatcatgct ttcttaggaa cttaaagatt tggagaatca 3180 tttctgtctg tcccaccttc ccaggagcat aaccatttct gtggtgttct aaggtgtgag 3240 tgcatggcag tagtattcct aaaaatccat attcagtttc ctcatgtgcc ctactccgtc 3300 cctttctcta tccacattgc tttaaatcat atttttctct caaggtgtac aaggatgata 3360 aataggtgcc aagtggagaa cccaagtgtg acgagccctc tcacagtaga atggagtgag 3420 aagctttctg acctcataaa ttgaaggcta tcgtaattca ttcttttata tattttactt 3480 gcattaatcc tcatataacc tcaagaggta aattaatata attatcctcc attattggag 3540 agaaagttga gacacaaaag aatcaaaaac tcttccagga tcaaccagta aaaggcagac 3600 cttggatttg aaccaggcaa cctggctcag aagtcagttt taattaccac actctgtact 3660 ttcaaagatt tgtaaacgct ttgacaatgc atgtcaattt caagctatga agagccaaac 3720 ataatttttc acaatatctc tcaaatctaa tgggtcccca ctataaagat taaattccag 3780 gctgatgaca ctgtgaggcc acatggccag ctgtgctgga ggcctgctca aggccagagc 3840 ctaggtttac agagaagcag acaaaaagct aaacaaggag acttactctg tctgcatgac 3900 ttattccctc taccttgttt tctcctagtc tatcctgagg tgactgtgta tcctgcaaag 3960 acccagcccc tgcagcacca caacctcctg gtctgctctg tgaatggttt ctatccaggc 4020 agcattgaag tcaggtggtt ccggaacggc caggaagaga agactggggt ggtgtccaca 4080 ggcctgatcc agaatggaga ctggaccttc cagaccctgg tgatgctgga aacagttcct 4140 cggagtggag aggtttacac ctgccaagtg gagcacccaa gcctgacgag ccctctcaca 4200 gtggaatgga gtgagcagct ttctgacttc ataaatttct cacccaccaa gacgcgaact 4260 ttactaatcc ctgagtatca ggcttctcct atcccacatc ctattttcat ttgctccacg 4320 ttctcatctc catcagcaca ggtcactggg gggtagccct gtaatacttt ctagaaacac 4380 ctgtaccccc tggggaagca gtcatgcctg ccaggcagga gaggctgtcc ctcttttgaa 4440 cctccccatg atgtcacaag tcggggtcac ctgctgtctg tgggctccag gccctgcctc 4500 tgggtctgag actgagtttc tggtactgtt gctctgagtc gtttgttgta atctgagaag 4560 aggagaagta tagggacctt cctgacatga ggggagtcca atctcagctc cgccttttat 4620 tagatctgtc actctaggca actacttaac ctcattgggt ctcaggcttt ctgttcatca 4680 gatgttgaag tcctgtctta catcaaggct gtaatatttg aatgagtttg atgactgaac 4740 cttgtaactg ttcagtgtga tttgaaaacc tttctcaaga aatggtcagt tattttagtt 4800 cttgcagagc agccttcttt ctcattttca aagctctgaa tctcaaggtg tcaattaaag 4860 aggttccatt tgggataaaa atcactaaac ctggcttcct ctctcaggag cacggtctga 4920 atctgcacag agcaagatgc tgagtggagt cgggggcttc gtgctgggcc tgctcttcct 4980 tggggccggg ctgttcatct acttcaggaa tcagaaaggt gaggagcctt tggtagctgg 5040 ctgtctccat acgcttttct ggaggaggaa ctatggcttt gctgaagttg gttctcagca 5100 tatgaatggc cctggataaa gcctctctac tcccaaatga cctccaatgt tctgcaaatc 5160 cagaaatcat cagtgcatgg ttgctatgtc aaagcataat agcttgtggc ctacagagat 5220 aacagaaaga ttaacaggta taggtgcttt ggttgagatc gtggagcaaa ttaaggaaga 5280 gcaactaaag ctaatacaat tacactggat cctgtgacag acacttcaca cttcatgggt 5340 cacatggtct gtttctgctc ctctctgccc tggctggtgt gggttgtggt gtcagagaac 5400 tctcaggtgg gagatctgga gctgggacat tgtgttggag gacagatttg cttccatatc 5460 ctttaagtgt atatcttctc tttttcctag gacactctgg acttcagcca acaggtaata 5520 ccttttcatc ctctttaaga aacagatttg gaggccaggc gcagtggctc acgcctgtaa 5580 tcccagcact ttgggaggcc gaggcgggcg aatcatgagg tcaggagttc gagaccagcc 5640 tgaccaacgt ggtgaaaccc cgtctctact aaaaatacaa aaaaaaatca gtcgggcgtg 5700 gtggtgtgcg cctgtaatcc cagctactca ggaggccaag gcaggagaat cgctggaacc 5760 cgggaggcag aggttgcagt gagccgagat tgggccactg cactccagcc taggtgacag 5820 agtgagaccc catctcaaaa aaacaaaaaa aagaaagaaa gaaacagatt tcctttccct 5880 agaatgatgg tagaggtaat aaggcatgag acagaagtaa tagcaaagac attggatcca 5940 aatttctgat caggcaattt acaccagaac tcctcctctc cacttagaaa aggcctgtgc 6000 tctgcaggag tattgactca tggagacttc agaacttgtt tttcttcttc ctgcagtgct 6060 ctcatctgag tccttgaaag agggcaaaat aaactgttag tagagccagg tctgaaaaca 6120 acactttctt gcgtctctgc a 6141 // ID KX687273; SV 1; linear; genomic DNA; STD; HUM; 4630 BP. XX AC KX687273; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH39 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*07_01_01_01v1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-4630 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-4630 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 0e8890f0ea134bac3823b933b6712499. XX FH Key Location/Qualifiers FH FT source 1..4630 FT /organism="Homo sapiens" FT /isolate="IH39" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <242..>4313 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*07_01_01_01v1" FT mRNA join(<242..511,2726..3007,3704..3814,4290..>4313) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*07_01_01_01v1" FT /product="MHC class II antigen" FT CDS join(<242..511,2726..3007,3704..3814,4290..>4313) FT /codon_start=3 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*07_01_01_01v1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1C5" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1C5" FT /protein_id="AST15787.1" FT /translation="RFLWQGKYKCHFFNGTERVQFLERLFYNQEEFVRFDSDVGEYRAV FT TELGRPVAESWNSQKDILEDRRGQVDTVCRHNYGVGESFTVQRRVHPEVTVYPAKTQPL FT QHHNLLVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSVMSPLTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGH FT SGLQPT" XX SQ Sequence 4630 BP; 1128 A; 973 C; 1162 G; 1367 T; 0 other; cagggagggg gtcccaaagc ctggggatca gaggtagttt tcccacctgg tcccccagac 60 ccccgtccgc ttcagaaaga cagaggatga tcccctggcc tgcgcgcagt cggggttgcg 120 ggtggggccg gtcaaggttc ccagtgcccg caccctgccc agggagcccc ggatggcggc 180 gtcgctgtca gtgtttttcc cggagaccgc ccctgtgacc ggatcgtttg tgcccccaca 240 gcacgtttcc tgtggcaggg taagtataag tgtcatttct tcaacgggac ggagcgggtg 300 cagttcctgg aaagactctt ctataaccag gaggagttcg tgcgcttcga cagcgacgtg 360 ggggagtacc gggcggtgac ggagctaggg cggcctgtcg ccgagtcctg gaacagccag 420 aaggacatcc tggaggacag gcggggccag gtggacaccg tgtgcagaca caactacggg 480 gttggtgaga gcttcacagt gcagcggcga ggtgagcgcg gcggaggcgg ggcctgggtc 540 tctccgagct gggaatctga gtgtggttgt gtgtgtgtgt gtgagagaga gagagagagc 600 gagaccgcca tctgtgagca ttcagaatcc tctcaatcct gagcaaggag ttctgaaggc 660 acaggtgtgt gtgtagagtg tggatttgtc tgtgtggctg ttgtgggagg ggaggcagga 720 ggggggctgc ttcttatcct tggaggcctc tgtggggagg tgacgtggga ggggggtaca 780 gggggctgga gacagattgg accttgattg tcctgggtcc ttggagatgc agggaaggga 840 ggtgtagggt gtgtgtggtt ggggtgaagg tttaggagag gagaactgag gggtatagaa 900 ggtttgggat aatgtgagga ggccagtacc agacggtccc tggcacacac ccttcatgca 960 atctctgaaa taaaagtgtg tgctgtttgt ttgcaaaagc attaaattaa tttctagggg 1020 aactgaggag acctctgagg cacctctgaa gcttctttat tttaggtcta aatttcttgc 1080 tatttttttg ttttcttagt gtgtatattt ttacatactt gaaatgactg tgaaactaac 1140 tttttgaatt aaagtttgaa cacagttact atttcattat aatgctaata attccatagt 1200 tacatattat tcttttatat ttaatagttg tgacacaaat tacctcactt tcccctttga 1260 tgacctttat tatgacattg accaaaagtt gaaaatgtat gtttctggtt aatttttgat 1320 ttatattttt ttggtttgta attcttttga attatattga cctatttatt ggccagttat 1380 aattactgct caaccaatta cctgttgtgt aatggacagt gatctattgt ctgttatctc 1440 tagggcttag tatttttctc agtgactttg tgggttcttt gtactgtaag attattaaca 1500 ctttattgat atttgattca gtattttctc cagtttgtgg tatgtatatt ttgaaaattc 1560 ttttccatgt taagaatttg aacatttttg tttagtaaaa tatattgcaa aatattaatt 1620 aatgatttac aaactagctc aagtctacca ttttgtggta ttgttgtctc caagtttctc 1680 cttccttctt aaaaaaaatg tatttattga gagcatgcta gtgtgttagg gatttcccta 1740 ggcataatca ccccaagtaa tgagtcccag accctgcctt gatccaaatt tcattctgga 1800 aagaaaaatc attttacaat gataggccta ataatagtta tacttgtttt gcctgggaga 1860 tgcattgatc agctaaatgt aaatataaga actttcaaaa ctaaaatgac gttccttaat 1920 ccttctctct gctttaggac tcatgctttt ttaggaactt aaagatttgg agaatcattt 1980 ctgtctgtcc caccttccca ggagcataac catttctgtg gtgttctaag gtgtgagtgc 2040 atggcagtag tattcctaaa aattcatact cagtttcctc atgtgcccta ctccgtccct 2100 ttctctatcc acattgcttt aaatcatatt tttccctcaa ggtgtacaag gatgataaat 2160 aggtgccaag tggtgcacac aagtgtgatg agccctctca cagtggaatg gagtgagaag 2220 ctttctaacc tcataaattg aaggctatct tcagtctttt ttttatatat tttactcgca 2280 ttaatcctca tataacctca agaggtaaat taatataatt atcctccatt actggtgaga 2340 aagttgagac acaaaagaat caaatactct tccaggatca accagtaaaa ggcagacctt 2400 ggatttgaac caggcaacct ggctcagaag tcagttttaa ttactacact ctgtacgttc 2460 aaagatttgt aaacactttg acaatgcatg tcaatttcaa gctatgaaga gccaaacata 2520 atttttcaca gtatctctca aatctaatgg gtccccacta taaagattaa attccaggct 2580 gatgagactg tgaggccaca tggccagctg tgttggaggt ctgctcaagg ccagagccta 2640 ggtttacaga gaagcagaca aaaaactaaa caaggagact tactctgtct tcctgactca 2700 ttccctctac cttgttttct cctagtccat cctgaggtga ctgtgtatcc tgccaagact 2760 cagcccctgc agcaccacaa cctcctggtc tgctctgtga gtggtttcta tccaggcagc 2820 attgaagtca ggtggttccg gaacggccag gaagagaagg ctggggtggt gtccacaggc 2880 ctgatccaga atggagactg gaccttccag accctggtga tgctggaaac agttcctcgg 2940 agtggagaag tttacacctg ccaagtggag cacccaagtg tgatgagccc tctcacagtg 3000 gaatggagtg agcagctttc tgacttcata aatttctcac ccaccaagaa ggggactgtg 3060 ctaatacctg agtgtcgggt ttctcctctc ccacatccta ttttcatttg ctccatgttc 3120 tcatctccat cagcacaggt cactgagggt agccctgtaa tactttctag aaacacctgt 3180 accccctggg gaagaagtca tgcctgccag gcaggagagg ctgtccctct tttgaacctc 3240 cccatgatgt cacaggtcag gatcacctgc tgtccgtggg ctccaggccc tgcctctggg 3300 tctgagactg agtttctggt gctgttgctc tgagttgttt gttgtaatct gagaagagga 3360 gaagtatagg ggccttcctg acatgaggag agtccaatct cagctctgcc ttttattagg 3420 tctgtcactc taggcaacta cttaacctca ttgggtctca ggctttctgt ggatcagatg 3480 ttgaagtcct gccttacatc aaggttgtaa tatttgaatg actttgatgc ctgaatcttg 3540 taactgttca gtgtgatttg aaaacctttt tttctcaaga aatagttatt ttagttcttg 3600 cagggcagcc ttctttctca ttttcaaagc tctgaatctc agggtgtcaa ttaaaggggt 3660 tccatttaag ataaaaatca ctaatccttg cttcctctct caggagcacg gtctgaatct 3720 gcacagagca agatgctgag tggagtcggg ggctttgtgc tgggcctgct cttccttggg 3780 gccgggttgt tcatctactt caggaatcag aaaggtgagg agcctttggt aactggctct 3840 ctccatacgc ttttctggag gaggaactat ggctttgctg aggttagttc tcagtatatg 3900 aatggccctg gataaagcct ttctattccc aaatgacctc caatgttctg caattccaga 3960 aatcatcagt gcatggttgc tatgtcaaag cataatagct tgtggcctac agagataaca 4020 gaaaggttaa caggtatggg tgctttggtt gagattctgg agcaaattaa ggaagagcca 4080 ctaaggctaa tggaattaca ctggatcctg tgacagacac ttcacgcttc atgggtcacg 4140 tggtctgttt ctgctcctct gtgccctggt tggtgtgggt tgtggtgtta gagaaatctc 4200 aggtgggaga tctggggctg gaacattgtg ttggaggaca gatttgcttc cgtatccttt 4260 aagtccatat cttttcctct tttccctagg acactctgga cttcagccaa caggtaatac 4320 cttttcatcc tctttaagaa acagatttgg aggccgggcg tggtgggtta cacctgtaat 4380 cccagcactt tgggaggccg aggggggcag atcaggaggt caggagtcga gaccagcctg 4440 accaacatgg tgaaaccccg tctctactaa aaatacaaaa attagtgggg cgtggtggtg 4500 tgcgcctgta atcccagcta ctcaggagac tgaggcagga gaatcgcttg aacccgggag 4560 gcagaggttg cagtgagccg agattgcacc gctgcactcc agcctaggca acagaatgag 4620 actccgtctc 4630 // ID KX687274; SV 1; linear; genomic DNA; STD; HUM; 5025 BP. XX AC KX687274; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH49 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*09_01_02e1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5025 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-5025 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 757bcddb046d577ed39b986bf3a350a7. DR IMGT/HLA; HLA-DRB1*09:01:02:01; HLA00749. XX FH Key Location/Qualifiers FH FT source 1..5025 FT /organism="Homo sapiens" FT /isolate="IH49" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <243..>4337 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*09_01_02e1" FT mRNA join(<243..512,2749..3030,3728..3838,4314..>4337) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*09_01_02e1" FT /product="MHC class II antigen" FT CDS join(<243..512,2749..3030,3728..3838,4314..>4337) FT /codon_start=3 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*09_01_02e1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1A3" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1A3" FT /protein_id="AST15788.1" FT /translation="RFLKQDKFECHFFNGTERVRYLHRGIYNQEENVRFDSDVGEYRAV FT TELGRPVAESWNSQKDFLERRRAEVDTVCRHNYGVGESFTVQRRVHPEVTVYPAKTQPL FT QHHNLLVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSVMSPLTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGH FT SGLQPT" XX SQ Sequence 5025 BP; 1283 A; 1021 C; 1267 G; 1454 T; 0 other; cagggagggg gtcccaaaag ccttgggatc agaaggggtt ttcccgcctg gtcccccaga 60 ccccccgttc gcctcaggaa gacggaggat gagcctctgg gctgcgcgtg gtcggggtta 120 tggttgggat cagttaaggt tccagtgcca gcaccccgcc cagggagccc cggatggtgg 180 cgtctctgtt agtgtcttcc ccggaggccg cccctgtgac cggatccttc gtgtccccac 240 agcacgtttc ttgaagcagg ataagtttga gtgtcatttc ttcaacggga cggagcgggt 300 gcggtatctg cacagaggca tctataacca agaggagaac gtgcgcttcg acagcgacgt 360 gggggagtac cgggcggtga cggagctggg gcggcctgtc gccgagtcct ggaacagcca 420 gaaggacttc ctggagcgga ggcgggccga ggtggacacc gtgtgcagac acaactacgg 480 ggttggtgag agcttcacag tgcagaggcg aggtaagcat ggtggggggc ggggcctggg 540 tccctgtgaa ctgggaatct gagtgtgtgt gtgtgtgtgt gtgagagaga gagagagaga 600 ggaagagaga gacagaaaga gggagcgcgc catctgtgag catttagaat cctctcaatc 660 ttgagtaagg agttctgagg acacaggtgt gtgtgtagag tgtggatttg tctgtgtggc 720 tgttgtggga ggggaggcag gaggggggct gcttcttatc cttggaggcc tctgtgggga 780 ggtgacgtgg gaggggggta cagggggctg gagacagatt ggaccttgat tgtcctgggt 840 ccttggagat gcagggaagg gaagtgtagg gtgtgtgtgg ttggggtgaa ggtttaggag 900 aggagaactg aggggtatag aaggtttggg ataatgtgag gaggccagtt ccagacggtc 960 cctggcacac acccttcatg caatctctga aataaaagtg tgtgctgttt gtttgcaaaa 1020 gcattaaatt aatttctagg ggaactgagg agacctctga ggcacctcta aagcttcttt 1080 attttaggtc taaatttctt gctatttttt tgttttctta gtgtgtatat ttttacatac 1140 ttgaaatgac tgtgaaacta actttttgaa ttaaagtttg aacacagtta ctatttcatt 1200 ataatgctaa taattccata gttacatatt attcttttat atttaatagt tgtgacacaa 1260 attacctcac tttccccttt gatgaccttt attatgacat tgaccaaaag ttgaaaatgt 1320 atgtttctgg ttaatttttg atttatattt ttttggtttg taattctttt gaattatatt 1380 gacctattta ttggccagtt ataattactg ctctaccaat tacctgttgt gtaatggaca 1440 gtgatctatt gtctgttatc tctagggctt agtatttttc tcagtgactt tgtgggttct 1500 ttgtactgta agattattaa cactttattg atatttgatt cagtattttc tccagtttgt 1560 ggtatgtata ttttgaaaat tcttttccat gttaagaatt tgaacatttt tatttagtaa 1620 aatatattgc aaaatattaa ttaatgattt acaaactagc tcaagtctac cattttgtgg 1680 tattgttgtc tccaagtttc tccttccttc ttaaaaaaaa atgtatttat tgagagcatg 1740 ctagtgtgtt agggatttcc ctaggcataa tcaccccaag taatgagtcc cagaccctgc 1800 cttgatccaa atttcattct ggaaagaaaa atcattttac aatgataggc ctaataatag 1860 ttatacttgt tttgcctggg agatgcattg atcagctaaa tgtaaatata agaactttca 1920 aaactaaaat gacgttcctt aatcattctc tctgctttag gactcatgct tttttaggaa 1980 cttaaagatt tggagaatca tttctgtctg tcccaccttc ccaggagcat aaccatttct 2040 gtggtgttct aaggtgtgag tgcatggcag tagtattcct aaaaattcat actcagtttc 2100 ctcatgtgcc ctactccgtc cctttctcta ttcacattgc tttaaatcat atttttccct 2160 caaggtgtac aaggatgata aataggtgcc aagtggtgca cacaagtgtg atgagccctc 2220 tcacagtgga atggagtgag aagctttcta acctcataaa ttgaaggcta tcttcagtct 2280 tttttttatg tattttactc gcattaatcc tcatataacc tcaagaggta aattaatata 2340 attatcctcc attattggtg agaaagttga gacacaaaag aatcaaaaac tcttccagga 2400 tcaaccagta aaaggcagac cttggatttg aaccaggcaa cctggctcag aagtcagttt 2460 taattaccac actctgtacg ttcaaagatt tgtaaacact ttgacaatgc atgtcaattt 2520 caagctatga agagccaaac ataatttttc acagtatctc tcaaatctaa tgggtcccca 2580 ctataaagat taaattccag gctgatgaga ctgtgaggcc acatggccag ctgtgttgga 2640 ggtctgctca aggccagagc ctaggtttac agagaagcag acaaaaagct aaacaaggag 2700 acttactctg tcttcctgac tcattccctc taccttgttt tctcctagtc catcctgagg 2760 tgactgtgta tcctgccaag actcagcccc tgcagcacca caacctcctg gtctgctctg 2820 tgagtggttt ctatccaggc agcattgaag tcaggtggtt ccggaacggc caggaagaga 2880 aggctggggt ggtgtccaca ggcctgatcc agaatggaga ctggaccttc cagaccctgg 2940 tgatgctgga aacagttcct cggagtggag aagtttacac ctgccaagtg gagcacccaa 3000 gtgtgatgag ccctctcaca gtggaatgga gtgagcagct ttctgacttc ataaatttct 3060 cacccaccaa gaaggggact gtgctaatcc cttgagtgtc gggtttctcc tctcccacat 3120 cctattttca tttgctccat gttctcatct ccatcagcac aggtcactga gggtagccct 3180 gtaatacttt ctagaaacac ctgtaccccc tggggaagca atcatgcctg ccaggcagga 3240 gaggctgtcc ctcttttgaa cctccccatg atgtcacagg tcaggatcac ctgctgtccg 3300 tgggctccag gccctgcctc tgggtctgag actgagtttc tggtgctgtt gctctgagtt 3360 gtttgttgta atctgagaag aggagaagta taggggcctt cctgacatga ggagagtcca 3420 atctcagctc tgccttttat taggtctgtc actctaggca actacttaac ctcattgggt 3480 ctcaggcttt ctgtggatca gatgttgaag tcctgcctta catcaaggct gtaatatttg 3540 aatgagtttg atgcctgaat cttgtaactg ttcagtgtga tttgaaaacc tttttttctc 3600 aagaaatagt tattttagtt cttgcagggc agccttcttt ctcattttca aagctctgaa 3660 tctcagggtg tcaattaaag aggttccatt taagataaaa atcactaaac ctggcttcct 3720 ctctcaggag cacggtctga atctgcacag agcaagatgc tgagtggagt cgggggcttt 3780 gtgctgggcc tgctcttcct tggggccggg ctgttcatct acttcaggaa tcagaaaggt 3840 gaggagcctt tggtaactgg ctctctccat acgcttttct ggaggaggaa ctatggcttt 3900 gctgaggtta gttctcagta tatgaatggc cctggataaa gcttttctat tcccaaatga 3960 cctccaatgt tctgcaattc cagaaatcat cagtgcatgg ttgctatgtc aaagcataat 4020 agcttgtggc ctacagagat aacagaaagg ttaacaggta tgggtgcttt ggttgagatt 4080 ctggagcaaa ttaaggaaga gccactaagg ctaatggaat tacactggat cctgtgacag 4140 acacttcacg cttcatgggt cacgtggtct gtttctgctc ctctgtgccc tggttggtgt 4200 gggttgtggt gttagagaaa tctcaggtgg gagatctggg gctggaacat tgtgttggag 4260 gacagatttg cttccgtatc ctttaagtac atatcttttc ctcttttccc taggacactc 4320 tggacttcag ccaacaggta ataccttttc atcctcttta agaaacagat ttggaggccg 4380 ggtgtggtgg cttacacctg taatcccagc actttgggag gccgaggcgg gcagatcagg 4440 aggtcaggag tcgagaccag cctgaccaac atggtgaaac cccgtctcta ctaaaaatac 4500 aaaaattagt ggggcgtggt ggtgtgcgcc tgtaatccca gctactcagg aggctgaggc 4560 aggagaatcg cttgaacccg ggaggcagag gttgcagtga gccgagattg caccactgca 4620 ctccagccta ggcaacagaa tgagactccg tctcaaaaaa aaaaagaaag aaagggacgg 4680 agggagggag ggaaggaagg aaggaaggaa ggaaggaaag aaggaaagaa agaaagaaaa 4740 gaaagagaga gatttccttt ccctagaatg atggtagagg tgataaggca tgagacagaa 4800 gtaacagcaa agacattgga tccaaatttc tgatcaggca atttacacca aaactcctcc 4860 tctccactta gaaaaggcct gtgctctgca ggagtattga ctcatggaga cttcagaact 4920 tgtttttctt cttcctgcag tgctctcatc tgagtctttg aaagagggca aaataaactg 4980 ttagtggagc caggtctgaa aacaacactt tcttctgtct ctgca 5025 // ID KX687275; SV 1; linear; genomic DNA; STD; HUM; 5141 BP. XX AC KX687275; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate DL6 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*13_03_01e1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5141 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-5141 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; c75aedfcb426a8fc7c2cf6efdcb98dba. DR IMGT/HLA; HLA-DRB1*13:03:01; HLA00799. XX FH Key Location/Qualifiers FH FT source 1..5141 FT /organism="Homo sapiens" FT /isolate="DL6" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <245..>4354 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*13_03_01e1" FT mRNA join(<245..514,2765..3046,3745..3855,4331..>4354) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*13_03_01e1" FT /product="MHC class II antigen" FT CDS join(<245..514,2765..3046,3745..3855,4331..>4354) FT /codon_start=3 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*13_03_01e1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G189" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G189" FT /protein_id="AST15789.1" FT /translation="RFLEYSTSECHFFNGTERVRFLDRYFYNQEEYVRFDSDVGEYRAV FT TELGRPSAEYWNSQKDILEDKRAAVDTYCRHNYGVGESFTVQRRVHPKVTVYPSKTQPL FT QHHNLLVCSVSGFYPGSIEVRWFRNGQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSVTSPLTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGH FT SGLQPR" XX SQ Sequence 5141 BP; 1275 A; 1059 C; 1288 G; 1519 T; 0 other; tagggagggg ggtcccaaaa gcctggggat cagacgtggt tttcccgcct ggtcccccag 60 gccccctttc gcctcaggaa gacagaggag gagcccctgg gctgcaggtg gtgggcgttg 120 cggcgggggg cgggtaaggg tccccagtgc ccgcacccgg cccagggagc cccggatggc 180 ggcgtcactg tcagtgtctt ctcaggaggc cgcctgtgtg actggatcgt tcgtgtcccc 240 acagcacgtt tcttggagta ctctacgtct gagtgtcatt tcttcaatgg gacggagcgg 300 gtgcggttcc tggacagata cttctataac caagaggagt acgtgcgctt cgacagcgac 360 gtgggggagt accgggcggt gacggagctg gggcggccta gcgccgagta ctggaacagc 420 cagaaggaca tcctggaaga caagcgggcc gcggtggaca cctactgcag acacaactac 480 ggggttggtg agagcttcac ggtgcagcgg cgaggtgagc gcggcgcggg gcggggcctg 540 agtccctgtg agctgggaat ctgagtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt 600 gtgtgtgtgt gtgtgagaga gagagagaca gagagacaga gagagagaga gcgccatctg 660 tgagcattta gaatcctctc tatcctgagc aaggagttct gagggcacag gtgtgtgtgt 720 agagtgtgga tttgtctgtg tctgtgaggc tgttgtggga ggggaggcag gagggggctg 780 cttcttattc ttggaggact ctgtggggag gtgacaaggg aggtgggtgc gggcggctgg 840 agagagaggt gaccttgatt gtctcgggtc cttagagatg cagggaaggg aaatgtaagg 900 ggtgtgtggt tggggtgaag gtttagggga ggagagctga ggggtaagga aggtttggga 960 taatgtgagg aggccggttc cagactgtcc ctggcacaca cccttcatgt aatctctgaa 1020 ataaaagtgt gtgctgtttg tttgtaaaag cattagatta atttctaggg gaattgagga 1080 gacctctgag gcatctctga agcttcttta ggtctaaatt tcttgctagt tttttgtttt 1140 ttattgtgta tatttttaca tagtagaaat gactgtgaaa ctaacttttt gaattaaagt 1200 tttaacacag ttactatttt attataatgc taatagtttt ctagtagtta catattattc 1260 ttttatatat aatagttgtg acacaactta cctcactttc ccctttgttg acctttatta 1320 tgacattcac caaaatttga aaatgtatgt ttctggttaa tttttaattt atattttttt 1380 catttataat tcttttgaat tattttgacc tatttattgg ccagttttaa taactgctgt 1440 aagaattccc tattgtattt ggtagggaat ggacaatgat ctactgccta atatctcgag 1500 ggcttagtat ttttctcagt gactttgtgg gttctttgta ctgtgagatt attaacactt 1560 tattgatatt tgattcagca tttgctccag tttgtggttt gtatgttgat tttgaaaatt 1620 cttttccatg ttaagaattt gaacattttt atataataaa atatgttgca aaatttttat 1680 taatgattta caatccatct taaatctgcc attttgtggt attgttgtct ccaggtttct 1740 ccttacttct aaaaaaaatt gcatttattg agagtctgct agtgttaggg attttcctgg 1800 gcataagcac cccaagtgac gagtcccaga cactgcctta atccaaatgt gattctggaa 1860 agaaaaatca ttttacaatg ataggcctaa taataattaa gcttgtgttg catgggagat 1920 gcattgatca gctaaatgta aatataagaa ctttcaaaac taaaatgacg ttccttaatc 1980 cttctctctg ctttatgact catgcttttc tgggaaagta aaaatttgga gaatcatttc 2040 tgtctgtccc accttcccag gggcagaacc atttctgtgg tgttctaagg tgtgagtgca 2100 tggcggtagt attcctaaaa attcatattc ggtttcgtca tgtacccaac tctgtcccgt 2160 tatctatcaa cattgtttta aatcatatat ttctgtcaag gtgtacaagg atgataaata 2220 ggtgccaagt ggagcaccca agtgtgatga gccccctcac agtggaatgg agtgtgaagc 2280 tttatgacct cataaattga aggttatctt cagtcattgt tttatatatt ttacatgcat 2340 taatcctcat ataatcccaa gaggtaaatt agtataatta tccttcatta taggtgacaa 2400 agttgagaca cagaagaatc gaactcttaa ggcagacctt ggatttgaac caggcaacct 2460 ggctcagata tcagttttaa ttactacact ctgtactttc aaagatttgt aaacactttg 2520 acaatgcatg acaatttcaa gctatgaaga aacaaacaca atttttcaca atatctctca 2580 aatctaatag gtcctcacta tcaagattaa gttccaggct gatgacactg taaggccaca 2640 tggccagctg tgctggaggc ctggtcaagg tcagagcctg ggtttgcaga gaagcagaca 2700 aacagccaaa caaggagact tactctgtct tcatgactca ttccctctac cttttttctc 2760 ctagtccatc ctaaggtgac tgtgtatcct tcaaagaccc agcccctgca gcaccacaac 2820 ctcctggtct gttctgtgag tggtttctat ccaggcagca ttgaagtcag gtggttccgg 2880 aatggccagg aagagaagac tggggtggtg tccacaggcc tgatccacaa tggagactgg 2940 accttccaga ccctggtgat gctggaaaca gttcctcgga gtggagaggt ttacacctgc 3000 caagtggagc acccaagcgt gacaagccct ctcacagtgg aatggagtga gcagctttct 3060 gacttcataa atttctcacc caccaagaag gggactgtgc tcatccctga gtgtcaggtt 3120 tctcctctcc gacatcctat tttcatttgc tccatgttct catctccatc agcacaggtc 3180 actgggggta gccctgtagg tgtttctaga aacacctgta cctcctggag aagcagtctc 3240 gcctgccagg caggagaggc tgtccctctt ttgaacctcc ccatgatgtc acaggtcagg 3300 gtcacccacc ctccccgggc tccaggcact gcctctgggt ctgagactga gtttctggtg 3360 ctgttgatct gagttatttg ttgtgatctg ggaagaggag aagtgtaggg gccttcctga 3420 catgagggga gtccaatctc agctctgcct tttattagct ctgtcactct agacaaacta 3480 cttagcctca ttgagtctca ggctttctgt ggatcagatg ttgaactctt gccttacatc 3540 aaggctgtaa tatttgaatg agtttgatgt ctgaaccttg taactgttca gtgtgatttg 3600 aaatcctttt tttctccaga aatggctagt tattttagtt cttgtggggc agacttcttc 3660 cccattttca aagctctgaa tcttagagtc tcaattaaag aggttcaatt tggaataaac 3720 actaaacctg gcttcctctc tcaggagcac ggtctgaatc tgcacagagc aagatgctga 3780 gtggagtcgg gggctttgtg ctgggcctgc tcttccttgg ggccgggctg ttcatctact 3840 tcaggaatca gaaaggtgag gagcctttgg tagctggctc tctccatagg cttttctgga 3900 ggaggaacta tggctttgct gaggttagtt ctcagtatat gagtggccct gaataaagcc 3960 tttctttccc caaacggctc taatgtcctg ctaatccaga aatcatcagt gcatggttac 4020 tatgtgaaag cataatagct tgtggcctgc agagacaaga ggaaggttaa caagtagggg 4080 tcctttggtt tgagatcttg gagcagatta aggaagagcc actaagacta atggaattac 4140 actggatcct gtgacagaca cttcaccctt catgggtcac atggtctgtt tctgctcctc 4200 tctgccctgg ctggtgtggg ttgtagtgac agagaactct ccggtgggag atctggggct 4260 gggacattgt gttggaagac agatttgctt ccataaattt taagtgtata tattttcctc 4320 tttttcccag gacactctgg acttcagcca agaggtaata ccttttaatc ctcttttaga 4380 aacagatacg gtttccctag tgagaggtga agccagctgg acttctgggt cgggtaggga 4440 cttgcagaac tttcctgtct taggagaggt ttctaaatgc accaatcagt gctctgtaaa 4500 aacacaccaa ttggcactct gtggctagat agatgtttgt aaaatggact aatcagcact 4560 ctgtaaaatg gagcaatcca cactctgtaa aatggaccaa tcaatgctct ttaaaatgga 4620 ccaatcagca ggacatgggc ggggacaaat aagggaatac aagctggcca ccccagccag 4680 cagcagcaac ccgctcaggt cgccttccat gctgtggaag ctttgttctt ttgctcttca 4740 caataaatct tgctgttgct cactcttcgg gtctgtgcca cctttaagag ctgtaacact 4800 cactgtgaag attcgcggct tcattcttga agtcagcgaa accacgaacc caccggaagg 4860 aacaaactct ggacacacta gaattgatgg tagaggtgat aaggcatgag acagaaataa 4920 taggaaagac tttggatcca aatttctgat caggcaattt acaccaaaac tcctcctctc 4980 cacttagaaa aggcctgtgc tctgtgggac tattggctct gggagactca ggaacttgtt 5040 tttcttcttc ctgcagtgct ctcatctgag tccctgaaag agaggaaaag aaactgttag 5100 tagagtcagg ttgaaaacaa cactctcctc tgtcttttgc a 5141 // ID KX687276; SV 1; linear; genomic DNA; STD; HUM; 5136 BP. XX AC KX687276; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate DL9 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*13_05_01e1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5136 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-5136 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 73d5b0684cfa7dfafe1f685041ad405a. DR IMGT/HLA; HLA-DRB1*13:05:01; HLA00802. XX FH Key Location/Qualifiers FH FT source 1..5136 FT /organism="Homo sapiens" FT /isolate="DL9" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <244..>4349 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*13_05_01e1" FT mRNA join(<244..513,2760..3041,3740..3850,4326..>4349) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*13_05_01e1" FT /product="MHC class II antigen" FT CDS join(<244..513,2760..3041,3740..3850,4326..>4349) FT /codon_start=3 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*13_05_01e1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G199" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G199" FT /protein_id="AST15790.1" FT /translation="RFLEYSTSECHFFNGTERVRFLDRYFHNQEENVRFDSDVGEFRAV FT TELGRPDAEYWNSQKDFLEDRRAAVDTYCRHNYGVGESFTVQRRVHPKVTVYPSKTQPL FT QHHNLLVCSVSGFYPGSIEVRWFRNGQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSVTSPLTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGH FT SGLQPR" XX SQ Sequence 5136 BP; 1272 A; 1059 C; 1283 G; 1522 T; 0 other; tagggagggg ggtcccaaaa gcctggggat cagacgtggt tttcccgcct ggtcccccag 60 gccccctttc gcctcaggaa gacagaggag gagcccctgg gctgcaggtg gtgggcgttg 120 cggcgggggc cggttaaggt tcccagtgcc cgcacccggc ccagggagcc ccggatggcg 180 gcgtcactgt cagtgtcttc tcaggaggcc gcctgtgtga ctggatcgtt cgtgtcccca 240 cagcacgttt cttggagtac tctacgtctg agtgtcattt cttcaatggg acggagcggg 300 tgcggttcct ggacagatac ttccataacc aggaggagaa cgtgcgcttc gacagcgacg 360 tgggggagtt ccgggcggtg acggagctgg ggcggcctga tgccgagtac tggaacagcc 420 agaaggactt cctggaagac aggcgggccg cggtggacac ctactgcaga cacaactacg 480 gggttggtga gagcttcaca gtgcagcggc gaggtgagcg cggcgcgggg cggggcctga 540 gtccctgtga gctgggaatc tgagtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg 600 tgtgtgtgtg tgtgagagag agacagagag acagagagag agagagcgcc atctgtgagc 660 atttagaatc ctctctatcc tgagcaagga gttctgaggg cacaggtgtg tgtgtagagt 720 gtggatttgt ctgtgtctgt gaggctgttg tgggagggga ggcaggaggg ggctgcttct 780 tattcttgga ggactctgtg gggaggtgac aagggaggtg ggtgcgggcg gctggagaga 840 gaggtgacct tgattgtctc gggtccttag agatgcaggg aagggaaatg taaggggtgt 900 gtggttgggg tgaaggttta ggggaggaga gctgaggggt aaggaaggtt tgggataatg 960 tgaggaggcc agttccagac tgtccctggc acacaccctt catgtaatct ctgaaataaa 1020 agtgtgtgct gtttgtttgt aaaagcatta gattaatttc taggggaatt gaggagacct 1080 ctgaggcatc tctgaagctt ctttaggtct aaatttcttg ctagtttttt gttttttatt 1140 gtgtatattt ttacatagta gaaatgactg tgaaactaac tttttgaatt aaagttttaa 1200 cacagttact attttattat aatgctaata gttttctagt agttacatat tattctttta 1260 tatataatag ttgtgacaca acttacctca ctttcccctt tgttgacctt tattatgaca 1320 ttcaccaaaa tttgaaaatg tatgtttctg gttaattttt aatttatatt tttttcattt 1380 ataattcttt tgaattattt tgacctattt attggccagt tttaataact gctgtaagaa 1440 ttccctattg tatttggtag ggaatggaca atgatctact gcctaatatc tcgagggctt 1500 agtatttttc tcagtgactt tgtgggttct ttgtactgtg agattattaa cactttattg 1560 atatttgatt cagcatttgc tccagtttgt ggtttgtatg ttgattttga aaattctttt 1620 ccatgttaag aatttgaaca tttttatata ataaaatatg ttgcaaaatt tttattaatg 1680 atttacaatc catcttaaat ctgccatttt gtggtattgt tgtctccagg tttctcctta 1740 cttctaaaaa aaattgcatt tattgagagt ctgctagtgt tagggatttt cctgggcata 1800 agcaccccaa gtgacgagtc ccagacactg ccttaatcca aatgtgattc tggaaagaaa 1860 aatcatttta caatgatagg cctaataata attaagcttg tgttgcatgg gagatgcatt 1920 gatcagctaa atgtaaatat aagaactttc aaaactaaaa tgacgttcct taatccttct 1980 ctctgcttta tgactcatgc ttttctggga aagtaaaaat ttggagaatc atttctgtct 2040 gtcccacctt cccaggggca gaaccatttc tgtggtgttc taaggtgtga gtgcatggcg 2100 gtagtattcc taaaaattca tattcggttt cgtcatgtac ccaactctgt cccgttatct 2160 atcaacattg ttttaaatca tatatttctg tcaaggtgta caaggatgat aaataggtgc 2220 caagtggagc acccaagtgt gatgagcccc ctcacagtgg aatggagtgt gaagctttat 2280 gacctcataa attgaaggtt atcttcagtc attgttttat atattttaca tgcattaatc 2340 ctcatataat cccaagaggt aaattagtat aattatcctt cattataggt gacaaagttg 2400 agacacagaa gaatcgaact cttaaggcag accttggatt tgaaccaggc aacctggctc 2460 agatatcagt tttaattact acactctgta ctttcaaaga tttgtaaaca ctttgacaat 2520 gcatgacaat ttcaagctat gaagaaacaa acacaatttt tcacaatatc tctcaaatct 2580 aataggtcct cactatcaag attaagttcc aggctgatga cactgtaagg ccacatggcc 2640 agctgtgctg gaggcctggt caaggtcaga gcctgggttt gcagagaagc agacaaacag 2700 ccaaacaagg agacttactc tgtcttcatg actcattccc tctacctttt ttctcctagt 2760 ccatcctaag gtgactgtgt atccttcaaa gacccagccc ctgcagcacc acaacctcct 2820 ggtctgttct gtgagtggtt tctatccagg cagcattgaa gtcaggtggt tccggaatgg 2880 ccaggaagag aagactgggg tggtgtccac aggcctgatc cacaatggag actggacctt 2940 ccagaccctg gtgatgctgg aaacagttcc tcggagtgga gaggtttaca cctgccaagt 3000 ggagcaccca agcgtgacaa gccctctcac agtggaatgg agtgagcagc tttctgactt 3060 cataaatttc tcacccacca agaaggggac tgtgctcatc cctgagtgtc aggtttctcc 3120 tctccgacat cctattttca tttgctccat gttctcatct ccatcagcac aggtcactgg 3180 gggtagccct gtaggtgttt ctagaaacac ctgtacctcc tggagaagca gtctcgcctg 3240 ccaggcagga gaggctgtcc ctcttttgaa cctccccatg atgtcacagg tcagggtcac 3300 ccaccctccc cgggctccag gcactgcctc tgggtctgag actgagtttc tggtgctgtt 3360 gatctgagtt atttgttgtg atctgggaag aggagaagtg taggggcctt cctgacatga 3420 ggggagtcca atctcagctc tgccttttat tagctctgtc actctagaca aactacttag 3480 cctcattgag tctcaggctt tctgtggatc agatgttgaa ctcttgcctt acatcaaggc 3540 tgtaatattt gaatgagttt gatgtctgaa ccttgtaact gttcagtgtg atttgaaatc 3600 ctttttttct ccagaaatgg ctagttattt tagttcttgt ggggcagact tcttccccat 3660 tttcaaagct ctgaatctta gagtctcaat taaagaggtt caatttggaa taaacactaa 3720 acctggcttc ctctctcagg agcacggtct gaatctgcac agagcaagat gctgagtgga 3780 gtcgggggct ttgtgctggg cctgctcttc cttggggccg ggctgttcat ctacttcagg 3840 aatcagaaag gtgaggagcc tttggtagct ggctctctcc ataggctttt ctggaggagg 3900 aactatggct ttgctgaggt tagttctcag tatatgagtg gccctgaata aagcctttct 3960 ttccccaaac ggctctaatg tcctgctaat ccagaaatca tcagtgcatg gttactatgt 4020 gaaagcataa tagcttgtgg cctgcagaga caagaggaag gttaacaagt aggggtcctt 4080 tggtttgaga tcttggagca gattaaggaa gagccactaa gactaatgga attacactgg 4140 atcctgtgac agacacttca cccttcatgg gtcacatggt ctgtttctgc tcctctctgc 4200 cctggctggt gtgggttgta gtgacagaga actctccggt gggagatctg gggctgggac 4260 attgtgttgg aagacagatt tgcttccata aattttaagt gtatatattt tcctcttttt 4320 cccaggacac tctggacttc agccaagagg taataccttt taatcctctt ttagaaacag 4380 atacggtttc cctagtgaga ggtgaagcca gctggacttc tgggtcgggt agggacttgc 4440 agaactttcc tgtcttagga gaggtttcta aatgcaccaa tcagtgctct gtaaaaacac 4500 accaattggc actctgtggc tagatagatg tttgtaaaat ggactaatca gcactctgta 4560 aaatggagca atccacactc tgtaaaatgg accaatcaat gctctttaaa atggaccaat 4620 cagcaggaca tgggcgggga caaataaggg aatacaagct ggccacccca gccagcagca 4680 gcaacccgct caggtcgcct tccatgctgt ggaagctttg ttcttttgct cttcacaata 4740 aatcttgctg ttgctcactc ttcgggtctg tgccaccttt aagagctgta acactcactg 4800 tgaagattcg cggcttcatt cttgaagtca gcgaaaccac gaacccaccg gaaggaacaa 4860 actctggaca cactagaatt gatggtagag gtgataaggc atgagacaga aataatagga 4920 aagactttgg atccaaattt ctgatcaggc aatttacacc aaaactcctc ctctccactt 4980 agaaaaggcc tgtgctctgt gggactattg gctctgggag actcaggaac ttgtttttct 5040 tcttcctgca gtgctctcat ctgagtccct gaaagagagg aaaagaaact gttagtagag 5100 tcaggttgaa aacaacactc tcctctgtct tttgca 5136 // ID KX687277; SV 1; linear; genomic DNA; STD; HUM; 5130 BP. XX AC KX687277; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH30 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*14_02_01e1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5130 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-5130 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 9c5db6c2ed344aedde7157ce7c1cfa64. DR IMGT/HLA; HLA-DRB1*14:02:01:01; HLA00834. XX FH Key Location/Qualifiers FH FT source 1..5130 FT /organism="Homo sapiens" FT /isolate="IH30" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <244..>4343 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*14_02_01e1" FT mRNA join(<244..513,2754..3035,3734..3844,4320..>4343) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*14_02_01e1" FT /product="MHC class II antigen" FT CDS join(<244..513,2754..3035,3734..3844,4320..>4343) FT /codon_start=3 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*14_02_01e1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G192" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G192" FT /protein_id="AST15791.1" FT /translation="RFLEYSTSECHFFNGTERVRFLERYFHNQEENVRFDSDVGEYRAV FT TELGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVGESFTVQRRVHPKVTVYPSKTQPL FT QHHNLLVCSVSGFYPGSIEVRWFRNGQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSVTSPLTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGH FT SGLQPR" XX SQ Sequence 5130 BP; 1273 A; 1059 C; 1279 G; 1519 T; 0 other; tagggagggg ggtcccaaaa gcctggggat cagacgtggt tttcccgcct ggtcccccag 60 gccccctttc gcctcaggaa gacagaggag gagcccctgg gctgctggtg gtgggcgttg 120 cggcgggggc cggttaaggt tcccagtgcc cgcaccccac ccagggagcc ccggatggcg 180 gcgtcactgt cagtgtcttc tcaggaggcc gcctgtgtga ctggatcgtt cgtgtcccca 240 cagcacgttt cttggagtac tctacgtctg agtgtcattt cttcaatggg acggagcggg 300 tgcggttcct ggagagatac ttccataacc aggaggagaa cgtgcgcttc gacagcgacg 360 tgggggagta ccgggcggtg acggagctgg ggcggcctga tgccgagtac tggaacagcc 420 agaaggacct cctggagcag aggcgggccg cggtggacac ctactgcaga cacaactacg 480 gggttggtga gagcttcaca gtgcagcggc gaggtgagcg cggcgcgggg cggggcctga 540 gtccctgtga gctgggaatc tgagtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg 600 tgtgtgtgag agagagagac agagagacag agagagagag cgccatctgt gagcatttag 660 aatcctctct atcctgagca aggagttctg agggcacagg tgtgtgtgta gagtgtggat 720 ttgtctgtgt ctgtgaggct gttgtgggag gggaggcagg agggggctgc ttcttattct 780 tggaggactc tgtggggagg tgacaaggga ggtgggtgcg ggcggctgga gagagaggtg 840 accttgattg tctcgggtcc ttagagatgc agggaaggga aatgtaaggg gtgtgtggtt 900 ggggtgaagg tttaggggag gagagctgag gggtaaggaa ggtttgggat aatgtgagga 960 ggccagttcc agactgtccc tggcacacac ccttcatgta atctctgaaa taaaagtgtg 1020 tgctgtttgt ttgtaaaagc attagattaa tttctagggg aattgaggag acctctgagg 1080 catctctgaa gcttctttag gtctaaattt cttgctagtt ttttgttttt tattgtgtat 1140 atttttacat agtagaaatg actgtgaaac taactttttg aattaaagtt ttaacacagt 1200 tactatttta ttataatgct aatagttttc tagtagttac atattattct tttatatata 1260 atagttgtga cacaacttac ctcactttcc cctttgttga cctttattat gacattcacc 1320 aaaatttgaa aatgtatgtt tctggttaat ttttaattta tatttttttc atttataatt 1380 cttttgaatt attttgacct atttattggc cagttttaat aactgctgta agaattccct 1440 attgtatttg gtagggaatg gacaatgatc tactgcctaa tatctcgagg gcttagtatt 1500 tttctcagtg actttgtggg ttctttgtac tgtgagatta ttaacacttt attgatattt 1560 gattcagcat ttgctccagt ttgtggtttg tatgttgatt ttgaaaattc ttttccatgt 1620 taagaatttg aacattttta tataataaaa tatgttgcaa aatttttatt aatgatttac 1680 aatccatctt aaatctgcca ttttgtggta ttgttgtctc caggtttctc cttacttcta 1740 aaaaaaattg catttattga gagtctgcta gtgttaggga ttttcctggg cataagcacc 1800 ccaagtgacg agtcccagac actgccttaa tccaaatgtg attctggaaa gaaaaatcat 1860 tttacaatga taggcctaat aataattaag cttgtgttgc atgggagatg cattgatcag 1920 ctaaatgtaa atataagaac tttcaaaact aaaatgacgt tccttaatcc ttctctctgc 1980 tttatgactc atgcttttct gggaaagtaa aaatttggag aatcatttct gtctgtccca 2040 ccttcccagg ggcagaacca tttctgtggt gttctaaggt gtgagtgcat ggcggtagta 2100 ttcctaaaaa ttcatattcg gtttcgtcat gtacccaact ctgtcccgtt atctatcaac 2160 attgttttaa atcatatatt tctgtcaagg tgtacaagga tgataaatag gtgccaagtg 2220 gagcacccaa gtgtgatgag ccccctcaca gtggaatgga gtgtgaagct ttatgacctc 2280 ataaattgaa ggttatcttc aggcattgtt ttatatattt tacatgcatt aatcctcata 2340 taatcccaag aggtaaatta gtataattat ccttcattat aggtgacaaa gttgagacac 2400 agaagaatca aactcttaag gcagaccttg gatttgaacc aggcaacctg gctcagatat 2460 cagttttaat tactacactc tgtactttca aagatttgta aacactttga caatgcatga 2520 caatttcaag ctatgaagaa acaaacacaa tttttcacaa tatctctcaa atctaatagg 2580 tcctcactat caagattaag ttccaggctg atgacactgt aaggccacat ggccagctgt 2640 gctggaggcc tggtcaaggt cagagcctgg gtttgcagag aagcagacaa acagccaaac 2700 aaggagactt actctgtctt catgactcat tccctctacc ttttttctcc tagtccatcc 2760 taaggtgact gtgtatcctt caaagaccca gcccctgcag caccacaacc tcctggtctg 2820 ttctgtgagt ggtttctatc caggcagcat tgaagtcagg tggttccgga atggccagga 2880 agagaagact ggggtggtgt ccacaggcct gatccacaat ggagactgga ccttccagac 2940 cctggtgatg ctggaaacag ttcctcggag tggagaggtt tacacctgcc aagtggagca 3000 cccaagcgtg acaagccctc tcacagtgga atggagtgag cagctttctg acttcataaa 3060 tttctcaccc accaagaagg ggactgtgct catccctgag tgtcaggttt ctcctctccg 3120 acatcctatt ttcatttgct ccatgttctc atctccatca gcacaggtca ctgggggtag 3180 ccctgtaggt gtttctagaa acacctgtac ctcctggaga agcagtctcg cctgccaggc 3240 aggagaggct gtccctcttt tgaacctccc catgatgtca caggtcaggg tcacccaccc 3300 tccccgggct ccaggcactg cctctgggtc tgagactgag tttctggtgc tgttgatctg 3360 agttatttgt tgtgatctgg gaagaggaga agtgtagggg ccttcctgac atgaggggag 3420 tccaatctca gctctgcctt ttattagctc tgtcactcta gacaaactac ttagcctcat 3480 tgagtctcag gctttctgtg gatcagatgt tgaactcttg ccttacatca aggctgtaat 3540 atttgaatga gtttgatgtc tgaaccttgt aactgttcag tgtgatttga aatccttttt 3600 ttctccagaa atggctagtt attttagttc ttgtgggtca gacttcttcc ccattttcaa 3660 agctctgaat cttagagtct caattaaaga ggttcaattt ggaataaaca ctaaacctgg 3720 cttcctctct caggagcacg gtctgaatct gcacagagca agatgctgag tggagtcggg 3780 ggctttgtgc tgggcctgct cttccttggg gccgggctgt tcatctactt caggaatcag 3840 aaaggtgagg agcctttggt agctggctct ctccataggc ttttctggag gaggaactat 3900 ggctttgctg aggttagttc tcagtatatg agtggccctg aataaagcct ttctttcccc 3960 aaacggctct aatgtcctgc taatccagaa atcatcagtg catggttact atgtgaaagc 4020 ataatagctt gtggcctgca gagacaagag gaaggttaac aagtaggggt cctttggttt 4080 gagatcttgg agcagattaa ggaagagcca ctaagactaa tggaattaca ctggatcctg 4140 tgacagacac tttacccttc atgggtcaca tggtctgttt ctgctcctct ctgccctggc 4200 tggtgtgggt tgtagtgaca gagaactctc cggtgggaga tctggggctg ggacattgtg 4260 ttggaagaca gatttgcttc cataaatttt aagtgtatat attttcctct ttttcccagg 4320 acactctgga cttcagccaa gaggtaatac cttttaatcc tcttttagaa acagatacgg 4380 tttccctagt gagaggtgaa gccagctgga cttctgggtc gggtagggac ttgcagaact 4440 ttcctgtctt aggagaggtt tctaaatgca ccaatcagtg ctctgtaaaa acacaccaat 4500 tggcactctg tggctagata gatgtttgta aaatggacta atcagcactc tgtaaaatgg 4560 agcaatccac actctgtaaa atggaccaat caatgctctt taaaatggac caatcagcag 4620 gacatgggcg gggacaaata agggaataca agctggccac cccagccagc agcagcaacc 4680 cgctcaggtc gccttccatg ctgtggaagc tttgttcttt tgctcttcac aataaatctt 4740 gctgttgctc actcttcggg tctgtgccac ctttaagagc tgtaacactc actgtgaaga 4800 ttcgcggctt cattcttgaa gtcagcgaaa ccacgaaccc accggaagga acaaactctg 4860 gacacactag aattgatggt agaggtgata aggcatgaga cagaaataat aggaaagact 4920 ttggatccaa atttctgatc aggcaattta caccaaaact cctcctctcc acttagaaaa 4980 ggcctgtgct ctgtgggact attggctctg ggagactcag gaacttgttt ttcttcttcc 5040 tgcagtgctc tcatctgagt ccctgaaaga gaggaaaaga aactgttagt agagtcaggt 5100 tgaaaacaac actctcctct gtcttttgca 5130 // ID KX687278; SV 1; linear; genomic DNA; STD; HUM; 5126 BP. XX AC KX687278; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate CL2 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*14_06_01e1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5126 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-5126 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; b53f9bade6f53edbd55c48623db2a86d. DR IMGT/HLA; HLA-DRB1*14:06:01; HLA00838. XX FH Key Location/Qualifiers FH FT source 1..5126 FT /organism="Homo sapiens" FT /isolate="CL2" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <244..>4339 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*14_06_01e1" FT mRNA join(<244..513,2750..3031,3730..3840,4316..>4339) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*14_06_01e1" FT /product="MHC class II antigen" FT CDS join(<244..513,2750..3031,3730..3840,4316..>4339) FT /codon_start=3 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*14_06_01e1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1A0" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1A0" FT /protein_id="AST15792.1" FT /translation="RFLEYSTSECHFFNGTERVRFLERYFHNQEENVRFDSDVGEYRAV FT TELGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVVESFTVQRRVHPKVTVYPSKTQPL FT QHHNLLVCSVSGFYPGSIEVRWFRNGQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSVTSPLTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGH FT SGLQPR" XX SQ Sequence 5126 BP; 1273 A; 1059 C; 1277 G; 1517 T; 0 other; tagggagggg ggtcccaaaa gcctggggat cagacgtggt tttcccgcct ggtcccccag 60 gccccctttc gcctcaggaa gacagaggag gagcccctgg gctgctggtg gtgggcgttg 120 cggcgggggc cggttaaggt tcccagtgcc cgcaccccac ccagggagcc ccggatggcg 180 gcgtcactgt cagtgtcttc tcaggaggcc gcctgtgtga ctggatcgtt cgtgtcccca 240 cagcacgttt cttggagtac tctacgtctg agtgtcattt cttcaatggg acggagcggg 300 tgcggttcct ggagagatac ttccataacc aggaggagaa cgtgcgcttc gacagcgacg 360 tgggggagta ccgggcggtg acggagctgg ggcggcctga tgccgagtac tggaacagcc 420 agaaggacct cctggagcag aggcgggccg cggtggacac ctactgcaga cacaactacg 480 gggttgtgga gagcttcaca gtgcagcggc gaggtgagcg cggcgcgggg cggggcctga 540 gtccctgtga gctgggaatc tgagtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg 600 tgtgagagag agagacagag agacagagag agagagcgcc atctgtgagc atttagaatc 660 ctctctatcc tgagcaagga gttctgaggg cacaggtgtg tgtgtagagt gtggatttgt 720 ctgtgtctgt gaggctgttg tgggagggga ggcaggaggg ggctgcttct tattcttgga 780 ggactctgtg gggaggtgac aagggaggtg ggtgcgggcg gctggagaga gaggtgacct 840 tgattgtctc gggtccttag agatgcaggg aagggaaatg taaggggtgt gtggttgggg 900 tgaaggttta ggggaggaga gctgaggggt aaggaaggtt tgggataatg tgaggaggcc 960 agttccagac tgtccctggc acacaccctt catgtaatct ctgaaataaa agtgtgtgct 1020 gtttgtttgt aaaagcatta gattaatttc taggggaatt gaggagacct ctgaggcatc 1080 tctgaagctt ctttaggtct aaatttcttg ctagtttttt gttttttatt gtgtatattt 1140 ttacatagta gaaatgactg tgaaactaac tttttgaatt aaagttttaa cacagttact 1200 attttattat aatgctaata gttttctagt agttacatat tattctttta tatataatag 1260 ttgtgacaca acttacctca ctttcccctt tgttgacctt tattatgaca ttcaccaaaa 1320 tttgaaaatg tatgtttctg gttaattttt aatttatatt tttttcattt ataattcttt 1380 tgaattattt tgacctattt attggccagt tttaataact gctgtaagaa ttccctattg 1440 tatttggtag ggaatggaca atgatctact gcctaatatc tcgagggctt agtatttttc 1500 tcagtgactt tgtgggttct ttgtactgtg agattattaa cactttattg atatttgatt 1560 cagcatttgc tccagtttgt ggtttgtatg ttgattttga aaattctttt ccatgttaag 1620 aatttgaaca tttttatata ataaaatatg ttgcaaaatt tttattaatg atttacaatc 1680 catcttaaat ctgccatttt gtggtattgt tgtctccagg tttctcctta cttctaaaaa 1740 aaattgcatt tattgagagt ctgctagtgt tagggatttt cctgggcata agcaccccaa 1800 gtgacgagtc ccagacactg ccttaatcca aatgtgattc tggaaagaaa aatcatttta 1860 caatgatagg cctaataata attaagcttg tgttgcatgg gagatgcatt gatcagctaa 1920 atgtaaatat aagaactttc aaaactaaaa tgacgttcct taatccttct ctctgcttta 1980 tgactcatgc ttttctggga aagtaaaaat ttggagaatc atttctgtct gtcccacctt 2040 cccaggggca gaaccatttc tgtggtgttc taaggtgtga gtgcatggcg gtagtattcc 2100 taaaaattca tattcggttt cgtcatgtac ccaactctgt cccgttatct atcaacattg 2160 ttttaaatca tatatttctg tcaaggtgta caaggatgat aaataggtgc caagtggagc 2220 acccaagtgt gatgagcccc ctcacagtgg aatggagtgt gaagctttat gacctcataa 2280 attgaaggtt atcttcaggc attgttttat atattttaca tgcattaatc ctcatataat 2340 cccaagaggt aaattagtat aattatcctt cattataggt gacaaagttg agacacagaa 2400 gaatcaaact cttaaggcag accttggatt tgaaccaggc aacctggctc agatatcagt 2460 tttaattact acactctgta ctttcaaaga tttgtaaaca ctttgacaat gcatgacaat 2520 ttcaagctat gaagaaacaa acacaatttt tcacaatatc tctcaaatct aataggtcct 2580 cactatcaag attaagttcc aggctgatga cactgtaagg ccacatggcc agctgtgctg 2640 gaggcctggt caaggtcaga gcctgggttt gcagagaagc agacaaacag ccaaacaagg 2700 agacttactc tgtcttcatg actcattccc tctacctttt ttctcctagt ccatcctaag 2760 gtgactgtgt atccttcaaa gacccagccc ctgcagcacc acaacctcct ggtctgttct 2820 gtgagtggtt tctatccagg cagcattgaa gtcaggtggt tccggaatgg ccaggaagag 2880 aagactgggg tggtgtccac aggcctgatc cacaatggag actggacctt ccagaccctg 2940 gtgatgctgg aaacagttcc tcggagtgga gaggtttaca cctgccaagt ggagcaccca 3000 agcgtgacaa gccctctcac agtggaatgg agtgagcagc tttctgactt cataaatttc 3060 tcacccacca agaaggggac tgtgctcatc cctgagtgtc aggtttctcc tctccgacat 3120 cctattttca tttgctccat gttctcatct ccatcagcac aggtcactgg gggtagccct 3180 gtaggtgttt ctagaaacac ctgtacctcc tggagaagca gtctcgcctg ccaggcagga 3240 gaggctgtcc ctcttttgaa cctccccatg atgtcacagg tcagggtcac ccaccctccc 3300 cgggctccag gcactgcctc tgggtctgag actgagtttc tggtgctgtt gatctgagtt 3360 atttgttgtg atctgggaag aggagaagtg taggggcctt cctgacatga ggggagtcca 3420 atctcagctc tgccttttat tagctctgtc actctagaca aactacttag cctcattgag 3480 tctcaggctt tctgtggatc agatgttgaa ctcttgcctt acatcaaggc tgtaatattt 3540 gaatgagttt gatgtctgaa ccttgtaact gttcagtgtg atttgaaatc ctttttttct 3600 ccagaaatgg ctagttattt tagttcttgt gggtcagact tcttccccat tttcaaagct 3660 ctgaatctta gagtctcaat taaagaggtt caatttggaa taaacactaa acctggcttc 3720 ctctctcagg agcacggtct gaatctgcac agagcaagat gctgagtgga gtcgggggct 3780 ttgtgctggg cctgctcttc cttggggccg ggctgttcat ctacttcagg aatcagaaag 3840 gtgaggagcc tttggtagct ggctctctcc ataggctttt ctggaggagg aactatggct 3900 ttgctgaggt tagttctcag tatatgagtg gccctgaata aagcctttct ttccccaaac 3960 ggctctaatg tcctgctaat ccagaaatca tcagtgcatg gttactatgt gaaagcataa 4020 tagcttgtgg cctgcagaga caagaggaag gttaacaagt aggggtcctt tggtttgaga 4080 tcttggagca gattaaggaa gagccactaa gactaatgga attacactgg atcctgtgac 4140 agacacttta cccttcatgg gtcacatggt ctgtttctgc tcctctctgc cctggctggt 4200 gtgggttgta gtgacagaga actctccggt gggagatctg gggctgggac attgtgttgg 4260 aagacagatt tgcttccata aattttaagt gtatatattt tcctcttttt cccaggacac 4320 tctggacttc agccaagagg taataccttt taatcctctt ttagaaacag atacggtttc 4380 cctagtgaga ggtgaagcca gctggacttc tgggtcgggt agggacttgc agaactttcc 4440 tgtcttagga gaggtttcta aatgcaccaa tcagtgctct gtaaaaacac accaattggc 4500 actctgtggc tagatagatg tttgtaaaat ggactaatca gcactctgta aaatggagca 4560 atccacactc tgtaaaatgg accaatcaat gctctttaaa atggaccaat cagcaggaca 4620 tgggcgggga caaataaggg aatacaagct ggccacccca gccagcagca gcaacccgct 4680 caggtcgcct tccatgctgt ggaagctttg ttcttttgct cttcacaata aatcttgctg 4740 ttgctcactc ttcgggtctg tgccaccttt aagagctgta acactcactg tgaagattcg 4800 cggcttcatt cttgaagtca gcgaaaccac gaacccaccg gaaggaacaa actctggaca 4860 cactagaatt gatggtagag gtgataaggc atgagacaga aataatagga aagactttgg 4920 atccaaattt ctgatcaggc aatttacacc aaaactcctc ctctccactt agaaaaggcc 4980 tgtgctctgt gggactattg gctctgggag actcaggaac ttgtttttct tcttcctgca 5040 gtgctctcat ctgagtccct gaaagagagg aaaagaaact gttagtagag tcaggttgaa 5100 aacaacactc tcctctgtct tttgca 5126 // ID KX687279; SV 1; linear; genomic DNA; STD; HUM; 5128 BP. XX AC KX687279; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH9 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*14_13e1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5128 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-5128 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 0c018215c963d381de914a8b4c86b2d6. XX FH Key Location/Qualifiers FH FT source 1..5128 FT /organism="Homo sapiens" FT /isolate="IH9" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <244..>4341 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*14_13e1" FT mRNA join(<244..513,2752..3033,3732..3842,4318..>4341) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*14_13e1" FT /product="MHC class II antigen" FT CDS join(<244..513,2752..3033,3732..3842,4318..>4341) FT /codon_start=3 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*14_13e1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1D0" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1D0" FT /protein_id="AST15793.1" FT /translation="RFLEYSTSECHFFNGTERVRFLERYFHNQEENVRFDSDVGEYRAV FT TELGRPSAEYWNSQKDLLEQRRAAVDTYCRHNYGVGESFTVQRRVHPKVTVYPSKTQPL FT QHHNLLVCSVSGFYPGSIEVRWFRNGQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSVTSPLTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGH FT SGLQPR" XX SQ Sequence 5128 BP; 1273 A; 1060 C; 1278 G; 1517 T; 0 other; tagggagggg ggtcccaaaa gcctggggat cagacgtggt tttcccgcct ggtcccccag 60 gccccctttc gcctcaggaa gacagaggag gagcccctgg gctgctggtg gtgggcgttg 120 cggcgggggc cggttaaggt tcccagtgcc cgcaccccac ccagggagcc ccggatggcg 180 gcgtcactgt cagtgtcttc tcaggaggcc gcctgtgtga ctggatcgtt cgtgtcccca 240 cagcacgttt cttggagtac tctacgtctg agtgtcattt cttcaatggg acggagcggg 300 tgcggttcct ggagagatac ttccataacc aggaggagaa cgtgcgcttc gacagcgacg 360 tgggggagta ccgggcggtg acggagctgg ggcggcctag cgccgagtac tggaacagcc 420 agaaggacct cctggagcag aggcgggccg cggtggacac ctactgcaga cacaactacg 480 gggttggtga gagcttcaca gtgcagcggc gaggtgagcg cggcgcgggg cggggcctga 540 gtccctgtga gctgggaatc tgagtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg 600 tgtgtgagag agagagacag agagacagag agagagagcg ccatctgtga gcatttagaa 660 tcctctctat cctgagcaag gagttctgag ggcacaggtg tgtgtgtaga gtgtggattt 720 gtctgtgtct gtgaggctgt tgtgggaggg gaggcaggag ggggctgctt cttattcttg 780 gaggactctg tggggaggtg acaagggagg tgggtgcggg cggctggaga gagaggtgac 840 cttgattgtc tcgggtcctt agagatgcag ggaagggaaa tgtaaggggt gtgtggttgg 900 ggtgaaggtt taggggagga gagctgaggg gtaaggaagg tttgggataa tgtgaggagg 960 ccagttccag actgtccctg gcacacaccc ttcatgtaat ctctgaaata aaagtgtgtg 1020 ctgtttgttt gtaaaagcat tagattaatt tctaggggaa ttgaggagac ctctgaggca 1080 tctctgaagc ttctttaggt ctaaatttct tgctagtttt ttgtttttta ttgtgtatat 1140 ttttacatag tagaaatgac tgtgaaacta actttttgaa ttaaagtttt aacacagtta 1200 ctattttatt ataatgctaa tagttttcta gtagttacat attattcttt tatatataat 1260 agttgtgaca caacttacct cactttcccc tttgttgacc tttattatga cattcaccaa 1320 aatttgaaaa tgtatgtttc tggttaattt ttaatttata tttttttcat ttataattct 1380 tttgaattat tttgacctat ttattggcca gttttaataa ctgctgtaag aattccctat 1440 tgtatttggt agggaatgga caatgatcta ctgcctaata tctcgagggc ttagtatttt 1500 tctcagtgac tttgtgggtt ctttgtactg tgagattatt aacactttat tgatatttga 1560 ttcagcattt gctccagttt gtggtttgta tgttgatttt gaaaattctt ttccatgtta 1620 agaatttgaa catttttata taataaaata tgttgcaaaa tttttattaa tgatttacaa 1680 tccatcttaa atctgccatt ttgtggtatt gttgtctcca ggtttctcct tacttctaaa 1740 aaaaattgca tttattgaga gtctgctagt gttagggatt ttcctgggca taagcacccc 1800 aagtgacgag tcccagacac tgccttaatc caaatgtgat tctggaaaga aaaatcattt 1860 tacaatgata ggcctaataa taattaagct tgtgttgcat gggagatgca ttgatcagct 1920 aaatgtaaat ataagaactt tcaaaactaa aatgacgttc cttaatcctt ctctctgctt 1980 tatgactcat gcttttctgg gaaagtaaaa atttggagaa tcatttctgt ctgtcccacc 2040 ttcccagggg cagaaccatt tctgtggtgt tctaaggtgt gagtgcatgg cggtagtatt 2100 cctaaaaatt catattcggt ttcgtcatgt acccaactct gtcccgttat ctatcaacat 2160 tgttttaaat catatatttc tgtcaaggtg tacaaggatg ataaataggt gccaagtgga 2220 gcacccaagt gtgatgagcc ccctcacagt ggaatggagt gtgaagcttt atgacctcat 2280 aaattgaagg ttatcttcag gcattgtttt atatatttta catgcattaa tcctcatata 2340 atcccaagag gtaaattagt ataattatcc ttcattatag gtgacaaagt tgagacacag 2400 aagaatcaaa ctcttaaggc agaccttgga tttgaaccag gcaacctggc tcagatatca 2460 gttttaatta ctacactctg tactttcaaa gatttgtaaa cactttgaca atgcatgaca 2520 atttcaagct atgaagaaac aaacacaatt tttcacaata tctctcaaat ctaataggtc 2580 ctcactatca agattaagtt ccaggctgat gacactgtaa ggccacatgg ccagctgtgc 2640 tggaggcctg gtcaaggtca gagcctgggt ttgcagagaa gcagacaaac agccaaacaa 2700 ggagacttac tctgtcttca tgactcattc cctctacctt ttttctccta gtccatccta 2760 aggtgactgt gtatccttca aagacccagc ccctgcagca ccacaacctc ctggtctgtt 2820 ctgtgagtgg tttctatcca ggcagcattg aagtcaggtg gttccggaat ggccaggaag 2880 agaagactgg ggtggtgtcc acaggcctga tccacaatgg agactggacc ttccagaccc 2940 tggtgatgct ggaaacagtt cctcggagtg gagaggttta cacctgccaa gtggagcacc 3000 caagcgtgac aagccctctc acagtggaat ggagtgagca gctttctgac ttcataaatt 3060 tctcacccac caagaagggg actgtgctca tccctgagtg tcaggtttct cctctccgac 3120 atcctatttt catttgctcc atgttctcat ctccatcagc acaggtcact gggggtagcc 3180 ctgtaggtgt ttctagaaac acctgtacct cctggagaag cagtctcgcc tgccaggcag 3240 gagaggctgt ccctcttttg aacctcccca tgatgtcaca ggtcagggtc acccaccctc 3300 cccgggctcc aggcactgcc tctgggtctg agactgagtt tctggtgctg ttgatctgag 3360 ttatttgttg tgatctggga agaggagaag tgtaggggcc ttcctgacat gaggggagtc 3420 caatctcagc tctgcctttt attagctctg tcactctaga caaactactt agcctcattg 3480 agtctcaggc tttctgtgga tcagatgttg aactcttgcc ttacatcaag gctgtaatat 3540 ttgaatgagt ttgatgtctg aaccttgtaa ctgttcagtg tgatttgaaa tccttttttt 3600 ctccagaaat ggctagttat tttagttctt gtgggtcaga cttcttcccc attttcaaag 3660 ctctgaatct tagagtctca attaaagagg ttcaatttgg aataaacact aaacctggct 3720 tcctctctca ggagcacggt ctgaatctgc acagagcaag atgctgagtg gagtcggggg 3780 ctttgtgctg ggcctgctct tccttggggc cgggctgttc atctacttca ggaatcagaa 3840 aggtgaggag cctttggtag ctggctctct ccataggctt ttctggagga ggaactatgg 3900 ctttgctgag gttagttctc agtatatgag tggccctgaa taaagccttt ctttccccaa 3960 acggctctaa tgtcctgcta atccagaaat catcagtgca tggttactat gtgaaagcat 4020 aatagcttgt ggcctgcaga gacaagagga aggttaacaa gtaggggtcc tttggtttga 4080 gatcttggag cagattaagg aagagccact aagactaatg gaattacact ggatcctgtg 4140 acagacactt tacccttcat gggtcacatg gtctgtttct gctcctctct gccctggctg 4200 gtgtgggttg tagtgacaga gaactctccg gtgggagatc tggggctggg acattgtgtt 4260 ggaagacaga tttgcttcca taaattttaa gtgtatatat tttcctcttt ttcccaggac 4320 actctggact tcagccaaga ggtaatacct tttaatcctc ttttagaaac agatacggtt 4380 tccctagtga gaggtgaagc cagctggact tctgggtcgg gtagggactt gcagaacttt 4440 cctgtcttag gagaggtttc taaatgcacc aatcagtgct ctgtaaaaac acaccaattg 4500 gcactctgtg gctagataga tgtttgtaaa atggactaat cagcactctg taaaatggag 4560 caatccacac tctgtaaaat ggaccaatca atgctcttta aaatggacca atcagcagga 4620 catgggcggg gacaaataag ggaatacaag ctggccaccc cagccagcag cagcaacccg 4680 ctcaggtcgc cttccatgct gtggaagctt tgttcttttg ctcttcacaa taaatcttgc 4740 tgttgctcac tcttcgggtc tgtgccacct ttaagagctg taacactcac tgtgaagatt 4800 cgcggcttca ttcttgaagt cagcgaaacc acgaacccac cggaaggaac aaactctgga 4860 cacactagaa ttgatggtag aggtgataag gcatgagaca gaaataatag gaaagacttt 4920 ggatccaaat ttctgatcag gcaatttaca ccaaaactcc tcctctccac ttagaaaagg 4980 cctgtgctct gtgggactat tggctctggg agactcagga acttgttttt cttcttcctg 5040 cagtgctctc atctgagtcc ctgaaagaga ggaaaagaaa ctgttagtag agtcaggttg 5100 aaaacaacac tctcctctgt cttttgca 5128 // ID KX687280; SV 1; linear; genomic DNA; STD; HUM; 5144 BP. XX AC KX687280; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate S2 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*14_152Ne1 null allele, partial sequence. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5144 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-5144 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; d8337de255b8e9560054fdf24aafe6c0. DR IMGT/HLA; HLA-DRB1*14:152N; HLA11710. XX FH Key Location/Qualifiers FH FT source 1..5144 FT /organism="Homo sapiens" FT /isolate="S2" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>5144 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*14_152Ne1 null" FT /note="MHC class II antigen" XX SQ Sequence 5144 BP; 1274 A; 1055 C; 1290 G; 1525 T; 0 other; tagggagggg ggtcccaaaa gcctggggat cagacgtggt tttcccgcct ggtccctcag 60 gccccctttc gcctcaggaa gacagaggag gagcccctgg gctgcagatg gtgggcgttg 120 cggcgggggc cggttaaggt tcccagtgcc tgcaccccgc ccagggagcc ccggatggtg 180 gcgtcactgt cagtgtcttc tcaggaggcc gcctgtgtga ctggatcgtt cgtgtcccca 240 cagcacgttt cttggagtac tctacgggtg agtgttattt cttcaatggg acggagcggg 300 tgcggttcct ggacagatac ttccataacc aggaggagtt cgtgcgcttc gacagcgacg 360 tgggggagta ccgggcggtg acggagctgg ggcggcctgc tgcggagcac tggaacagcc 420 agaaggacct cctggagcag aagcggggcc gaggtggaca cctattgcag acacaactac 480 ggggttgtgg agagcttcac agtgcagcgg cgaggtgagc gcggcgcggg gcggggcctg 540 agtccctgtg agctgggaat ctgagtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt 600 gtgtgtgtgt gtgagagaga gagagagaga gagagacaga gagagagaga gcgccatctg 660 tgagcattta gaatcctctc tatcctgagc aaggagttct gagggcacag gtgtgtgtgt 720 agagtgtgga tttgtctgtg tctgtgaggc tgttgtggga ggggaggcag gagggggctg 780 cttcttattc ttggaggact ctgtggggag gtgacaaggg aggtgggtgc gggcggctgg 840 agagagaggt gaccttgatt gtcctgggtc cttagagatg cagggaaggg aaatgtaagg 900 ggtgtgtggt tggggtgaag gtttagggga ggagagctga ggggtaagga aggtttggga 960 taatgtgagg aggccggttc cagactgtcc ctggcacaca cccttcatgt aatctctgaa 1020 ataaaagtgt gtgctgtttg tttgtaaaag cattagatta atttctaggg gaattgagga 1080 gacctctgag gcatctctga agcttcttta ggtctaaatt tcttgctagt tttttgtttt 1140 ttattgtgta tatttttaca tagtagaaat gactgtgaaa ctaacttttt gaattaaagt 1200 tttaacacag ttactatttt attataatgc taatagtttt ctagtagtta catattattc 1260 ttttatatat aatagttgtg acacaactta cctcactttc ccctttgttg acctttatta 1320 tgacattcac caaaagttga aaatgtatgt ttctggttaa tttttaattt atattttttt 1380 catttataat tcttttgaat tattttgacc tatttattgg ccagttttaa taactgctgt 1440 aagaattccc tattgtattt ggtagggaat ggacaatgat ctactgccta atatctcgag 1500 ggcttagtat ttttctcagt gactttgtgg gttctttgta ctgtgagatt attaacactt 1560 tattgatatt tgattcagca tttgctccag tttgtggttt gtatgttgat tttgaaaatt 1620 cttttccatg ttaagaattt gaacattttt atataataaa atatgttgca aaatttttat 1680 taatgattta caatccatct taaatctgcc attttgtggt attgttgtct ccaggtttct 1740 ccttacttct aaaaaaaatt gcatttattg agagtctgct agtgttaggg attttcctgg 1800 gcataagcac cccaagtgac gagtcccaga cactgcctta atccaaatgt gattctggaa 1860 agaaaaatca ttttacaatg ataggcctaa taataattaa gcttgtgttg catgggagat 1920 gcattgatca gctaaatgta aatataagaa ctttcaaaac taaaatgacg ttccttaatc 1980 cttctctctg ctttatgaat catgcttttc tgggaaagta aaaatttgga gaatcatttc 2040 tgtctgtccc accttcccag gggcagaacc atttctgtag tgttctaagg tgtgagtgca 2100 tggcagtagt attcctaaaa attcatattc ggtttcgtca tgtacccaac tctgtcccgt 2160 tatctatcca cattgtttta aatcatatat ttctgtcaag gtgtacaagg atgataaata 2220 ggtgccaagt ggagcaccca agtgtgatga gccccctcac agtggaatgg agtgtgaagc 2280 tttatgacct cataaattga aggttatctt cagtcattgt tttatatatt ttacatgcat 2340 taatcctcat ataatcccaa gaggtaaatt agtataatta tccttcatta taggtgacaa 2400 agttgagaca cagaagaatc aaactcttaa ggcagacctt ggatttgaac caggcaacct 2460 ggctcagata tccgttttaa ttactacact ctgtactttc aaagatttgt aaacactttg 2520 acaatgcatg acaatttcaa gctatgaaga aacaaacaca atttttcaca atatctctca 2580 aatctaatgg gtcctcacta tcaagattaa gttccaggct gatgacactg taaggccaca 2640 tggccagctg tgctggaggc ctggtcaagg tcagagcctg ggtttgcaga gaagcagaca 2700 aacagccaaa caaggagact tactctgtct tcatgactca ttccctctac cttttttctc 2760 ctagtccatc ctaaggtgac tgtgtatcct tcaaagaccc agcccctgca gcaccacaac 2820 ctgctggtct gttctgtgag tggtttctat ccaggcagca ttgaagtcag gtggttccgg 2880 aatggccagg aagagaagac tggggtggtg tccacaggcc tgatccacaa tggagactgg 2940 accttccaga ccctggtgat gctggaaaca gttcctcgga gtggagaggt ttacacctgc 3000 caagtggagc acccaagcgt gacaagccct ctcacagtgg aatggagtga gcagctttct 3060 gacttcataa atttctcacc caccaagaag gggactgtgc tcatccctga gtgtcaggtt 3120 tctcctctcc gacatcctat tttcatttgc tccatgttct catctccatc agcacaggtc 3180 actgggggta gccctgtagg tgtttctaga aacacctgta cctcctggag aagcagtctc 3240 gcctgccagg caggagaggc tgtccctctt ttgaacctcc ccatgatgtc acaggtcagg 3300 gtcacccacc ctccccgggc tccaggcact gcctctgggt ctgagactga gtttctggtg 3360 ctgttgatct gagttatttg ttgtgatctg ggaagaggag aagtgtaggg gccttcctga 3420 catgagggga gtccaatctc agctctgcct tttattagct ctgtcactct agacaaacta 3480 cttagcctca ttgagtctca ggctttctgt ggatcagatg ttgaactctt gccttacatc 3540 aaggctgtaa tatttgaatg agtttgatgt ctgaaccttg taactgttca gtgtgatttg 3600 aaatcctttt tttctccaga aatggctagt tattttagtt cttgtggggc agacttcttc 3660 cccattttca aagctctgaa tcttagagtc tcaattaaag aggttcaatt tggaataagc 3720 atcactaaac ctggcttcct ctctcaggag cacggtctga atctgcacag agcaagatgc 3780 tgagtggagt cgggggcttt gtgctgggcc tgctcttcct tggggccggg ctgttcatct 3840 acttcaggaa tcagaaaggt gaggagcctt tggtagctgg ctctctccat aggcttttct 3900 ggaggaggaa ctatggcttt gctgaggtta gttctcagta tatgagtggc cctgaataaa 3960 gcctttcttt ccccaaacgg ctctaatgtc ctgctaatcc agaaatcatc agtgcatggt 4020 tactatgtga aagcataata gcttgtggcc tgcagagaca agaggaaggt taacaagtag 4080 gggtcctttg gtttgagatc ttggagcaga ttaaggaaga gccactaaga ctaatggaat 4140 tacactggat cctgtgacag acacttcacc cttcatgggt cacatggtct gtttctgctc 4200 ctctctgccc tggctggtgt gggttgtagt gacagagaac tctccggtgg gagatctggg 4260 gctgggacat tgtgttggaa gacagatttg cttccataaa ttttaagtgt atatattttc 4320 ctctttttcc caggacactc tggacttcag ccaagaggta atacctttta atcctctttt 4380 agaaacagat acggtttccc tagtgagagg tgaagccagc tggacttctg ggtcgggtag 4440 ggacttgcag aacttttctg tcttaggaga ggtttctaaa tgcaccaatc agtgctctgt 4500 aaaaacacac ccattggcac tctgtggcta gatagatgtt tgtaaaatgg actaatcagc 4560 actctgtaaa atggagcaat ccacactctg taaaatgggc caatcaatgc tctttaaaat 4620 ggaccaatca gcaggacatg ggcggggaca aataagggaa tacaagctgg ccaccccagc 4680 cagcagcagc aacccgctca ggtcgccttc catgctgtgg aagctttgtt cttttgctct 4740 tcacaataaa tcttgctgtt gctcactctt cgggtctgtg ccacctttaa gagctgtaac 4800 actcactgtg aagattcgcg gcttcattct tgaagtcagc aaaaccacga acccaccgga 4860 aggaacaaac tctggacaca ctagaattga tggtagaggt gataaggcat gagacagaaa 4920 taataggaaa gactttggat ccaaatttct gatcaggcaa tttacaccaa aactcctcct 4980 ctccacttag aaaaggcctg tgctctgtgg gactattggc tctgggagac tcaggaactt 5040 gtttttcttc ttcctgcagt gctctcatct gagtccctga aagagaggaa aagaaactgt 5100 tagtagagtc aggttgaaaa caacactctc ctctgtcttt tgca 5144 // ID KX687281; SV 1; linear; genomic DNA; STD; HUM; 5139 BP. XX AC KX687281; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH13 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*14_17e1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5139 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-5139 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 875e3a08dc49a8927bde3dc9e1135e13. DR IMGT/HLA; HLA-DRB1*14:17; HLA00849. XX FH Key Location/Qualifiers FH FT source 1..5139 FT /organism="Homo sapiens" FT /isolate="IH13" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <239..>4352 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*14_17e1" FT mRNA join(<239..508,2763..3044,3743..3853,4329..>4352) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*14_17e1" FT /product="MHC class II antigen" FT CDS join(<239..508,2763..3044,3743..3853,4329..>4352) FT /codon_start=3 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*14_17e1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1A2" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1A2" FT /protein_id="AST15794.1" FT /translation="RFLEYSTSECHFFNGTERVRFLDRYFHNQEENVRFDSDVGEFRAV FT TELGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVVESFTVQRRVHPKVTVYPSKTQPL FT QHHNLLVCSVSGFYPGSIEVRWFRNGQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSVTSPLTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGH FT SGLQPR" XX SQ Sequence 5139 BP; 1275 A; 1063 C; 1282 G; 1519 T; 0 other; aggggggtcc caaaagcctg gggatcagac gtggttttcc cgcctggtcc cccaggcccc 60 ctttcgcctc aggaagacag aggaggagcc cctgggctgc aggtggtggg cgttgcggcg 120 gcggccggtt aaggttccca gtgcccgcac ccggcccagg gagccccgga tggcggcgtc 180 actgtcagtg tcttctcagg aggccgcctg tgtgactgga tcgttcgtgt ccccacagca 240 cgtttcttgg agtactctac gtctgagtgt catttcttca atgggacgga gcgggtgcgg 300 ttcctggaca gatacttcca taaccaggag gagaacgtgc gcttcgacag cgacgtgggg 360 gagttccggg cggtgacgga gctggggcgg cctgatgccg agtactggaa cagccagaag 420 gacctcctgg agcagaggcg ggccgcggtg gacacctact gcagacacaa ctacggggtt 480 gtggagagct tcacagtgca gcggcgaggt gagcgcggcg cggggcgggg cctgagtccc 540 tgtgagctgg gaatctgagt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt 600 gtgtgagaga gagagagaga gagagacaga gagacagaga gagagagagc gccatctgtg 660 agcatttaga atcctctcta tcctgagcaa ggagttctga gggcacaggt gtgtgtgtag 720 agtgtggatt tgtctgtgtc tgtgaggctg ttgtgggagg ggaggcagga gggggctgct 780 tcttattctt ggaggactct gtggggaggt gacaagggag gtgggtgcgg gcggctggag 840 agagaggtga ccttgattgt ctcgggtcct tagagatgca gggaagggaa atgtaagggg 900 tgtgtggttg gggtgaaggt ttaggggagg agagctgagg ggtaaggaag gtttgggata 960 atgtgaggag gccagttcca gactgtccct ggcacacacc cttcatgtaa tctctgaaat 1020 aaaagtgtgt gctgtttgtt tgtaaaagca ttagattaat ttctagggga attgaggaga 1080 cctctgaggc atctctgaag cttctttagg tctaaatttc ttgctagttt tttgtttttt 1140 attgtgtata tttttacata gtagaaatga ctgtgaaact aactttttga attaaagttt 1200 taacacagtt actattttat tataatgcta atagttttct agtagttaca tattattctt 1260 ttatatataa tagttgtgac acaacttacc tcactttccc ctttgttgac ctttattatg 1320 acattcacca aaatttgaaa atgtatgttt ctggttaatt tttaatttat atttttttca 1380 tttataattc ttttgaatta ttttgaccta tttattggcc agttttaata actgctgtaa 1440 gaattcccta ttgtatttgg tagggaatgg acaatgatct actgcctaat atctcgaggg 1500 cttagtattt ttctcagtga ctttgtgggt tctttgtact gtgagattat taacacttta 1560 ttgatatttg attcagcatt tgctccagtt tgtggtttgt atgttgattt tgaaaattct 1620 tttccatgtt aagaatttga acatttttat ataataaaat atgttgcaaa atttttatta 1680 atgatttaca atccatctta aatctgccat tttgtggtat tgttgtctcc aggtttctcc 1740 ttacttctaa aaaaaattgc atttattgag agtctgctag tgttagggat tttcctgggc 1800 ataagcaccc caagtgacga gtcccagaca ctgccttaat ccaaatgtga ttctggaaag 1860 aaaaatcatt ttacaatgat aggcctaata ataattaagc ttgtgttgca tgggagatgc 1920 attgatcagc taaatgtaaa tataagaact ttcaaaacta aaatgacgtt ccttaatcct 1980 tctctctgct ttatgactca tgcttttctg ggaaagtaaa aatttggaga atcatttctg 2040 tctgtcccac cttcccaggg gcagaaccat ttctgtggtg ttctaaggtg tgagtgcatg 2100 gcggtagtat tcctaaaaat tcatattcgg tttcgtcatg tacccaactc tgtcccgtta 2160 tctatcaaca ttgttttaaa tcatatattt ctgtcaaggt gtacaaggat gataaatagg 2220 tgccaagtgg agcacccaag tgtgatgagc cccctcacag tggaatggag tgtgaagctt 2280 tatgacctca taaattgaag gttatcttca gtcattgttt tatatatttt acatgcatta 2340 atcctcatat aatcccaaga ggtaaattag tataattatc cttcattata ggtgacaaag 2400 ttgagacaca gaagaatcaa actcttaagg cagaccttgg atttgaacca ggcaacctgg 2460 ctcagatatc agttttaatt actacactct gtactttcaa agatttgtaa acactttgac 2520 aatgcatgac aatttcaagc tatgaagaaa caaacacaat ttttcacaat atctctcaaa 2580 tctaataggt cctcactatc aagattaagt tccaggctga tgacactgta aggccacatg 2640 gccagctgtg ctggaggcct ggtcaaggtc agagcctggg tttgcagaga agcagacaaa 2700 cagccaaaca aggagactta ctctgtcttc atgactcatt ccctctacct tttttctcct 2760 agtccatcct aaggtgactg tgtatccttc aaagacccag cccctgcagc accacaacct 2820 cctggtctgt tctgtgagtg gtttctatcc aggcagcatt gaagtcaggt ggttccggaa 2880 tggccaggaa gagaagactg gggtggtgtc cacaggcctg atccacaatg gagactggac 2940 cttccagacc ctggtgatgc tggaaacagt tcctcggagt ggagaggttt acacctgcca 3000 agtggagcac ccaagcgtga caagccctct cacagtggaa tggagtgagc agctttctga 3060 cttcataaat ttctcaccca ccaagaaggg gactgtgctc atccctgagt gtcaggtttc 3120 tcctctccga catcctattt tcatttgctc catgttctca tctccatcag cacaggtcac 3180 tgggggtagc cctgtaggtg tttctagaaa cacctgtacc tcctggagaa gcagtctcgc 3240 ctgccaggca ggagaggctg tccctctttt gaacctcccc atgatgtcac aggtcagggt 3300 cacccaccct ccccgggctc caggcactgc ctctgggtct gagactgagt ttctggtgct 3360 gttgatctga gttatttgtt gtgatctggg aagaggagaa gtgtatgggc cttcctgaca 3420 tgaggggagt ccaatctcag ctctgccttt tattagctct gtcactctag acaaactact 3480 tagcctcatt gagtctcagg ctttctgtgg atcagatgtt gaactcttgc cttacatcaa 3540 ggctgtaata tttgaatgag tttgatgtct gaaccttgta actgttcagt gtgatttgaa 3600 atcctttttt tctccagaaa tggctagtta ttttagttct tgtggggcag ccttcttccc 3660 cattttcaaa gctctgaatc ttagagtctc aattaaagag gttcaatttg gaataaacac 3720 taaacctggc ttcctctctc aggagcacgg tctgaatctg cacagagcaa gatgctgagt 3780 ggagtcgggg gctttgtgct gggcctgctc ttccttgggg ccgggctgtt catctacttc 3840 aggaatcaga aaggtgagga gcctttggta gctggctctc tccataggct tttctggagg 3900 aggaactatg gctttgctga ggttagttct cagtatatga gtggccctga ataaagcctt 3960 tctttcccca aacggctcta atgtcctgct aatccagaaa tcatcagtgc atggttacta 4020 tgtgaaagca taatagcttg tggcctgcag agacaagagg aaggttaaca agtaggggtc 4080 ctttggtttg agatcttgga gcagattaag gaagagccac taagactaat ggaattacac 4140 tggatcctgt gacagacact tcacccttca tgggtcacat ggtctgtttc tgctcctctc 4200 tgccctggct ggtgtgggtt gtagtgacag agaactctcc ggtgggagat ctggggctgg 4260 gacattgtgt tggaagacag atttgcttcc ataaatttta agtgtatata tcttcctctt 4320 tttcccagga cactctggac ttcagccaag aggtaatacc ttttaatcct cttttagaaa 4380 cagatacggt ttccctagtg agaggtgaag ccagctggac ttctgggtcg ggtagggact 4440 tgcagaactt tcctgtctta ggagaggttt ctaaatgcac caatcagtgc tctgtaaaaa 4500 cacaccaatt ggcactctgt ggctagatag atgtttgtaa aatggactaa tcagcactct 4560 gtaaaatgga gcaatccaca ctctgtaaaa tggaccaatc aatgctcttt aaaatggacc 4620 aatcagcagg acatgggcgg ggactaataa gggaatacaa gctggccacc ccagccagca 4680 gcagcaaccc gctcaggtcg ccttccatgc tgtggaagct ttgttctttt gctcttcaca 4740 ataaatcttg ctgttgctca ctcttcgggt ctgtgccacc tttaagagct gtaacactca 4800 ctgtgaagat tcgcggcttc attcttgaag tcagcgaaac cacgaaccca ccggaaggaa 4860 caaactctgg acacactaga attgatggta gaggtgataa ggcatgagac agaaataata 4920 ggaaagactt tggatccaaa tttctgatca ggcaatttac accaaaactc ctcctctcca 4980 cttagaaaag gcctgtgctc tgtgggacta ttggctctgg gagactcagg aacttgtttt 5040 tcttcttcct gcagtgctct catctgagtc cctgaaagag aggaaaagaa actgttagta 5100 gagtcaggtt gaaaacaaca ctctcctctg tcttttgca 5139 // ID KX687282; SV 1; linear; genomic DNA; STD; HUM; 9563 BP. XX AC KX687282; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH30 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*16_02_01v1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-9563 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-9563 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 074c951a23e3b1cbb57ecaedea1dae32. XX FH Key Location/Qualifiers FH FT source 1..9563 FT /organism="Homo sapiens" FT /isolate="IH30" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <173..>9155 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*16_02_01v1" FT mRNA join(<173..272,5537..5806,8063..8344,9045..>9155) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*16_02_01v1" FT /product="MHC class II antigen" FT CDS join(173..272,5537..5806,8063..8344,9045..>9155) FT /codon_start=1 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*16_02_01v1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1C7" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1C7" FT /protein_id="AST15795.1" FT /translation="MVCLKLPGGSCMTALTVTLMVLSSPLALAGDTRPRFLWQPKRECH FT FFNGTERVRFLDRYFYNQEESVRFDSDVGEYRAVTELGRPDAEYWNSQKDLLEDRRAAV FT DTYCRHNYGVGESFTVQRRVQPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFLN FT GQEEKAGMVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRARSE FT SAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQK" XX SQ Sequence 9563 BP; 2517 A; 1857 C; 2342 G; 2847 T; 0 other; gctattgaac tcagatgctg attggttctc caacacgaga ttacccaacc caggagcaag 60 gaaatcagta acttcctccc tataacttgg aatgtgggtg gaggggttca tagttctccc 120 tgagtgagac ttgcctgctt ctctggcccc tggtcctgtc ctgttctcca gcatggtgtg 180 tctgaagctc cctggaggct cctgcatgac agcgctgaca gtgacactga tggtgctgag 240 ctccccactg gctttggctg gggacacccg acgtaagtgc acattgcggg tgctgagcta 300 ctatggggtg gggaaaatag ggagttttgt taacattgtg cccaggccat gtcccttaag 360 aaattgtgac gttttcttca gagattgccc atctttatca ttggatccca aattatttcc 420 tccataaaag gagcttgggt acttgccctc ttcatgagac ttgtgtaagg ggcctttgca 480 caagtcattt cttttcaaat ctccaccaat aaaacctttg cctcacatgt cctcagggtc 540 tttagaggat ttagaaataa ggattctaaa ataaattccc catacagcac ttccctttat 600 tatgttgact tatgtcagac aaaaggaggt tcttactgaa aattttgtgg gagtcaaggg 660 aattcaaagg gtctctccta gacgatccag tgttaggttc cccacaggac ctttggtgtt 720 ggccatagtc ctcatatgtg aggatggacc cagtggcctc cccattatct cctttctttt 780 cttgctgaac tccaatgttt ataaggcctg tatccctgta gcgtatgtag gttctctgac 840 agaagttata cttagtgctc ttcctttctt gtggggaaaa gtccctggaa ctgaagctga 900 gattgttagt acttggagtc accttacaga tacagagcat ttatgaggta ttctttggtg 960 cctaaagaac ttaaggcatc ctctgaaaaa ctagcccagg ttcgtgttca ttatgaatct 1020 tttttaacct ttctgtactt gtttctcttg catctcctat gtgctctaac tagacatgac 1080 agaagagatt taactaatgt ataaattata tgaaattcta ttttttaagt caaaaataat 1140 caactatcag aaatttaata atgttcaaac tatatactct gtgtggggtt accgagatga 1200 tgtgaacatt gttcacgtct catagggctg aaagtcaatg ggcaagtctt gggaactcat 1260 tgtcttactg gggtcttgtc ctaaatttcc taggttcacc catcatgccc tcagctttcc 1320 ttaactagcc atgtctgctt acctcttcct ccagtttcta tttttcccca gctatgttgt 1380 catcatttcc agaaatctct aaagcttgca cagaacctta gcactatgag attcattgaa 1440 agagactttt tttctctttt tgaggtaggg cctggctctg tcacccagtc tatagctcag 1500 tggtgtgatc gaggctcact gcaacctctg ccacccatgc tcaagtgatc ctccctcctc 1560 aggctccaga gtagctggga atacaggcag gcaaccacgc ccagctaatt tttgtaattt 1620 tggtagacat gagattttgc catgttgccc aggctggtct taaactgctg gcttcaagca 1680 atcctcctgc cttggcctcc caacatgcta ggattataga tgtgagccac tgtgcccagg 1740 caaaagagat gactcttaat aaaaaaattt cctttttctt aaatcactgt ttctttatct 1800 gtgaattctt cttccaacta gaaggaggag aaaaaagaag tttgcctgta tttatcactg 1860 ggaggagaag gggtctagtg tgacattaaa atgaaagagt gctggagctt gagccccttc 1920 ttgctttcca ggatccctac agtgatcagt tcccataccc tggtttattc atgtaaacca 1980 cacttatttt tctcagcagc tactctttac tgggctccat tctaggttca aatcattcta 2040 tttgattaag ttagagagcg tccctactct catggaagtt acacaagagt agaggagaca 2100 gacactaacc caataagcat ttaacaaaga agataatgtt agagagtcat agtgcactga 2160 agaaaagaca tcaggtttgt gaaaaagaga gacatggatt cacctacttt agttcatatg 2220 ttagggagct ccacctgaga aagtgacatt cagctgagac aacaaaataa gtagacagtc 2280 gtgaagatct aagggatgaa agttccaggg agaccgaatc gggggaaagc cctgatgtgt 2340 taaattatgt ggagggagag aaagaaagct agaggggctg atgtatagaa agcaaggaaa 2400 tggagaggca gaagatgagg gtaggacaca gagaggaatt caggagcctc atcattatag 2460 gctctgatgt ccacagtaaa aaaaaattaa atttttatta tttatttatt tgtttatttt 2520 attttatttt gtgatggagt ctctctgtgt tgcccagggt agattgctgt ggcacaatct 2580 cggctcactg caacctccgc ctcctgggtt caagcgattc tcctgcctca gcctcccgat 2640 tagctggggc cacaggcgca tgccaccaca cctggctaat tttttgtatt tttagtaggg 2700 atagggtttc accgtgttag ccaggatggt ctcgatctcc tgacctcgtg atccgcccgc 2760 cttggcctcc caaagtgctg ggattacagg catgagccac tgcgcccggc ctatattcaa 2820 tgtttaaaac taattctagc tactctgtgg ggattggatt gttggggttc actagtggtt 2880 aggaagacta tttaggagca cagcagggaa ttcttcaggg aaaacaggtt tgtggcttca 2940 tggagtgcat tagtgataaa gatggtgaaa aagataaagt ggacagactt ggcatgtatt 3000 tttgcttagc ttgttaatga attactgtaa agggggtaga acaatcaagc ttattcctaa 3060 ggattttctt ttgacaaata aatgggtggt agtgttgttt attgagatag gaaaaactat 3120 gggaggaaat gatttgaagt gggtggtttg aaataaaagt tttgtttaaa tatgagatga 3180 ttgattgaca tttatgtgga gaaatccgaa ggtcaatggc atttaagaga ctcatggtga 3240 ggccagggct tcacgtattt atgttggcag cagcaatacg tgtagtgtgt taaattccag 3300 ggcgtggaag aggatacata gggagatgga ttgtgtgaag aaaaaagaac agggcacagg 3360 ccagcaaagg gggctgagaa agagcccaag gatgctggag aaaaaccaag agaacatcat 3420 gtgtgtaagt ccaggaaaat agattatttt caaggagaag ggagaggcca attgtggtga 3480 gtaccactaa gaggaggggc aagtgagaat atgatagaga agcaagtgct gggtttggtg 3540 gagtcgatat ttgcagtcaa tggagcatcc aggtaggaaa ctggattgga ccatttgaag 3600 agtgagtaaa agtgaggacg aggttaaggt tgactgtttt gagtagagag cttcagggaa 3660 ggattgttct ctgggttcag ggagccagct gaacctaaag gaaaaggcta aagaagctga 3720 agagaaggag gaggacctgt gaaccagaga tgctcagtca ttattagcga ggaaatatgg 3780 agagcccctg tgtgcagtgg tgactactca tgcaaaatgt cacacagcca atatttaaca 3840 cagccagtat ttcacacagc caatatttat tagtgacata gcatatacca gttattactc 3900 taggtcatga gaatggagtg ataaataaaa tgaatccagt cgccatcact atatgccatg 3960 taacattttg caatgactgt gtatcaggcc tatgaatttc agtattcaat ttcaataatg 4020 atcctgttgt atctgtggta tttaaaaaca tatacatctc tggaatctaa aattgagagg 4080 ttataagtaa cacccagtat tacaaattta gtgctggaaa tcagattgca gtttaaatct 4140 gagcatatag aaagtccgtt tcttctatgt cagcagatgc tttttgtgtg aggtttaggt 4200 atactgcatt atttgacata aaccagtgtt tctgccctat gtcttcagaa tgacaattct 4260 ttatgaaact aatagaagaa cagaagacaa ttgcaaaatc atgatgaaga tactaattgc 4320 tttagaatta aggaatacaa aaaataatat gagctgcagt tataggatca gaaaagttaa 4380 aatgggaatg tattcgagtg tttattatgt gatcagtgct aagaagtgtc atcatttaat 4440 tttacactta acggtaatcc tgtgaggatt acgctattat taaatgcatt tgatagatta 4500 caaaaaggct tatggttggt aaaaattgac ccaagtagaa gagatcgtgt ttttattcag 4560 gttttctgat tatagagttt gagagtttga ccatcattag tgagtagtga ctatattgtg 4620 tctgaattat tgacacaatt tctgatattc atatgtacca ggctgtttct tagagtgggg 4680 acagaaatgc aagggctgct agttctgatg tataggagaa actttcattc attttgcatt 4740 tatcatttta aacgttgtat atgtctatct gggcatgtgt tcaagaacac aaggaagtat 4800 taaatcactc cttcttctga ggtttgacta gcaagttggg ctagagttac aaataaaata 4860 caggttccta gtgaaatctg aatttcagat acacaaccat aatttattgg aaatccaaat 4920 ttaactggga atcttctatt attctctgct ctagaacgcc acacttctga tatttctcat 4980 tgctgtctaa gctcttgtgt gtttggtttt tggccatcgc tttcactgct ctttaagctc 5040 ccccagcgga gtggagaggt ctgttttccc tcgtttggat tcctagaggc agcgcaggcc 5100 tggcacaagg tcatcactaa ggaagtgttc acagggtgaa cgcggtgggt gctgttgaag 5160 gtaccggtaa agcgtgtggg atgagagaag gagcagagag tgcctttggg gctcccagga 5220 ggaggcggcg cgggctccgg tgctgggcgg atcctcctcc agctcctgct tggaggtctc 5280 cagaacaggc tggaggcagg gagggggtcc caaaagcctg gggatgagaa ggggttttcc 5340 cgcatggtcc cccaggcccc cgttcgcctc aggaagacgg aggatgagct cctgggctgc 5400 aggtggtggg cgttgcgggt ggggccggtt aaggttccag cgcccgcacc ccgctcaggg 5460 agccccggat ggtggcgtcg ctgtccgtgt cttctcagga ggccgccctg tgaccggatg 5520 gttcgtgtcc ccacagcacg tttcctgtgg cagcctaaga gggagtgtca tttcttcaat 5580 gggacggagc gggtgcggtt cctggacaga tacttctata accaggagga gtccgtgcgc 5640 ttcgacagcg acgtggggga gtaccgggcg gtgacggagc tggggcggcc tgacgctgag 5700 tactggaaca gccagaagga cctcctggaa gacaggcgcg ccgcggtgga cacctactgc 5760 agacacaact acggggttgg tgagagcttc acagtgcagc ggcgaggtga gcatggtggg 5820 gggcggggcc tgggtccttg tgagctggga atctgagtgt gtgtgtgtgt gtgtgtgtgt 5880 gtgtgtgtgt gtgagagaga gagagagaga ggaagagaga gagagagcgc catctgtgag 5940 catttagaat cctctcagtc cggagcaagc agttctgaga gcacaggtgt gtgtgtaaag 6000 tgtggatttg tctgtgtctg tgtgtctgtt gtgggagggg aggcaggagg gggctgtttc 6060 ttatccttgg agacctctgt ggggaggtga caagggaggt gggtgctggg ggctggagag 6120 agaggagacc ttgattatct cggtccttag agatgcaggg aagggaaatg taaggggtgt 6180 gtggttgggg tgaaggttta ggggaggact gctgaggggt aaggcaggtt tgggataatg 6240 tgaggaggcc agttccagac tctccctggc atacaccctt cgtgtaatct ctgaattaaa 6300 agtgtgtgct gtttgtttgt aaaagcaata gattaatttc tagaggaact gagtagacct 6360 ctgaggcacc tctgaagctt cattagatct aaatttcttc ctagtttttt gtttttttca 6420 gtgtgtatat ttttacatag tagaaatgac tgtgaaacta actttttgaa ttaaagtttt 6480 gacacggtta ctattttatt ataatgctgg tagttttcta gtagttacat attattcttt 6540 tatatataat atttgtgaca caactcacct cactttcccg tttgttgacc tttattatga 6600 cattcaccag aagttgaaat tgtgtgtttc tggttaattt ttaatttata ttttttattt 6660 gtaattcctt tgaattattt tgccctattt attggccgat tataattatt gctctaagaa 6720 ttccctattg tatttggtag gtaatggaca atgatctacg gtctaatatc ttgagggctt 6780 agtatttttc tcagtgactt tctgcgttct ttgtactata agattattaa cactttattg 6840 atatttgatc cagcatttgc tccagtttgt ggtttgtatg tggattttga aaattctttt 6900 ccatgttaag aatttgaaca tttttattta ataaaatata ttgcaacatt tttattaatg 6960 atctacaatc catctgaaat ctgccatttt gtggcattgt tgtctccagg tttctcctta 7020 cttctaaaaa aatagttgta tttattgaga gtatgctagt gtcggggatt ttcctgggca 7080 taagcacccc aagtaacgag tcccagacac tgccttaatc caaatgtgat tctggaaaga 7140 aaaatcattt tacaatgata ggcctaataa taattatgct tgtgttgcac gggagatgca 7200 ttgatcagct aaatgtaaat ataagaactt tcaaaactta aatgacgttc cctaatcctt 7260 ctctctgctt caggactcat gcttttctag gaaagtaaaa atttggagaa tcatttctgt 7320 ctgtcccacc ttcccagggg cagaacaatt tctgttgtgt tctaaggtgt gagtgcatgg 7380 gagtagtatt cctaaaattc atacttggtt tcctcatgta cccaactctg tccctttatc 7440 tatgcatatt gctttaaatc atatttttct gtcaaggtgt acaaggatga taaataggtg 7500 ccaagtggag cactcaagtg tgatgagtgc cctcacagtg gaatggagtg agaagctttc 7560 tgacctcata aactgaaggc tatcttcagt cattgtttta tatattttac gtgcattaat 7620 cctcatataa ccccaagagg taaattagta taattatcct tcattgtagg tgacaaagtt 7680 gagacacaga agaatcaaaa aactcttcca ggatcaacca gtaaaaggca gaccttggat 7740 tcgaaccagg caacctggct caaatatcag ttttaattac tacactctgt actttccaag 7800 atttgtaaac agtttgacaa tgcatgccga tttaaaacta tgaagaaaca aacacaattt 7860 ttcacaacac ctctcaaatc taatgggtcc tcactgtcaa gattaaattc caggctgatg 7920 acactgtaag gtcacatggc cagctgtgct ataggcctgg tcaaggccag agcctgggtt 7980 tgcagagaag cagacacaca gccaaaccag gagacttact ctgtcttcct gactcattcc 8040 ctctacgttg tttttctcct agtccaacct aaggtgactg tatatccttc aaagacccag 8100 cccctgcagc accacaacct cctggtctgc tctgtgagtg gtttctatcc aggcagcatt 8160 gaagtcaggt ggttcctgaa cggccaggaa gagaaggctg ggatggtgtc cacaggcctg 8220 atccagaatg gagactggac cttccagacc ctggtgatgc tggaaacagt tcctcgaagt 8280 ggagaggttt acacctgcca agtggagcac ccaagcgtga caagccctct cacagtggaa 8340 tggagtgagc agctttctga cttcctaaat ttctcaccca ctaagaaggg gaccgtgcta 8400 atccctgagt gtcaggttcc tcctctccca catcctattt taatttgctc catgttctca 8460 tctccatcag cacaggtcac tgggggtagc cctgtaggtg tttctagaaa cacctgtacc 8520 tcctggagaa gcagtctcgc ctgccaggcg ggagagactg tccctctttt gaacctcccc 8580 atgattttgc aggtcagggt cacccactct cccaggctcc aggccctgcc tctgggtctg 8640 agactgagtt tctggtgctg ttgctctgag ttattttttg tgatctggga agaggagaag 8700 tgtaggggcc tacctgacat gaggggagtc caatctcagc cctgcttttt attagctttg 8760 tcactctaga caaactactt atcctcattg agtctcaggc tttctgtgga tcagatgttg 8820 aacttgtgcc ttacatcaag gctgtaatat ttgaatgagt ttgatgtctg aacatcgtaa 8880 ctgttcagtg taatttgaaa tccttttttt ctcctgaaat ggctagttat tttagttctt 8940 gtgaggcagc tttctgcccc attttcaaag ctctgaatct tagagtctca agtaaaaagg 9000 ttcaatttgg aataaacatc actaaacctg gcttcctctc tcaggagcac ggtctgaatc 9060 tgcacagagc aagatgctga gtggagtcgg gggctttgtg ctgggcctgc tcttccttgg 9120 ggccgggctg ttcatctact tcaggaatca gaaaggtgag gagcctttgg gagctggctc 9180 tctccataag cttttctgga ggaggaacta tggctttgct gaggttagtt ctcagtatat 9240 gagtggccct gaataaagcc tttctttccc caaacggctc taatgtcctg ctaatccaga 9300 aatcatcagt gcatggttac tatgtgaaag cataatagct tgtggcctgc agagacgaga 9360 ggaaggttaa caagtagggg tcctctggtt tgagatcctg gagcaaatta aggaagagcc 9420 actaaggcta atggaattac actggatcct gtgacagaca cttcaggctt catgggtcac 9480 atggtctgtt tctgctcctt tctgccctgg ttggtgtggg ttgtggtgtt agagaaatct 9540 caggtgggag atctggggct ggg 9563 // ID KX687283; SV 1; linear; genomic DNA; STD; HUM; 5486 BP. XX AC KX687283; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH4 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*16_04e1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5486 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-5486 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 736d25a0d76106bc1f9d84112d89777e. DR IMGT/HLA; HLA-DRB1*16:04:01; HLA00881. XX FH Key Location/Qualifiers FH FT source 1..5486 FT /organism="Homo sapiens" FT /isolate="IH4" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <241..>4356 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*16_04e1" FT mRNA join(<241..510,2765..3046,3747..3857,4333..>4356) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*16_04e1" FT /product="MHC class II antigen" FT CDS join(<241..510,2765..3046,3747..3857,4333..>4356) FT /codon_start=3 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*16_04e1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1C4" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1C4" FT /protein_id="AST15796.1" FT /translation="RFLWQPKRECHFFNGTERVRFLDRYFYNQEESVRFDSDVGEYRAV FT TELGRPDAEYWNSQKDFLEDRRALVDTYCRHNYGVGESFTVQRRVQPKVTVYPSKTQPL FT QHHNLLVCSVSGFYPGSIEVRWFLNGQEEKAGMVSTGLIQNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSVTSPLTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGH FT SGLQPT" XX SQ Sequence 5486 BP; 1341 A; 1177 C; 1366 G; 1602 T; 0 other; cagggagggg gtcccaaaag cctggggatg agaaggggtt ttcccgcatg gtcccccagg 60 cccccgttcg cctcaggaag acggaggatg agctcctggg ctgcaggtgg tgggcgttgc 120 gggtggggcc ggttaaggtt ccagcgcccg caccccgctc agggagcccc ggatggtggc 180 gtcgctgtcc gtgtcttctc aggaggccgc cctgtgaccg gatggttcgt gtccccacag 240 cacgtttcct gtggcagcct aagagggagt gtcatttctt caatgggacg gagcgggtgc 300 ggttcctgga cagatacttc tataaccagg aggagtccgt gcgcttcgac agcgacgtgg 360 gggagtaccg ggcggtgacg gagctggggc ggcctgacgc tgagtactgg aacagccaga 420 aggacttcct ggaagacagg cgggccctgg tggacaccta ctgcagacac aactacgggg 480 ttggtgagag cttcacggtg cagcggcgag gtgagcatgg tggggggcgg ggcctgggtc 540 cttgtgagct gggaatctga gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgaga 600 gagagagaga gaggaagaga gagagagagc gccatctgtg agcatttaga atcctctcag 660 tccggagcaa gcagttctga gagcacaggt gtgtgtgtaa agtgtggatt tgtctgtgtc 720 tgtgtgtctg ttgtgggagg ggaggcagga gggggctgtt tcttatcctt ggagacctct 780 gtggggaggt gacaagggag gtgggtgctg ggggctggag agagaggaga ccttgattat 840 ctcggtcctt agagatgcag ggaagggaaa tgtaaggggt gtgtggttgg ggtgaaggtt 900 taggggagga ctgctgaggg gtaaggcagg tttgggataa tgtgaggagg ccagttccag 960 actctccctg gcatacaccc ttcgtgtaat ctctgaatta aaagtgtgtg ctgtttgttt 1020 gtaaaagcaa tagattaatt tctagaggaa ctgagtagac ctctgaggca cctctgaagc 1080 ttcattagat ctaaatttct tcctagtttt ttgttttttt cagtgtgtat atttttacat 1140 agtagaaatg actgtgaaac taactttttg aattaaagtt ttgacacggt tactatttta 1200 ttataatgct ggtagttttc tagtagttac atattattct tttatatata atatttgtga 1260 cacaactcac ctcactttcc cgtttgttga cctttattat gacattcacc agaagttgaa 1320 attgtgtgtt tctggttaat ttttaattta tattttttat ttgtaattcc tttgaattat 1380 tttgccctat ttattggccg attataatta ttgctctaag aattccctat tgtatttggt 1440 aggtaatgga caatgatcta cggtctaata tcttgagggc ttagtatttt tctcagtgac 1500 tttctgcgtt ctttgtacta taagattatt aacactttat tgatatttga tccagcattt 1560 gctccagttt gtggtttgta tgtggatttt gaaaattctt ttccatgtta agaatttgaa 1620 catttttatt taataaaata tattgcaaca tttttattaa tgatctacaa tccatctgaa 1680 atctgccatt ttgtggcatt gttgtctcca ggtttctcct tacttctaaa aaaatagttg 1740 tatttattga gagtatgcta gtgtcgggga ttttcctggg cataagcacc ccaagtaacg 1800 agtcccagac actgccttaa tccaaatgtg attctggaaa gaaaaatcat tttacaatga 1860 taggcctaat aataattatg cttgtgttgc acgggagatg cattgatcag ctaaatgtaa 1920 atataagaac tttcaaaact taaatgacgt tccctaatcc ttctctctgc ttcaggactc 1980 atgcttttct aggaaagtaa aaatttggag aatcatttct gtctgtccca ccttcccagg 2040 ggcagaacaa tttctgttgt gttctaaggt gtgagtgcat gggagtagta ttcctaaaat 2100 tcatacttgg tttcctcatg tacccaactc tgtcccttta tctatgcata ttgctttaaa 2160 tcatattttt ctgtcaaggt gtacaaggat gataaatagg tgccaagtgg agcactcaag 2220 tgtgatgagt gccctcacag tggaatggag tgagaagctt tctgacctca taaactgaag 2280 gctatcttca gtcattgttt tatatatttt acgtgcatta atcctcatat aaccccaaga 2340 ggtaaattag tataattatc cttcattgta ggtgacaaag ttgagacaca gaagaatcaa 2400 aaaactcttc caggatcaac cagtaaaagg cagaccttgg attcgaacca ggcaacctgg 2460 ctcaaatatc agttttaatt actacactct gtactttcca agatttgtaa acagtttgac 2520 aatgcatgcc gatttaaaac tatgaagaaa caaacacaat ttttcacaac acctctcaaa 2580 tctaatgggt cctcactgtc aagattaaat tccaggctga tgacactgta aggtcacatg 2640 gccagctgtg ctataggcct ggtcaaggcc agagcctggg tttgcagaga agcagacaca 2700 cagccaaacc aggagactta ctctgtcttc ctgactcatt ccctctacgt tgtttttctc 2760 ctagtccaac ctaaggtgac tgtatatcct tcaaagaccc agcccctgca gcaccacaac 2820 ctcctggtct gctctgtgag tggtttctat ccaggcagca ttgaagtcag gtggttcctg 2880 aacggccagg aagagaaggc tgggatggtg tccacaggcc tgatccagaa tggagactgg 2940 accttccaga ccctggtgat gctggaaaca gttcctcgaa gtggagaggt ttacacctgc 3000 caagtggagc acccaagcgt gacaagccct ctcacagtgg aatggagtga gcagctttct 3060 gacttcctaa atttctcacc cactaagaag gggaccgtgc taatccctga gtgtcaggtt 3120 cctcctctcc cacatcctat tttaatttgc tccatgttct catctccatc agcacaggtc 3180 actgggggta gccctgtagg tgtttctaga aacacctgta cctcctggag aagcagtctc 3240 gcctgccagg cgggagagac tgtccctctt ttgaacctcc ccatgatttt gcaggtcagg 3300 gtcacccact ctcccaggct ccaggccctg cctctgggtc tgagactgag tttctggtgc 3360 tgttgctctg agttattttt tgtgatctgg gaagaggaga agtgtagggg cctacctgac 3420 atgaggggag tccaatctca gccctgcttt ttattagctt tgtcactcta gacaaactac 3480 ttatcctcat tgagtctcag gctttctgtg gatcagatgt tgaacttgtg ccttacatca 3540 aggctgtaat atttgaatga gtttgatgtc tgaacatcgt aactgttcag tgtaatttga 3600 aatccttttt ttctcctgaa atggctagtt attttagttc ttgtgaggca gctttctgcc 3660 ccattttcaa agctctgaat cttagagtct caagtaaaaa ggttcaattt ggaataaaca 3720 tcactaaacc tggcttcctc tctcaggagc acggtctgaa tctgcacaga gcaagatgct 3780 gagtggagtc gggggctttg tgctgggcct gctcttcctt ggggccgggc tgttcatcta 3840 cttcaggaat cagaaaggtg aggagccttt gggagctggc tctctccata agcttttctg 3900 gaggaggaac tatggctttg ctgaggttag ttctcagtat atgagtggcc ctgaataaag 3960 cctttctttc cccaaacggc tctaatgtcc tgctaatcca gaaatcatca gtgcatggtt 4020 actatgtgaa agcataatag cttgtggcct gcagagacga gaggaaggtt aacaagtagg 4080 ggtcctctgg tttgagatcc tggagcaaat taaggaagag ccactaaggc taatggaatt 4140 acactggatc ctgtgacaga cacttcaggc ttcatgggtc acatggtctg tttctgctcc 4200 tttctgccct ggttggtgtg ggttgtggtg ttagagaaat ctcaggtggg agatctgggg 4260 ctgggacatt gtgttggagg acagatttgc ttcaataact tttaagtgta tatcttttcc 4320 tctttttccc aggacactct ggacttcagc caacaggtaa taccttttaa tcctctttta 4380 gaaacagaca cagtttccct agtgagaggt gaagccagct ggacttctgg gtggggtggg 4440 gacttggaga acttttctta caagaggttt cttttttttt ttttttttga gacggagtcg 4500 aggtctccag aacaggctgg agtgcagtgg cgggatctcg gctcactgca agctccgcct 4560 cccgggttca cgccattctc ctgcctcagc ctcccaagta gctgggacta caggcgcccg 4620 ccactacgcc cggctaattt tttgtatttt tagtagagac ggggtttcac cgttttagcc 4680 aggatggtct cgatctcctg acctcgtgat ccgcccgcct cggcctccca aagtgctggg 4740 attacaggtg tgagccaccg cgcccggcct acaagaggtt tctaaatgca ccaatcagtg 4800 ctttgtaaaa acacaccaat aggttctctg tggctagctg gatgtttgta aaatggacca 4860 attcgcactc tgtaaaatag accaatcagc actctttaaa atggaccaat cagcactttt 4920 aaaatgggcc aatcaccact ctttaaaatg gaccaatcag cactctttaa aatggaccaa 4980 tctgcaggac atgggcaggg acaaatacag gaataaaagc tggccacccc aaccagcagt 5040 ggcaacccac tcaggtcctc ttccctgctg tggaagtttt gttcttttga tcttcacaat 5100 aaatcttgct gctgcccact ctttgggtcc ctgccgcctt taagagctgt aacactcact 5160 gtgaaggtct gcaggaagtc agcgagacca caaacccacc ggaaggaaca aactcaggac 5220 acaccagaat gatggtagag gtgataaggc atgagacaga aataatagga aagactttgg 5280 atccaaattt ctgatcaggc aatttacacc aaaattcctc ctctccactt agaaaaggcc 5340 tgtgctctgc gggactattg gctcagggga gactcaggaa cttctttttc ttcttcctgc 5400 agtgctctca tctgagccct tgaaagaggg gaaaagaaac tgttagtaga gccaggttga 5460 aaacaacact ctcctctgtc ttttgc 5486 // ID KX687284; SV 1; linear; genomic DNA; STD; HUM; 12870 BP. XX AC KX687284; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH22 MHC class II antigen (HLA-DRB3) gene, DE HLA-DRB3*01_01_02_01e1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-12870 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-12870 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 06c516c3905b2536010b0f8a3003968a. DR IMGT/HLA; HLA-DRB3*01:01:02:01; HLA00887. XX FH Key Location/Qualifiers FH FT source 1..12870 FT /organism="Homo sapiens" FT /isolate="IH22" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <174..>12072 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*01_01_02_01e1" FT mRNA join(<174..273,7955..8224,10499..10780,11465..11575, FT 12049..>12072) FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*01_01_02_01e1" FT /product="MHC class II antigen" FT CDS join(174..273,7955..8224,10499..10780,11465..11575, FT 12049..>12072) FT /codon_start=1 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*01_01_02_01e1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1D2" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1D2" FT /protein_id="AST15797.1" FT /translation="MVCLKLPGGSSLAALTVTLMVLSSRLAFAGDTRPRFLELRKSECH FT FFNGTERVRYLDRYFHNQEEFLRFDSDVGEYRAVTELGRPVAESWNSQKDLLEQKRGRV FT DNYCRHNYGVGESFTVQRRVHPQVTVYPAKTQPLQHHNLLVCSVSGFYPGSIEVRWFRN FT GQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSALTVEWRARSE FT SAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPT" XX SQ Sequence 12870 BP; 3460 A; 2543 C; 2981 G; 3886 T; 0 other; gctgttgaac tcagatgctg attggttctc cgacacgaga ttacccaatc caggagcaag 60 gaaatcagta acttcctccc tataatttgg aatgtgggtg gaggggggtc atagttctcc 120 ctgagtgaga cttgcctgct cctctggccc ctggtcctgt cctcttctcc agcatggtgt 180 gtctgaagct ccctggaggc tccagcttgg cagcgttgac agtgacactg atggtgctga 240 gctcccgact ggctttcgct ggggacaccc gacgtaagag cacattgagg gtgctgagct 300 actatggggt gggggaatat agggagttgt gttaacattg tgcccaggcc atgtccctta 360 agaaattgtg aggttttctt cagagattgc tcatctttat caagggatcg caaattattt 420 cctccacaaa aggaacttgg ctacttgccc tctccatgag acttgtgtaa ggggcctttg 480 tacaggccat ttcttctcaa atctccacca ataaaacctt tgcatcacat gtactcaggg 540 tctttagagg atttggaaat aaggatgcta aaataaattc cccatacagc aattcccttt 600 attatgttga cttatgtcag acaaaaggag gtttttactg aaaattttgt gggagtcaag 660 ggaattcaaa gggtctctcc tagacgatcc tgggttatgt cctccacagg acctgtggtg 720 ttggcccctc ttcctcatat gtgaggatgg acccagtggc ctccctagta tctcctttct 780 tttctttctg aactccaatg tttataaagc ctgtatccct gtagtgtatg taggttgtct 840 gacagaagtt atacttagtg ctctttcttt cttatgggga aaaatccctg gaactgaagc 900 tgagatcatt agtacttgga atcaccttac agatacagag cacttatgag gtattctttg 960 gtgcctaaag aacttaaggc atcctctgaa aaactggccc aggttagtgt ttattatgaa 1020 tctttttaac ctttctatac ttgtttctcc tacatctcct acatgctcta actagacatg 1080 acagaagaga tttaactaat gtagtataaa ttatatgaaa ttctattttt gtaagtcaaa 1140 aataatcaaa tatcagaaat ttaataatgt tcaaactata tactgtgtgg ggttaccgag 1200 acaatgtgga cattgttcac atctcatagg gctgaaagtc aatgggcaag tcctggaaac 1260 tcattgtctt actgcggtct tgtcctcagt ttcataggtt cacccatcat gccctcagct 1320 ttccttaatt agccatgtct gcttacctct tcctcccatt tctctctatt tttccccaac 1380 tatgttgtca tcatttccag aaatctctaa agcttgcaca gatccttagc actatgagat 1440 ccactgaaag agataatatt tttctctttg agatagggcc tgcctctgtc acccaggctg 1500 tagctcagtg gtgcgatcga ggctcactgc aacctctgcc tcccacactc aagcaatcct 1560 ccctcctcag gctccagagt agctgggaat acaggcaggc aaccacgccc agctaatttt 1620 tgcaattttg gtagagagga gattttgcca tattgcccag gctggtctta aactgctgaa 1680 ctcaagcaat cctcctgcct tagcctccca acatgctagg attatagatg tgagccagtg 1740 tgcccaggca aaagagatga ctcttaataa aaagatttcc tttttcttaa atcactgttc 1800 ctttatccat gaattcttct tccaactaga agaaggagaa agaagtttgc ctgtatttct 1860 caccaggagg agaaggggtc tagtgtgaca tcaaaatgaa agagtgctgg aacttgagcc 1920 ccttcttgct ttccaggatc cccacagtga tcagttccca taccctggtt tatttgtgta 1980 aaccacactt atttttctca gcagctactg tgtactgggt tccattctag gttcaaatca 2040 ttctatttga ttaagataga gagggtccca actctcaagg aagttacaag agtggaggag 2100 acagacacta acccaataag catttaacaa agaagataat gttagagagt catagtgcac 2160 tgaagaaaag acatcagatg tgtgttgaaa gagagaaatg gattcatcta ctttagtttg 2220 tatgtttagg gagctctacc tgagaaagtg atattcagct gagacaacaa aataagtaga 2280 cagtcatgaa gatctaacgg acgaaagttt cagggagacc gaatcgaggg aaagcactgg 2340 tgtgggaaat tatgtggagg gagagaaaga aggctagaag ggctgacgta tagaaagcaa 2400 ggaaatggag aggcagaaga tgaggtagga cacagagagg aagtcaggag cctcatcatt 2460 ataggctctg atgtccacgg taaaaaattt gaattttatt ttatttttat ttatttttaa 2520 attttattta tttatttatt ttgagatgga gtttcattct tgttgcccag gctggagtgc 2580 catggcacaa tctccactca ctgcaacctc cacctcctgg gttcaagtga ttctcctgcc 2640 tcagcttccc aagtaactgg gattacaggc acccaccacc atacctggct aatttttttg 2700 tatttttagt atacatgggg tatcaccatg ttgaccaggc tggtcttgaa ctcctgacct 2760 cagataatct gtctgccttg gcctcccaaa gtgctgggat tacaggcgtg agccaccacc 2820 cccggactga attttattta aatagatatg agaagctgct gtatggttac aaggagagtc 2880 aatttatatt caacttttgt gtgtgtgtgt gatggagtct cactctgttg cccaggctag 2940 attgcagtgg cacaatctcg gctcactgca acctccgcct cctgggttca agaaattatc 3000 cttcctcagc ctcctgagta gctgggacca caggtgcatg ccaccacagt cggctacttt 3060 ttgtattttt agtagggatg gggtttcacc gtgttagcca agatggtctc gatctcctga 3120 ccttgtgatc cacccgcctc ggcctcccaa agtgctggga ttacaggcat gagccactgc 3180 gcccagctta tattcaatta ttacaattaa ttctagctac tttgtgggga ttggattgtt 3240 ggggttcaca agtggttagg aggactattt aggagcacag cagggaattc tccagggaaa 3300 acaggcttgt ggcttcatgg agtgcattag tgataaagac ggtgaaaaag ataaagtgga 3360 caggcttggc atgtattttt gcttagcttg ttaatgaatt actgtaaagg gggtggaaca 3420 atcaagttta ttcctgagga ttttgttttg acaaataagt gggtggtagt tttgtttatt 3480 gagataggaa aaactgtggg aggaaatgat ttgaagtggg tggttggaaa taaaagtttt 3540 gtttaaatta gagatgattt attgacattt atgtagagca atcagaaggt cagtggcatt 3600 taagagactc atggtgaggt gaggctaggg cgtcagatat ttatgttggc ggcatcaata 3660 cgtgtagtgt gttaaattct agggagtgga agaggataca tagggagatg gattgtgtgg 3720 agaaaaaaga agagggcaca ggccagcaaa gtgggctgag acagagccca gggatgttgg 3780 agaaaaacca agagaacata atgcgtgtaa gtcaaggaaa atatattttt ttcagggaga 3840 agggagaggc caattgtggt gagtaccact aagcagaggg ggaagtgaga acgtgacaga 3900 gaagcaagtg ctgggtttgg tggagttgat atttgtagtc aatggagtat ccagggagga 3960 aactggattg gactatttga agagtgagta gaagtgagga cgaggttaag gttgactgtt 4020 ttgagtagaa cttcgggaag gactgtgctc tgggttcagg gagcccgctg aatctaaagg 4080 aaaaggctaa agaagctaaa gagacggagg aagacctgtg aacaagagat gctcagtcat 4140 tagcaaggaa atactggaga gcccctgtgt gcagtggtga ctactcatgc aaaaggtcac 4200 acagccaata tttaacacag ccagtatttc acagagccaa tatttattag tgacatagaa 4260 tataccagtt attactctag gtcatgagag tggtgataaa taaaatgaat ccgctcgcca 4320 tcagtatatg ccatgtaaca gtttgcagtg actgtgtacc aggcctgtga atttctgtat 4380 gcaatttcaa taatgatcct gctgtatctg tggtatttaa aaacatatac atctctggaa 4440 tctaaaattg agaggttata agtaaaaccc agtattagaa atttagtgct ggaaatcaga 4500 ttgcagttta aatctgagca tatagaaagt ccctttcttc tatgtcagca gatgcctttt 4560 atgtgaggtt taggtatact acattattag acataaacca gtgtttctgc cctatgtttt 4620 cagaatgaca attctttatg aaactcatag aagaacagaa gacaattgca aaatcatgaa 4680 gatactaatt gctttagaat taaggaatac aaaaaataat gtgagctaca gttataggga 4740 tcataaaagt taaaatggga atgtatttga gtgtttatta tgtgatcagt gctaagaaga 4800 gtcatcattt aattttacac ttaacagtaa tcctgtgagg attatgctat tattaaatgc 4860 atttgatata ttacaaaaag gcttacggtt ggtaaaaatt gacccaagta gaagaggtca 4920 cctttttatt cagattttct gattgtaggg tttgagagtt tttccatcat tagtgagtag 4980 tgactatatt gtgtctgaat tattgacaga atttctgata ttcatatata ccaggttgtt 5040 tctttgagtg gggacagaga tgcaagggct gctaattcca atgtatagga gaaactttca 5100 atgattttgc atttatcatt ttaaaagttc agtatgtcta taatggtcat gcgttgacaa 5160 acacaaggaa gtattaaatc actccttctt ctgaggtttg actagcaaat tgggcaagag 5220 ttaccaaata aaacacatgt tcctagttaa atctaaattt cagatacacg accataattt 5280 attggaaatc caaatttaat tgggtaccct ctggttttat ttgccaaatc tgtcaaccct 5340 aagtgggaca catggacatg gattacagtg ctacccatgc aagccacagt gacagcaact 5400 ttacacatgt ttacatttta actttctctc tgtaagaaag tgcttagata atttagggat 5460 aaaaagatag acattgtttg atccagggtg gacacctctc tgccatcgtt tctaaagggc 5520 aaagggagat ttctgcaggt cttgctcaca gtctggggac ctgctcatgt tttgaaactg 5580 tctgtatcag aatgtcattt tcttggtttc tccctttctg aggggacttg actacaaaac 5640 caagagttct gcctctggcc aaggctggaa atgtgatgcc tgctagcatt gttgggagtg 5700 ggagactgag agaaatgagt tagttggggc atttaatggg aataaaatag ctgtggttgt 5760 gattcattac tatagataat tagtggacca gtggcggaga aattaagaaa aaagatgatg 5820 tgaatgataa atgatatgat tagtgactgc ttggtaaggc aaggaaatca ttaaatcttg 5880 gttctcatca agttcatttt ctgaaaagat agcactgtat tgggaccaga attctacaaa 5940 acattctttt tacctaggac caagattttc aagaaatatt tttcaataca attctcagct 6000 gctccataac taatagtagc ttgttcaaca cagatttttt cagatggttc acacctgtag 6060 ttcttaccca gggatagttc accacccctc ccttccctcc catcatcctt ggggaacagt 6120 gacaatgttt ggaacaattt ttggttgtca caacaggggt ttcttctgat atttaatgag 6180 tagaagccag gaacactgct agagaaccta caatgttcag aacagcctcc gccatcaaca 6240 aagaattatc tggtccaaaa tgtcaatagt gctgaggctg agagcactgg ttcacgctgt 6300 gctctttttg aaaattctac actcacatct gttatacact caccacacag ttgtttttta 6360 tagtttattt ttgcttgttc cattataaaa aaattagaca gttgcataaa ttcaaccact 6420 ttcttgttga atccacttag tcaatgcaag cttaatattt tcatatttag tttttgcctt 6480 atgcaatatt tttcaacatt ttcatgagtt gttggtcatc accatctcta ttaacttcca 6540 acaacttgct cttgtaagtc acaaatagtg atgctgctga aattatttct cagtaacatg 6600 cctcagattt ctgtagtgat tctacatttg atattattca caatgtaaaa tgcttctatg 6660 tactcatttc acttttaccc aaggattatt tttaagttat ttttgtcgtt ttcacacttc 6720 aaacataaag acaaaaacat caaaaatata tactgtgttt tacatatgtg tctattttca 6780 cacatatatg tatgtatgtt tatatgtatg gaaactacag aagcacatgt cgccaataag 6840 agctctgaga cacctttgac cacttaccct tatcagatgc gatttgccaa atgagttgtg 6900 gaaacaagtt ttttaaactg aatttctgag ctttgtgaat ttagaaatgc aaaggaaagt 6960 ttgtggacat ttacagggat catggtttta ttgtccttta aactcttcga tactttacca 7020 ttgtcttact ataaatccaa aatcctaacg ccacccacga ggctttcaat acctggcttc 7080 ttgtgatttc tccaggctaa ccttttaccc tccttcccct cagcctctct gctttagtga 7140 actttctcct agttttttga agaagttcat caattcaagc ttttgtacat gggatttcct 7200 aaacctgaaa tgtgcctccc gttttgtcca aacagacacg ggctccactc tgccccctgg 7260 ctcacacctg cttaacctgt caagtcacat ctgaactgtc actcttcaga gggtccttct 7320 ctggcaccct aatgtaattg agatcatcct attattctct gctctagaac ttcccacttc 7380 cgggatttct cattcctgtc taacctcttg tgtgtctggt ttttggccat cgctttcact 7440 gctctttaag ctcccccagc ggagtggaga ggtctgtttt cccttgtttg gattcctaga 7500 ggcagcgcag gcctggcaca aggtcatcac taagaaagtg ttcacaggat gaacgcggtg 7560 ggtgctgttt aaggaaccgg taaacatgtg ggatgagaga aggagcagag tgtctttggg 7620 gtggaggctc ctaggaggag gcggggcggg ctgcggtgcg gggcggatcc tcctccagct 7680 cctgcttgga ggtctccaga acaagctgga ggcagggagg gggtcccaaa agcctgggga 7740 tgagaagggg ttttcccgca tagtccccta ggcccccgtt cgcctgagga aaacggagga 7800 tgagctcctg ggctgcaggt ggtgggcgtt gcgggtgggg ccggttaagg ttcccagtgc 7860 ccgcacccca cccagggagc cccggatggc ggcgtcgctg tcagtgtctt ctcaggaggc 7920 cgcccgtgtg accggatcct tcgtgtaccc gcagcacgtt tcttggagct gcgtaagtct 7980 gagtgtcatt tcttcaatgg gacggagcgg gtgcggtacc tggacagata cttccataac 8040 caggaggagt tcctgcgctt cgacagcgac gtgggggagt accgggcggt gacggagctg 8100 gggcggcctg tcgccgagtc ctggaacagc cagaaggacc tcctggagca gaagcggggc 8160 cgggtggaca attactgcag acacaactac ggggttggtg agagcttcac agtgcagcgg 8220 cgaggtgagc atgtcggggg gcggggcctg ggtccctgtg agctggaaat ctgagagaga 8280 gtgtgtgtgt gtgtgtgtgt gtgtgtgtga gagagagaga gagagaggaa gagacagaga 8340 gagggagcgc gccatctgtg agcatttaga atcctctcaa tcccgagcaa gcagttatga 8400 aggcacaggt gtgtgtgtag agtgtggatt ggtctgtgtc tgtgtgcctg ttgtgggagg 8460 ggaagcagga gggggctgct tcttatcctt ggagacttct gtggagaggt gacaagggag 8520 gtgggtgcgg gcggctggag agagaggaga ccttgattgt cctgggtcct tagagatgca 8580 gggaaggaaa gtgtaaggtg tgtgtgggtg gggtgaaggt ttaggggagg agagctgagg 8640 ggtaaggaag gtttgggata atgtgaggag gccggttcca gactgtccct ggcacacacc 8700 cttcatgtaa tctctgaaat aaaagtgcgt gctgtttgta aaagcattag attaagttct 8760 aggggaattg agtagacctc taaggcacct ctgaaacttc tttaggtata aatttcttgc 8820 tagttttttg tttttctagt gtgtatattt ttacatagta gaaatgacag tgaaactaac 8880 ttttgaatta aagttttaac acagttactg tattattata atgctaatag ttttctagta 8940 gttacatatt attcttttat atataatagt tgtgacacaa cttagggatc actttcccct 9000 ttgttgacct ttattatgac attcaccaaa agttgaaaat gtatgtttct ggttaatttt 9060 taatttatat tttttcattt gaaaaaatgt ggagaggtct gtttttcatt caaaagagtt 9120 cttttgaatt attttgaccg atttattggt caattttaat aactgctcta agaattccct 9180 attttatttg gtaggtaatg gacaatgatc tactgcctaa tatctctagg gcttagtatt 9240 tttctcagtg actttgtggg ttctttgtac tgtaagatta ttaacacttt attgatattt 9300 gattcagcat ttgctccagt ttgtggtttg tatgttgatt ttgaaaattc ttttccatgt 9360 taagaatttg aacattttta tttaataaaa tgtattgcaa aaattttatt aatgatttac 9420 aatccatctt aaatctgcca ttttgtggta tttttgtctc taggtttctc cttacttcta 9480 aaaacattgt atttattgag agtatgctaa tgtcggggat tttcctgggc ataagcacca 9540 caagtaatga gttccagacc ctgccttaat ccaaatgtga ttctggaaag aaaaatcatt 9600 ttacaattgg cctgataata attctgcttg tgttgcacgg gggatacatt gagcagctga 9660 atgaaaatat aagaactttc aaaactaaaa tgacgctcct aaatccttct gtctgcttta 9720 ggactcatgc ttttctagga acgtaaaaat ttggagaatc atttctgtct gtcccacctt 9780 cccaggggca gaaccatttc tgtggtgttc taaggtgtga gtgcatggca gtagtattcc 9840 taaaaattca tactcggttt tctcatgtac ccaactctgt ccctttgtct atgtacattg 9900 ctttaaatca tatttttctg tcacggtgta caaggatgat aaataggtgc caagtggagc 9960 acccaagtgt gatgagcccc cttacggtgg aatggagtga gaagctttct gatctcataa 10020 attgaaggct atcttcagtc attatgtatt ttacataaat taatcctcat ataaccccaa 10080 gaggtaaatt agtataatta tccttcattg ggggtgacaa agttgagaca cagaagaatc 10140 aactcttcca ggatcaacca gtaaaaggca gaccttggat ttgaaccatg caacctggct 10200 caggtatcag ttttaattac tacactctgt actttcaaaa atttgtaaac actttgacaa 10260 tgcatgccaa tttcaagtta tgaagaagca aacgcaattt ttcacatctc tcaaatctaa 10320 tgggtcctca ctatcaagat taaattccag gctgatgaca ctgtaaggcc acatggccag 10380 ctgtgctgga ggcctggtca aggtcagagc ctgggtttgc agagaagcag acaaacagcc 10440 aaaccagcag aattactctg tcttcctgac tcattccctc tacctttttt tctcctagtc 10500 catcctcagg tgactgtgta tcctgcaaag acccagcccc tgcagcacca caacctcctg 10560 gtctgctctg tgagtggttt ctatccaggc agcattgaag tcaggtggtt ccggaacggc 10620 caggaagaga aggctggggt ggtgtccacg ggcctgatcc agaatggaga ctggaccttc 10680 cagaccctgg tgatgctaga aacagttcct cggagtggag aggtttacac ttgccaagtg 10740 gagcacccaa gcgtaacgag cgctctcaca gtggaatgga gtgagcagct ttctgatttc 10800 atacatttct cacccaccaa gaaggggact gtgctaatcc ctgagtgtca ggtttctcct 10860 ctcccacgtc ctattttcat ttgctccatg ttctcatctc catcagcaca ggtcactggg 10920 gatagccctg taacagtgtg tagaaacacc tgtactccct gtggaatcag tcatgctttt 10980 tttttttttg aacctcccca tgatgtcaca ggtcagggtc acccgatctc cccaagctcc 11040 aggccctgct tctgggtctg agactgagtt tctggtgctg ctgctctgag ttacttgttt 11100 tgatctggga agaggggaag cataggggcc tacctgacat gaggggagtc caatctcagc 11160 tctgcctttt attagctctg tcactctaga caaactactt agcctcactg agtctcaggc 11220 tttctgtgga tcagatgttg aacgcttgcc ttacatcaag gctgtaatat ttgaatgagt 11280 ttgatgtcgg aaccttgtaa ctgttcagtg tgatttgaaa tccttttttt ctcccaaaat 11340 ggctagttat tttagttctt gtggggcagc cttcttcccc attttcaaag ctctgaatct 11400 tagagtctca attaaagagg ttcaatttgg aataagcatc actaaacctg gcttcctctc 11460 tcaggagcac ggtctgaatc tgcacagagc aagatgctga gtggagtcgg gggctttgtg 11520 ctgggcctgc tcttccttgg ggccgggctg ttcatctact tcaggaatca gaaaggtgag 11580 gagcctttgg tagctgggcc tttccatagg cttttctgca ggaggaaata gagctttgct 11640 gaggttagtt ctcagtatat gagtggctct gaataaagcc tttctttccc caaacggctc 11700 taatgtcctg ctaatccaga aatcatcagt gcatggttac tatgtgaaag cataatagct 11760 tgtggcctgc agagacaaga ggaaggttaa caagtagggg tcctttggtt tgagatcttg 11820 gagcaaatta aggaagagcc actaaagtta atggaattac actggatcct gtgacagaca 11880 cttcatgctt catgggtcac atggtctgtt tctgctcctc tctgccctgg ttggtgtggg 11940 ttttggtgtt agaactctcc ggtgggagat ctgggactgt gatattgtgt tggaggacag 12000 atttgcttca atatctttta agtgtatatc ttttcctctt tttcccagga cactctggac 12060 ttcagccaac aggtaatacc ttttaatcct cttttagaca cagattcagt ttctccagtg 12120 agaggtgaag ccagctggac ttctgggttg ggtggggact tggagaactt ttctgtctta 12180 caagaggttt ctaaatgcac caatgagtgc tctgtaaaaa cacaccaatg agtgctctgt 12240 aaaaattgac actctgtggc tcgctagatg tttgtaagat ggaccaatca gcactctgta 12300 aaatggacca atccacactc tgtaaaatgg accaatcagc actctttaaa atggaccaat 12360 cagcaggata cgggcgggga caaataaggg aataaaagct ggtcacccta gccagcacct 12420 gcaacctgct taggtccttt tctatgctgt ggaagttttg ttcttttgat cttcacaata 12480 aatcttgtgc tcactctttg ggtccgtgcc acctttaaga gctataacac tcactgcaag 12540 ggtctgtggc ttcactcttg aagtcagcca gaccctgaac ctaccggaag gaacaaactc 12600 aggacacact agaatgatgg tagaggtgat aaggcatgag acagaaataa taggaaagac 12660 tttggatcca aatttctgat caggcaattt acaccaaaac tcctcctctc cacttagaaa 12720 aggcctgtgc tctgcaggac tattggctct gggagactca ggaacttgtt tttcttcttc 12780 ctgcagtgtt ctcatctgag tccttcaaag agggggaaag aaacgttagt agagccaggt 12840 tgaaaacaac actctcctct gtcttttgca 12870 // ID KX687285; SV 1; linear; genomic DNA; STD; HUM; 12870 BP. XX AC KX687285; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH25 MHC class II antigen (HLA-DRB3) gene, DE HLA-DRB3*01_01_02_01v1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-12870 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-12870 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 85835f99541d381d8c7acd4716c41078. XX FH Key Location/Qualifiers FH FT source 1..12870 FT /organism="Homo sapiens" FT /isolate="IH25" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <174..>12072 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*01_01_02_01v1" FT mRNA join(<174..273,7955..8224,10499..10780,11465..11575, FT 12049..>12072) FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*01_01_02_01v1" FT /product="MHC class II antigen" FT CDS join(174..273,7955..8224,10499..10780,11465..11575, FT 12049..>12072) FT /codon_start=1 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*01_01_02_01v1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1A8" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1A8" FT /protein_id="AST15798.1" FT /translation="MVCLKLPGGSSLAALTVTLMVLSSRLAFAGDTRPRFLELRKSECH FT FFNGTERVRYLDRYFHNQEEFLRFDSDVGEYRAVTELGRPVAESWNSQKDLLEQKRGRV FT DNYCRHNYGVGESFTVQRRVHPQVTVYPAKTQPLQHHNLLVCSVSGFYPGSIEVRWFRN FT GQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSALTVEWRARSE FT SAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPT" XX SQ Sequence 12870 BP; 3460 A; 2542 C; 2982 G; 3886 T; 0 other; gctgttgaac tcagatgctg attggttctc cgacacgaga ttacccaatc caggagcaag 60 gaaatcagta acttcctccc tataatttgg aatgtgggtg gaggggggtc atagttctcc 120 ctgagtgaga cttgcctgct cctctggccc ctggtcctgt cctcttctcc agcatggtgt 180 gtctgaagct ccctggaggc tccagcttgg cagcgttgac agtgacactg atggtgctga 240 gctcccgact ggctttcgct ggggacaccc gacgtaagag cacattgagg gtgctgagct 300 actatggggt gggggaatat agggagttgt gttaacattg tgcccaggcc atgtccctta 360 agaaattgtg aggttttctt cagagattgc tcatctttat caagggatcg caaattattt 420 cctccacaaa aggaacttgg ctacttgccc tctccatgag acttgtgtaa ggggcctttg 480 tacaggccat ttcttctcaa atctccacca ataaaacctt tgcatcacat gtactcaggg 540 tctttagagg atttggaaat aaggatgcta aaataaattc cccatacagc aattcccttt 600 attatgttga cttatgtcag acaaaaggag gtttttactg aaaattttgt gggagtcaag 660 ggaattcaaa gggtctctcc tagacgatcc tgggttatgt cctccacagg acctgtggtg 720 ttggcccctc ttcctcatat gtgaggatgg acccagtggc ctccctagta tctcctttct 780 tttctttctg aactccaatg tttataaagc ctgtatccct gtagtgtatg taggttgtct 840 gacagaagtt atacttagtg ctctttcttt cttatgggga aaaatccctg gaactgaagc 900 tgagatcatt agtacttgga atcaccttac agatacagag cacttatgag gtattctttg 960 gtgcctaaag aacttaaggc atcctctgaa aaactggccc aggttagtgt ttattatgaa 1020 tctttttaac ctttctatac ttgtttctcc tacatctcct acatgctcta actagacatg 1080 acagaagaga tttaactaat gtagtataaa ttatatgaaa ttctattttt gtaagtcaaa 1140 aataatcaaa tatcagaaat ttaataatgt tcaaactata tactgtgtgg ggttaccgag 1200 acaatgtgga cattgttcac atctcatagg gctgaaagtc aatgggcaag tcctggaaac 1260 tcattgtctt actgcggtct tgtcctcagt ttcataggtt cacccatcat gccctcagct 1320 ttccttaatt agccatgtct gcttacctct tcctcccatt tctctctatt tttccccaac 1380 tatgttgtca tcatttccag aaatctctaa agcttgcaca gatccttagc actatgagat 1440 ccactgaaag agataatatt tttctctttg agatagggcc tgcctctgtc acccaggctg 1500 tagctcagtg gtgcgatcga ggctcactgc aacctctgcc tcccacactc aagcaatcct 1560 ccctcctcag gctccagagt agctgggaat acaggcaggc aaccacgccc agctaatttt 1620 tgcaattttg gtagagagga gattttgcca tattgcccag gctggtctta aactgctgaa 1680 ctcaagcaat cctcctgcct tagcctccca acatgctagg attatagatg tgagccagtg 1740 tgcccaggca aaagagatga ctcttaataa aaagatttcc tttttcttaa atcactgttc 1800 ctttatccat gaattcttct tccaactaga agaaggagaa agaagtttgc ctgtatttct 1860 caccaggagg agaaggggtc tagtgtgaca tcaaaatgaa agagtgctgg aacttgagcc 1920 ccttcttgct ttccaggatc cccacagtga tcagttccca taccctggtt tatttgtgta 1980 aaccacactt atttttctca gcagctactg tgtactgggt tccattctag gttcaaatca 2040 ttctatttga ttaagataga gagggtccca actctcaagg aagttacaag agtggaggag 2100 acagacacta acccaataag catttaacaa agaagataat gttagagagt catagtgcac 2160 tgaagaaaag acatcagatg tgtgttgaaa gagagaaatg gattcatcta ctttagtttg 2220 tatgtttagg gagctctacc tgagaaagtg atattcagct gagacaacaa aataagtaga 2280 cagtcatgaa gatctaacgg acgaaagttt cagggagacc gaatcgaggg aaagcactgg 2340 tgtgggaaat tatgtggagg gagagaaaga aggctagaag ggctgacgta tagaaagcaa 2400 ggaaatggag aggcagaaga tgaggtagga cacagagagg aagtcaggag cctcatcatt 2460 ataggctctg atgtccacgg taaaaaattt gaattttatt ttatttttat ttatttttaa 2520 attttattta tttatttatt ttgagatgga gtttcattct tgttgcccag gctggagtgc 2580 catggcgcaa tctccactca ctgcaacctc cacctcctgg gttcaagtga ttctcctgcc 2640 tcagcttccc aagtaactgg gattacaggc acccaccacc atacctggct aatttttttg 2700 tatttttagt atacatgggg tatcaccatg ttgaccaggc tggtcttgaa ctcctgacct 2760 cagataatct gtctgccttg gcctcccaaa gtgctgggat tacaggcgtg agccaccacc 2820 cccggactga attttattta aatagatatg agaagctgct gtatggttac aaggagagtc 2880 aatttatatt caacttttgt gtgtgtgtgt gatggagtct cactctgttg cccaggctag 2940 attgcagtgg cacaatctcg gctcactgca acctccgcct cctgggttca agaaattatc 3000 cttcctcagc ctcctgagta gctgggacca caggtgcatg ccaccacagt cggctacttt 3060 ttgtattttt agtagggatg gggtttcacc gtgttagcca agatggtctc gatctcctga 3120 ccttgtgatc cacccacctc ggcctcccaa agtgctggga ttacaggcat gagccactgc 3180 gcccagctta tattcaatta ttacaattaa ttctagctac tttgtgggga ttggattgtt 3240 ggggttcaca agtggttagg aggactattt aggagcacag cagggaattc tccagggaaa 3300 acaggcttgt ggcttcatgg agtgcattag tgataaagac ggtgaaaaag ataaagtgga 3360 caggcttggc atgtattttt gcttagcttg ttaatgaatt actgtaaagg gggtggaaca 3420 atcaagttta ttcctgagga ttttgttttg acaaataagt gggtggtagt tttgtttatt 3480 gagataggaa aaactgtggg aggaaatgat ttgaagtggg tggttggaaa taaaagtttt 3540 gtttaaatta gagatgattt attgacattt atgtagagca atcagaaggt cagtggcatt 3600 taagagactc atggtgaggt gaggctaggg cgtcagatat ttatgttggc ggcatcaata 3660 cgtgtagtgt gttaaattct agggagtgga agaggataca tagggagatg gattgtgtgg 3720 agaaaaaaga agagggcaca ggccagcaaa gtgggctgag acagagccca gggatgttgg 3780 agaaaaacca agagaacata atgcgtgtaa gtcaaggaaa atatattttt ttcagggaga 3840 agggagaggc caattgtggt gagtaccact aagcagaggg ggaagtgaga acgtgacaga 3900 gaagcaagtg ctgggtttgg tggagttgat atttgtagtc aatggagtat ccagggagga 3960 aactggattg gactatttga agagtgagta gaagtgagga cgaggttaag gttgactgtt 4020 ttgagtagaa cttcgggaag gactgtgctc tgggttcagg gagcccgctg aatctaaagg 4080 aaaaggctaa agaagctaaa gagacggagg aagacctgtg aacaagagat gctcagtcat 4140 tagcaaggaa atactggaga gcccctgtgt gcagtggtga ctactcatgc aaaaggtcac 4200 acagccaata tttaacacag ccagtatttc acagagccaa tatttattag tgacatagaa 4260 tataccagtt attactctag gtcatgagag tggtgataaa taaaatgaat ccgctcgcca 4320 tcagtatatg ccatgtaaca gtttgcagtg actgtgtacc aggcctgtga atttctgtat 4380 gcaatttcaa taatgatcct gctgtatctg tggtatttaa aaacatatac atctctggaa 4440 tctaaaattg agaggttata agtaaaaccc agtattagaa atttagtgct ggaaatcaga 4500 ttgcagttta aatctgagca tatagaaagt ccctttcttc tatgtcagca gatgcctttt 4560 atgtgaggtt taggtatact acattattag acataaacca gtgtttctgc cctatgtttt 4620 cagaatgaca attctttatg aaactcatag aagaacagaa gacaattgca aaatcatgaa 4680 gatactaatt gctttagaat taaggaatac aaaaaataat gtgagctaca gttataggga 4740 tcataaaagt taaaatggga atgtatttga gtgtttatta tgtgatcagt gctaagaaga 4800 gtcatcattt aattttacac ttaacagtaa tcctgtgagg attatgctat tattaaatgc 4860 atttgatata ttacaaaaag gcttacggtt ggtaaaaatt gacccaagta gaagaggtca 4920 cctttttatt cagattttct gattgtaggg tttgagagtt tttccatcat tagtgagtag 4980 tgactatatt gtgtctgaat tattgacaga atttctgata ttcatatata ccaggttgtt 5040 tctttgagtg gggacagaga tgcaagggct gctaattcca atgtatagga gaaactttca 5100 atgattttgc atttatcatt ttaaaagttc agtatgtcta taatggtcat gcgttgacaa 5160 acacaaggaa gtgttaaatc actccttctt ctgaggtttg actagcaaat tgggcaagag 5220 ttaccaaata aaacacatgt tcctagttaa atctaaattt cagatacacg accataattt 5280 attggaaatc caaatttaat tgggtaccct ctggttttat ttgccaaatc tgtcaaccct 5340 aagtgggaca catggacatg gattacagtg ctacccatgc aagccacagt gacagcaact 5400 ttacacatgt ttacatttta actttctctc tgtaagaaag tgcttagata atttagggat 5460 aaaaagatag acattgtttg atccagggtg gacacctctc tgccatcgtt tctaaagggc 5520 aaagggagat ttctgcaggt cttgctcaca gtctggggac ctgctcatgt tttgaaactg 5580 tctgtatcag aatgtcattt tcttggtttc tccctttctg aggggacttg actacaaaac 5640 caagagttct gcctctggcc aaggctggaa atgtgatgcc tgctagcatt gttgggagtg 5700 ggagactgag agaaatgagt tagttggggc atttaatggg aataaaatag ctgtggttgt 5760 gattcattac tatagataat tagtggacca gtggcggaga aattaagaaa aaagatgatg 5820 tgaatgataa atgatatgat tagtgactgc ttggtaaggc aaggaaatca ttaaatcttg 5880 gttctcatca agttcatttt ctgaaaagat agcactgtat tgggaccaga attctacaaa 5940 acattctttt tacctaggac caagattttc aagaaatatt tttcaataca attctcagct 6000 gctccataac taatagtagc ttgttcaaca cagatttttt cagatggttc acacctgtag 6060 ttcttaccca gggatagttc accacccctc ccttccctcc catcatcctt ggggaacagt 6120 gacaatgttt ggaacaattt ttggttgtca caacaggggt ttcttctgat atttaatgag 6180 tagaagccag gaacactgct agagaaccta caatgttcag aacagcctcc gccatcaaca 6240 aagaattatc tggtccaaaa tgtcaatagt gctgaggctg agagcactgg ttcacgctgt 6300 gctctttttg aaaattctgc actcacatct gttatacact caccacacag ttgtttttta 6360 tagtttattt ttgcttgttc cattataaaa aaattagaca gttgcataaa ttcaaccact 6420 ttcttgttga atccacttag tcaatgcaag cttaatattt tcatatttag tttttgcctt 6480 atgcaatatt tttcaacatt ttcatgagtt gttggtcatc accatctcta ttaacttcca 6540 acaacttgct cttgtaagtc acaaatagtg atgctgctga aattatttct cagtaacatg 6600 cctcagattt ctgtagtgat tctacatttg atattattca caatgtaaaa tgcttctatg 6660 tactcatttc acttttaccc aaggattatt tttaagttat ttttgtcgtt ttcacacttc 6720 aaacataaag acaaaaacat caaaaatata tactgtgttt tacatatgtg tctattttca 6780 cacatatatg tatgtatgtt tatatgtatg gaaactacag aagcacatgt caccaataag 6840 agctctgaga cacctttgac cacttaccct tatcagatgc gatttgccaa atgagttgtg 6900 gaaacaagtt ttttaaactg aatttctgag ctttgtgaat ttagaaatgc aaaggaaagt 6960 ttgtggacat ttacagggat catggtttta ttgtccttta aactcttcga tactttacca 7020 ttgtcttact ataaatccaa aatcctaacg ccacccacga ggctttcaat acctggcttc 7080 ttgtgatttc tccaggctaa ccttttaccc tccttcccct cagcctctct gctttagtga 7140 actttctcct agttttttga agaagttcat caattcaagc ttttgtacat gggatttcct 7200 aaacctgaaa tgtgcctccc gttttgtcca aacagacacg ggctccactc tgccccctgg 7260 ctcacacctg cttaacctgt caagtcacat ctgaactgtc actcttcaga gggtccttct 7320 ctggcaccct aatgtaattg agatcatcct attattctct gctctagaac ttcccacttc 7380 cgggatttct cattcctgtc taacctcttg tgtgtctggt ttttggccat cgctttcact 7440 gctctttaag ctcccccagc ggagtggaga ggtctgtttt cccttgtttg gattcctaga 7500 ggcagcgcag gcctggcaca aggtcatcac taagaaagtg ttcacaggat gaacgcggtg 7560 ggtgctgttt aaggaaccgg taaacatgtg ggatgagaga aggagcagag tgtctttggg 7620 gtggaggctc ctaggaggag gcggggcggg ctgcggtgcg gggcggatcc tcctccagct 7680 cctgcttgga ggtctccaga acaagctgga ggcagggagg gggtcccaaa agcctgggga 7740 tgagaagggg ttttcccgca tagtccccta ggcccccgtt cgcctgagga aaacggagga 7800 tgagctcctg ggctgcaggt ggtgggcgtt gcgggtgggg ccggttaagg ttcccagtgc 7860 ccgcacccca cccagggagc cccggatggc ggcgtcgctg tcagtgtctt ctcaggaggc 7920 cgcccgtgtg accggatcct tcgtgtaccc gcagcacgtt tcttggagct gcgtaagtct 7980 gagtgtcatt tcttcaatgg gacggagcgg gtgcggtacc tggacagata cttccataac 8040 caggaggagt tcctgcgctt cgacagcgac gtgggggagt accgggcggt gacggagctg 8100 gggcggcctg tcgccgagtc ctggaacagc cagaaggacc tcctggagca gaagcggggc 8160 cgggtggaca attactgcag acacaactac ggggttggtg agagcttcac agtgcagcgg 8220 cgaggtgagc atgtcggggg gcggggcctg ggtccctgtg agctggaaat ctgagagaga 8280 gtgtgtgtgt gtgtgtgtgt gtgtgtgtga gagagagaga gagagaggaa gagacagaga 8340 gagggagcgc gccatctgtg agcatttaga atcctctcaa tcccgagcaa gcagttatga 8400 aggcacaggt gtgtgtgtag agtgtggatt ggtctgtgtc tgtgtgcctg ttgtgggagg 8460 ggaagcagga gggggctgct tcttatcctt ggagacttct gtggagaggt gacaagggag 8520 gtgggtgcgg gcggctggag agagaggaga ccttgattgt cctgggtcct tagagatgca 8580 gggaaggaaa gtgtaaggtg tgtgtgggtg gggtgaaggt ttaggggagg agagctgagg 8640 ggtaaggaag gtttgggata atgtgaggag gccggttcca gactgtccct ggcacacacc 8700 cttcatgtaa tctctgaaat aaaagtgcgt gctgtttgta aaagcattag attaagttct 8760 aggggaattg agtagacctc taaggcacct ctgaaacttc tttaggtata aatttcttgc 8820 tagttttttg tttttctagt gtgtatattt ttacatagta gaaatgacag tgaaactaac 8880 ttttgaatta aagttttaac acagttactg tattattata atgctaatag ttttctagta 8940 gttacatatt attcttttat atataatagt tgtgacacaa cttagggatc actttcccct 9000 ttgttgacct ttattatgac attcaccaaa agttgaaaat gtatgtttct ggttaatttt 9060 taatttatat tttttcattt gaaaaaatgt ggagaggtct gtttttcatt caaaagagtt 9120 cttttgaatt attttgaccg atttattggt caattttaat aactgctcta agaattccct 9180 attttatttg gtaggtaatg gacaatgatc tactgcctaa tatctctagg gcttagtatt 9240 tttctcagtg actttgtggg ttctttgtac tgtaagatta ttaacacttt attgatattt 9300 gattcagcat ttgctccagt ttgtggtttg tatgttgatt ttgaaaattc ttttccatgt 9360 taagaatttg aacattttta tttaataaaa tgtattgcaa aaattttatt aatgatttac 9420 aatccatctt aaatctgcca ttttgtggta tttttgtctc taggtttctc cttacttcta 9480 aaaacattgt atttattgag agtatgctaa tgtcggggat tttcctgggc ataagcacca 9540 caagtaatga gttccagacc ctgccttaat ccaaatgtga ttctggaaag aaaaatcatt 9600 ttacaattgg cctgataata attctgcttg tgttgcacgg gggatacatt gagcagctga 9660 atgaaaatat aagaactttc aaaactaaaa tgacgctcct aaatccttct gtctgcttta 9720 ggactcatgc ttttctagga acgtaaaaat ttggagaatc atttctgtct gtcccacctt 9780 cccaggggca gaaccatttc tgtggtgttc taaggtgtga gtgcatggca gtagtattcc 9840 taaaaattca tactcggttt tctcatgtac ccaactctgt ccctttgtct atgtacattg 9900 ctttaaatca tatttttctg tcacggtgta caaggatgat aaataggtgc caagtggagc 9960 acccaagtgt gatgagcccc cttacggtgg aatggagtga gaagctttct gatctcataa 10020 attgaaggct atcttcagtc attatgtatt ttacataaat taatcctcat ataaccccaa 10080 gaggtaaatt agtataatta tccttcattg ggggtgacaa agttgagaca cagaagaatc 10140 aactcttcca ggatcaacca gtaaaaggca gaccttggat ttgaaccatg caacctggct 10200 caggtatcag ttttaattac tacactctgt actttcaaaa atttgtaaac actttgacaa 10260 tgcatgccaa tttcaagtta tgaagaagca aacgcaattt ttcacatctc tcaaatctaa 10320 tgggtcctca ctatcaagat taaattccag gctgatgaca ctgtaaggcc acatggccag 10380 ctgtgctgga ggcctggtca aggtcagagc ctgggtttgc agagaagcag acaaacagcc 10440 aaaccagcag aattactctg tcttcctgac tcattccctc tacctttttt tctcctagtc 10500 catcctcagg tgactgtgta tcctgcaaag acccagcccc tgcagcacca caacctcctg 10560 gtctgctctg tgagtggttt ctatccaggc agcattgaag tcaggtggtt ccggaacggc 10620 caggaagaga aggctggggt ggtgtccacg ggcctgatcc agaatggaga ctggaccttc 10680 cagaccctgg tgatgctaga aacagttcct cggagtggag aggtttacac ttgccaagtg 10740 gagcacccaa gcgtaacgag cgctctcaca gtggaatgga gtgagcagct ttctgatttc 10800 atacatttct cacccaccaa gaaggggact gtgctaatcc ctgagtgtca ggtttctcct 10860 ctcccacgtc ctattttcat ttgctccatg ttctcatctc catcagcaca ggtcactggg 10920 gatagccctg taacagtgtg tagaaacacc tgtactccct gtggaatcag tcatgctttt 10980 tttttttttg aacctcccca tgatgtcaca ggtcagggtc acccgatctc cccaagctcc 11040 aggccctgct tctgggtctg agactgagtt tctggtgctg ctgctctgag ttacttgttt 11100 tgatctggga agaggggaag cataggggcc tacctgacat gaggggagtc caatctcagc 11160 tctgcctttt attagctctg tcactctaga caaactactt agcctcactg agtctcaggc 11220 tttctgtgga tcagatgttg aacgcttgcc ttacatcaag gctgtaatat ttgaatgagt 11280 ttgatgtcgg aaccttgtaa ctgttcagtg tgatttgaaa tccttttttt ctcccaaaat 11340 ggctagttat tttagttctt gtggggcaga cttcttcccc attttcaaag ctctgaatct 11400 tagagtctca attaaagagg ttcaatttgg aataagcatc actaaacctg gcttcctctc 11460 tcaggagcac ggtctgaatc tgcacagagc aagatgctga gtggagtcgg gggctttgtg 11520 ctgggcctgc tcttccttgg ggccgggctg ttcatctact tcaggaatca gaaaggtgag 11580 gagcctttgg tagctgggcc tttccatagg cttttctgca ggaggaaata gagctttgct 11640 gaggttagtt ctcagtatat gagtggctct gaataaagcc tttctttccc caaacggctc 11700 taatgtcctg ctaatccaga aatcatcagt gcatggttac tatgtgaaag cataatagct 11760 tgtggcctgc agagacaaga ggaaggttaa caagtagggg tcctttggtt tgagatcttg 11820 gagcaaatta aggaagagcc actaaagtta atggaattac actggatcct gtgacagaca 11880 cttcatgctt catgggtcac atggtctgtt tctgctcctc tctgccctgg ttggtgtggg 11940 ttttggtgtt agaactctcc ggtgggagat ctgggactgt gatattgtgt tggaggacag 12000 atttgcttca atatctttta agtgtatatc ttttcctctt tttcccagga cactctggac 12060 ttcagccaac aggtaatacc ttttaatcct cttttagaca cagattcagt ttctccagtg 12120 agaggtgaag ccagctggac ttctgggttg ggtggggact tggagaactt ttctgtctta 12180 caagaggttt ctaaatgcac caatgagtgc tctgtaaaaa cacaccaatg agtgctctgt 12240 aaaaattgac actctgtggc tcgctagatg tttgtaagat ggaccaatca gcactctgta 12300 aaatggacca atccacactc tgtaaaatgg accaatcagc actctttaaa atggaccaat 12360 cagcaggata cgggcgggga caaataaggg aataaaagct ggtcacccta gccagcacct 12420 gcaacctgct taggtccttt tctatgctgt ggaagttttg ttcttttgat cttcacaata 12480 aatcttgtgc tcactctttg ggtccgtgcc acctttaaga gctataacac tcactgcaag 12540 ggtctgtggc ttcactcttg aagtcagcca gaccctgaac ctaccggaag gaacaaactc 12600 aggacacact agaatgatgg tagaggtgat aaggcatgag acagaaataa taggaaagac 12660 tttggatcca aatttctgat caggcaattt acaccaaaac tcctcctctc cacttagaaa 12720 aggcctgtgc tctgcaggac tattggctct gggagactca ggaacttgtt tttcttcttc 12780 ctgcagtgtt ctcatctgag tccttcaaag agggggaaag aaacgttagt agagccaggt 12840 tgaaaacaac actctcctct gtcttttgca 12870 // ID KX687286; SV 1; linear; genomic DNA; STD; HUM; 12868 BP. XX AC KX687286; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH30 MHC class II antigen (HLA-DRB3) gene, DE HLA-DRB3*01_01_02_01v3 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-12868 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-12868 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 2d7998046f34473f35531c49cf46a723. XX FH Key Location/Qualifiers FH FT source 1..12868 FT /organism="Homo sapiens" FT /isolate="IH30" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <174..>12070 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*01_01_02_01v3" FT mRNA join(<174..273,7955..8224,10497..10778,11463..11573, FT 12047..>12070) FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*01_01_02_01v3" FT /product="MHC class II antigen" FT CDS join(174..273,7955..8224,10497..10778,11463..11573, FT 12047..>12070) FT /codon_start=1 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*01_01_02_01v3" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G198" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G198" FT /protein_id="AST15799.1" FT /translation="MVCLKLPGGSSLAALTVTLMVLSSRLAFAGDTRPRFLELRKSECH FT FFNGTERVRYLDRYFHNQEEFLRFDSDVGEYRAVTELGRPVAESWNSQKDLLEQKRGRV FT DNYCRHNYGVGESFTVQRRVHPQVTVYPAKTQPLQHHNLLVCSVSGFYPGSIEVRWFRN FT GQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSALTVEWRARSE FT SAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPT" XX SQ Sequence 12868 BP; 3458 A; 2543 C; 2982 G; 3885 T; 0 other; gctgttgaac tcagatgctg attggttctc cgacacgaga ttacccaatc caggagcaag 60 gaaatcagta acttcctccc tataatttgg aatgtgggtg gaggggggtc atagttctcc 120 ctgagtgaga cttgcctgct cctctggccc ctggtcctgt cctcttctcc agcatggtgt 180 gtctgaagct ccctggaggc tccagcttgg cagcgttgac agtgacactg atggtgctga 240 gctcccgact ggctttcgct ggggacaccc gacgtaagag cacattgagg gtgctgagct 300 actatggggt gggggaatat agggagttgt gttaacattg tgcccaggcc atgtccctta 360 agaaattgtg aggttttctt cagagattgc tcatctttat caagggatcg caaattattt 420 cctccacaaa aggaacttgg ctacttgccc tctccatgag acttgtgtaa ggggcctttg 480 tacaggccat ttcttctcaa atctccacca ataaaacctt tgcatcacat gtactcaggg 540 tctttagagg atttggaaat aaggatgcta aaataaattc cccatacagc aattcccttt 600 attatgttga cttatgtcag acaaaaggag gtttttactg aaaattttgt gggagtcaag 660 ggaattcaaa gggtctctcc tagacgatcc tgggttatgt cctccacagg acctgtggtg 720 ttggcccctc ttcctcatat gtgaggatgg acccagtggc ctccctagta tctcctttct 780 tttctttctg aactccaatg tttataaagc ctgtatccct gtagtgtatg taggttgtct 840 gacagaagtt atacttagtg ctctttcttt cttatgggga aaaatccctg gaactgaagc 900 tgagatcatt agtacttgga atcaccttac agatacagag cacttatgag gtattctttg 960 gtgcctaaag aacttaaggc atcctctgaa aaactggccc aggttagtgt ttattatgaa 1020 tctttttaac ctttctatac ttgtttctcc tacatctcct acatgctcta actagacatg 1080 acagaagaga tttaactaat gtagtataaa ttatatgaaa ttctattttt gtaagtcaaa 1140 aataatcaaa tatcagaaat ttaataatgt tcaaactata tactgtgtgg ggttaccgag 1200 acaatgtgga cattgttcac atctcatagg gctgaaagtc aatgggcaag tcctggaaac 1260 tcattgtctt actgcggtct tgtcctcagt ttcataggtt cacccatcat gccctcagct 1320 ttccttaatt agccatgtct gcttacctct tcctcccatt tctctctatt tttccccaac 1380 tatgttgtca tcatttccag aaatctctaa agcttgcaca gatccttagc actatgagat 1440 ccactgaaag agataatatt tttctctttg agatagggcc tgcctctgtc acccaggctg 1500 tagctcagtg gtgcgatcga ggctcactgc aacctctgcc tcccacactc aagcaatcct 1560 ccctcctcag gctccagagt agctgggaat acaggcaggc aaccacgccc agctaatttt 1620 tgcaattttg gtagagagga gattttgcca tattgcccag gctggtctta aactgctgaa 1680 ctcaagcaat cctcctgcct tagcctccca acatgctagg attatagatg tgagccagtg 1740 tgcccaggca aaagagatga ctcttaataa aaagatttcc tttttcttaa atcactgttc 1800 ctttatccat gaattcttct tccaactaga agaaggagaa agaagtttgc ctgtatttct 1860 caccaggagg agaaggggtc tagtgtgaca tcaaaatgaa agagtgctgg aacttgagcc 1920 ccttcttgct ttccaggatc cccacagtga tcagttccca taccctggtt tatttgtgta 1980 aaccacactt atttttctca gcagctactg tgtactgggt tccattctag gttcaaatca 2040 ttctatttga ttaagataga gagggtccca actctcaagg aagttacaag agtggaggag 2100 acagacacta acccaataag catttaacaa agaagataat gttagagagt catagtgcac 2160 tgaagaaaag acatcagatg tgtgttgaaa gagagaaatg gattcatcta ctttagtttg 2220 tatgtttagg gagctctacc tgagaaagtg atattcagct gagacaacaa aataagtaga 2280 cagtcatgaa gatctaacgg acgaaagttt cagggagacc gaatcgaggg aaagcactgg 2340 tgtgggaaat tatgtggagg gagagaaaga aggctagaag ggctgacgta tagaaagcaa 2400 ggaaatggag aggcagaaga tgaggtagga cacagagagg aagtcaggag cctcatcatt 2460 ataggctctg atgtccacgg taaaaaattt gaattttatt ttatttttat ttatttttaa 2520 attttattta tttatttatt ttgagatgga gtttcattct tgttgcccag gctggagtgc 2580 catggcgcaa tctccactca ctgcaacctc cacctcctgg gttcaagtga ttctcctgcc 2640 tcagcttccc aagtaactgg gattacaggc acccaccacc atacctggct aatttttttg 2700 tatttttagt atacatgggg tatcaccatg ttgaccaggc tggtcttgaa ctcctgacct 2760 cagataatct gtctgccttg gcctcccaaa gtgctgggat tacaggcgtg agccaccacc 2820 cccggactga attttattta aatagatatg agaagctgct gtatggttac aaggagagtc 2880 aatttatatt caacttttgt gtgtgtgtgt gatggagtct cactctgttg cccaggctag 2940 attgcagtgg cacaatctcg gctcactgca acctccgcct cctgggttca agaaattatc 3000 cttcctcagc ctcctgagta gctgggacca caggtgcatg ccaccacagt cggctacttt 3060 ttgtattttt agtagggatg gggtttcacc gtgttagcca agatggtctc gatctcctga 3120 ccttgtgatc cacccgcctc ggcctcccaa agtgctggga ttacaggcat gagccactgc 3180 gcccagctta tattcaatta ttacaattaa ttctagctac tttgtgggga ttggattgtt 3240 ggggttcaca agtggttagg aggactattt aggagcacag cagggaattc tccagggaaa 3300 acaggcttgt ggcttcatgg agtgcattag tgataaagac ggtgaaaaag ataaagtgga 3360 caggcttggc atgtattttt gcttagcttg ttaatgaatt actgtaaagg gggtggaaca 3420 atcaagttta ttcctgagga ttttgttttg acaaataagt gggtggtagt tttgtttatt 3480 gagataggaa aaactgtggg aggaaatgat ttgaagtggg tggttggaaa taaaagtttt 3540 gtttaaatta gagatgattt attgacattt atgtagagca atcagaaggt cagtggcatt 3600 taagagactc atggtgaggt gaggctaggg cgtcagatat ttatgttggc ggcatcaata 3660 cgtgtagtgt gttaaattct agggagtgga agaggataca tagggagatg gattgtgtgg 3720 agaaaaaaga agagggcaca ggccagcaaa gtgggctgag acagagccca gggatgttgg 3780 agaaaaacca agagaacata atgcgtgtaa gtcaaggaaa atatattttt ttcagggaga 3840 agggagaggc caattgtggt gagtaccact aagcagaggg ggaagtgaga acgtgacaga 3900 gaagcaagtg ctgggtttgg tggagttgat atttgtagtc aatggagtat ccagggagga 3960 aactggattg gactatttga agagtgagta gaagtgagga cgaggttaag gttgactgtt 4020 ttgagtagaa cttcgggaag gactgtgctc tgggttcagg gagcccgctg aatctaaagg 4080 aaaaggctaa agaagctaaa gagacggagg aagacctgtg aacaagagat gctcagtcat 4140 tagcaaggaa atactggaga gcccctgtgt gcagtggtga ctactcatgc aaaaggtcac 4200 acagccaata tttaacacag ccagtatttc acagagccaa tatttattag tgacatagaa 4260 tataccagtt attgctctag gtcatgagag tggtgataaa taaaatgaat ccgctcgcca 4320 tcagtatatg ccatgtaaca gtttgcagtg actgtgtacc aggcctgtga atttctgtat 4380 gcaatttcaa taatgatcct gctgtatctg tggtatttaa aaacatatac atctctggaa 4440 tctaaaattg agaggttata agtaaaaccc agtattagaa atttagtgct ggaaatcaga 4500 ttgcagttta aatctgagca tatagaaagt ccctttcttc tatgtcagca gatgcctttt 4560 atgtgaggtt taggtatact acattattag acataaacca gtgtttctgc cctatgtttt 4620 cagaatgaca attctttatg aaactcatag aagaacagaa gacaattgca aaatcatgaa 4680 gatactaatt gctttagaat taaggaatac aaaaaataat gtgagctaca gttataggga 4740 tcataaaagt taaaatggga atgtatttga gtgtttatta tgtgatcagt gctaagaaga 4800 gtcatcattt aattttacac ttaacagtaa tcctgtgagg attatgctat tattaaatgc 4860 atttgatata ttacaaaaag gcttacggtt ggtaaaaatt gacccaagta gaagaggtca 4920 cctttttatt cagattttct gattgtaggg tttgagagtt tttccatcat tagtgagtag 4980 tgactatatt gtgtctgaat tattgacaga atttctgata ttcatatata ccaggttgtt 5040 tctttgagtg gggacagaga tgcaagggct gctaattcca atgtatagga gaaactttca 5100 atgattttgc atttatcatt ttaaaagttc agtatgtcta taatggtcat gcgttgacaa 5160 acacaaggaa gtattaaatc actccttctt ctgaggtttg actagcaaat tgggcaagag 5220 ttaccaaata aaacacatgt tcctagttaa atctaaattt cagatacacg accataattt 5280 attggaaatc caaatttaat tgggtaccct ctggttttat ttgccaaatc tgtcaaccct 5340 aagtgggaca catggacatg gattacagtg ctacccatgc aagccacagt gacagcaact 5400 ttacacatgt ttacatttta actttctctc tgtaagaaag tgcttagata atttagggat 5460 aaaaagatag acattgtttg atccagggtg gacacctctc tgccatcgtt tctaaagggc 5520 aaagggagat ttctgcaggt cttgctcaca gtctggggac ctgctcatgt tttgaaactg 5580 tctgtatcag aatgtcattt tcttggtttc tccctttctg aggggacttg actacaaaac 5640 caagagttct gcctctggcc aaggctggaa atgtgatgcc tgctagcatt gttgggagtg 5700 ggagactgag agaaatgagt tagttggggc atttaatggg aataaaatag ctgtggttgt 5760 gattcattac tatagataat tagtggacca gtggcggaga aattaagaaa aaagatgatg 5820 tgaatgataa atgatatgat tagtgactgc ttggtaaggc aaggaaatca ttaaatcttg 5880 gttctcatca agttcatttt ctgaaaagat agcactgtat tgggaccaga attctacaaa 5940 acattctttt tacctaggac caagattttc aagaaatatt tttcaataca attctcagct 6000 gctccataac taatagtagc ttgttcaaca cagatttttt cagatggttc acacctgtag 6060 ttcttaccca gggatagttc accacccctc ccttccctcc catcatcctt ggggaacagt 6120 gacaatgttt ggaacaattt ttggttgtca caacaggggt ttcttctgat atttaatgag 6180 tagaagccag gaacactgct agagaaccta caatgttcag aacagcctcc gccatcaaca 6240 aagaattatc tggtccaaaa tgtcaatagt gctgaggctg agagcactgg ttcacgctgt 6300 gctctttttg aaaattctac actcacatct gttatacact caccacacag ttgtttttta 6360 tagtttattt ttgcttgttc cattataaaa aaattagaca gttgcataaa ttcaaccact 6420 ttcttgttga atccacttag tcaatgcaag cttaatattt tcatatttag tttttgcctt 6480 atgcaatatt tttcaacatt ttcatgagtt gttggtcatc accatctcta ttaacttcca 6540 acaacttgct cttgtaagtc acaaatagtg atgctgctga aattatttct cagtaacatg 6600 cctcagattt ctgtagtgat tctacatttg atattattca caatgtaaaa tgcttctatg 6660 tactcatttc acttttaccc aaggattatt tttaagttat ttttgtcgtt ttcacacttc 6720 aaacataaag acaaaaacat caaaaatata tactgtgttt tacatatgtg tctattttca 6780 cacatatatg tatgtatgtt tatatgtatg gaaactacag aagcacatgt cgccaataag 6840 agctctgaga cacctttgac cacttaccct tatcagatgc gatttgccaa atgagttgtg 6900 gaaacaagtt ttttaaactg aatttctgag ctttgtgaat ttagaaatgc aaaggaaagt 6960 ttgtggacat ttacagggat catggtttta ttgtccttta aactcttcga tactttacca 7020 ttgtcttact ataaatccaa aatcctaacg ccacccacga ggctttcaat acctggcttc 7080 ttgtgatttc tccaggctaa ccttttaccc tccttcccct cagcctctct gctttagtga 7140 actttctcct agttttttga agaagttcat caattcaagc ttttgtacat gggatttcct 7200 aaacctgaaa tgtgcctccc gttttgtcca aacagacacg ggctccactc tgccccctgg 7260 ctcacacctg cttaacctgt caagtcacat ctgaactgtc actcttcaga gggtccttct 7320 ctggcaccct aatgtaattg agatcatcct attattctct gctctagaac ttcccacttc 7380 cgggatttct cattcctgtc taacctcttg tgtgtctggt ttttggccat cgctttcact 7440 gctctttaag ctcccccagc ggagtggaga ggtctgtttt cccttgtttg gattcctaga 7500 ggcagcgcag gcctggcaca aggtcatcac taagaaagtg ttcacaggat gaacgcggtg 7560 ggtgctgttt aaggaaccgg taaacatgtg ggatgagaga aggagcagag tgtctttggg 7620 gtggaggctc ctaggaggag gcggggcggg ctgcggtgcg gggcggatcc tcctccagct 7680 cctgcttgga ggtctccaga acaagctgga ggcagggagg gggtcccaaa agcctgggga 7740 tgagaagggg ttttcccgca tagtccccta ggcccccgtt cgcctgagga aaacggagga 7800 tgagctcctg ggctgcaggt ggtgggcgtt gcgggtgggg ccggttaagg ttcccagtgc 7860 ccgcacccca cccagggagc cccggatggc ggcgtcgctg tcagtgtctt ctcaggaggc 7920 cgcccgtgtg accggatcct tcgtgtaccc gcagcacgtt tcttggagct gcgtaagtct 7980 gagtgtcatt tcttcaatgg gacggagcgg gtgcggtacc tggacagata cttccataac 8040 caggaggagt tcctgcgctt cgacagcgac gtgggggagt accgggcggt gacggagctg 8100 gggcggcctg tcgccgagtc ctggaacagc cagaaggacc tcctggagca gaagcggggc 8160 cgggtggaca attactgcag acacaactac ggggttggtg agagcttcac agtgcagcgg 8220 cgaggtgagc atgtcggggg gcggggcctg ggtccctgtg agctggaaat ctgagagaga 8280 gtgtgtgtgt gtgtgtgtgt gtgtgtgaga gagagagaga gagaggaaga gacagagaga 8340 gggagcgcgc catctgtgag catttagaat cctctcaatc ccgagcaagc agttatgaag 8400 gcacaggtgt gtgtgtagag tgtggattgg tctgtgtctg tgtgcctgtt gtgggagggg 8460 aagcaggagg gggctgcttc ttatccttgg agacttctgt ggagaggtga caagggaggt 8520 gggtgcgggc ggctggagag agaggagacc ttgattgtcc tgggtcctta gagatgcagg 8580 gaaggaaagt gtaaggtgtg tgtgggtggg gtgaaggttt aggggaggag agctgagggg 8640 taaggaaggt ttgggataat gtgaggaggc cggttccaga ctgtccctgg cacacaccct 8700 tcatgtaatc tctgaaataa aagtgcgtgc tgtttgtaaa agcattagat taagttctag 8760 gggaattgag tagacctcta aggcacctct gaaacttctt taggtataaa tttcttgcta 8820 gttttttgtt tttctagtgt gtatattttt acatagtaga aatgacagtg aaactaactt 8880 ttgaattaaa gttttaacac agttactgta ttattataat gctaatagtt ttctagtagt 8940 tacatattat tcttttatat ataatagttg tgacacaact tagggatcac tttccccttt 9000 gttgaccttt attatgacat tcaccaaaag ttgaaaatgt atgtttctgg ttaattttta 9060 atttatattt tttcatttga aaaaatgtgg agaggtctgt ttttcattca aaagagttct 9120 tttgaattat tttgaccgat ttattggtca attttaataa ctgctctaag aattccctat 9180 tttatttggt aggtaatgga caatgatcta ctgcctaata tctctagggc ttagtatttt 9240 tctcagtgac tttgtgggtt ctttgtactg taagattatt aacactttat tgatatttga 9300 ttcagcattt gctccagttt gtggtttgta tgttgatttt gaaaattctt ttccatgtta 9360 agaatttgaa catttttatt taataaaatg tattgcaaaa attttattaa tgatttacaa 9420 tccatcttaa atctgccatt ttgtggtatt tttgtctcta ggtttctcct tacttctaaa 9480 aacattgtat ttattgagag tatgctaatg tcggggattt tcctgggcat aagcaccaca 9540 agtaatgagt tccagaccct gccttaatcc aaatgtgatt ctggaaagaa aaatcatttt 9600 acaattggcc tgataataat tctgcttgtg ttgcacgggg gatacattga gcagctgaat 9660 gaaaatataa gaactttcaa aactaaaatg acgctcctaa atccttctgt ctgctttagg 9720 actcatgctt ttctaggaac gtaaaaattt ggagaatcat ttctgtctgt cccaccttcc 9780 caggggcaga accatttctg tggtgttcta aggtgtgagt gcatggcagt agtattccta 9840 aaaattcata ctcggttttc tcatgtaccc aactctgtcc ctttgtctat gtacattgct 9900 ttaaatcata tttttctgtc acggtgtaca aggatgataa ataggtgcca agtggagcac 9960 ccaagtgtga tgagccccct tacggtggaa tggagtgaga agctttctga tctcataaat 10020 tgaaggctat cttcagtcat tatgtatttt acataaatta atcctcatat aaccccaaga 10080 ggtaaattag tataattatc cttcattggg ggtgacaaag ttgagacaca gaagaatcaa 10140 ctcttccagg atcaaccagt aaaaggcaga ccttggattt gaaccatgca acctggctca 10200 ggtatcagtt ttaattacta cactctgtac tttcaaaaat ttgtaaacac tttgacaatg 10260 catgccaatt tcaagttatg aagaagcaaa cgcaattttt cacatctctc aaatctaatg 10320 ggtcctcact atcaagatta aattccaggc tgatgacact gtaaggccac atggccagct 10380 gtgctggagg cctggtcaag gtcagagcct gggtttgcag agaagcagac aaacagccaa 10440 accagcagaa ttactctgtc ttcctgactc attccctcta cctttttttc tcctagtcca 10500 tcctcaggtg actgtgtatc ctgcaaagac ccagcccctg cagcaccaca acctcctggt 10560 ctgctctgtg agtggtttct atccaggcag cattgaagtc aggtggttcc ggaacggcca 10620 ggaagagaag gctggggtgg tgtccacggg cctgatccag aatggagact ggaccttcca 10680 gaccctggtg atgctagaaa cagttcctcg gagtggagag gtttacactt gccaagtgga 10740 gcacccaagc gtaacgagcg ctctcacagt ggaatggagt gagcagcttt ctgatttcat 10800 acatttctca cccaccaaga aggggactgt gctaatccct gagtgtcagg tttctcctct 10860 cccacgtcct attttcattt gctccatgtt ctcatctcca tcagcacagg tcactgggga 10920 tagccctgta acagtgtgta gaaacacctg tactccctgt ggaatcagtc atgctttttt 10980 tttttttgaa cctccccatg atgtcacagg tcagggtcac ccgatctccc caagctccag 11040 gccctgcttc tgggtctgag actgagtttc tggtgctgct gctctgagtt acttgttttg 11100 atctgggaag aggggaagca taggggccta cctgacatga ggggagtcca atctcagctc 11160 tgccttttat tagctctgtc actctagaca aactacttag cctcactgag tctcaggctt 11220 tctgtggatc agatgttgaa cgcttgcctt acatcaaggc tgtaatattt gaatgagttt 11280 gatgtcggaa ccttgtaact gttcagtgtg atttgaaatc ctttttttct cccaaaatgg 11340 ctagttattt tagttcttgt ggggcagcct tcttccccat tttcaaagct ctgaatctta 11400 gagtctcaat taaagaggtt caatttggaa taagcatcac taaacctggc ttcctctctc 11460 aggagcacgg tctgaatctg cacagagcaa gatgctgagt ggagtcgggg gctttgtgct 11520 gggcctgctc ttccttgggg ccgggctgtt catctacttc aggaatcaga aaggtgagga 11580 gcctttggta gctgggcctt tccataggct tttctgcagg aggaaataga gctttgctga 11640 ggttagttct cagtatatga gtggctctga ataaagcctt tctttcccca aacggctcta 11700 atgtcctgct aatccagaaa tcatcagtgc atggttacta tgtgaaagca taatagcttg 11760 tggcctgcag agacaagagg aaggttaaca agtaggggtc ctttggtttg agatcttgga 11820 gcaaattaag gaagagccac taaagttaat ggaattacac tggatcctgt gacagacact 11880 tcatgcttca tgggtcacat ggtctgtttc tgctcctctc tgccctggtt ggtgtgggtt 11940 ttggtgttag aactctccgg tgggagatct gggactgtga tattgtgttg gaggacagat 12000 ttgcttcaat atcttttaag tgtatatctt ttcctctttt tcccaggaca ctctggactt 12060 cagccaacag gtaatacctt ttaatcctct tttagacaca gattcagttt ctccagtgag 12120 aggtgaagcc agctggactt ctgggttggg tggggacttg gagaactttt ctgtcttaca 12180 agaggtttct aaatgcacca atgagtgctc tgtaaaaaca caccaatgag tgctctgtaa 12240 aaattgacac tctgtggctc gctagatgtt tgtaagatgg accaatcagc actctgtaaa 12300 atggaccaat ccacactctg taaaatggac caatcagcac tctttaaaat ggaccaatca 12360 gcaggatacg ggcggggaca aataagggaa taaaagctgg tcaccctagc cagcacctgc 12420 aacctgctta ggtccttttc tatgctgtgg aagttttgtt cttttgatct tcacaataaa 12480 tcttgtgctc actctttggg tccgtgccac ctttaagagc tataacactc actgcaaggg 12540 tctgtggctt cactcttgaa gtcagccaga ccctgaacct accggaagga acaaactcag 12600 gacacactag aatgatggta gaggtgataa ggcatgagac agaaataata ggaaagactt 12660 tggatccaaa tttctgatca ggcaatttac accaaaactc ctcctctcca cttagaaaag 12720 gcctgtgctc tgcaggacta ttggctctgg gagactcagg aacttgtttt tcttcttcct 12780 gcagtgttct catctgagtc cttcaaagag ggggaaagaa acgttagtag agccaggttg 12840 aaaacaacac tctcctctgt cttttgca 12868 // ID KX687287; SV 1; linear; genomic DNA; STD; HUM; 12870 BP. XX AC KX687287; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH32 MHC class II antigen (HLA-DRB3) gene, DE HLA-DRB3*01_01_02_01v4 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-12870 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-12870 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 0100f2c9cb5b265771970dfe36260ecd. XX FH Key Location/Qualifiers FH FT source 1..12870 FT /organism="Homo sapiens" FT /isolate="IH32" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <174..>12072 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*01_01_02_01v4" FT mRNA join(<174..273,7955..8224,10499..10780,11465..11575, FT 12049..>12072) FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*01_01_02_01v4" FT /product="MHC class II antigen" FT CDS join(174..273,7955..8224,10499..10780,11465..11575, FT 12049..>12072) FT /codon_start=1 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*01_01_02_01v4" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1B0" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1B0" FT /protein_id="AST15800.1" FT /translation="MVCLKLPGGSSLAALTVTLMVLSSRLAFAGDTRPRFLELRKSECH FT FFNGTERVRYLDRYFHNQEEFLRFDSDVGEYRAVTELGRPVAESWNSQKDLLEQKRGRV FT DNYCRHNYGVGESFTVQRRVHPQVTVYPAKTQPLQHHNLLVCSVSGFYPGSIEVRWFRN FT GQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSALTVEWRARSE FT SAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPT" XX SQ Sequence 12870 BP; 3458 A; 2544 C; 2983 G; 3885 T; 0 other; gctgttgaac tcagatgctg attggttctc cgacacgaga ttacccaatc caggagcaag 60 gaaatcagta acttcctccc tataatttgg aatgtgggtg gaggggggtc atagttctcc 120 ctgagtgaga cttgcctgct cctctggccc ctggtcctgt cctcttctcc agcatggtgt 180 gtctgaagct ccctggaggc tccagcttgg cagcgttgac agtgacactg atggtgctga 240 gctcccgact ggctttcgct ggggacaccc gacgtaagag cacattgagg gtgctgagct 300 actatggggt gggggaatat agggagttgt gttaacattg tgcccaggcc atgtccctta 360 agaaattgtg aggttttctt cagagattgc tcatctttat caagggatcg caaattattt 420 cctccacaaa aggaacttgg ctacttgccc tctccatgag acttgtgtaa ggggcctttg 480 tacaggccat ttcttctcaa atctccacca ataaaacctt tgcatcacat gtactcaggg 540 tctttagagg atttggaaat aaggatgcta aaataaattc cccatacagc aattcccttt 600 attatgttga cttatgtcag acaaaaggag gtttttactg aaaattttgt gggagtcaag 660 ggaattcaaa gggtctctcc tagacgatcc tgggttatgt cctccacagg acctgtggtg 720 ttggcccctc ttcctcatat gtgaggatgg acccagtggc ctccctagta tctcctttct 780 tttctttctg aactccaatg tttataaagc ctgtatccct gtagtgtatg taggttgtct 840 gacagaagtt atacttagtg ctctttcttt cttatgggga aaaatccctg gaactgaagc 900 tgagatcatt agtacttgga atcaccttac agatacagag cacttatgag gtattctttg 960 gtgcctaaag aacttaaggc atcctctgaa aaactggccc aggttagtgt ttattatgaa 1020 tctttttaac ctttctatac ttgtttctcc tacatctcct acatgctcta actagacatg 1080 acagaagaga tttaactaat gtagtataaa ttatatgaaa ttctattttt gtaagtcaaa 1140 aataatcaaa tatcagaaat ttaataatgt tcaaactata tactgtgtgg ggttaccgag 1200 acaatgtgga cattgttcac atctcatagg gctgaaagtc aatgggcaag tcctggaaac 1260 tcattgtctt actgcggtct tgtcctcagt ttcataggtt cacccatcat gccctcagct 1320 ttccttaatt agccatgtct gcttacctct tcctcccatt tctctctatt tttccccaac 1380 tatgttgtca tcatttccag aaatctctaa agcttgcaca gatccttagc actatgagat 1440 ccactgaaag agataatatt tttctctttg agatagggcc tgcctctgtc acccaggctg 1500 tagctcagtg gtgcgatcga ggctcactgc aacctctgcc tcccacactc aagcaatcct 1560 ccctcctcag gctccagagt agctgggaat acaggcaggc aaccacgccc agctaatttt 1620 tgcaattttg gtagagagga gattttgcca tattgcccag gctggtctta aactgctgaa 1680 ctcaagcaat cctcctgcct tagcctccca acatgctagg attatagatg tgagccagtg 1740 tgcccaggca aaagagatga ctcttaataa aaagatttcc tttttcttaa atcactgttc 1800 ctttatccat gaattcttct tccaactaga agaaggagaa agaagtttgc ctgtatttct 1860 caccaggagg agaaggggtc tagtgtgaca tcaaaatgaa agagtgctgg aacttgagcc 1920 ccttcttgct ttccaggatc cccacagtga tcagttccca taccctggtt tatttgtgta 1980 aaccacactt atttttctca gcagctactg tgtactgggt tccattctag gttcaaatca 2040 ttctatttga ttaagataga gagggtccca actctcaagg aagttacaag agtggaggag 2100 acagacacta acccaataag catttaacaa agaagataat gttagagagt catagtgcac 2160 tgaagaaaag acatcagatg tgtgttgaaa gagagaaatg gattcatcta ctttagtttg 2220 tatgtttagg gagctctacc tgagaaagtg atattcagct gagacaacaa aataagtaga 2280 cagtcatgaa gatctaacgg acgaaagttt cagggagacc gaatcgaggg aaagcactgg 2340 tgtgggaaat tatgtggagg gagagaaaga aggctagaag ggctgacgta tagaaagcaa 2400 ggaaatggag aggcagaaga tgaggtagga cacagagagg aagtcaggag cctcatcatt 2460 ataggctctg atgtccacgg taaaaaattt gaattttatt ttatttttat ttatttttaa 2520 attttattta tttatttatt ttgagatgga gtttcattct tgttgcccag gctggagtgc 2580 catggcgcaa tctccactca ctgcaacctc cacctcctgg gttcaagtga ttctcctgcc 2640 tcagcttccc aagtaactgg gattacaggc acccaccacc atacctggct aatttttttg 2700 tatttttagt atacatgggg tatcaccatg ttgaccaggc tggtcttgaa ctcctgacct 2760 cagataatct gtctgccttg gcctcccaaa gtgctgggat tacaggcgtg agccaccacc 2820 cccggactga attttattta aatagatatg agaagctgct gtatggttac aaggagagtc 2880 aatttatatt caacttttgt gtgtgtgtgt gatggagtct cactctgttg cccaggctag 2940 attgcagtgg cacaatctcg gctcactgca acctccgcct cctgggttca agaaattatc 3000 cttcctcagc ctcctgagta gctgggacca caggtgcatg ccaccacagt cggctacttt 3060 ttgtattttt agtagggatg gggtttcacc gtgttagcca agatggtctc gatctcctga 3120 ccttgtgatc cacccgcctc ggcctcccaa agtgctggga ttacaggcat gagccactgc 3180 gcccagctta tattcaatta ttacaattaa ttctagctac tttgtgggga ttggattgtt 3240 ggggttcaca agtggttagg aggactattt aggagcacag cagggaattc tccagggaaa 3300 acaggcttgt ggcttcatgg agtgcattag tgataaagac ggtgaaaaag ataaagtgga 3360 caggcttggc atgtattttt gcttagcttg ttaatgaatt actgtaaagg gggtggaaca 3420 atcaagttta ttcctgagga ttttgttttg acaaataagt gggtggtagt tttgtttatt 3480 gagataggaa aaactgtggg aggaaatgat ttgaagtggg tggttggaaa taaaagtttt 3540 gtttaaatta gagatgattt attgacattt atgtagagca atcagaaggt cagtggcatt 3600 taagagactc atggtgaggt gaggctaggg cgtcagatat ttatgttggc ggcatcaata 3660 cgtgtagtgt gttaaattct agggagtgga agaggataca tagggagatg gattgtgtgg 3720 agaaaaaaga agagggcaca ggccagcaaa gtgggctgag acagagccca gggatgttgg 3780 agaaaaacca agagaacata atgcgtgtaa gtcaaggaaa atatattttt ttcagggaga 3840 agggagaggc caattgtggt gagtaccact aagcagaggg ggaagtgaga acgtgacaga 3900 gaagcaagtg ctgggtttgg tggagttgat atttgtagtc aatggagtat ccagggagga 3960 aactggattg gactatttga agagtgagta gaagtgagga cgaggttaag gttgactgtt 4020 ttgagtagaa cttcgggaag gactgtgctc tgggttcagg gagcccgctg aatctaaagg 4080 aaaaggctaa agaagctaaa gagacggagg aagacctgtg aacaagagat gctcagtcat 4140 tagcaaggaa atactggaga gcccctgtgt gcagtggtga ctactcatgc aaaaggtcac 4200 acagccaata tttaacacag ccagtatttc acagagccaa tatttattag tgacatagaa 4260 tataccagtt attgctctag gtcatgagag tggtgataaa taaaatgaat ccgctcgcca 4320 tcagtatatg ccatgtaaca gtttgcagtg actgtgtacc aggcctgtga atttctgtat 4380 gcaatttcaa taatgatcct gctgtatctg tggtatttaa aaacatatac atctctggaa 4440 tctaaaattg agaggttata agtaaaaccc agtattagaa atttagtgct ggaaatcaga 4500 ttgcagctta aatctgagca tatagaaagt ccctttcttc tatgtcagca gatgcctttt 4560 atgtgaggtt taggtatact acattattag acataaacca gtgtttctgc cctatgtttt 4620 cagaatgaca attctttatg aaactcatag aagaacagaa gacaattgca aaatcatgaa 4680 gatactaatt gctttagaat taaggaatac aaaaaataat gtgagctaca gttataggga 4740 tcataaaagt taaaatggga atgtatttga gtgtttatta tgtgatcagt gctaagaaga 4800 gtcatcattt aattttacac ttaacagtaa tcctgtgagg attatgctat tattaaatgc 4860 atttgatata ttacaaaaag gcttacggtt ggtaaaaatt gacccaagta gaagaggtca 4920 cctttttatt cagattttct gattgtaggg tttgagagtt tttccatcat tagtgagtag 4980 tgactatatt gtgtctgaat tattgacaga atttctgata ttcatatata ccaggttgtt 5040 tctttgagtg gggacagaga tgcaagggct gctaattcca atgtatagga gaaactttca 5100 atgattttgc atttatcatt ttaaaagttc agtatgtcta taatggtcat gcgttgacaa 5160 acacaaggaa gtattaaatc actccttctt ctgaggtttg actagcaaat tgggcaagag 5220 ttaccaaata aaacacatgt tcctagttaa atctaaattt cagatacacg accataattt 5280 attggaaatc caaatttaat tgggtaccct ctggttttat ttgccaaatc tgtcaaccct 5340 aagtgggaca catggacatg gattacagtg ctacccatgc aagccacagt gacagcaact 5400 ttacacatgt ttacatttta actttctctc tgtaagaaag tgcttagata atttagggat 5460 aaaaagatag acattgtttg atccagggtg gacacctctc tgccatcgtt tctaaagggc 5520 aaagggagat ttctgcaggt cttgctcaca gtctggggac ctgctcatgt tttgaaactg 5580 tctgtatcag aatgtcattt tcttggtttc tccctttctg aggggacttg actacaaaac 5640 caagagttct gcctctggcc aaggctggaa atgtgatgcc tgctagcatt gttgggagtg 5700 ggagactgag agaaatgagt tagttggggc atttaatggg aataaaatag ctgtggttgt 5760 gattcattac tatagataat tagtggacca gtggcggaga aattaagaaa aaagatgatg 5820 tgaatgataa atgatatgat tagtgactgc ttggtaaggc aaggaaatca ttaaatcttg 5880 gttctcatca agttcatttt ctgaaaagat agcactgtat tgggaccaga attctacaaa 5940 acattctttt tacctaggac caagattttc aagaaatatt tttcaataca attctcagct 6000 gctccataac taatagtagc ttgttcaaca cagatttttt cagatggttc acacctgtag 6060 ttcttaccca gggatagttc accacccctc ccttccctcc catcatcctt ggggaacagt 6120 gacaatgttt ggaacaattt ttggttgtca caacaggggt ttcttctgat atttaatgag 6180 tagaagccag gaacactgct agagaaccta caatgttcag aacagcctcc gccatcaaca 6240 aagaattatc tggtccaaaa tgtcaatagt gctgaggctg agagcactgg ttcacgctgt 6300 gctctttttg aaaattctac actcacatct gttatacact caccacacag ttgtttttta 6360 tagtttattt ttgcttgttc cattataaaa aaattagaca gttgcataaa ttcaaccact 6420 ttcttgttga atccacttag tcaatgcaag cttaatattt tcatatttag tttttgcctt 6480 atgcaatatt tttcaacatt ttcatgagtt gttggtcatc accatctcta ttaacttcca 6540 acaacttgct cttgtaagtc acaaatagtg atgctgctga aattatttct cagtaacatg 6600 cctcagattt ctgtagtgat tctacatttg atattattca caatgtaaaa tgcttctatg 6660 tactcatttc acttttaccc aaggattatt tttaagttat ttttgtcgtt ttcacacttc 6720 aaacataaag acaaaaacat caaaaatata tactgtgttt tacatatgtg tctattttca 6780 cacatatatg tatgtatgtt tatatgtatg gaaactacag aagcacatgt cgccaataag 6840 agctctgaga cacctttgac cacttaccct tatcagatgc gatttgccaa atgagttgtg 6900 gaaacaagtt ttttaaactg aatttctgag ctttgtgaat ttagaaatgc aaaggaaagt 6960 ttgtggacat ttacagggat catggtttta ttgtccttta aactcttcga tactttacca 7020 ttgtcttact ataaatccaa aatcctaacg ccacccacga ggctttcaat acctggcttc 7080 ttgtgatttc tccaggctaa ccttttaccc tccttcccct cagcctctct gctttagtga 7140 actttctcct agttttttga agaagttcat caattcaagc ttttgtacat gggatttcct 7200 aaacctgaaa tgtgcctccc gttttgtcca aacagacacg ggctccactc tgccccctgg 7260 ctcacacctg cttaacctgt caagtcacat ctgaactgtc actcttcaga gggtccttct 7320 ctggcaccct aatgtaattg agatcatcct attattctct gctctagaac ttcccacttc 7380 cgggatttct cattcctgtc taacctcttg tgtgtctggt ttttggccat cgctttcact 7440 gctctttaag ctcccccagc ggagtggaga ggtctgtttt cccttgtttg gattcctaga 7500 ggcagcgcag gcctggcaca aggtcatcac taagaaagtg ttcacaggat gaacgcggtg 7560 ggtgctgttt aaggaaccgg taaacatgtg ggatgagaga aggagcagag tgtctttggg 7620 gtggaggctc ctaggaggag gcggggcggg ctgcggtgcg gggcggatcc tcctccagct 7680 cctgcttgga ggtctccaga acaagctgga ggcagggagg gggtcccaaa agcctgggga 7740 tgagaagggg ttttcccgca tagtccccta ggcccccgtt cgcctgagga aaacggagga 7800 tgagctcctg ggctgcaggt ggtgggcgtt gcgggtgggg ccggttaagg ttcccagtgc 7860 ccgcacccca cccagggagc cccggatggc ggcgtcgctg tcagtgtctt ctcaggaggc 7920 cgcccgtgtg accggatcct tcgtgtaccc gcagcacgtt tcttggagct gcgtaagtct 7980 gagtgtcatt tcttcaatgg gacggagcgg gtgcggtacc tggacagata cttccataac 8040 caggaggagt tcctgcgctt cgacagcgac gtgggggagt accgggcggt gacggagctg 8100 gggcggcctg tcgccgagtc ctggaacagc cagaaggacc tcctggagca gaagcggggc 8160 cgggtggaca attactgcag acacaactac ggggttggtg agagcttcac agtgcagcgg 8220 cgaggtgagc atgtcggggg gcggggcctg ggtccctgtg agctggaaat ctgagagaga 8280 gtgtgtgtgt gtgtgtgtgt gtgtgtgtga gagagagaga gagagaggaa gagacagaga 8340 gagggagcgc gccatctgtg agcatttaga atcctctcaa tcccgagcaa gcagttatga 8400 aggcacaggt gtgtgtgtag agtgtggatt ggtctgtgtc tgtgtgcctg ttgtgggagg 8460 ggaagcagga gggggctgct tcttatcctt ggagacttct gtggagaggt gacaagggag 8520 gtgggtgcgg gcggctggag agagaggaga ccttgattgt cctgggtcct tagagatgca 8580 gggaaggaaa gtgtaaggtg tgtgtgggtg gggtgaaggt ttaggggagg agagctgagg 8640 ggtaaggaag gtttgggata atgtgaggag gccggttcca gactgtccct ggcacacacc 8700 cttcatgtaa tctctgaaat aaaagtgcgt gctgtttgta aaagcattag attaagttct 8760 aggggaattg agtagacctc taaggcacct ctgaaacttc tttaggtata aatttcttgc 8820 tagttttttg tttttctagt gtgtatattt ttacatagta gaaatgacag tgaaactaac 8880 ttttgaatta aagttttaac acagttactg tattattata atgctaatag ttttctagta 8940 gttacatatt attcttttat atataatagt tgtgacacaa cttagggatc actttcccct 9000 ttgttgacct ttattatgac attcaccaaa agttgaaaat gtatgtttct ggttaatttt 9060 taatttatat tttttcattt gaaaaaatgt ggagaggtct gtttttcatt caaaagagtt 9120 cttttgaatt attttgaccg atttattggt caattttaat aactgctcta agaattccct 9180 attttatttg gtaggtaatg gacaatgatc tactgcctaa tatctctagg gcttagtatt 9240 tttctcagtg actttgtggg ttctttgtac tgtaagatta ttaacacttt attgatattt 9300 gattcagcat ttgctccagt ttgtggtttg tatgttgatt ttgaaaattc ttttccatgt 9360 taagaatttg aacattttta tttaataaaa tgtattgcaa aaattttatt aatgatttac 9420 aatccatctt aaatctgcca ttttgtggta tttttgtctc taggtttctc cttacttcta 9480 aaaacattgt atttattgag agtatgctaa tgtcggggat tttcctgggc ataagcacca 9540 caagtaatga gttccagacc ctgccttaat ccaaatgtga ttctggaaag aaaaatcatt 9600 ttacaattgg cctgataata attctgcttg tgttgcacgg gggatacatt gagcagctga 9660 atgaaaatat aagaactttc aaaactaaaa tgacgctcct aaatccttct gtctgcttta 9720 ggactcatgc ttttctagga acgtaaaaat ttggagaatc atttctgtct gtcccacctt 9780 cccaggggca gaaccatttc tgtggtgttc taaggtgtga gtgcatggca gtagtattcc 9840 taaaaattca tactcggttt tctcatgtac ccaactctgt ccctttgtct atgtacattg 9900 ctttaaatca tatttttctg tcacggtgta caaggatgat aaataggtgc caagtggagc 9960 acccaagtgt gatgagcccc cttacggtgg aatggagtga gaagctttct gatctcataa 10020 attgaaggct atcttcagtc attatgtatt ttacataaat taatcctcat ataaccccaa 10080 gaggtaaatt agtataatta tccttcattg ggggtgacaa agttgagaca cagaagaatc 10140 aactcttcca ggatcaacca gtaaaaggca gaccttggat ttgaaccatg caacctggct 10200 caggtatcag ttttaattac tacactctgt actttcaaaa atttgtaaac actttgacaa 10260 tgcatgccaa tttcaagtta tgaagaagca aacgcaattt ttcacatctc tcaaatctaa 10320 tgggtcctca ctatcaagat taaattccag gctgatgaca ctgtaaggcc acatggccag 10380 ctgtgctgga ggcctggtca aggtcagagc ctgggtttgc agagaagcag acaaacagcc 10440 aaaccagcag aattactctg tcttcctgac tcattccctc tacctttttt tctcctagtc 10500 catcctcagg tgactgtgta tcctgcaaag acccagcccc tgcagcacca caacctcctg 10560 gtctgctctg tgagtggttt ctatccaggc agcattgaag tcaggtggtt ccggaacggc 10620 caggaagaga aggctggggt ggtgtccacg ggcctgatcc agaatggaga ctggaccttc 10680 cagaccctgg tgatgctaga aacagttcct cggagtggag aggtttacac ttgccaagtg 10740 gagcacccaa gcgtaacgag cgctctcaca gtggaatgga gtgagcagct ttctgatttc 10800 atacatttct cacccaccaa gaaggggact gtgctaatcc ctgagtgtca ggtttctcct 10860 ctcccacgtc ctattttcat ttgctccatg ttctcatctc catcagcaca ggtcactggg 10920 gatagccctg taacagtgtg tagaaacacc tgtactccct gtggaatcag tcatgctttt 10980 tttttttttg aacctcccca tgatgtcaca ggtcagggtc acccgatctc cccaagctcc 11040 aggccctgct tctgggtctg agactgagtt tctggtgctg ctgctctgag ttacttgttt 11100 tgatctggga agaggggaag cataggggcc tacctgacat gaggggagtc caatctcagc 11160 tctgcctttt attagctctg tcactctaga caaactactt agcctcactg agtctcaggc 11220 tttctgtgga tcagatgttg aacgcttgcc ttacatcaag gctgtaatat ttgaatgagt 11280 ttgatgtcgg aaccttgtaa ctgttcagtg tgatttgaaa tccttttttt ctcccaaaat 11340 ggctagttat tttagttctt gtggggcagc cttcttcccc attttcaaag ctctgaatct 11400 tagagtctca attaaagagg ttcaatttgg aataagcatc actaaacctg gcttcctctc 11460 tcaggagcac ggtctgaatc tgcacagagc aagatgctga gtggagtcgg gggctttgtg 11520 ctgggcctgc tcttccttgg ggccgggctg ttcatctact tcaggaatca gaaaggtgag 11580 gagcctttgg tagctgggcc tttccatagg cttttctgca ggaggaaata gagctttgct 11640 gaggttagtt ctcagtatat gagtggctct gaataaagcc tttctttccc caaacggctc 11700 taatgtcctg ctaatccaga aatcatcagt gcatggttac tatgtgaaag cataatagct 11760 tgtggcctgc agagacaaga ggaaggttaa caagtagggg tcctttggtt tgagatcttg 11820 gagcaaatta aggaagagcc actaaagtta atggaattac actggatcct gtgacagaca 11880 cttcatgctt catgggtcac atggtctgtt tctgctcctc tctgccctgg ttggtgtggg 11940 ttttggtgtt agaactctcc ggtgggagat ctgggactgt gatattgtgt tggaggacag 12000 atttgcttca atatctttta agtgtatatc ttttcctctt tttcccagga cactctggac 12060 ttcagccaac aggtaatacc ttttaatcct cttttagaca cagattcagt ttctccagtg 12120 agaggtgaag ccagctggac ttctgggttg ggtggggact tggagaactt ttctgtctta 12180 caagaggttt ctaaatgcac caatgagtgc tctgtaaaaa cacaccaatg agtgctctgt 12240 aaaaattgac actctgtggc tcgctagatg tttgtaagat ggaccaatca gcactctgta 12300 aaatggacca atccacactc tgtaaaatgg accaatcagc actctttaaa atggaccaat 12360 cagcaggata cgggcgggga caaataaggg aataaaagct ggtcacccta gccagcacct 12420 gcaacctgct taggtccttt tctatgctgt ggaagttttg ttcttttgat cttcacaata 12480 aatcttgtgc tcactctttg ggtccgtgcc acctttaaga gctataacac tcactgcaag 12540 ggtctgtggc ttcactcttg aagtcagcca gaccctgaac ctaccggaag gaacaaactc 12600 aggacacact agaatgatgg tagaggtgat aaggcatgag acagaaataa taggaaagac 12660 tttggatcca aatttctgat caggcaattt acaccaaaac tcctcctctc cacttagaaa 12720 aggcctgtgc tctgcaggac tattggctct gggagactca ggaacttgtt tttcttcttc 12780 ctgcagtgtt ctcatctgag tccttcaaag agggggaaag aaacgttagt agagccaggt 12840 tgaaaacaac actctcctct gtcttttgca 12870 // ID KX687288; SV 1; linear; genomic DNA; STD; HUM; 12872 BP. XX AC KX687288; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH23 MHC class II antigen (HLA-DRB3) gene, DE HLA-DRB3*01_01_02_01v5 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-12872 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-12872 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 38af09f49215fdc43faa706a44c0385c. XX FH Key Location/Qualifiers FH FT source 1..12872 FT /organism="Homo sapiens" FT /isolate="IH23" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <174..>12074 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*01_01_02_01v5" FT mRNA join(<174..273,7957..8226,10501..10782,11467..11577, FT 12051..>12074) FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*01_01_02_01v5" FT /product="MHC class II antigen" FT CDS join(174..273,7957..8226,10501..10782,11467..11577, FT 12051..>12074) FT /codon_start=1 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*01_01_02_01v5" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1A5" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1A5" FT /protein_id="AST15801.1" FT /translation="MVCLKLPGGSSLAALTVTLMVLSSRLAFAGDTRPRFLELRKSECH FT FFNGTERVRYLDRYFHNQEEFLRFDSDVGEYRAVTELGRPVAESWNSQKDLLEQKRGRV FT DNYCRHNYGVGESFTVQRRVHPQVTVYPAKTQPLQHHNLLVCSVSGFYPGSIEVRWFRN FT GQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSALTVEWRARSE FT SAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPT" XX SQ Sequence 12872 BP; 3464 A; 2541 C; 2976 G; 3891 T; 0 other; gctgttgaac tcagatgctg attggttctc cgacacgaga ttacccaatc caggagcaag 60 gaaatcagta acttcctccc tataatttgg aatgtgggtg gaggggggtc atagttctcc 120 ctgagtgaga cttgcctgct cctctggccc ctggtcctgt cctcttctcc agcatggtgt 180 gtctgaagct ccctggaggc tccagcttgg cagcgttgac agtgacactg atggtgctga 240 gctcccgact ggctttcgct ggggacaccc gacgtaagag cacattgagg gtgctgagct 300 actatggggt gggggaatat agggagttgt gttaacattg tgcccaggcc atgtccctta 360 agaaattgtg aggttttctt cagagattgc tcatctttat caagggatcg caaattattt 420 cctccacaaa aggaacttgg ctacttgccc tctccatgag acttgtgtaa ggggcctttg 480 tacaggccat ttcttctcaa atctccacca ataaaacctt tgcatcacat gtactcaggg 540 tctttagagg atttggaaat aaggatgcta aaataaattc cccatacagc aattcccttt 600 attatgttga cttatgtcag acaaaaggag gtttttactg aaaattttgt gggagtcaag 660 ggaattcaaa gggtctctcc tagacgatcc tgggttatgt cctccacagg acttgtggtg 720 ttggcccctc ttcctcatat gtgaggatgg acccagtggc ctccctagta tctcctttct 780 tttctttctg aactccaatg tttataaagc ctgtatccct gtagtgtatg taggttgtct 840 gacagaagtt atacttagtg ctctttcttt cttttgggga aaaatccctg gaactgaagc 900 tgagatcatt agtacttgga atcaccttac agatacagag cacttatgag gtattctttg 960 gtgcctaaag aacttaaggc atcctctgaa aaactggccc aggttagtgt ttattatgaa 1020 tctttttaac ctttctatac ttgtttctcc tacatctcct acatgctcta actagacatg 1080 acagaagaga tttaactaat gtagtataaa ttatatgaaa ttctattttt gtaagtcaaa 1140 aataatcaaa tatcagaaat ttaataatgt tcaaactata tactgtgtgg ggttaccgag 1200 acaatgtgga cattgttcac atctcatagg gctgaaagtc aatgggcaag tcctggaaac 1260 tcattgtctt actgcggtct tgtcctcagt ttcataggtt cacccatcat gccctcagct 1320 ttccttaatt agccatgtct gcttacctct tcctcccatt tctctctatt tttccccaac 1380 tatgttgtca tcatttccag aaatctctaa agcttgcaca gatccttagc actatgagat 1440 ccattgaaag agataatatt tttctctttg agatagggcc tggctctgtc acccaggctg 1500 tagctcagtg gtgcgatcga ggctcactgc aacctctgcc tcccacactc aagcaatcct 1560 ccctcctcag gctccagagt agctgggaat acaggcaggc aaccacgccc agctaatttt 1620 tgcaattttg gtagagagga gattttgcca tattgcccag gctggtctta aactgctgaa 1680 ctcaagcaat cctcctgcct tagcctccca acatgctagg attatagatg tgagccagtg 1740 tgcccaggca aaagagatga ctcttaataa aaagatttcc tttttcttaa atcactgttc 1800 ctttatccgt gaattcttct tccaactaga agaaggagaa agaagtttgc ctgtatttct 1860 caccaggagg agaaggggtc tagtgtgaca tcaaaatgaa agagtgctgg aacttgagcc 1920 ccttcttgct ttccaggatc cccacagtga tcagttccca taccctggtt tatttgtgta 1980 aaccacactt atttttctca gcagctactg tgtactgggt tccattctag gttcaaatca 2040 ttctatttga ttaagataga gagggtcccg actctcaagg aagttacaag agtggaggag 2100 acagacacta acccaataag catttaacaa agaagataat gttagagagt catagtgcac 2160 tgaagaaaag acatcagatg tgtgttgaaa gagagaaatg gattcatcta ctttagtttg 2220 tatgtttagg gagctctacc tgagaaagtg atattcagct gagacaacaa aataagtaga 2280 cagtcatgaa gatctaacgg acgaaagttt cagggagacc gaatcgaggg aaagcactgg 2340 tgtgggaaat tatgtggagg gagagaaaga aggctagaaa ggctgacgta tagaaagcaa 2400 ggaaatggag aggcagaaga tgaggtagga cacagagagg aagtcaggag cctcatcatt 2460 ataggctctg atgtccacgg taaaaaattt gaattttatt ttatttttat ttatttttaa 2520 attttattta tttatttatt ttgagatgga gtttcattct tgttgcccag gctggagtgc 2580 catggcgcaa tctccactca ctgcaacctc cacctcctgg gttcaagtga ttttcctgcc 2640 tcagcttccc aagtaactgg gattacaggc acccaccacc atacctggct aatttttttg 2700 tatttttagt atacatgggg tatcaccatg ttgaccaggc tggtcttgaa ctcctgacct 2760 cagataatct gtctgccttg gcctcccaaa gtgctgggat tacaggcgtg agccaccacc 2820 cccggactga attttattta aatagatatg agaagctgct gtatggttac aaggagagtc 2880 aatttatatt caacttttgt gtgtgtgtgt gatggagtct cactctgttg cccaggctag 2940 attgcagtgg cacaatctcg gctcactgca acctccgcct cccgggttca agaaattatc 3000 cttcctcagc ctcctgagta gctgggacca caggtgcatg ccaccacagt cggctacttt 3060 ttgtattttt agtagggatg gggtttcacc gtgttagcca agatggtctc gatctcctga 3120 ccttgtgatc caccagcctc ggcctcccaa agtgctggga ttacaggcat gagccactgc 3180 gcccagctta tattcaatta ttacaattaa ttctagctac tttgtgggga ttggattgtt 3240 ggggttcaca agtggttagg aggactattt aggagcacag cagggaattc tccagggaaa 3300 acaggcttgt ggcttcatgg agtgcattag tgataaagac ggtgaaaaag ataaagtgga 3360 cagacttggc atgtattttt gcttagcttg ttaatgaatt actgtaaagg gggtggaaca 3420 atcaagttta ttcctgagga ttttgttttg acaaataagt gggtggtagt tttgtttatt 3480 gagataggaa aaactgtggg aggaaatgat ttgaagtggg tggttggaaa taaaagtttt 3540 gtttaaatta gagatgattt attgacattt atgtagagca atcagaaggt cagtggcatt 3600 taagagactc atggtgaggt gaggctaggg cttcagatat ttatgttggc ggcatcaata 3660 cgtgtagtgt gttaaattct agggagtgga agaggataca tagggagatg gattgtgtgg 3720 agaaaaaaga acagggcaca ggccagcaaa gtgggctgag acagagccca gggatgttgg 3780 agaaaaacca agagaacata atgcgtgtaa gtcaaggaaa atatattttt ttcagggaga 3840 agggagaggc caattgtggt gagtaccact aagcagaggg ggaagtgaga acgtgacaga 3900 gaagcaagtg ctgggtttgg tggagttgat atttgtagtc aatggagtat ccagggagga 3960 aactggattg gactatttga agagtgagta gaagtgagga cgaggttaag gttgactgtt 4020 ttgagtagaa cttcgggaag gactgtgctc tgggttcagg gagcccgctg aatctaaagg 4080 aaaaggctaa agaagctaaa gagacggagg aagacctgtg aacaagagat gctcagtcat 4140 tagcaaggaa atactggaga gcccctgtgt gcagtggtga ctactcatgc aaaaggtcac 4200 acagccaata tttaacacag ccagtatttc acagagccaa tatttattag tgacatagaa 4260 tataccagtt attactctag gtcatgagag tggtgataaa taaaatgaat ccgctcgcca 4320 tcagtatatg ccatgtaaca gtttgcagtg actgtgtacc aggcctgtga atttctgtat 4380 gcaatttcaa taatgatcct gctgtatctg tggtatttaa aaacatatac atctctggaa 4440 tctaaaattg agaggttata agtaaaaccc agtattagaa atttagtgct ggaaatcaga 4500 ttgcagttta aatctgagca tatagaaagt ccctttcttc tatgtcagca gatgcctttt 4560 atgtgaggtt taggtatact acattattag acataaacca gtgtttctgc cctatgtttt 4620 cagaatgaca attctttatg aaactcatag aagaacagaa gacaattgca aaatcatgaa 4680 gatactaatt gctttagaat taaggaatac aaaaaataat gtgagctaca gttataggga 4740 tcataaaagt taaaatggga atgtatttga gtgtttatta tgtgatcagt gctaagaaga 4800 gtcatcattt aattttacac ttaacagtaa tcctgtgagg attatgctat tattaaatgc 4860 atttgatata ttacaaaaag gcttacggtt ggtaaaaatt gacccaagta gaagaggtca 4920 cctttttatt cagattttct gattgtaggg tttgagagtt tttccatcat tagtgagtag 4980 tgactatatt gtgtctgaat tattgacaga atttctgata ttcatatata ccaggttgtt 5040 tctttgagtg gggacagaga tgcaagggct gctaattcca atgtatagga gaaactttca 5100 atgattttgc atttatcatt ttaaaagttc agtatgtcta taatggtcat gcgttgacaa 5160 acacaaggaa gtattaaatc actccttctt ctgaggtttg actagcaaat tgggcaagag 5220 ttaccaaata aaacacatgt tcctagttaa atctaaattt cagatacacg accataattt 5280 attggaaatc caaatttaat tgggtaccct ctggttttat ttgccaaatc tgtcaaccct 5340 aagtgggaca catggacatg gattacagtg ctacccatgc aagccacagt gacagcaact 5400 ttacacatgt ttacatttta actttctctc tgtaagaaag tgcttagata atctagggat 5460 aaaaagatag acattgtttg atccagggtg gacacctctc tgccatcgtt tctaaagggc 5520 aaagggagat ttctgcaggt cttgctcaca gtctggggac ctgctcatgt tttgaaactg 5580 tctgtatcag aatgtcattt tcttggtttc tccctttctg aggggacttg actacaaaac 5640 caagagttct gcctctggcc aaggctggaa atgtgatgcc tgctagcatt gttgggagtg 5700 ggagactgag agaaatgagt tagttggggc atttaatggg aataaaatag ctgtggttgt 5760 gattcattac tatagataat tagtggacca gtggcagaga aattaagaaa aaagatgatg 5820 tgaatgataa atgatatgat tagtgactgc ttggtaaggc aagtaaatca ttaaatcttg 5880 gttctcatca agttcatttt ctgaaaagat agcactgtat tgggaccaga attctacaaa 5940 acattctttt tacctaggac caagattttc aagaaatatt tttcaataca attctcagct 6000 gctccataac taatagtagc ttgttcaaca cagatttttt cagatggttc acacctgtag 6060 ttcttaccca gggatagttc accacccctc ccttccctcc catcatcctt ggggaacagt 6120 gacaatgttt ggaacaattt ttggttgtca caacaggggt ttcttctgat atttaatgag 6180 tagaagccag gaacactgct agagaaccta caatgttcag aacagcctcc gccatcaaca 6240 aagaattatc tggtccaaaa tgtcaatagt gctgaggctg agagcactgg ttcacgctgt 6300 gctctttttg aaaattctac actcacatct gttatacact caccacacag ttcagttttt 6360 tatagtttat ttttgcttgt tccattataa aaaaattaga cagttgcata aattcaacca 6420 ctttcttgtt gaatccactt agtcaatgca agcttaatat tttcatattt agtttttgcc 6480 ttatgcaata tttttcaaca ttttcatgag ttgttggtca tcaccatctc tattaacttc 6540 caacaacttg ctcttgtaag tcacaaatag tgatgctgct gaaattattt ctcagtaaca 6600 tgcctcagat ttctgtagtg attctacatt ttatattatt cacaatgtaa aatgcttcta 6660 tgtactcatt tcacttttac ccaaggatta tttttaagtt atttttgtcg ttttcacact 6720 tcaaacataa agacaaaaac atcaaaaata tatattgtgt tttacatatg tgtctatttt 6780 cacacatata tgtatgtatg tttatatgta tggaaactac agaagcacat gtcgccaata 6840 agagctctga gacacctttg accacttacc cttatcagat gagatttgcc aaatgagttg 6900 tggaaacaag ttttttaaac tgaatttctg agctttgtga atttagaaat gcaaaggaaa 6960 gtttgtggac atttacaggg atcatggttt tattgtcctt taaactcttc gatactttac 7020 cattgtctta ctataaatcc aaaatcctaa cgccacccac gaggctttca atacctggct 7080 tcttgtgatt tctccaggct aaccttttac cctccttccc ctcagcctct ctgctttagt 7140 gaactttctc ctagtttttt gaagaagttc atcaattcaa gcttttgtac atgggatttc 7200 ctaaacctga aatgtgcctc ccgttttgtc caaacagaca caggctccac tctgccccct 7260 ggctcacacc tgcttaacct gtcaagtcac atctgaactg tcactcttca gagggtcctt 7320 ctctggcacc ctaatgtaat tgagatcatc ctattattct ctgctctaga acttcccact 7380 tccgagattt ctcattcctg tctaacctct tgtgtgtctg gtttttggcc atcgctttca 7440 ctgctcttta agctccccca gcggagtgga gaggtctgtt ttcccttgtt tggattccta 7500 gaggcagcgc aggcctggca caaggtcatc actaagaaag tgttcacagg atgaacgcgg 7560 tgggtgctgt ttaaggaacc ggtaaacatg tgggatgaga gaaggagcag agtgtctttg 7620 gggtggaggc tcctaggagg aggcggggcg ggctgcggtg cggggcggat cctcctccag 7680 ctcctgcttg gaggtctcca gaacaagctg gaggcaggga gggggtccca aaagcctggg 7740 gatgagaagg ggttttcccg catagtcccc taggcccccg ttcgcctgag gaaaacggag 7800 gatgagctcc tgggctgcag gtggtgggcg ttgcgggtgg ggccggttaa ggttcccagt 7860 gcccgcaccc cacccaggga gccccggatg gcggcgtcgc tgtcagtgtc ttctcaggag 7920 gccgcccgtg tgaccggatc cttcgtgtac ccgcagcacg tttcttggag ctgcgtaagt 7980 ctgagtgtca tttcttcaat gggacggagc gggtgcggta cctggacaga tacttccata 8040 accaggagga gttcctgcgc ttcgacagcg acgtggggga gtaccgggcg gtgacggagc 8100 tggggcggcc tgtcgccgag tcctggaaca gccagaagga cctcctggag cagaagcggg 8160 gccgggtgga caattactgc agacacaact acggggttgg tgagagcttc acagtgcagc 8220 ggcgaggtga gcatgtcggg gggcggggcc tgggtccctg tgagctggaa atctgagaga 8280 gagtgtgtgt gtgtgtgtgt gtgtgtgtga gagagagaga gagagagagg aagagacaga 8340 gagagggagc gcgccatctg tgagcattta gaatcctctc aatcccgagc aagcagttat 8400 gaaggcacag gtgtgtgtgt agagtgtgga ttggtctgtg tctgtgtgcc tgttgtggga 8460 ggggaagcag gagggggctg cttcttatcc ttggagactt ctgtggagag gtgacaaggg 8520 aggtgggtgc gggcggctgg agagagagga gaccttgatt gtcctgggtc cttagagatg 8580 cagggaagga aagtgtaagg tgtgtgtggg tggggtgaag gtttagggga ggagagctga 8640 ggggtaagga aggtttggga taatgtgagg aggccggttc cagactgtcc ctggcacaca 8700 cccttcatgt aatctctgaa ataaaagtgc gtgctgtttg taaaagcatt agattaagtt 8760 ctaggggaat tgagtagacc tctaaggcac ctctgaaact tctttaggta taaatttctt 8820 gctagttttt tgtttttcta gtgtgtatat ttttacatag tagaaatgac agtgaaacta 8880 acttttgaat taaagtttta acacagttac tgtattatta taatgctaat agttttctag 8940 tagttacata ttattctttt atatataata gttgtgacac aacttaggga tcactttccc 9000 ctttgttgac ctttattatg acattcacca aaagttgaaa atgtatgttt ctggttaatt 9060 tttaatttat attttttcat ttgaaaaaat gtggagaggt ctgtttttca ttcaaaagag 9120 ttcttttgaa ttattttgac cgatttattg gtcaatttta ataactgctc taagaattcc 9180 ctattttatt tggtaggtaa tggacaatga tctactgcct aatatctcta gggcttagta 9240 tttttctcag tgactttgtg ggttctttgt actgtaagat tattaacact ttattgatat 9300 ttgattcagc atttgctcca gtttgtggtt tgtatgttga ttttgaaaat tcttttccat 9360 gttaagaatt tgaacatttt tatttaataa aatgtattgc aaaaatttta ttaatgattt 9420 acaatccatc ttaaatctgc cattttgtgg tatttttgtc tctaggtttc tccttacttc 9480 taaaaacatt gtatttattg agagtatgct aatgtcgggg attttcctgg gcataagcac 9540 caccagtaat gagttccaga ccctgcctta atccaaatgt gattctggaa agaaaaatca 9600 ttttacaatt ggcctgataa taattctgct tgtgttgcac gggggataca ttgagcagct 9660 gaatgaaaat ataagaactt tcaaaactaa aatgacgctc ctaaatcctt ctgtctgctt 9720 taggactcat gcttttctag gaacgtaaaa atttggagaa tcatttctgt ctgtcccacc 9780 ttcccagggg cagaaccatt tctgtggtgt tctaaggtgt gagtgcatgg cagtagtatt 9840 cctaaaaatt catactcggt tttctcatgt acccaactct gtccctttgt ctatgtacat 9900 tgctttaaat catatttttc tgtcacggtg tacaaggatg ataaataggt gccaagtgga 9960 gcacccaagt gtgatgagcc cccttacggt ggaatggagt gagaagcttt ctgatctcat 10020 aaattgaagg ctatcttcag tcattatgta ttttacataa attaatcctc atataacccc 10080 aagaggtaaa ttagtataat tatccttcat tgggggtgac aaagttgaga cacagaagaa 10140 tcaactcttc caggatcaac cagtaaaagg cagaccttgg atttgaacca tgcaacctgg 10200 ctcaggtatc agttttaatt actacactct gtactttcaa aaatttgtaa acactttgac 10260 aatgcatgcc aatttcaagt tatgaagaag caaacgcaat ttttcacatc tctcaaatct 10320 aatgggtcct cactatcaag attaaattcc aggctgatga cactgtaagg ccacatggcc 10380 agctgtgctg gaggcctggt caaggtcaga gcctgggttt gcagagaagc agacaaacag 10440 ccaaaccagc agaattactc tgtcttcctg actcattccc tctacctttt tttctcctag 10500 tccatcctca ggtgactgtg tatcctgcaa agacccagcc cctgcagcac cacaacctcc 10560 tggtctgctc tgtgagtggt ttctatccag gcagcattga agtcaggtgg ttccggaacg 10620 gccaggaaga gaaggctggg gtggtgtcca cgggcctgat ccagaatgga gactggacct 10680 tccagaccct ggtgatgcta gaaacagttc ctcggagtgg agaggtttac acttgccaag 10740 tggagcaccc aagcgtaacg agcgctctca cagtggaatg gagtgagcag ctttctgatt 10800 tcatacattt ctcacccacc aagaagggga ctgtgctaat ccctgagtgt caggtttctc 10860 ctctcccacg tcctattttc atttgctcca tgttctcatc tccatcagca caggtcactg 10920 gggatagccc tgtaacagtg tgtagaaaca cctgtactcc ctgtggaatc agtcatgctt 10980 tttttttttt tgaacctccc catgatgtca caggtcaggg tcacccgatc tccccaagct 11040 ccaggccctg cttctgggtc tgagactgag tttctggtgc tgctgctctg agttacttgt 11100 tttgatctgg gaagagggga agcatagggg cctacctgac atgaggggag tccaatctca 11160 gctctgcctt ttattagctc tgtcactcta gacaaactac ttagcctcac tgagtctcag 11220 gctttctgtg gatcagatgt tgaacgcttg ccttacatca aggctgtaat atttgaatga 11280 gtttgatgtc ggaaccttgt aactgttcag tgtgatttga aatccttttt ttctcccaaa 11340 atggctagtt attttagttc ttgtggggca gccttcttcc ccattttcaa agctctgaat 11400 cttagagtct caattaaaga ggttcaattt ggaataagca tcactaaacc tggcttcctc 11460 tctcaggagc acggtctgaa tctgcacaga gcaagatgct gagtggagtc gggggctttg 11520 tgctgggcct gctcttcctt ggggccgggc tgttcatcta cttcaggaat cagaaaggtg 11580 aggagccttt ggtagctggg cctttccata ggcttttctg caggaggaaa tagagctttg 11640 ctgaggttag ttctcagtat atgagtggct ctgaataaag cctttctttc cccaaacggc 11700 tctaatgtcc tgctaatcca gaaatcatca gtgcatggtt actatgtgaa agcataatag 11760 cttgtggcct gcagagacaa gaggaaggtt aacaagtagg ggtcctttgg tttgagatct 11820 tggagcaaat taaggaagag ccactaaagt taatggaatt acactggatc ctgtgacaga 11880 cacttcatgc ttcatgggtc acatggtctg tttctgctcc tctctgccct ggttggtgtg 11940 ggttttggtg ttagaactct ccggtgggag atctgggact gtgatattgt gttggaggac 12000 agatttgctt caatatcttt taagtgtata tcttttcctc tttttcccag gacactctgg 12060 acttcagcca acaggtaata ccttttaatc ctcttttaga cacagattca gtttctccag 12120 tgagaggtga agccagctgg acttctgggt tgggtgggga cttggagaac ttttctgtct 12180 tacaagaggt ttctaaatgc accaatgagt gctctgtaaa aacacaccaa tgagtgctct 12240 gtaaaaattg acactctgtg gctcgctaga tgtttgtaag atggaccaat cagcactctg 12300 taaaatggac caatccacac tctgtaaaat ggaccaatca gcactcttta aaatggacca 12360 atcagcagga tacgggcggg gacaaataag ggaataaaag ctggtcaccc tagccagcac 12420 ctgcaacctg cttaggtcct tttctatgct gtggaagttt tgttcttttg atcttcacaa 12480 taaatcttgt gctcactctt tgggtccgtg ccacctttaa gagctataac actcactgca 12540 agggtctgtg gcttcactct tgaagtcagc cagaccctga acctaccgga aggaacaaac 12600 tcaggacaca ctagaatgat ggtagaggtg ataaggcatg agacagaaat aataggaaag 12660 actttggatc caaatttctg atcaggcaat ttacaccaaa actcctcctc tccacttaga 12720 aaaggcctgt gctctgcagg actattggct ctgggagact caggaacttg tttttcttct 12780 tcctgcagtg ttctcatctg agtccttcaa agagggggaa agaaacgtta gtagagccag 12840 gttgaaaaca acactctcct ctgtcttttg ca 12872 // ID KX687289; SV 1; linear; genomic DNA; STD; HUM; 12867 BP. XX AC KX687289; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH18 MHC class II antigen (HLA-DRB3) gene, DE HLA-DRB3*02_02_01_02v1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-12867 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-12867 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 84c0c3697f94b6bd77502e28ed3e432a. XX FH Key Location/Qualifiers FH FT source 1..12867 FT /organism="Homo sapiens" FT /isolate="IH18" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <174..>12069 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*02_02_01_02v1" FT mRNA join(<174..273,7926..8195,10496..10777,11462..11572, FT 12046..>12069) FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*02_02_01_02v1" FT /product="MHC class II antigen" FT CDS join(174..273,7926..8195,10496..10777,11462..11572, FT 12046..>12069) FT /codon_start=1 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*02_02_01_02v1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1B5" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1B5" FT /protein_id="AST15802.1" FT /translation="MVCLKLPGGSSLAALTVTLMVLSSRLAFAGDTRPRFLELLKSECH FT FFNGTERVRFLERHFHNQEEYARFDSDVGEYRAVRELGRPDAEYWNSQKDLLEQKRGQV FT DNYCRHNYGVGESFTVQRRVHPQVTVYPAKTQPLQHHNLLVCSVSGFYPGSIEVRWFRN FT GQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWSARSE FT SAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPT" XX SQ Sequence 12867 BP; 3469 A; 2544 C; 2978 G; 3876 T; 0 other; gctgttgaac tcagatgctg attggttctc cgacacgaga ttacccaatc caggagcaag 60 gaaatcagta acttcctccc tataatttgg aatgtgggtg gaggggggtc atagttctcc 120 ctgagtgaga cttgcctgct cctctggccc ctggtcctgt cctcttctcc agcatggtgt 180 gtctgaagct ccctggaggc tccagcttgg cagcgttgac agtgacactg atggtgctga 240 gctcccgact ggctttcgct ggggacaccc gacgtaagag cacattgtgg gtgctgagct 300 actatggggt gggggaatat agggagttgt gttaacattg tgcccaggcc atgtccctta 360 agaaattgtg aggttttctt cagagattgc tcatctttat caagggatcg caaattattt 420 cctccacaaa aggaacttgg ctacttgccc tctccatgag acttgtgtaa ggggcctttg 480 tacaggccat ttcttctcaa atctccacca ataaaacctt tgcatcacat gtcctcaggg 540 tctttagagg atttggaaat aaggatgcta aaataaattc cccaaacagc aattcccttt 600 attatgttga cttatgtcag acaaaaggag gtttttactg aaaattttgt gggagtcaag 660 ggaattcaat gggtctctcc tagacgatcc tgggttatgt cctccacagg acctgtggtg 720 ttggcccctc ttcctcatat gtgaggatgg acccagtggc ctccctagta tctcctttct 780 tttctttctg aactccaatg tttataaagc ctgtatccct gtagtgtatg taggttgtct 840 gacagaagtt atacttagtg ctctttcttt cttatgggga aaaatccctg gaactgaagc 900 tgagatcatt agtacttgga atcaccttac agatacagag catttatgag gtattctttg 960 gtgcctaaag aacttaaggc atcctctgaa aaactggccc aggttagtgt ttattatgaa 1020 tctttttaac ctttctatac ttgtttctcc tacatctcct acatgctcta actagacatg 1080 acagaagaga tttaactaat gtagtataaa ttatatgaaa ttctattttt gtaagtcaaa 1140 aataatcaaa tatcagaaat ttaataatgt tcaaactata tactgtgtgg ggttaccgag 1200 acaatgtgga cattgttcac atctcatagg gctgaaagtc aatgggcaag tcctggaaac 1260 tcattgtctt actgcggtct tgtcctcagt ttcataggtt cacccatcat gccctcagct 1320 ttccttaatt agccatgtct gcttacctct tcctcccatt tctctctatt tttccccaac 1380 tatgttgtca tcatttccag aaatctctaa agcttgcaca gatccttagc actatgagat 1440 ccattgaaag agataatatt tttctctttg agatagggcc tgcctctgtc acccaggctg 1500 tagctcagtg gtgtgatcga ggctcactgc aacctctgcc tcccatgctc aagcaatcct 1560 ccctcctcag gctccagagt agctgagaat acaggcaggc aaccacgccc agctaatttt 1620 tgcaattttg gtagagagga gattttgcca tattgcccag gctggtctta aactgctgaa 1680 ctcaagcaat cctcctgcct tagcctccca acatgctagg attatagatg tgagccactg 1740 tgcccaggca aaagagatga ctcttaataa aaagatttcc tttttcttaa atcactgttt 1800 ctttatccgt gaattcttct tccaactaga aggaggagaa agaagtttgc ctgtatttat 1860 caccgggagg agaaggggtc tagtgtgaca tcaaaatgaa agagtgctgg aacttgagcc 1920 ccttcttgct ttccaggatc cccacagtga tcagttccca taccctggtt tattcatgta 1980 aaccacactt atttttctca gcagctactg tgtactgggc tccattctag gttcaaatca 2040 ttctatttga ttaagataga gagggtcccg actctcaagg aagttacaag agtagaggag 2100 acagacacta acccaataag catttaacaa agaagataat gttagagagt catagtgcac 2160 tgaagaaaag acatcagatg tgtgttgaaa gagagaaatg gattcaccta ctttagtttg 2220 tatgtttagg gagctctacc tgagaaagtg atattcagct gagacaacaa aataagtaga 2280 cagtcataaa gatctaacgg acgaaagatt cagggagacc gaatcgaggg aaagcactgg 2340 tgtgggaaat tatgtggagg gagagaaaga aggctagaag ggctgaggta tagaaagcaa 2400 ggaaatggag aggcagaaga tgaggtagga caaggagagg aaatcaggag cctcatcatt 2460 ataggctctg atgtccacgg taaaaaattt gaattttatt ttatttttat ttatttttaa 2520 attttattta tttatttatt ttgagatgga gtttcattct tgttgcccag gctggcatgc 2580 catggcgcaa tctctgctca ctgcaacctc cacctcctgg gttcaagtga ttctcctgcc 2640 tcagcttccc aagtaactgg gattacaggc actcaccacc atacctggct aatttttttg 2700 tatttttagt atagatgggg tatcaccatg ttgaccaggt tgatcttgaa ctcctgacct 2760 cagataatct gtctgccttg gcctcccaaa gtgctgggat tacaggcgtg agccaccacg 2820 cccggactga attttattta aatagatatg agaagctgct gtatggttac aaggagagtc 2880 aatttatatt caacttttgt gtgtgtgtgt gatggagtct cactctgttg cccaggctcg 2940 attgcagtgg cacaatctcg gctcactgca acctccgcct cccgggttca agaaattatc 3000 ctgcctcagc ctcctgagta gctgggacca caggtgcatg ccaccacagt cggctacttt 3060 ttgtattttt agtagggatg gggtttcacc atgttagcca agatgggctc gatctcctga 3120 ccttgtgatc cacccgcctc ggcctcccaa agtgctggga ttacaggcat gagccactgc 3180 gcccagctta tattcaatta ttacaattaa ttctagctac tttgtgggga ttggattgtt 3240 ggggttcaca agtggttagg aagactattt aggagcacag cagggaattc tccagggaaa 3300 acaggcttgt ggcttcatgg agtgcattag tgataaagac ggtgaaaaag ataaagtgga 3360 cagacttcgc atgtattttt gcttagcttg ttaatgaatt actgtaaagg gggtggaaca 3420 atcaagttta ttcctgagga ttttgttttg acaaataagt gggtggtagt tttgtttatt 3480 gagataggaa aaactatggg aggaaatgat ttgaagtggg tggttggaaa taaaagtttt 3540 gtttaaattt gagatgattt attgacattt atgtagagca atcagaaggt cagtggcatt 3600 taagagactc atggtgaggc tagggcttca gatatttatg ttggcagcat caatacgtgt 3660 agtgtgttaa attctaggga gtggaagagg atacataggg agatggattg tgtggagaaa 3720 aaagaagagg gcacaggcca gcaaaggcag ctgagacaga gcccagggat gttggagaaa 3780 aaccaagaga acataatgag tgtaagtcaa ggaaaataga tttttttcaa ggagaaggga 3840 gaggccaatt gtggtgagta ccactaagcg gagggggaag tgagaacttg acagagaagc 3900 aagtgctggg tttgctggag ttgatatttg cagtcaatgg agtatccagg gaggaaactg 3960 gattggacca tttgaagagc gagtagaagt gaggacgagg ttaaggttga ctgttttgag 4020 tagaacttcc ggaaggactg tgctctgggt tcaggaagcc cgctgaatct aaaggaaaag 4080 gctaaagaag ctaaagagac agaggaggac ctgtgaacaa gagatgctca gtcattagca 4140 aggaaatact ggagatcccc tgtgtgcagt ggtgactact catgcaaaag gtcacacagc 4200 caatatttat tagtgacata gaatatacca gttattactc taggtcatga gaatggtgat 4260 aaataaaatg aatccgctcg ccatcagtat atgccatgta acagtttgca gtgactgtgt 4320 accaggcctg tgaatttctg tatgcaattt caataatgat cctgctgtat ctgtggtatt 4380 taaaaacata tacatctctg gaatctaaaa ttgagggatt ataagtaaaa cccagtatta 4440 gaaatttagt gctggaaatc agattgcagt ttaaatctga gcatatagaa agtccctttc 4500 ttctatgtca gcagatgcct tttatgtgag gcttaggtat actacattat tagacataaa 4560 ccagtgtttc tgccctatgt tttcagaatg acaattcttt atgaaactca tagaagaaca 4620 gaagacaatt gcaaaatcat gatgaagata ctaattgctt tagaattaag gaatacaaaa 4680 aataatgtga gttacagtta tagggatcat aaaagtgaaa atgggaatgt atttgagtgt 4740 ttattatgtg atcagtgcta agaagagtca tcatttaatt tgacacttaa cagtaatcct 4800 gtgaggatta tgctattatt aaatgcattt gatagattac aaaaaggctt actgttggca 4860 aaaattgacc caagtagaag aggtcacctt tttattcaga ttttctgatt gtagagtttg 4920 agagtttttc catcattagg gagtagtgac tatattgtgt ctgaattatt gacagaattt 4980 ctgatattca tatataccag gttgtttctt tgagtgggga cagagatgca agggctgcta 5040 gttccaatgt acaggagaaa cttttaatca ttttgcattt atcattttaa aagttcagta 5100 tgtctataat ggtcatgtgt tgacaaacac aaggaagtat taaatcactc ctccttctga 5160 ggtttgacta gcaaattggg caagagttac caaataaaat acatgttcct agttaaatct 5220 gaatttcaga tacacgacca taatttattg gaaatccaaa tttaattggg caccctctgg 5280 ttttatttgc caaatctgtc aactctaagt gagacacatg gacatggatt acagtgctac 5340 ccatgcaagc cacagtgaca gcaacttcac acatgtttac attttaactt tctctctgta 5400 agaaagtgct tagataattt ggtgataaaa agatagccat tgtttgatcc agggtggaca 5460 cctctctgcc atcgtttcta aagggcaaac ggagatttct gcaggtcttg ctcacagtct 5520 ggggacctgc tcatgttttg aaactgtctg tatcagaatg tcattttctt ggtttctccc 5580 tttctgaggg gacttgacta caaaaccaag agttctgcct ctggccaagg ctggaaatgt 5640 gatgcctgct agtattgttg ggagtgggag actgagagaa atgagttagt tggggcattt 5700 aacgggaata aaatagctgt ggttgtgatt cattactata gataattagt ggaccagtgg 5760 cggagaaatt aagaaaaaag atgatgtgaa cgataaatga tatgattagt gactgcttgg 5820 taaggcaagg aaatcattaa atcttggttc tcatcaagtt cattttctga aaagatagca 5880 ctgcattggg accagaattc tacaaaacat tctttttaca taggaccaag attttcaaga 5940 aatatttttc aatacaattc tcagctgctc cataactaat agtagcttgt tcaacacaga 6000 tttttttaga tggttcacac ctgtggttct tacccaggga tagttcacca cccctccctt 6060 ccctcccatc atccttgggg aacagtgaca atgtttggaa aaatttttgg ttgtcacaac 6120 aggggtttct tctgatattt aatgagtaga agccaggaac actgctagag aacctacaat 6180 gttcagaaca gcctccgcca tcaacaaaga attatctggt ccaaaatgtc aatagtgctg 6240 aggctgagag cactgcttca cgctgtgctc tttctgaaaa ttctacactc acatctgtta 6300 tacactcacc acacagttca gtttttcata gtttattttt gcttcttcca ttataaaaaa 6360 ttagacagtt gcataaattt aaccactttc ttgttgaatc catttagtca atgcaagctc 6420 agtattttca tatttagttt ttgccttatg caatattttt caacattttc atgagttgtt 6480 ggtcatcacc atctctatta actttcaaca acttgctctt gtaagtcaca aatagtgatg 6540 ctgctgaaat tatttctcac taacatgcct cagatttctg tagtgattct acattttata 6600 ttattcacaa tgtaaaatgc ttctatgtac tcatttcact tttacccaag gattattttt 6660 aagttatttt tgtcatttac acacttcaaa cataaagaca aaaacatcaa aaatatatac 6720 tgtgttttac ataggtgtct attttcacac atatatgtat gtatgtttat atgtatggaa 6780 actacagaag cacatgtcgc caataagagc tctgagacac ctttgaccac ttacccttat 6840 cagatgagat ttgccaaatg agttgtggaa acaagttttt taaactgaat ttctgagctt 6900 tgtgaattta gaaatgcaaa ggaaagtttg tggacattta cagggatcat ggttttattg 6960 tcctttaaac tcttcgatac tttaccattg tcttactata aatccaaaat cctaacccca 7020 cccacgaggc tttaaatacc tggcttcttg tgatttctcc aggctaatct tttaccctcc 7080 ttcccctcag cctctctgct ttagtgaact ttctcctagt tttttgaaga agttcatcaa 7140 ttcaagcttt tgtagatggg atttcctaaa cctgaaatgt gcctcccgtt ttgtccaaac 7200 agacacgggc tccactctgc cccctggctc acacctgctt aacccgtcaa gtcacatctg 7260 aactgtcact ctttagaggg tccttctctg gcaccctaat gtaattgaga tcatcctatt 7320 attctctgct ctagaacttc ccacttccga gatttctcat tcctgtctaa cctcttgtgt 7380 gtttggtgtt tggccatcgc tttcactgct ctttaagctc ccccagcgga gtggagaggt 7440 ctgttttccc ttgtttggat tcctagaggc agcgcaggcc agacacaagg tcatcactaa 7500 gaaagtgttc acaggatgaa cgcggtgggt gctgtttaag gaaccggtaa acatgtggga 7560 tgagagaagg agcagagagt gtttttcggg tggaggctcc caggaggagg aggggcgggc 7620 tgcggtgctg ggcggatcct cctccagctc ctgcttggag gtctccagaa caagctggag 7680 gcagggatgg ggggtcccaa aagcctgggg atgagaaggg gtttccccgc atagtccccc 7740 aggcccccgt tcgcctcagg aaaacggagg atgagctcct gggctgctgg tggtgggcgt 7800 tgcggggggg gccggttaag gttcccagtg cccgcacccg gcccaggggg ccccggatgg 7860 cggcgtcgct gtcagtgtct tctcaggagg ccgcctgtgt gaccggagca ttcgtgtccc 7920 cacagcacgt ttcttggagc tgcttaagtc tgagtgtcat ttcttcaatg ggacggagcg 7980 ggtgcggttc ctggagagac acttccataa ccaggaggag tacgcgcgct tcgacagcga 8040 cgtgggggag taccgggcgg tgagggagct ggggcggcct gatgccgagt actggaacag 8100 ccagaaggac ctcctggagc agaagcgggg ccaggtggac aattactgca gacacaacta 8160 cggggttggt gagagcttca cagtgcagcg gcgaggtgag catgtcgggg ggcggggcct 8220 gggtccctgt gagctggaaa tctgagagtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg 8280 tgtgtgtgtg agagagagag agagagagag agagagagag gaagagagag acagagagag 8340 ggagcgcgcc atctgtgagc atttagaatc ctctcaatcc cgagcaagca gttctgaagg 8400 cacaggtgtg tgtgtagagt gtggatttgt ctgtgtctgt gtgcctgttg tgggagggga 8460 agcaggaggg ggctgcttct tatccttgga gacttctgtg gagaggtgac aagggaggtc 8520 ggtgcgggcg gctggagaga gaggagacct tgattgtcct gggtccttag agatgcaggg 8580 aaggaaagtg taaggtgtgt gtgggtgggg tgaaggttta ggggaggaga gctgaggggt 8640 aaggaaggtt tgggataatg tgaggaggcc ggttccagac tgtccctggc acacaccctt 8700 catgtaatct ctgaaataaa agtttgtgct gtttgtaaaa gcattagatt aagttctagg 8760 ggaattgagt agacctctaa ggcacctctg aaacttcttt aggtataaat ttcttgctag 8820 ttttttgttt ttctagtgtg tatattttta catagtagaa atgacagtga aactaacttt 8880 tgaattaaag ttttaacaca attactgtat tattataatg ctaatagttt tctagtagtt 8940 acatattatt cttttatata taatagttgt gacacaactt agggatcact ttcccctttg 9000 ttgaccttta ttatgacatt caccaaaagt tgaaaatgta tgtttctggt taatttttaa 9060 tttatatttt ttcatttgaa aaaatgtgga gaggtctgtt tttcattcaa aagagttctt 9120 ttgaattatt ttgaccgatt tattggtcaa ttttaataac tgctctaaga attccctatt 9180 ttatttggta ggtaatggac aatgatctac tgcctaatat ctctagggct tagtattttt 9240 ctcagtgact ttgtgggttc tttgtactgt aagattatta acactttatt gatatttgat 9300 tcagcatttg ctccagtttg tggtttgtat gttgattttg aaaattcttt tccatgttaa 9360 gaatttgaac atttttattt aataaaatgt attgcaaaaa ttttattaat gatttacaat 9420 ccatcttaaa tctgccattt tgtggtattt ttgtctctag gtttctcctt acttctaaaa 9480 acattgtatt tattgagagt atgctaatgt cggggatttt cctgggcata agcaccacaa 9540 gtaatgagtt ccagaccctg ccttaatcca aatgtgattc tggaaagaaa aatcatttta 9600 caactggcct gataataatt ctgcttgtgt tgcacggggg atacattgag cagctgaatg 9660 aaaatataag aactttcaaa actaaaatga cgctcctaaa tccttctgtc tgctttagga 9720 ctcatgcttt tctaggaacg taaaaatttg gagaatcatt tctgtctgtc ccaccttccc 9780 aggggcagaa ccatttctgt ggtgttctaa ggtgtgagtg catggcagta gtattcctaa 9840 aaattcatac tcggttttct catgtaccca actctgtccc tttgtctatg tacattgctt 9900 taaatcatat ttttctgtca cggagtacaa ggatgataaa taggtgccaa gtggagcacc 9960 caagtgtgat gagccccctt acggtggaat ggagtgagaa gctttctgat ctcataaatt 10020 gaaggctatc ttcagtcatt atgtatttta cataaattaa tcctcatgta accccaagag 10080 gtaaattagt ataattatcc ttcattgggg gtgacaaagt tgagacacag aagaatcaac 10140 tcttccagga tcaaccagta aaaggcagac cttggatttg aaccaggcaa cctggctcag 10200 atatcagttt taattactac actctgtact ttcaaaaatt tgtaaacact ttgacaatgc 10260 atgccaattt caagttatga agaagcaaac gcaatttttc acatctctca aatctaatgg 10320 gtcctcacta tcaagattaa attccaggct gatgacactg taaggccaca tggccagctg 10380 tgctggaggc ctggtcaagg tcagagcctg ggtttgcaga gaagcagaca aacagccaaa 10440 ccagcagaat tactctgtct tcctgactca ttccctctac ctttttttct cctagtccat 10500 cctcaggtga ctgtgtatcc tgcaaagacc cagcccctgc agcaccacaa cctcctggtc 10560 tgctctgtga gtggtttcta tccaggcagc attgaagtca ggtggttccg gaacggccag 10620 gaagagaagg ctggggtggt gtccacgggc ctgatccaga atggagactg gaccttccag 10680 accctggtga tgctagaaac agttcctcgg agtggagagg tttacacctg ccaagtggag 10740 cacccaagcg taacgagccc tctcacagtg gaatggagtg agcagctttc tgatttcata 10800 catttctcac ccaccaagaa ggggactgtg ctaatccctg agtgtcaggt ttctcctctc 10860 ccacgtccta ttttcatttg ctccatgttc tcatctccat cagcacaggt cactggggat 10920 agccctgtaa cagtgtgtag aaacacctgt actccctgtg gaatcagtca tgcatttttt 10980 ttttttgaac ctccccatga tgtcacaggt cagggtcacc cgatctcccc aagctccagg 11040 ccctgcttct gggtctgaga ctgagtttct ggtgctgctg ctctgagtta cttgttttga 11100 tctgggaaga ggggaagcat aggggcctac ctgacatgag gggagtccaa tctcagctct 11160 accttttatt agctctgtca ctctagacaa actacttagc ttcattgagt ctcaggcttt 11220 ctgtggatca gatgttgaac tcttgcctta catcaaggct gtaatatttg aatgagtttg 11280 atgtcggaac cttgtaactg ttcagtgtga tttgaaatcc tttttttctc ccgaaatggc 11340 tagttatttt agttcttgtg gggcagcctt cttccccatt ttcaaagctc tgaatcttag 11400 agtctcaagt aaagaggttc aatctggaat aagcatcact aaacctggct tcctctctca 11460 ggtgcacggt ctgaatctgc acagagcaag atgctgagtg gagtcggggg ctttgtgctg 11520 ggcctgctct tccttggggc cgggctgttc atctacttca ggaatcagaa aggtaaggag 11580 tctttggtag ctggctctct ccataggctt ttctggagga ggaactatgg ctttgctgag 11640 gttagttctc agtatatgag tggccctgaa taaagccttt ctttccccaa acggctctaa 11700 tgtcctgcta atccagaaat catcagtgca tggttactat gtgaaagcat aatagcttgt 11760 ggcctgcaga gacaagagga aggttaacaa gtaggggtcc tttggtttga gatcttggag 11820 caaattaagg aagagccact aaagttaatg gaattacact ggatcctgtg acagacactt 11880 catgcttcat gggtcacatg gtctgtttct gctcctctct gccctggttg gtgtgggttt 11940 tggtgttaga actctccggt gggagatctg ggactgggat attgtgttgg aggacagatt 12000 tgcttcaata tcttttaagt gtatatcttt tcctcttttt cccaggacac tctggacttc 12060 agccaacagg taataccttt taatcctctt ttagacacag attcagtttc tccagtgaga 12120 ggtgaagcca gctggacttc tgggttgggt ggggacttgg agaacttttc tgtcttacaa 12180 gaggtttcta aatgcaccaa tgagtgctct gtaaaaacac accaatgagt gctctgtaaa 12240 aattgacact ctgtggctcg ctagatgttt gtaagatgga ccaatcagca ctctgtaaaa 12300 tggaccaatc cacactctgt aaaatggacc aatcagcact ctttaaaatg gaccaatcag 12360 caggatacgg gcggggacaa ataagggaat aaaagctggt caccctagcc agcaccggca 12420 acctgcttag gtccttttct atgctgtgga aggtctgttc tttcactctt cacaataaat 12480 cttgtgctca ctctttgggt ccgtgccacc tttaagagct ataacactca ctgcaagggt 12540 ctgtggcttc actcttgaag tcagccagac cctgaaccta ccggaaggaa caaactcagg 12600 acacactaga atgatggtag aggtgataag gcatgagaca gaaataatag gaaagacttt 12660 ggatccaaat ttctgatcag gcaatttaca ccaaaactcc tcctctccac ttaaaaaagg 12720 cctgtgctct gcaggactat tggctctggg agactcagga acttgttttt cttcttcctg 12780 cagtgttctc atctgagtcc ttcaaagagg gggaaagaaa cgttagtaga gccaggttga 12840 aaacaacact ctcctctgtc ttttgca 12867 // ID KX687290; SV 1; linear; genomic DNA; STD; HUM; 12869 BP. XX AC KX687290; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate DL9 MHC class II antigen (HLA-DRB3) gene, DE HLA-DRB3*02_02_01_02v2 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-12869 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-12869 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 593b8a54b06114286a9700b48fa45c69. XX FH Key Location/Qualifiers FH FT source 1..12869 FT /organism="Homo sapiens" FT /isolate="DL9" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <174..>12071 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*02_02_01_02v2" FT mRNA join(<174..273,7926..8195,10500..10781,11464..11574, FT 12048..>12071) FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*02_02_01_02v2" FT /product="MHC class II antigen" FT CDS join(174..273,7926..8195,10500..10781,11464..11574, FT 12048..>12071) FT /codon_start=1 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*02_02_01_02v2" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1D7" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1D7" FT /protein_id="AST15803.1" FT /translation="MVCLKLPGGSSLAALTVTLMVLSSRLAFAGDTRPRFLELLKSECH FT FFNGTERVRFLERHFHNQEEYARFDSDVGEYRAVRELGRPDAEYWNSQKDLLEQKRGQV FT DNYCRHNYGVGESFTVQRRVHPQVTVYPAKTQPLQHHNLLVCSVSGFYPGSIEVRWFRN FT GQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWSARSE FT SAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPT" XX SQ Sequence 12869 BP; 3469 A; 2545 C; 2979 G; 3876 T; 0 other; gctgttgaac tcagatgctg attggttctc cgacacgaga ttacccaatc caggagcaag 60 gaaatcagta acttcctccc tataatttgg aatgtgggtg gaggggggtc atagttctcc 120 ctgagtgaga cttgcctgct cctctggccc ctggtcctgt cctcttctcc agcatggtgt 180 gtctgaagct ccctggaggc tccagcttgg cagcgttgac agtgacactg atggtgctga 240 gctcccgact ggctttcgct ggggacaccc gacgtaagag cacattgtgg gtgctgagct 300 actatggggt gggggaatat agggagttgt gttaacattg tgcccaggcc atgtccctta 360 agaaattgtg aggttttctt cagagattgc tcatctttat caagggatcg caaattattt 420 cctccacaaa aggaacttgg ctacttgccc tctccatgag acttgtgtaa ggggcctttg 480 tacaggccat ttcttctcaa atctccacca ataaaacctt tgcatcacat gtcctcaggg 540 tctttagagg atttggaaat aaggatgcta aaataaattc cccaaacagc aattcccttt 600 attatgttga cttatgtcag acaaaaggag gtttttactg aaaattttgt gggagtcaag 660 ggaattcaat gggtctctcc tagacgatcc tgggttatgt cctccacagg acctgtggtg 720 ttggcccctc ttcctcatat gtgaggatgg acccagtggc ctccctagta tctcctttct 780 tttctttctg aactccaatg tttataaagc ctgtatccct gtagtgtatg taggttgtct 840 gacagaagtt atacttagtg ctcttccttt cttatgggga aaaatccctg gaactgaagc 900 tgagatcatt agtacttgga atcaccttac agatacagag catttatgag gtattctttg 960 gtgcctaaag aacttaaggc atcctctgaa aaactggccc aggttagtgt ttattatgaa 1020 tctttttaac ctttctatac ttgtttctcc tacatctcct acatgctcta actagacatg 1080 acagaagaga tttaactaat gtagtataaa ttatatgaaa ttctattttt gtaagtcaaa 1140 aataatcaaa tatcagaaat ttaataatgt tcaaactata tactgtgtgg ggttaccgag 1200 acaatgtgga cattgttcac atctcatagg gctgaaagtc aatgggcaag tcctggaaac 1260 tcattgtctt actgcggtct tgtcctcagt ttcataggtt cacccatcat gccctcagct 1320 ttccttaatt agccatgtct gcttacctct tcctcccatt tctctctatt tttccccaac 1380 tatgttgtca tcatttccag aaatctctaa agcttgcaca gatccttagc actatgagat 1440 ccattgaaag agataatatt tttctctttg agatagggcc tgcctctgtc acccaggctg 1500 tagctcagtg gtgtgatcga ggctcactgc aacctctgcc tcccatgctc aagcaatcct 1560 ccctcctcag gctccagagt agctgagaat acaggcaggc aaccacgccc agctaatttt 1620 tgcaattttg gtagagagga gattttgcca tattgcccag gctggtctta aactgctgaa 1680 ctcaagcaat cctcctgcct tagcctccca acatgctagg attatagatg tgagccactg 1740 tgcccaggca aaagagatga ctcttaataa aaagatttcc tttttcttaa atcactgttt 1800 ctttatccgt gaattcttct tccaactaga aggaggagaa agaagtttgc ctgtatttat 1860 caccgggagg agaaggggtc tagtgtgaca tcaaaatgaa agagtgctgg aacttgagcc 1920 ccttcttgct ttccaggatc cccacagtga tcagttccca taccctggtt tattcatgta 1980 aaccacactt atttttctca gcagctactg tgtactgggc tccattctag gttcaaatca 2040 ttctatttga ttaagataga gagggtcccg actctcaagg aagttacaag agtagaggag 2100 acagacacta acccaataag catttaacaa agaagataat gttagagagt catagtgcac 2160 tgaagaaaag acatcagatg tgtgttgaaa gagagaaatg gattcaccta ctttagtttg 2220 tatgtttagg gagctctacc tgagaaagtg atattcagct gagacaacaa aataagtaga 2280 cagtcataaa gatctaacgg acgaaagatt cagggagacc gaatcgaggg aaagcactgg 2340 tgtgggaaat tatgtggagg gagagaaaga aggctagaag ggctgaggta tagaaagcaa 2400 ggaaatggag aggcagaaga tgaggtagga caaggagagg aaatcaggag cctcatcatt 2460 ataggctctg atgtccacgg taaaaaattt gaattttatt ttatttttat ttatttttaa 2520 attttattta tttatttatt ttgagatgga gtttcattct tgttgcccag gctggcatgc 2580 catggcgcaa tctctgctca ctgcaacctc cacctcctgg gttcaagtga ttctcctgcc 2640 tcagcgtccc aagtaactgg gattacaggc actcaccacc atacctggct aatttttttg 2700 tatttttagt atagatgggg tatcaccatg ttgaccaggt tgatcttgaa ctcctgacct 2760 cagataatct gtctgccttg gcctcccaaa gtgctgggat tacaggcgtg agccaccacg 2820 cccggactga attttattta aatagatatg agaagctgct gtatggttac aaggagagtc 2880 aatttatatt caacttttgt gtgtgtgtgt gatggagtct cactctgttg cccaggctcg 2940 attgcagtgg cacaatctcg gctcactgca acctccgcct cccgggttca agaaattatc 3000 ctgcctcagc ctcctgagta gctgggacca caggtgcatg ccaccacagt cggctacttt 3060 ttgtattttt agtagggatg gggtttcacc atgttagcca agatgggctc gatctcctga 3120 ccttgtgatc cacccgcctc ggcctcccaa agtgctggga ttacaggcat gagccactgc 3180 gcccagctta tattcaatta ttacaattaa ttctagctac tttgtgggga ttggattgtt 3240 ggggttcaca agtggttagg aagactattt aggagcacag cagggaattc tccagggaaa 3300 acaggcttgt ggcttcatgg agtgcattag tgataaagac ggtgaaaaag ataaagtgga 3360 cagacttcgc atgtattttt gcttagcttg ttaatgaatt actgtaaagg gggtggaaca 3420 atcaagttta ttcctgagga ttttgttttg acaaataagt gggtggtagt tttgtttatt 3480 gagataggaa aaactatggg aggaaatgat ttgaagtggg tggttggaaa taaaagtttt 3540 gtttaaattt gagatgattt attgacattt atgtagagca atcagaaggt cagtggcatt 3600 taagagactc atggtgaggc tagggcttca gatatttatg ttggcagcat caatacgtgt 3660 agtgtgttaa attctaggga gtggaagagg atacataggg agatggattg tgtggagaaa 3720 aaagaagagg gcacaggcca gcaaaggcag ctgagacaga gcccagggat gttggagaaa 3780 aaccaagaga acataatgag tgtaagtcaa ggaaaataga tttttttcaa ggagaaggga 3840 gaggccaatt gtggtgagta ccactaagcg gagggggaag tgagaacttg acagagaagc 3900 aagtgctggg tttgctggag ttgatatttg cagtcaatgg agtatccagg gaggaaactg 3960 gattggacca tttgaagagc gagtagaagt gaggacgagg ttaaggttga ctgttttgag 4020 tagaacttcc ggaaggactg tgctctgggt tcaggaagcc cgctgaatct aaaggaaaag 4080 gctaaagaag ctaaagagac agaggaggac ctgtgaacaa gagatgctca gtcattagca 4140 aggaaatact ggagatcccc tgtgtgcagt ggtgactact catgcaaaag gtcacacagc 4200 caatatttat tagtgacata gaatatacca gttattactc taggtcatga gaatggtgat 4260 aaataaaatg aatccgctcg ccatcagtat atgccatgta acagtttgca gtgactgtgt 4320 accaggcctg tgaatttctg tatgcaattt caataatgat cctgctgtat ctgtggtatt 4380 taaaaacata tacatctctg gaatctaaaa ttgagggatt ataagtaaaa cccagtatta 4440 gaaatttagt gctggaaatc agattgcagt ttaaatctga gcatatagaa agtccctttc 4500 ttctatgtca gcagatgcct tttatgtgag gcttaggtat actacattat tagacataaa 4560 ccagtgtttc tgccctatgt tttcagaatg acaattcttt atgaaactca tagaagaaca 4620 gaagacaatt gcaaaatcat gatgaagata ctaattgctt tagaattaag gaatacaaaa 4680 aataatgtga gttacagtta tagggatcat aaaagtgaaa atgggaatgt atttgagtgt 4740 ttattatgtg atcagtgcta agaagagtca tcatttaatt tgacacttaa cagtaatcct 4800 gtgaggatta tgctattatt aaatgcattt gatagattac aaaaaggctt actgttggca 4860 aaaattgacc caagtagaag aggtcacctt tttattcaga ttttctgatt gtagagtttg 4920 agagtttttc catcattagg gagtagtgac tatattgtgt ctgaattatt gacagaattt 4980 ctgatattca tatataccag gttgtttctt tgagtgggga cagagatgca agggctgcta 5040 gttccaatgt acaggagaaa cttttaatca ttttgcattt atcattttaa aagttcagta 5100 tgtctataat ggtcatgtgt tgacaaacac aaggaagtat taaatcactc ctccttctga 5160 ggtttgacta gcaaattggg caagagttac caaataaaat acatgttcct agttaaatct 5220 gaatttcaga tacacgacca taatttattg gaaatccaaa tttaattggg caccctctgg 5280 ttttatttgc caaatctgtc aactctaagt gagacacatg gacatggatt acagtgctac 5340 ccatgcaagc cacagtgaca gcaacttcac acatgtttac attttaactt tctctctgta 5400 agaaagtgct tagataattt ggtgataaaa agatagccat tgtttgatcc agggtggaca 5460 cctctctgcc atcgtttcta aagggcaaac ggagatttct gcaggtcttg ctcacagtct 5520 ggggacctgc tcatgttttg aaactgtctg tatcagaatg tcattttctt ggtttctccc 5580 tttctgaggg gacttgacta caaaaccaag agttctgcct ctggccaagg ctggaaatgt 5640 gatgcctgct agtattgttg ggagtgggag actgagagaa atgagttagt tggggcattt 5700 aacgggaata aaatagctgt ggttgtgatt cattactata gataattagt ggaccagtgg 5760 cggagaaatt aagaaaaaag atgatgtgaa cgataaatga tatgattagt gactgcttgg 5820 taaggcaagg aaatcattaa atcttggttc tcatcaagtt cattttctga aaagatagca 5880 ctgcattggg accagaattc tacaaaacat tctttttaca taggaccaag attttcaaga 5940 aatatttttc aatacaattc tcagctgctc cataactaat agtagcttgt tcaacacaga 6000 tttttttaga tggttcacac ctgtggttct tacccaggga tagttcacca cccctccctt 6060 ccctcccatc atccttgggg aacagtgaca atgtttggaa aaatttttgg ttgtcacaac 6120 aggggtttct tctgatattt aatgagtaga agccaggaac actgctagag aacctacaat 6180 gttcagaaca gcctccgcca tcaacaaaga attatctggt ccaaaatgtc aatagtgctg 6240 aggctgagag cactgcttca cgctgtgctc tttctgaaaa ttctacactc acatctgtta 6300 tacactcacc acacagttca gtttttcata gtttattttt gcttcttcca ttataaaaaa 6360 ttagacagtt gcataaattt aaccactttc ttgttgaatc catttagtca atgcaagctc 6420 agtattttca tatttagttt ttgccttatg caatattttt caacattttc atgagttgtt 6480 ggtcatcacc atctctatta actttcaaca acttgctctt gtaagtcaca aatagtgatg 6540 ctgctgaaat tatttctcac taacatgcct cagatttctg tagtgattct acattttata 6600 ttattcacaa tgtaaaatgc ttctatgtac tcatttcact tttacccaag gattattttt 6660 aagttatttt tgtcatttac acacttcaaa cataaagaca aaaacatcaa aaatatatac 6720 tgtgttttac ataggtgtct attttcacac atatatgtat gtatgtttat atgtatggaa 6780 actacagaag cacatgtcgc caataagagc tctgagacac ctttgaccac ttacccttat 6840 cagatgagat ttgccaaatg agttgtggaa acaagttttt taaactgaat ttctgagctt 6900 tgtgaattta gaaatgcaaa ggaaagtttg tggacattta cagggatcat ggttttattg 6960 tcctttaaac tcttcgatac tttaccattg tcttactata aatccaaaat cctaacccca 7020 cccacgaggc tttaaatacc tggcttcttg tgatttctcc aggctaatct tttaccctcc 7080 ttcccctcag cctctctgct ttagtgaact ttctcctagt tttttgaaga agttcatcaa 7140 ttcaagcttt tgtagatggg atttcctaaa cctgaaatgt gcctcccgtt ttgtccaaac 7200 agacacgggc tccactctgc cccctggctc acacctgctt aacccgtcaa gtcacatctg 7260 aactgtcact ctttagaggg tccttctctg gcaccctaat gtaattgaga tcatcctatt 7320 attctctgct ctagaacttc ccacttccga gatttctcat tcctgtctaa cctcttgtgt 7380 gtttggtgtt tggccatcgc tttcactgct ctttaagctc ccccagcgga gtggagaggt 7440 ctgttttccc ttgtttggat tcctagaggc agcgcaggcc agacacaagg tcatcactaa 7500 gaaagtgttc acaggatgaa cgcggtgggt gctgtttaag gaaccggtaa acatgtggga 7560 tgagagaagg agcagagagt gtttttcggg tggaggctcc caggaggagg aggggcgggc 7620 tgcggtgctg ggcggatcct cctccagctc ctgcttggag gtctccagaa caagctggag 7680 gcagggatgg ggggtcccaa aagcctgggg atgagaaggg gtttccccgc atagtccccc 7740 aggcccccgt tcgcctcagg aaaacggagg atgagctcct gggctgctgg tggtgggcgt 7800 tgcggggggg gccggttaag gttcccagtg cccgcacccg gcccaggggg ccccggatgg 7860 cggcgtcgct gtcagtgtct tctcaggagg ccgcctgtgt gaccggagca ttcgtgtccc 7920 cacagcacgt ttcttggagc tgcttaagtc tgagtgtcat ttcttcaatg ggacggagcg 7980 ggtgcggttc ctggagagac acttccataa ccaggaggag tacgcgcgct tcgacagcga 8040 cgtgggggag taccgggcgg tgagggagct ggggcggcct gatgccgagt actggaacag 8100 ccagaaggac ctcctggagc agaagcgggg ccaggtggac aattactgca gacacaacta 8160 cggggttggt gagagcttca cagtgcagcg gcgaggtgag catgtcgggg ggcggggcct 8220 gggtccctgt gagctggaaa tctgagagtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg 8280 tgtgtgtgtg tgtgtgagag agagagagag agagagagag agaggaagag agagacagag 8340 agagggagcg cgccatctgt gagcatttag aatcctctca atcccgagca agcagttctg 8400 aaggcacagg tgtgtgtgta gagtgtggat ttgtctgtgt ctgtgtgcct gttgtgggag 8460 ggaaagcagg agggggctgc ttcttatcct tggagacttc tgtggagagg tgacaaggga 8520 ggtcggtgcg ggcggctgga gagagaggag accttgattg tcctgggtcc ttagagatgc 8580 agggaaggaa agtgtaaggt gtgtgtgggt ggggtgaagg tttaggggag gagagctgag 8640 gggtaaggaa ggtttgggat aatgtgagga ggccggttcc agactgtccc tggcacacac 8700 ccttcatgta atctctgaaa taaaagtttg tgctgtttgt aaaagcatta gattaagttc 8760 taggggaatt gagtagacct ctaaggcacc tctgaaactt ctttaggtat aaatttcttg 8820 ctagtttttt gtttttctag tgtgtatatt tttacatagt agaaatgaca gtgaaactaa 8880 cttttgaatt aaagttttaa cacaattact gtattattat aatgctaata gttttctagt 8940 agttacatat tattctttta tatataatag ttgtgacaca acttagggat cactttcccc 9000 tttgttgacc tttattatga cattcaccaa aagttgaaaa tgtatgtttc tggttaattt 9060 ttaatttata ttttttcatt tgaaaaaatg tggagaggtc tgtttttcat tcaaaagagt 9120 tcttttgaat tattttgacc gatttattgg tcaattttaa taactgctct aagaattccc 9180 tattttattt ggtaggtaat ggacaatgat ctactgccta atatctctag ggcttagtat 9240 ttttctcagt gactttgtgg gttctttgta ctgtaagatt attaacactt tattgatatt 9300 tgattcagca tttgctccag tttgtggttt gtatgttgat tttgaaaatt cttttccatg 9360 ttaagaattt gaacattttt atttaataaa atgtattgca aaaattttat taatgattta 9420 caatccatct taaatctgcc attttgtggt atttttgtct ctaggtttct ccttacttct 9480 aaaaacattg tatttattga gagtatgcta atgtcgggga ttttcctggg cataagcacc 9540 acaagtaatg agttccagac cctgccttaa tccaaatgtg attctggaaa gaaaaatcat 9600 tttacaactg gcctgataat aattctgctt gtgttgcacg ggggatacat tgagcagctg 9660 aatgaaaata taagaacttt caaaactaaa atgacgctcc taaatccttc tgtctgcttt 9720 aggactcatg cttttctagg aacgtaaaaa tttggagaat catttctgtc tgtcccacct 9780 tcccaggggc agaaccattt ctgtggtgtt ctaaggtgtg agtgcatggc agtagtattc 9840 ctaaaaattc atactcggtt ttctcatgta cccaactctg tccctttgtc tatgtacatt 9900 gctttaaatc atatttttct gtcacggagt acaaggatga taaataggtg ccaagtggag 9960 cacccaagtg tgatgagccc ccttacggtg gaatggagtg agaagctttc tgatctcata 10020 aattgaaggc tatcttcagt cattatgtat tttacataaa ttaatcctca tgtaacccca 10080 agaggtaaat tagtataatt atccttcatt gggggtgaca aagttgagac acagaagaat 10140 caactcttcc aggatcaacc agtaaaaggc agaccttgga tttgaaccag gcaacctggc 10200 tcagatatca gttttaatta ctacactctg tactttcaaa aatttgtaaa cactttgaca 10260 atgcatgcca atttcaagtt atgaagaagc aaacgcaatt tttcacatct ctcaaatcta 10320 atgggtcctc actatcaaga ttaaattcca ggctgatgac actgtaaggc cacatggcca 10380 gctgtgctgg aggcctggtc aaggtcagag cctgggtttg cagagaagca gacaaacagc 10440 caaaccagca gaattactct gtcttcctga ctcattccct ctaccttttt ttctcctagt 10500 ccatcctcag gtgactgtgt atcctgcaaa gacccagccc ctgcagcacc acaacctcct 10560 ggtctgctct gtgagtggtt tctatccagg cagcattgaa gtcaggtggt tccggaacgg 10620 ccaggaagag aaggctgggg tggtgtccac gggcctgatc cagaatggag actggacctt 10680 ccagaccctg gtgatgctag aaacagttcc tcggagtgga gaggtttaca cctgccaagt 10740 ggagcaccca agcgtaacga gccctctcac agtggaatgg agtgagcagc tttctgattt 10800 catacatttc tcacccacca agaaggggac tgtgctaatc cctgagtgtc aggtttctcc 10860 tctcccacgt cctattttca tttgctccat gttctcatct ccatcagcac aggtcactgg 10920 ggatagccct gtaacagtgt gtagaaacac ctgtactccc tgtggaatca gtcatgcttt 10980 ttttttttga acctccccat gatgtcacag gtcagggtca cccgatctcc ccaagctcca 11040 ggccctgctt ctgggtctga gactgagttt ctggtgctgc tgctctgagt tacttgtttt 11100 gatctgggaa gaggggaagc ataggggcct acctgacatg aggggagtcc aatctcagct 11160 ctacctttta ttagctctgt cactctagac aaactactta gcttcattga gtctcaggct 11220 ttctgtggat cagatgttga actcttgcct tacatcaagg ctgtaatatt tgaatgagtt 11280 tgatgtcgga accttgtaac tgttcagtgt gatttgaaat cctttttttc tcccgaaatg 11340 gctagttatt ttagttcttg tggggcagcc ttcttcccca ttttcaaagc tctgaatctt 11400 agagtctcaa gtaaagaggt tcaatctgga ataagcatca ctaaacctgg cttcctctct 11460 caggtgcacg gtctgaatct gcacagagca agatgctgag tggagtcggg ggctttgtgc 11520 tgggcctgct cttccttggg gccgggctgt tcatctactt caggaatcag aaaggtaagg 11580 agtctttggt agctggctct ctccataggc ttttctggag gaggaactat ggctttgctg 11640 aggttagttc tcagtatatg agtggccctg aataaagcct ttctttcccc aaacggctct 11700 aatgtcctgc taatccagaa atcatcagtg catggttact atgtgaaagc ataatagctt 11760 gtggcctgca gagacaagag gaaggttaac aagtaggggt cctttggttt gagatcttgg 11820 agcaaattaa ggaagagcca ctaaagttaa tggaattaca ctggatcctg tgacagacac 11880 ttcatgcttc atgggtcaca tggtctgttt ctgctcctct ctgccctggt tggtgtgggt 11940 tttggtgtta gaactctccg gtgggagatc tgggactggg atattgtgtt ggaggacaga 12000 tttgcttcaa tatcttttaa gtgtatatct tttcctcttt ttcccaggac actctggact 12060 tcagccaaca ggtaatacct tttaatcctc ttttagacac agattcagtt tctccagtga 12120 gaggtgaagc cagctggact tctgggttgg gtggggactt ggagaacttt tctgtcttac 12180 aagaggtttc taaatgcacc aatgagtgct ctgtaaaaac acaccaatga gtgctctgta 12240 aaaattgaca ctctgtggct cgctagatgt ttgtaagatg gaccaatcag cactctgtaa 12300 aatggaccaa tccacactct gtaaaatgga ccaatcagca ctctttaaaa tggaccaatc 12360 agcaggatac gggcagggac aaataaggga ataaaagctg gtcaccctag ccagcaccgg 12420 caacctgctt aggtcctttt ctatgctgtg gaaggtctgt tctttcactc ttcacaataa 12480 atcttgtgct cactctttgg gtccgtgcca cctttaagag ctataacact cactgcaagg 12540 gtctgtggct tcactcttga agtcagccag accctgaacc taccggaagg aacaaactca 12600 ggacacacta gaatgatggt agaggtgata aggcatgaga cagaaataat aggaaagact 12660 ttggatccaa atttctgatc aggcaattta caccaaaact cctcctctcc acttaaaaaa 12720 ggcctgtgct ctgcaggact attggctctg ggagactcag gaacttgttt ttcttcttcc 12780 tgcagtgttc tcatctgagt ccttcaaaga gggggaaaga aacgttagta gagccaggtt 12840 gaaaacaaca ctctcctctg tcttttgca 12869 // ID KX687291; SV 1; linear; genomic DNA; STD; HUM; 12863 BP. XX AC KX687291; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate DL12 MHC class II antigen (HLA-DRB3) gene, DE HLA-DRB3*02_02_01_02v3 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-12863 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-12863 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 5ea7477c1a93e936fd10339ab3cf3058. XX FH Key Location/Qualifiers FH FT source 1..12863 FT /organism="Homo sapiens" FT /isolate="DL12" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <174..>12065 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*02_02_01_02v3" FT mRNA join(<174..273,7926..8195,10494..10775,11458..11568, FT 12042..>12065) FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*02_02_01_02v3" FT /product="MHC class II antigen" FT CDS join(174..273,7926..8195,10494..10775,11458..11568, FT 12042..>12065) FT /codon_start=1 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*02_02_01_02v3" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1B7" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1B7" FT /protein_id="AST15804.1" FT /translation="MVCLKLPGGSSLAALTVTLMVLSSRLAFAGDTRPRFLELLKSECH FT FFNGTERVRFLERHFHNQEEYARFDSDVGEYRAVRELGRPDAEYWNSQKDLLEQKRGQV FT DNYCRHNYGVGESFTVQRRVHPQVTVYPAKTQPLQHHNLLVCSVSGFYPGSIEVRWFRN FT GQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWSARSE FT SAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPT" XX SQ Sequence 12863 BP; 3467 A; 2544 C; 2977 G; 3875 T; 0 other; gctgttgaac tcagatgctg attggttctc cgacacgaga ttacccaatc caggagcaag 60 gaaatcagta acttcctccc tataatttgg aatgtgggtg gaggggggtc atagttctcc 120 ctgagtgaga cttgcctgct cctctggccc ctggtcctgt cctcttctcc agcatggtgt 180 gtctgaagct ccctggaggc tccagcttgg cagcgttgac agtgacactg atggtgctga 240 gctcccgact ggctttcgct ggggacaccc gacgtaagag cacattgtgg gtgctgagct 300 actatggggt gggggaatat agggagttgt gttaacattg tgcccaggcc atgtccctta 360 agaaattgtg aggttttctt cagagattgc tcatctttat caagggatcg caaattattt 420 cctccacaaa aggaacttgg ctacttgccc tctccatgag acttgtgtaa ggggcctttg 480 tacaggccat ttcttctcaa atctccacca ataaaacctt tgcatcacat gtcctcaggg 540 tctttagagg atttggaaat aaggatgcta aaataaattc cccaaacagc aattcccttt 600 attatgttga cttatgtcag acaaaaggag gtttttactg aaaattttgt gggagtcaag 660 ggaattcaat gggtctctcc tagacgatcc tgggttatgt cctccacagg acctgtggtg 720 ttggcccctc ttcctcatat gtgaggatgg acccagtggc ctccctagta tctcctttct 780 tttctttctg aactccaatg tttataaagc ctgtatccct gtagtgtatg taggttgtct 840 gacagaagtt atacttagtg ctctttcttt cttatgggga aaaatccctg gaactgaagc 900 tgagatcatt agtacttgga atcaccttac agatacagag catttatgag gtattctttg 960 gtgcctaaag aacttaaggc atcctctgaa aaactggccc aggttagtgt ttattatgaa 1020 tctttttaac ctttctatac ttgtttctcc tacatctcct acatgctcta actagacatg 1080 acagaagaga tttaactaat gtagtataaa ttatatgaaa ttctattttt gtaagtcaaa 1140 aataatcaaa tatcagaaat ttaataatgt tcaaactata tactgtgtgg ggttaccgag 1200 acaatgtgga cattgttcac atctcatagg gctgaaagtc aatgggcaag tcctggaaac 1260 tcattgtctt actgcggtct tgtcctcagt ttcataggtt cacccatcat gccctcagct 1320 ttccttaatt agccatgtct gcttacctct tcctcccatt tctctctatt tttccccaac 1380 tatgttgtca tcatttccag aaatctctaa agcttgcaca gatccttagc actatgagat 1440 ccattgaaag agataatatt tttctctttg agatagggcc tgcctctgtc acccaggctg 1500 tagctcagtg gtgtgatcga ggctcactgc aacctctgcc tcccatgctc aagcaatcct 1560 ccctcctcag gctccagagt agctgagaat acaggcaggc aaccacgccc agctaatttt 1620 tgcaattttg gtagagagga gattttgcca tattgcccag gctggtctta aactgctgaa 1680 ctcaagcaat cctcctgcct tagcctccca acatgctagg attatagatg tgagccactg 1740 tgcccaggca aaagagatga ctcttaataa aaagatttcc tttttcttaa atcactgttt 1800 ctttatccgt gaattcttct tccaactaga aggaggagaa agaagtttgc ctgtatttat 1860 caccgggagg agaaggggtc tagtgtgaca tcaaaatgaa agagtgctgg aacttgagcc 1920 ccttcttgct ttccaggatc cccacagtga tcagttccca taccctggtt tattcatgta 1980 aaccacactt atttttctca gcagctactg tgtactgggc tccattctag gttcaaatca 2040 ttctatttga ttaagataga gagggtcccg actctcaagg aagttacaag agtagaggag 2100 acagacacta acccaataag catttaacaa agaagataat gttagagagt catagtgcac 2160 tgaagaaaag acatcagatg tgtgttgaaa gagagaaatg gattcaccta ctttagtttg 2220 tatgtttagg gagctctacc tgagaaagtg atattcagct gagacaacaa aataagtaga 2280 cagtcataaa gatctaacgg acgaaagatt cagggagacc gaatcgaggg aaagcactgg 2340 tgtgggaaat tatgtggagg gagagaaaga aggctagaag ggctgaggta tagaaagcaa 2400 ggaaatggag aggcagaaga tgaggtagga caaggagagg aaatcaggag cctcatcatt 2460 ataggctctg atgtccacgg taaaaaattt gaattttatt ttatttttat ttatttttaa 2520 attttattta tttatttatt ttgagatgga gtttcattct tgttgcccag gctggcatgc 2580 catggcgcaa tctctgctca ctgcaacctc cacctcctgg gttcaagtga ttctcctgcc 2640 tcagcttccc aagtaactgg gattacaggc actcaccacc atacctggct aatttttttg 2700 tatttttagt atagatgggg tatcaccatg ttgaccaggt tgatcttgaa ctcctgacct 2760 cagataatct gtctgccttg gcctcccaaa gtgctgggat tacaggcgtg agccaccacg 2820 cccggactga attttattta aatagatatg agaagctgct gtatggttac aaggagagtc 2880 aatttatatt caacttttgt gtgtgtgtgt gatggagtct cactctgttg cccaggctcg 2940 attgcagtgg cacaatctcg gctcactgca acctccgcct cccgggttca agaaattatc 3000 ctgcctcagc ctcctgagta gctgggacca caggtgcatg ccaccacagt cggctacttt 3060 ttgtattttt agtagggatg gggtttcacc atgttagcca agatgggctc gatctcctga 3120 ccttgtgatc cacccgcctc ggcctcccaa agtgctggga ttacaggcat gagccactgc 3180 gcccagctta tattcaatta ttacaattaa ttctagctac tttgtgggga ttggattgtt 3240 ggggttcaca agtggttagg aagactattt aggagcacag cagggaattc tccagggaaa 3300 acaggcttgt ggcttcatgg agtgcattag tgataaagac ggtgaaaaag ataaagtgga 3360 cagacttcgc atgtattttt gcttagcttg ttaatgaatt actgtaaagg gggtggaaca 3420 atcaagttta ttcctgagga ttttgttttg acaaataagt gggtggtagt tttgtttatt 3480 gagataggaa aaactatggg aggaaatgat ttgaagtggg tggttggaaa taaaagtttt 3540 gtttaaattt gagatgattt attgacattt atgtagagca atcagaaggt cagtggcatt 3600 taagagactc atggtgaggc tagggcttca gatatttatg ttggcagcat caatacgtgt 3660 agtgtgttaa attctaggga gtggaagagg atacataggg agatggattg tgtggagaaa 3720 aaagaagagg gcacaggcca gcaaaggcag ctgagacaga gcccagggat gttggagaaa 3780 aaccaagaga acataatgag tgtaagtcaa ggaaaataga tttttttcaa ggagaaggga 3840 gaggccaatt gtggtgagta ccactaagcg gagggggaag tgagaacttg acagagaagc 3900 aagtgctggg tttgctggag ttgatatttg cagtcaatgg agtatccagg gaggaaactg 3960 gattggacca tttgaagagc gagtagaagt gaggacgagg ttaaggttga ctgttttgag 4020 tagaacttcc ggaaggactg tgctctgggt tcaggaagcc cgctgaatct aaaggaaaag 4080 gctaaagaag ctaaagagac agaggaggac ctgtgaacaa gagatgctca gtcattagca 4140 aggaaatact ggagatcccc tgtgtgcagt ggtgactact catgcaaaag gtcacacagc 4200 caatatttat tagtgacata gaatatacca gttattactc taggtcatga gaatggtgat 4260 aaataaaatg aatccgctcg ccatcagtat atgccatgta acagtttgca gtgactgtgt 4320 accaggcctg tgaatttctg tatgcaattt caataatgat cctgctgtat ctgtggtatt 4380 taaaaacata tacatctctg gaatctaaaa ttgagggatt ataagtaaaa cccagtatta 4440 gaaatttagt gctggaaatc agattgcagt ttaaatctga gcatatagaa agtccctttc 4500 ttctatgtca gcagatgcct tttatgtgag gcttaggtat actacattat tagacataaa 4560 ccagtgtttc tgccctatgt tttcagaatg acaattcttt atgaaactca tagaagaaca 4620 gaagacaatt gcaaaatcat gatgaagata ctaattgctt tagaattaag gaatacaaaa 4680 aataatgtga gttacagtta tagggatcat aaaagtgaaa atgggaatgt atttgagtgt 4740 ttattatgtg atcagtgcta agaagagtca tcatttaatt tgacacttaa cagtaatcct 4800 gtgaggatta tgctattatt aaatgcattt gatagattac aaaaaggctt actgttggca 4860 aaaattgacc caagtagaag aggtcacctt tttattcaga ttttctgatt gtagagtttg 4920 agagtttttc catcattagg gagtagtgac tatattgtgt ctgaattatt gacagaattt 4980 ctgatattca tatataccag gttgtttctt tgagtgggga cagagatgca agggctgcta 5040 gttccaatgt acaggagaaa cttttaatca ttttgcattt atcattttaa aagttcagta 5100 tgtctataat ggtcatgtgt tgacaaacac aaggaagtat taaatcactc ctccttctga 5160 ggtttgacta gcaaattggg caagagttac caaataaaat acatgttcct agttaaatct 5220 gaatttcaga tacacgacca taatttattg gaaatccaaa tttaattggg caccctctgg 5280 ttttatttgc caaatctgtc aactctaagt gagacacatg gacatggatt acagtgctac 5340 ccatgcaagc cacagtgaca gcaacttcac acatgtttac attttaactt tctctctgta 5400 agaaagtgct tagataattt ggtgataaaa agatagccat tgtttgatcc agggtggaca 5460 cctctctgcc atcgtttcta aagggcaaac ggagatttct gcaggtcttg ctcacagtct 5520 ggggacctgc tcatgttttg aaactgtctg tatcagaatg tcattttctt ggtttctccc 5580 tttctgaggg gacttgacta caaaaccaag agttctgcct ctggccaagg ctggaaatgt 5640 gatgcctgct agtattgttg ggagtgggag actgagagaa atgagttagt tggggcattt 5700 aacgggaata aaatagctgt ggttgtgatt cattactata gataattagt ggaccagtgg 5760 cggagaaatt aagaaaaaag atgatgtgaa cgataaatga tatgattagt gactgcttgg 5820 taaggcaagg aaatcattaa atcttggttc tcatcaagtt cattttctga aaagatagca 5880 ctgcattggg accagaattc tacaaaacat tctttttaca taggaccaag attttcaaga 5940 aatatttttc aatacaattc tcagctgctc cataactaat agtagcttgt tcaacacaga 6000 tttttttaga tggttcacac ctgtggttct tacccaggga tagttcacca cccctccctt 6060 ccctcccatc atccttgggg aacagtgaca atgtttggaa aaatttttgg ttgtcacaac 6120 aggggtttct tctgatattt aatgagtaga agccaggaac actgctagag aacctacaat 6180 gttcagaaca gcctccgcca tcaacaaaga attatctggt ccaaaatgtc aatagtgctg 6240 aggctgagag cactgcttca cactgtgctc tttctgaaaa ttctacactc acatctgtta 6300 tacactcacc acacagttca gtttttcata gtttattttt gcttcttcca ttataaaaaa 6360 ttagacagtt gcataaattt aaccactttc ttgttgaatc catttagtca atgcaagctc 6420 agtattttca tatttagttt ttgccttatg caatattttt caacattttc atgagttgtt 6480 ggtcatcacc atctctatta actttcaaca acttgctctt gtaagtcaca aatagtgatg 6540 ctgctgaaat tatttctcac taacatgcct cagatttctg tagtgattct acattttata 6600 ttattcacaa tgtaaaatgc ttctatgtac tcatttcact tttacccaag gattattttt 6660 aagttatttt tgtcatttac acacttcaaa cataaagaca aaaacatcaa aaatatatac 6720 tgtgttttac ataggtgtct attttcacac atatatgtat gtatgtttat atgtatggaa 6780 actacagaag cacatgtcgc caataagagc tctgagacac ctttgaccac ttacccttat 6840 cagatgagat ttgccaaatg agttgtggaa acaagttttt taaactgaat ttctgagctt 6900 tgtgaattta gaaatgcaaa ggaaagtttg tggacattta cagggatcat ggttttattg 6960 tcctttaaac tcttcgatac tttaccattg tcttactata aatccaaaat cctaacccca 7020 cccacgaggc tttaaatacc tggcttcttg tgatttctcc aggctaatct tttaccctcc 7080 ttcccctcag cctctctgct ttagtgaact ttctcctagt tttttgaaga agttcatcaa 7140 ttcaagcttt tgtagatggg atttcctaaa cctgaaatgt gcctcccgtt ttgtccaaac 7200 agacacgggc tccactctgc cccctggctc acacctgctt aacccgtcaa gtcacatctg 7260 aactgtcact ctttagaggg tccttctctg gcaccctaat gtaattgaga tcatcctatt 7320 attctctgct ctagaacttc ccacttccga gatttctcat tcctgtctaa cctcttgtgt 7380 gtttggtgtt tggccatcgc tttcactgct ctttaagctc ccccagcgga gtggagaggt 7440 ctgttttccc ttgtttggat tcctagaggc agcgcaggcc agacacaagg tcatcactaa 7500 gaaagtgttc acaggatgaa cgcggtgggt gctgtttaag gaaccggtaa acatgtggga 7560 tgagagaagg agcagagagt gtttttcggg tggaggctcc caggaggagg aggggcgggc 7620 tgcggtgctg ggcggatcct cctccagctc ctgcttggag gtctccagaa caagctggag 7680 gcagggatgg ggggtcccaa aagcctgggg atgagaaggg gtttccccgc atagtccccc 7740 aggcccccgt tcgcctcagg aaaacggagg atgagctcct gggctgctgg tggtgggcgt 7800 tgcggggggg gccggttaag gttcccagtg cccgcacccg gcccaggggg ccccggatgg 7860 cggcgtcgct gtcagtgtct tctcaggagg ccgcctgtgt gaccggagca ttcgtgtccc 7920 cacagcacgt ttcttggagc tgcttaagtc tgagtgtcat ttcttcaatg ggacggagcg 7980 ggtgcggttc ctggagagac acttccataa ccaggaggag tacgcgcgct tcgacagcga 8040 cgtgggggag taccgggcgg tgagggagct ggggcggcct gatgccgagt actggaacag 8100 ccagaaggac ctcctggagc agaagcgggg ccaggtggac aattactgca gacacaacta 8160 cggggttggt gagagcttca cagtgcagcg gcgaggtgag catgtcgggg ggcggggcct 8220 gggtccctgt gagctggaaa tctgagagtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg 8280 tgtgtgtgtg agagagagag agagagagag agagagagga agagagagac agagagaggg 8340 agcgcgccat ctgtgagcat ttagaatcct ctcaatcccg agcaagcagt tctgaaggca 8400 caggtgtgtg tgtagagtgt ggatttgtct gtgtctgtgt gcctgttgtg ggaggggaag 8460 caggaggggg ctgcttctta tccttggaga cttctgtgga gaggtgacaa gggaggtcgg 8520 tgcgggcggc tggagagaga ggagaccttg attgtcctgg gtccttagag atgcagggaa 8580 ggaaagtgta aggtgtgtgt gggtggggtg aaggtttagg ggaggagagc tgaggggtaa 8640 ggaaggtttg ggataatgtg aggaggccgg ttccagactg tccctggcac acacccttca 8700 tgtaatctct gaaataaaag tttgtgctgt ttgtaaaagc attagattaa gttctagggg 8760 aattgagtag acctctaagg cacctctgaa acttctttag gtataaattt cttgctagtt 8820 ttttgttttt ctagtgtgta tatttttaca tagtagaaat gacagtgaaa ctaacttttg 8880 aattaaagtt ttaacacaat tactgtatta ttataatgct aatagttttc tagtagttac 8940 atattattct tttatatata atagttgtga cacaacttag ggatcacttt cccctttgtt 9000 gacctttatt atgacattca ccaaaagttg aaaatgtatg tttctggtta atttttaatt 9060 tatatttttt catttgaaaa aatgtggaga ggtctgtttt tcattcaaaa gagttctttt 9120 gaattatttt gaccgattta ttggtcaatt ttaataactg ctctaagaat tccctatttt 9180 atttggtagg taatggacaa tgatctactg cctaatatct ctagggctta gtatttttct 9240 cagtgacttt gtgggttctt tgtactgtaa gattattaac actttattga tatttgattc 9300 agcatttgct ccagtttgtg gtttgtatgt tgattttgaa aattcttttc catgttaaga 9360 atttgaacat ttttatttaa taaaatgtat tgcaaaaatt ttattaatga tttacaatcc 9420 atcttaaatc tgccattttg tggtattttt gtctctaggt ttctccttac ttctaaaaac 9480 attgtattta ttgagagtat gctaatgtcg gggattttcc tgggcataag caccacaagt 9540 aatgagttcc agaccctgcc ttaatccaaa tgtgattctg gaaagaaaaa tcattttaca 9600 actggcctga taataattct gcttgtgttg cacgggggat acattgagca gctgaatgaa 9660 aatataagaa ctttcaaaac taaaatgacg ctcctaaatc cttctgtctg ctttaggact 9720 catgcttttc taggaacgta aaaatttgga gaatcatttc tgtctgtccc accttcccag 9780 gggcagaacc atttctgtgg tgttctaagg tgtgagtgca tggcagtagt attcctaaaa 9840 attcatactc ggttttctca tgtacccaac tctgtccctt tgtctatgta cattgcttta 9900 aatcatattt ttctgtcacg gagtacaagg atgataaata ggtgccaagt ggagcaccca 9960 agtgtgatga gcccccttac ggtggaatgg agtgagaagc tttctgatct cataaattga 10020 aggctatctt cagtcattat gtattttaca taaattaatc ctcatgtaac cccaagaggt 10080 aaattagtat aattatcctt cattgggggt gacaaagttg agacacagaa gaatcaactc 10140 ttccaggatc aaccagtaaa aggcagacct tggatttgaa ccaggcaacc tggctcagat 10200 atcagtttta attactgcac tctgtacttt caaaaatttg taaacacttt gacaatgcat 10260 gccaatttca agttatgaag aagcaaacgc aatttttcac atctctcaaa tctaatgggt 10320 cctcactatc aagattaaat tccaggctga tgacactgta aggccacatg gccagctgtg 10380 ctggaggcct ggtcaaggtc agagcctggg tttgcagaga agcagacaaa cagccaaacc 10440 agcagaatta ctctgtcttc ctgactcatt ccctctacct ttttttctcc tagtccatcc 10500 tcaggtgact gtgtatcctg caaagaccca gcccctgcag caccacaacc tcctggtctg 10560 ctctgtgagt ggtttctatc caggcagcat tgaagtcagg tggttccgga acggccagga 10620 agagaaggct ggggtggtgt ccacgggcct gatccagaat ggagactgga ccttccagac 10680 cctggtgatg ctagaaacag ttcctcggag tggagaggtt tacacctgcc aagtggagca 10740 cccaagcgta acgagccctc tcacagtgga atggagtgag cagctttctg atttcataca 10800 tttctcaccc accaagaagg ggactgtgct aatccctgag tgtcaggttt ctcctctccc 10860 acgtcctatt ttcatttgct ccatgttctc atctccatca gcacaggtca ctggggatag 10920 ccctgtaaca gtgtgtagaa acacctgtac tccctgtgga atcagtcatg cttttttttt 10980 ttgaacctcc ccatgatgtc acaggtcagg gtcacccgat ctccccaagc tccaggccct 11040 gcttctgggt ctgagactga gtttctggtg ctgctgctct gagttacttg ttttgatctg 11100 ggaagagggg aagcataggg gcctacctga catgagggga gtccaatctc agctctacct 11160 tttattagct ctgtcactct agacaaacta cttagcttca ttgagtctca ggctttctgt 11220 ggatcagatg ttgaactctt gccttacatc aaggctgtaa tatttgaatg agtttgatgt 11280 cggaaccttg taactgttca gtgtgatttg aaatcctttt tttctcccga aatggctagt 11340 tattttagtt cttgtggggc agccttcttc cccattttca aagctctgaa tcttagagtc 11400 tcaagtaaag aggttcaatc tggaataagc atcactaaac ctggcttcct ctctcaggtg 11460 cacggtctga atctgcacag agcaagatgc tgagtggagt cgggggcttt gtgctgggcc 11520 tgctcttcct tggggccggg ctgttcatct acttcaggaa tcagaaaggt aaggagtctt 11580 tggtagctgg ctctctccat aggcttttct ggaggaggaa ctatggcttt gctgaggtta 11640 gttctcagta tatgagtggc cctgaataaa gcctttcttt ccccaaacgg ctctaatgtc 11700 ctgctaatcc agaaatcatc agtgcatggt tactatgtga aagcataata gcttgtggcc 11760 tgcagagaca agaggaaggt taacaagtag gggtcctttg gtttgagatc ttggagcaaa 11820 ttaaggaaga gccactaaag ttaatggaat tacactggat cctgtgacag acacttcatg 11880 cttcatgggt cacatggtct gtttctgctc ctctctgccc tggttggtgt gggttttggt 11940 gttagaactc tccggtggga gatctgggac tgggatattg tgttggagga cagatttgct 12000 tcaatatctt ttaagtgtat atcttttcct ctttttccca ggacactctg gacttcagcc 12060 aacaggtaat accttttaat cctcttttag acacagattc agtttctcca gtgagaggtg 12120 aagccagctg gacttctggg ttgggtgggg acttggagaa cttttctgtc ttacaagagg 12180 tttctaaatg caccaatgag tgctctgtaa aaacacacca atgagtgctc tgtaaaaatt 12240 gacactctgt ggctcgctag atgtttgtaa gatggaccaa tcagcactct gtaaaatgga 12300 ccaatccaca ctctgtaaaa tggaccaatc agcactcttt aaaatggacc aatcagcagg 12360 atacgggcgg ggacaaataa gggaataaaa gctggtcacc ctagccagca ccggcaacct 12420 gcttaggtcc ttttctatgc tgtggaaggt ctgttctttc actcttcaca ataaatcttg 12480 tgctcactct ttgggtccgt gccaccttta agagctataa cactcactgc aagggtctgt 12540 ggcttcactc ttgaagtcag ccagaccctg aacctaccgg aaggaacaaa ctcaggacac 12600 actagaatga tggtagaggt gataaggcat gagacagaaa taataggaaa gactttggat 12660 ccaaatttct gatcaggcaa tttacaccaa aactcctcct ctccacttaa aaaaggcctg 12720 tgctctgcag gactattggc tctgggagac tcaggaactt gtttttcttc ttcctgcagt 12780 gttctcatct gagtccttca aagaggggga aagaaacgtt agtagagcca ggttgaaaac 12840 aacactctcc tctgtctttt gca 12863 // ID KX687292; SV 1; linear; genomic DNA; STD; HUM; 12882 BP. XX AC KX687292; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate DL12 MHC class II antigen (HLA-DRB3) gene, DE HLA-DRB3*03_01_01e1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-12882 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-12882 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 265ae288b2339b738f7c858779bfcf61. DR IMGT/HLA; HLA-DRB3*03:01:01:01; HLA00902. XX FH Key Location/Qualifiers FH FT source 1..12882 FT /organism="Homo sapiens" FT /isolate="DL12" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <174..>12084 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*03_01_01e1" FT mRNA join(<174..273,7961..8230,10511..10792,11475..11585, FT 12061..>12084) FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*03_01_01e1" FT /product="MHC class II antigen" FT CDS join(174..273,7961..8230,10511..10792,11475..11585, FT 12061..>12084) FT /codon_start=1 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*03_01_01e1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1D5" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1D5" FT /protein_id="AST15805.1" FT /translation="MVCLKLPGGSSLAALTVTLMVLSSRLAFAGDTRPRFLELLKSECH FT FFNGTERVRFLERYFHNQEEFVRFDSDVGEYRAVTELGRPVAESWNSQKDLLEQKRGQV FT DNYCRHNYGVVESFTVQRRVHPQVTVYPAKTQPLQHHNLLVCSVSGFYPGSIEVRWFRN FT GQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRARSE FT SAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPT" XX SQ Sequence 12882 BP; 3473 A; 2541 C; 2965 G; 3903 T; 0 other; gctgttgaac tcagatgctg attggttctc cgacacgaga ttacccaatc caggagcaag 60 gaaatcagta acttcctccc tataatttgg aatgtgggtg gaggggggtc atagttctcc 120 ctgagtgaga cttgcctgct cctctggccc ctggtcctgt cctcttctcc agcatggtgt 180 gtctgaagct ccctggaggc tccagcttgg cagcgttgac agtgacactg atggtgctga 240 gctcccgact ggctttcgct ggggacaccc gacgtaagag cacattgagg gtgctgagct 300 actatggggt gggggaatat agggagttgt gttaacattg tgcccaggcc atgtccctta 360 agaaattgtg aggttttctt cagagattgc tcatctttat caagggatcg caaattattt 420 cctccacaaa aggaacttgg ctacttgccc tctccatgag acttgtgtaa ggggcctttg 480 tacaggccat ttcttctcaa atctccacca ataaaacctt tgcatcacat gtactcaggg 540 tctttagagg atttggaaat aaggatgcta aaataaattc cccatacagc aattcccttt 600 attatgttga cttatgtcag acaaaaggag gtttttactg aaaattttgt gggagtcaag 660 ggaattcaaa gggtctctcc tagacgatcc tgggttatgt cctccacagg acctgtggtg 720 ttggcccctc ttcctcatat gtgaggatgg acccagtggc ctccctagta tctcctttct 780 tttctttctg aactccaatg tttataaagc ctgtatccct gtagtgtatg taggttgtct 840 gacagaagtt atacttagtg ctctttcttt cttttgggga aaaatccctg gaactgaagc 900 tgagatcatt agtacttgga atcaccttac agatacagag cacttatgag gtattctttg 960 gtgcctaaag aacttaaggc atcctctgaa aaactggccc aggttagtgt ttattatgaa 1020 tctttttaac ctttctatac ttgtttctcc tacatctcct acatgctcta actagacatg 1080 acagaagaga tttaactaat gtagtataaa ttatatgaaa ttctattttt gtaagtcaaa 1140 aataatcaaa tatcagaaat ttaataatgt tcaaactata tactgtgtgg ggttaccgag 1200 acaatgtgga cattgttcac atctcatagg gctgaaagtc aatgggcaag tcctggaaac 1260 tcattgtctt actgcggtct tgtcctcagt ttcataggtt cacccatcat gccctcagct 1320 ttccttaatt agccatgtct gcttacctct tcctcccatt tctctctatt tttccccaac 1380 tatgttgtca tcatttccag aaatctctaa agcttgcaca gatccttagc actatgagat 1440 ccattgaaag agataatatt tttctctttg agatagggcc tggctctgtc acccaggctg 1500 tagctcagtg gtgcgatcga ggctcactgc aacctctgcc tcccacactc aagcaatcct 1560 ccctcctcag gctccagagt agctgggaat acaggcaggc aaccacgccc agctaatttt 1620 tgcaattttg gtagagagga gattttgcca tattgcccag gctggtctta aactgctgaa 1680 ctcaagcaat cctcctgcct tagcctccca acatgctagg attatagatg tgagccagtg 1740 tgcccaggca aaagagatga ctcttaataa aaagatttcc tttttcttaa atcactgttc 1800 ctttatccgt gaattcttct tccaactaga agaaggagaa agaagtttgc ctgtatttct 1860 caccaggagg agaaggggtc tagtgtgaca tcaaaatgaa agagtgctgg aacttgagcc 1920 ccttcttgct ttccaggatc cccacagtga tcagttccca taccctggtt tatttgtgta 1980 aaccacactt atttttctca gcagctactg tgtactgggt tccattctag gttcaaatca 2040 ttctatttga ttaagataga gagggtcccg actctcaagg aagttacaag agtggaggag 2100 acagacacta acccaataag catttaacaa agaagataat gttagagagt catagtgcac 2160 tgaagaaaag acatcagatg tgtgttgaaa gagagaaatg gattcatcta ctttagtttg 2220 tatgtttagg gagctctacc tgagaaagtg atattcagct gagacaacaa aataagtaga 2280 cagtcatgaa gatctaacgg acgaaagttt cagggagacc gaatcgaggg aaagcactgg 2340 tgtgggaaat tatgtggagg gagagaaaga aggctagaaa ggctgacgta tagaaagcaa 2400 ggaaatggag aggcagaaga tgaggtagga cacagagagg aagtcaggag cctcatcatt 2460 ataggctctg atgtccacgg taaaaaattt gaattttatt ttatttttat ttatttttaa 2520 attttattta tttatttatt ttgagatgga gtttcattct tgttgcccag gctggagtgc 2580 catggcgcaa tctccactca ctgcaacctc cacctcctgg gttcaagtga ttttcctgcc 2640 tcagcttccc aagtaactgg gattacaggc acccaccacc atacctggct aatttttttg 2700 tatttttagt atacatgggg tatcaccatg ttgaccaggc tggtcttgaa ctcctgacct 2760 cagataatct gtctgccttg gcctcccaaa gtgctgggat tacaggcgtg agccaccacc 2820 cccggactga attttattta aatagatatg agaagctgct gtatggttac aaggagagtc 2880 aatttatatt caacttttgt gtgtgtgtgt gatggagtct cactctgttg cccaggctag 2940 attgcagtgg cacaatctcg gctcactgca acctccgcct cccgggttca agaaattatc 3000 cttcctcagc ctcctgagta gctgggacca caggtgcatg ccaccacagt cggctacttt 3060 ttgtattttt agtagggatg gggtttcacc gtgttagcca agatggtctc gatctcctga 3120 ccttgtgatc caccagcctc ggcctcccaa agtgctggga ttacaggcat gagccactgc 3180 gcccagctta tattcaatta ttacaattaa ttctagctac tttgtgggga ttggattgtt 3240 ggggttcaca agtggttagg aggactattt aggagcacag cagggaattc tccagggaaa 3300 acaggcttgt ggcttcatgg agtgcattag tgataaagac ggtgaaaaag ataaagtgga 3360 cagacttggc atgtattttt gcttagcttg ttaatgaatt actgtaaagg gggtggaaca 3420 atcaagttta ttcctgagga ttttgttttg acaaataagt gggtggtagt tttgtttatt 3480 gagataggaa aaactgtggg aggaaatgat ttgaagtggg tggttggaaa taaaagtttt 3540 gtttaaatta gagatgattt attgacattt atgtagagca atcagaaggt cagtggcatt 3600 taagagactc atggtgaggt gaggctaggg cttcagatat ttatgttggc ggcatcaata 3660 cgtgtagtgt gttaaattct agggagtgga agaggataca tagggagatg gattgtgtgg 3720 agaaaaaaga acagggcaca ggccagcaaa gtgggctgag acagagccca gggatgttgg 3780 agaaaaacca agagaacata atgcgtgtaa gtcaaggaaa atatattttt ttcagggaga 3840 agggagaggc caattgtggt gagtaccact aagcagaggg ggaagtgaga acgtgacaga 3900 gaagcaagtg ctgggtttgg tggagttgat atttgtagtc aatggagtat ccagggagga 3960 aactggattg gactatttga agagtgagta gaagtgagga cgaggttaag gttgactgtt 4020 ttgagtagaa cttcgggaag gactgtgctc tgggttcagg gagcccgctg aatctaaagg 4080 aaaaggctaa agaagctaaa gagacggagg aagacctgtg aacaagagat gctcagtcat 4140 tagcaaggaa atactggaga gcccctgtgt gcagtggtga ctactcatgc aaaaggtcac 4200 acagccaata tttaacacag ccagtatttc acagagccaa tatttattag tgacatagaa 4260 tataccagtt attactctag gtcatgagag tggtgataaa taaaatgaat ccgctcgcca 4320 tcagtatatg ccatgtaaca gtttgcagtg actgtgtacc aggcctgtga atttctgtat 4380 gcaatttcaa taatgatcct gctgtatctg tggtatttaa aaacatatac atctctggaa 4440 tctaaaattg agaggttata agtaaaaccc agtattagaa atttagtgct ggaaatcaga 4500 ttgcagttta aatctgagca tatagaaagt ccctttcttc tatgtcagca gatgcctttt 4560 atgtgaggtt taggtatact acattattag acataaacca gtgtttctgc cctatgtttt 4620 cagaatgaca attctttatg aaactcatag aagaacagaa gacaattgca aaatcatgaa 4680 gatactaatt gctttagaat taaggaatac aaaaaataat gtgagctaca gttataggga 4740 tcataaaagt taaaatggga atgtatttga gtgtttatta tgtgatcagt gctaagaaga 4800 gtcatcattt aattttacac ttaacagtaa tcctgtgagg attatgctat tattaaatgc 4860 atttgatata ttacaaaaag gcttacggtt ggtaaaaatt gacccaagta gaagaggtca 4920 cctttttatt cagattttct gattgtaggg tttgagagtt tttccatcat tagtgagtag 4980 tgactatatt gtgtctgaat tattgacaga atttctgata ttcatatata ccaggttgtt 5040 tctttgagtg gggacagaga tgcaagggct gctaattcca atgtatagga gaaactttca 5100 atgattttgc atttatcatt ttaaaagttc agtatgtcta taatggtcat gcgttgacaa 5160 acacaaggaa gtattaaatc actccttctt ctgaggtttg actagcaaat tgggcaagag 5220 ttaccaaata aaacacatgt tcctagttaa atctaaattt cagatacacg accataattt 5280 attggaaatc caaatttaat tgggtaccct ctggttttat ttgccaaatc tgtcaaccct 5340 aagtgggaca catggacatg gattacagtg ctacccatgc aagccacagt gacagcaact 5400 ttacacatgt ttacatttta actttctctc tgtaagaaag tgcttagata atctagggat 5460 aaaaagatag acattgtttg atccagggtg gacacctctc tgccatcgtt tctaaagggc 5520 aaagggagat ttctgcaggt cttgctcaca gtctggggac ctgctcatgt tttgaaactg 5580 tctgtatcag aatgtcattt tcttggtttc tccctttctg aggggacttg actacaaaac 5640 caagagttct gcctctggcc aaggctggaa atgtgatgcc tgctagcatt gttgggagtg 5700 ggagactgag agaaatgagt tagttggggc atttaatggg aataaaatag ctgtggttgt 5760 gattcattac tatagataat tagtggacca gtggcagaga aattaagaaa aaagatgatg 5820 tgaatgataa atgatatgat tagtgactgc ttggtaaggc aagtaaatca ttaaatcttg 5880 gttctcatca agttcatttt ctgaaaagat agcactgtat tgggaccaga attctacaaa 5940 acattctttt tacctaagac caagattttc aagaaatatt tttcaataca attctcagct 6000 gctccataac taatagtagc ttgttcaaca cagatttttt cagatggttc acacctgtag 6060 ttcttaccca gggatagttc accacccctc ccttccctcc catcatcctt ggggaacagt 6120 gacaatgttt ggaacaattt ttggttgtca caacaggggt ttcttctgat atttaatgag 6180 tagaagccag gaacactgct agagaaccta caatgttcag aacagcctcc gccatcaaca 6240 aagaattatc tggtccaaaa tgtcaatagt gctgaggctg agagcactgg ttcacgctgt 6300 gctctttttg aaaattctac actcacatct gttatacact caccacacag ttcagttttt 6360 tatagtttat ttttgcttgt tccattataa aaaaattaga cagttgcata aattcaacca 6420 ctttcttgtt gaatccactt agtcaatgca agcttaatat tttcatattt agtttttgcc 6480 ttatgcaata tttttcaaca ttttcatgag ttgttggtca tcaccatctc tattaacttc 6540 caacaacttg ctcttgtaag tcacaaatag tgatgctgct gaaattattt ctcagtaaca 6600 tgcctcagat ttctgtagtg attctacatt ttatattatt cacaatgtaa aatgcttcta 6660 tgtactcatt tcacttttac ccaaggatta tttttaagtt atttttgtcg ttttcacact 6720 tcaaacataa agacaaaaac atcaaaaata tatattgtgt tttacatatg tgtctatttt 6780 cacacatata tgtatgtatg tttatatgta tggaaactac agaagcacat gtcgccaata 6840 agagctctga gacacctttg accacttacc cttatcagat gagatttgcc aaatgagttg 6900 tggaaacaag ttttttaaac tgaatttctg agctttgtga atttagaaat gcaaaggaaa 6960 gtttgtggac atttacaggg atcatggttt tattgtcctt taaactcttc gatactttac 7020 cattgtctta ctataaatcc aaaatcctaa cgccacccac gaggctttca atacctggct 7080 tcttgtgatt tctccaggct aaccttttac cctccttccc ctcagcctct ctgctttagt 7140 gaactttctc ctagtttttt gaagaagttc atcaattcaa gcttttgtac atgggatttc 7200 ctaaacctga aatgtgcctc ccgttttgtc caaacagaca caggctccac tctgccccct 7260 ggctcacacc tgcttaacct gtcaagtcac atctgaactg tcactcttca gagggtcctt 7320 ctctggcacc ctaatgtaat tgagatcatc ctattattct ctgctctaga acttcccact 7380 tccgagattt ctcattcctg tctaacctct tgtgtgtctg gtttttggcc atcgctttca 7440 ctgctcttta agctccccca gcggagtgga gaggtctgtt ttccctcgtt tggattccta 7500 gaggcagcgc agaccaggca caaggtcagc actaaggaag tgttcacagg atgaacgcgg 7560 tgggtgctgt ttaaggaacc ggtaaacgtg tgggatgaga gaaggagcag agagtgtctt 7620 tggggtggag gctcccagga ggaggcgggg cgggctgcgg tgctgggcgg atcctcctcc 7680 agctcctgct tggaggtctc cagaacaagc tggaggcagg gatggggggt cccaaaagcc 7740 tggggatgag aaggggtttt cccgcatagt cccccaggcc cccgttcgcc tcaggaaaac 7800 ggaggatgag ctcctgggct gctggtggtg ggcgttgcgg gtggggcccg ttaaggttcc 7860 cagtgcccgc accccaccca gggagccccg gatggtggcg tcactgtcag tgtcttctca 7920 ggaggccgcc tgtgtgaccg gagcattcgt gtccccacag cacgtttctt ggagctgctt 7980 aagtctgagt gtcatttctt caatgggacg gagcgggtgc ggttcctgga gagatacttc 8040 cataaccagg aggagttcgt gcgcttcgac agcgacgtgg gggagtaccg ggcggtgacg 8100 gagctggggc ggcctgtcgc cgagtcctgg aacagccaga aggacctcct ggagcagaag 8160 cggggccagg tggacaatta ctgcagacac aactacgggg ttgtggagag cttcacagtg 8220 cagcggcgag gtgagcatgt cagggggcgg ggcctgggtc cctgtgagct ggaaatctga 8280 gagtgtgtgt gtgtgtatgt gtgtatgtgt gtgtgtgaga gagagagaca gagaggaaga 8340 gagagacaga gagagggagc gcgccatctg tgagcattta gaatcctctc aatcccgagc 8400 aagcagttct gaaggcacag gtgtgtgtgt agagtgtgga tttgtctgtg tctgtgtgcc 8460 tgttgtggga ggggaagcag aagggggctg cttcttatcc ttggagactt ctgtggagag 8520 gtgaaaaggg aggtgggtgc gggcggctgg agagagagga gaccttgatt gtcctgggtc 8580 cttagagatg cagggaagga aagtgtaagg tgtgtgtggg tggggtgaag gtttagggga 8640 ggagagctga ggggtaagga aggtttggga taatgtgagg aggccggttc cagactgtcc 8700 ctggcacaca cccttcatgt aatctctgaa ataaaagtgc gtgctgtttg taaaagcatt 8760 agattaagtt ctaggggaat tgagtagacc tctaaggcac ctctgaaact tctttaggta 8820 taaatttctt gctagttttt tgttttttta gtgtgtatat ttttacatag tagaaatgac 8880 agtgaaacta acttttgaat taaagtttta acacagttac tgtattatta taatgctaat 8940 agttttctag tagttacata ttattctttt atatataata gttgtgacac aacttaggga 9000 tcactttccc ctttgttgac ctttattatg acattcacca aaagttgaaa atgtatgttt 9060 ctggttaatt tttaatttat attttttcat ttgaaaaaat gtggagaggt ctgtttttca 9120 ttcaaaagag ttcttttgaa ttattttgac cgatttattg gtcaatttta ataactgctc 9180 taagaattcc ctattttatt tggtaggtaa tggacaatga tctactgcct aatatctcta 9240 gggcttagta tttttctcag tgactttgtg ggttctttgt actgtaagat tattaacact 9300 ttattgatat ttgattcagc atttgctcca gtttgtggtt tttatgttga ttttgaaaat 9360 tcttttccat gttaagaatt tgaacatttt tatttaataa aatgtattgc aaaaatttta 9420 ttaatgattt acaatccatc ttaaatctgc cattttgtgg tatttttgtc tctaggtttc 9480 tccttacttc taaaaacatt gtatttattg agagtatgct aatgtcgggg attttcctgg 9540 gcataagcat cacaagtaat gagttccaga ccctgcctta atccaaatgt gattctggaa 9600 agaaaaatca ttttacaatt ggcctgataa taattctgct tgtgttgcac gggggataca 9660 ttgagcagct gaatgaaaat ataagaactt tcaaaactaa aatgacgctc ctaaatcctt 9720 ctgtctgctt taggactcat gcttttctag gaacgtaaaa atttggagaa tcatttctgt 9780 ctgtcccacc ttcccagggg cagaaccatt tctgtggtgt tctaaggtgt gagtgcatgg 9840 cagcagtatt cctaaaaatt catactctgt tttctcatgt acccaactct gtccctttgt 9900 ctatgtacat tgctttaaat catatttttc tgtcacggtg tacaaggatg ataaataggt 9960 gccaagtgga gcacccaagt gtgatgagcc cccttatggt ggaatggagc gagaagcttt 10020 ctgacctcat aaattgaagg ctatcttcac tcattatgta ttttacgtaa attaatcctc 10080 atataacccc aagaggtaaa ttagtataat tatccttcat tgggggtgac aaagttgaga 10140 cacagaagaa tcaactcttc caggatcaac cagtaaaagg cagaccttgg atttgaacca 10200 tgcaacctgg ctcagatatc agttttaatt actacactct gtactttcaa aaatttgtaa 10260 acactttgac aatgcatgcc aatttcaagc tatgaagaag caaacgcaat ttttcacatc 10320 tctcaaatct aatgggtcct cactatcaag attaaattcc aggctgatga cactgtaagg 10380 ccacatggcc agctgtgctg gaggcctgtt caaggtcaga gcctgggttt gcagagaagc 10440 agacaaacac caaaaccagg agaattactc tgtcttcctg actcattccc tctacctttt 10500 tttctactag tccatcctca ggtgactgtg tatcctgcaa agacccagcc cctgcagcac 10560 cacaacctcc tggtctgttc tgtgagtggt ttctatccag gcagcattga agtcaggtgg 10620 ttccggaatg gccaggaaga gaagactggg gtggtgtcca caggcctgat ccataatgga 10680 gactggacct tccagaccct ggtgatgcta gaaacagttc ctcggagtgg agaggtttac 10740 acttgccaag tggagcaccc aagcgtaaca agccctctca cagtggaatg gagtgagcag 10800 ctttctgatt tcatacattt ctcacccacc aagaagggga ctgtgctaat ccctgagtgt 10860 caggtttctc ctctcccacg tcctattttc atttgttcca tgttctcatc tccatcagca 10920 caggtcactg gggatagccc tgtaacagtg tgtagaaaca cctgtacccc ctgtggaatc 10980 agtcatgctt tttttttttg aacctcccca tgatgtcaca ggtcagggtc acccgctctc 11040 cccaagctcc aggccctgct tttgggtctg agactgagtt tctggtgctg ctgctctgag 11100 ttacttgttt tgatccggga agaggggaag cataggggcc tacctgacat gaggggagtc 11160 taatctcagc tctacctttt attagctctg tcactctaga caaactactt agcttcattg 11220 agtctcaggc tttctgttga tcagatgttg aacgcttgcc ttacatcaat gctgtaatat 11280 ttgaatgagt ttgatgtcgg aaccttgtaa ctgttcagtg tgatttgaaa tccttttttt 11340 ctcccgaaat ggctagttat tttagttctt gtggggcagc cttcttcccc attttcaaag 11400 ctctgaatct tagagtctca attaaagagg ttcaatttgg aataaacgtc actaaacctg 11460 gcttcctctc tcaggagcac ggtctgaatc tgcacagagc aagatgctga gtggagtcgg 11520 gggctttgtg ctgggcctgc tcttccttgg ggccgggctg ttcatctact tcaggaatca 11580 gaaaggtaag gagtctttgg tagctggctc tctccgtagg cttttctgga ggaggaacta 11640 tagctttgct gaggttagtt ctcagtatat gagtggccct gaataaagcc tttctttccc 11700 caaacggctc taatgtcctg ctaatccaga aatcatcagt gcatggttac tatgtgaaag 11760 cataatagct tgtggcctgc agagacaaga ggaaggttaa caagtagggg tcctttggtt 11820 tgagatcttg gagcaaatta aggaagagcc actaaagtta atggaattac actggatcct 11880 gtgacagaca cttcatgctt catgggtcac atggtctgtt tctgctcctc tctgccctgg 11940 ttggtgtggg ttttggtgtt agagaactct ccggtgggag atctgggact gggatattgt 12000 gttggaggac agatttgctt caatatcttt taagtgtata tcttttcctc tttttcccag 12060 gacactctgg acttcagcca acaggtaata ccttttaatc ctcttttaga cacagattca 12120 gtttctctag tgagaggtga agccagctgg acttctgggt tgggtgggga cttggagaac 12180 ttttctgtct tacaagaggt ttctaaatgc accaatgagt gctctgtaaa aacacaccaa 12240 tgagtgctct gtaaaaattg acactctgtg gcttgctaga tgtttgtaag atggaccaat 12300 cagcactctg taaaatggac caatccacac tctgtaaaat ggaccaatca gcactcttta 12360 aaatggacca atcagcagga tacgggtggg gacaaataag ggaataaaag ctggtcaccc 12420 tagccagcac cggcaacctg cttaggtcct tttctatgct gtggaaggtc tgttctttca 12480 ctcttcacaa taaatcttgt gctcactctt tgggtccgtg ccacctttaa gagctataac 12540 actcactgca agggtctgtg gcttcactct tgaagtcagc cagaccgtga acccaccgga 12600 aggaacaaac tctggacaca ctagaatggt ggtagaggtg ataaggcatg agacagaaat 12660 aataggaaag actttggatc caaatttctg atcaggcaat ttacaccaaa actcctcctc 12720 tccacttaga aaaggcctgt gctctgcagg actattggct ctgggagact caggaacttg 12780 tttttcttct tcctgcagtg ttctcatctg agtccttcaa agagggggaa agaaacgtta 12840 gtagagccag gttgaaaaca acactctcct ctgtcttttg ca 12882 // ID KX687293; SV 1; linear; genomic DNA; STD; HUM; 12883 BP. XX AC KX687293; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate DL4 MHC class II antigen (HLA-DRB3) gene, DE HLA-DRB3*03_01_01e2 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-12883 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-12883 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; df65fd9a1c3dd5593203b3d43d20b1fc. DR IMGT/HLA; HLA-DRB3*03:01:01:01; HLA00902. XX FH Key Location/Qualifiers FH FT source 1..12883 FT /organism="Homo sapiens" FT /isolate="DL4" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <174..>12085 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*03_01_01e2" FT mRNA join(<174..273,7961..8230,10511..10792,11476..11586, FT 12062..>12085) FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*03_01_01e2" FT /product="MHC class II antigen" FT CDS join(174..273,7961..8230,10511..10792,11476..11586, FT 12062..>12085) FT /codon_start=1 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*03_01_01e2" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1D3" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1D3" FT /protein_id="AST15806.1" FT /translation="MVCLKLPGGSSLAALTVTLMVLSSRLAFAGDTRPRFLELLKSECH FT FFNGTERVRFLERYFHNQEEFVRFDSDVGEYRAVTELGRPVAESWNSQKDLLEQKRGQV FT DNYCRHNYGVVESFTVQRRVHPQVTVYPAKTQPLQHHNLLVCSVSGFYPGSIEVRWFRN FT GQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRARSE FT SAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPT" XX SQ Sequence 12883 BP; 3474 A; 2541 C; 2964 G; 3904 T; 0 other; gctgttgaac tcagatgctg attggttctc cgacacgaga ttacccaatc caggagcaag 60 gaaatcagta acttcctccc tataatttgg aatgtgggtg gaggggggtc atagttctcc 120 ctgagtgaga cttgcctgct cctctggccc ctggtcctgt cctcttctcc agcatggtgt 180 gtctgaagct ccctggaggc tccagcttgg cagcgttgac agtgacactg atggtgctga 240 gctcccgact ggctttcgct ggggacaccc gacgtaagag cacattgagg gtgctgagct 300 actatggggt gggggaatat agggagttgt gttaacattg tgcccaggcc atgtccctta 360 agaaattgtg aggttttctt cagagattgc tcatctttat caagggatcg caaattattt 420 cctccacaaa aggaacttgg ctacttgccc tctccatgag acttgtgtaa ggggcctttg 480 tacaggccat ttcttctcaa atctccacca ataaaacctt tgcatcacat gtactcaggg 540 tctttagagg atttggaaat aaggatgcta aaataaattc cccatacagc aattcccttt 600 attatgttga cttatgtcag acaaaaggag gtttttactg aaaattttgt gggagtcaag 660 ggaattcaaa gggtctctcc tagacgatcc tgggttatgt cctccacagg acctgtggtg 720 ttggcccctc ttcctcatat gtgaggatgg acccagtggc ctccctagta tctcctttct 780 tttctttctg aactccaatg tttataaagc ctgtatccct gtagtgtatg taggttgtct 840 gacagaagtt atacttagtg ctctttcttt cttttgggga aaaatccctg gaactgaagc 900 tgagatcatt agtacttgga atcaccttac agatacagag cacttatgag gtattctttg 960 gtgcctaaag aacttaaggc atcctctgaa aaactggccc aggttagtgt ttattatgaa 1020 tctttttaac ctttctatac ttgtttctcc tacatctcct acatgctcta actagacatg 1080 acagaagaga tttaactaat gtagtataaa ttatatgaaa ttctattttt gtaagtcaaa 1140 aataatcaaa tatcagaaat ttaataatgt tcaaactata tactgtgtgg ggttaccgag 1200 acaatgtgga cattgttcac atctcatagg gctgaaagtc aatgggcaag tcctggaaac 1260 tcattgtctt actgcggtct tgtcctcagt ttcataggtt cacccatcat gccctcagct 1320 ttccttaatt agccatgtct gcttacctct tcctcccatt tctctctatt tttccccaac 1380 tatgttgtca tcatttccag aaatctctaa agcttgcaca gatccttagc actatgagat 1440 ccattgaaag agataatatt tttctctttg agatagggcc tggctctgtc acccaggctg 1500 tagctcagtg gtgcgatcga ggctcactgc aacctctgcc tcccacactc aagcaatcct 1560 ccctcctcag gctccagagt agctgggaat acaggcaggc aaccacgccc agctaatttt 1620 tgcaattttg gtagagagga gattttgcca tattgcccag gctggtctta aactgctgaa 1680 ctcaagcaat cctcctgcct tagcctccca acatgctagg attatagatg tgagccagtg 1740 tgcccaggca aaagagatga ctcttaataa aaagatttcc tttttcttaa atcactgttc 1800 ctttatccgt gaattcttct tccaactaga agaaggagaa agaagtttgc ctgtatttct 1860 caccaggagg agaaggggtc tagtgtgaca tcaaaatgaa agagtgctgg aacttgagcc 1920 ccttcttgct ttccaggatc cccacagtga tcagttccca taccctggtt tatttgtgta 1980 aaccacactt atttttctca gcagctactg tgtactgggt tccattctag gttcaaatca 2040 ttctatttga ttaagataga gagggtcccg actctcaagg aagttacaag agtggaggag 2100 acagacacta acccaataag catttaacaa agaagataat gttagagagt catagtgcac 2160 tgaagaaaag acatcagatg tgtgttgaaa gagagaaatg gattcatcta ctttagtttg 2220 tatgtttagg gagctctacc tgagaaagtg atattcagct gagacaacaa aataagtaga 2280 cagtcatgaa gatctaacgg acgaaagttt cagggagacc gaatcgaggg aaagcactgg 2340 tgtgggaaat tatgtggagg gagagaaaga aggctagaaa ggctgacgta tagaaagcaa 2400 ggaaatggag aggcagaaga tgaggtagga cacagagagg aagtcaggag cctcatcatt 2460 ataggctctg atgtccacgg taaaaaattt gaattttatt ttatttttat ttatttttaa 2520 attttattta tttatttatt ttgagatgga gtttcattct tgttgcccag gctggagtgc 2580 catggcgcaa tctccactca ctgcaacctc cacctcctgg gttcaagtga ttttcctgcc 2640 tcagcttccc aagtaactgg gattacaggc acccaccacc atacctggct aatttttttg 2700 tatttttagt atacatgggg tatcaccatg ttgaccaggc tggtcttgaa ctcctgacct 2760 cagataatct gtctgccttg gcctcccaaa gtgctgggat tacaggcgtg agccaccacc 2820 cccggactga attttattta aatagatatg agaagctgct gtatggttac aaggagagtc 2880 aatttatatt caacttttgt gtgtgtgtgt gatggagtct cactctgttg cccaggctag 2940 attgcagtgg cacaatctcg gctcactgca acctccgcct cccgggttca agaaattatc 3000 cttcctcagc ctcctgagta gctgggacca caggtgcatg ccaccacagt cggctacttt 3060 ttgtattttt agtagggatg gggtttcacc gtgttagcca agatggtctc gatctcctga 3120 ccttgtgatc caccagcctc ggcctcccaa agtgctggga ttacaggcat gagccactgc 3180 gcccagctta tattcaatta ttacaattaa ttctagctac tttgtgggga ttggattgtt 3240 ggggttcaca agtggttagg aggactattt aggagcacag cagggaattc tccagggaaa 3300 acaggcttgt ggcttcatgg agtgcattag tgataaagac ggtgaaaaag ataaagtgga 3360 cagacttggc atgtattttt gcttagcttg ttaatgaatt actgtaaagg gggtggaaca 3420 atcaagttta ttcctgagga ttttgttttg acaaataagt gggtggtagt tttgtttatt 3480 gagataggaa aaactgtggg aggaaatgat ttgaagtggg tggttggaaa taaaagtttt 3540 gtttaaatta gagatgattt attgacattt atgtagagca atcagaaggt cagtggcatt 3600 taagagactc atggtgaggt gaggctaggg cttcagatat ttatgttggc ggcatcaata 3660 cgtgtagtgt gttaaattct agggagtgga agaggataca tagggagatg gattgtgtgg 3720 agaaaaaaga acagggcaca ggccagcaaa gtgggctgag acagagccca gggatgttgg 3780 agaaaaacca agagaacata atgcgtgtaa gtcaaggaaa atatattttt ttcagggaga 3840 agggagaggc caattgtggt gagtaccact aagcagaggg ggaagtgaga acgtgacaga 3900 gaagcaagtg ctgggtttgg tggagttgat atttgtagtc aatggagtat ccagggagga 3960 aactggattg gactatttga agagtgagta gaagtgagga cgaggttaag gttgactgtt 4020 ttgagtagaa cttcgggaag gactgtgctc tgggttcagg gagcccgctg aatctaaagg 4080 aaaaggctaa agaagctaaa gagacggagg aagacctgtg aacaagagat gctcagtcat 4140 tagcaaggaa atactggaga gcccctgtgt gcagtggtga ctactcatgc aaaaggtcac 4200 acagccaata tttaacacag ccagtatttc acagagccaa tatttattag tgacatagaa 4260 tataccagtt attactctag gtcatgagag tggtgataaa taaaatgaat ccgctcgcca 4320 tcagtatatg ccatgtaaca gtttgcagtg actgtgtacc aggcctgtga atttctgtat 4380 gcaatttcaa taatgatcct gctgtatctg tggtatttaa aaacatatac atctctggaa 4440 tctaaaattg agaggttata agtaaaaccc agtattagaa atttagtgct ggaaatcaga 4500 ttgcagttta aatctgagca tatagaaagt ccctttcttc tatgtcagca gatgcctttt 4560 atgtgaggtt taggtatact acattattag acataaacca gtgtttctgc cctatgtttt 4620 cagaatgaca attctttatg aaactcatag aagaacagaa gacaattgca aaatcatgaa 4680 gatactaatt gctttagaat taaggaatac aaaaaataat gtgagctaca gttataggga 4740 tcataaaagt taaaatggga atgtatttga gtgtttatta tgtgatcagt gctaagaaga 4800 gtcatcattt aattttacac ttaacagtaa tcctgtgagg attatgctat tattaaatgc 4860 atttgatata ttacaaaaag gcttacggtt ggtaaaaatt gacccaagta gaagaggtca 4920 cctttttatt cagattttct gattgtaggg tttgagagtt tttccatcat tagtgagtag 4980 tgactatatt gtgtctgaat tattgacaga atttctgata ttcatatata ccaggttgtt 5040 tctttgagtg gggacagaga tgcaagggct gctaattcca atgtatagga gaaactttca 5100 atgattttgc atttatcatt ttaaaagttc agtatgtcta taatggtcat gcattgacaa 5160 acacaaggaa gtattaaatc actccttctt ctgaggtttg actagcaaat tgggcaagag 5220 ttaccaaata aaacacatgt tcctagttaa atctaaattt cagatacacg accataattt 5280 attggaaatc caaatttaat tgggtaccct ctggttttat ttgccaaatc tgtcaaccct 5340 aagtgggaca catggacatg gattacagtg ctacccatgc aagccacagt gacagcaact 5400 ttacacatgt ttacatttta actttctctc tgtaagaaag tgcttagata atctagggat 5460 aaaaagatag acattgtttg atccagggtg gacacctctc tgccatcgtt tctaaagggc 5520 aaagggagat ttctgcaggt cttgctcaca gtctggggac ctgctcatgt tttgaaactg 5580 tctgtatcag aatgtcattt tcttggtttc tccctttctg aggggacttg actacaaaac 5640 caagagttct gcctctggcc aaggctggaa atgtgatgcc tgctagcatt gttgggagtg 5700 ggagactgag agaaatgagt tagttggggc atttaatggg aataaaatag ctgtggttgt 5760 gattcattac tatagataat tagtggacca gtggcagaga aattaagaaa aaagatgatg 5820 tgaatgataa atgatatgat tagtgactgc ttggtaaggc aagtaaatca ttaaatcttg 5880 gttctcatca agttcatttt ctgaaaagat agcactgtat tgggaccaga attctacaaa 5940 acattctttt tacctaagac caagattttc aagaaatatt tttcaataca attctcagct 6000 gctccataac taatagtagc ttgttcaaca cagatttttt cagatggttc acacctgtag 6060 ttcttaccca gggatagttc accacccctc ccttccctcc catcatcctt ggggaacagt 6120 gacaatgttt ggaacaattt ttggttgtca caacaggggt ttcttctgat atttaatgag 6180 tagaagccag gaacactgct agagaaccta caatgttcag aacagcctcc gccatcaaca 6240 aagaattatc tggtccaaaa tgtcaatagt gctgaggctg agagcactgg ttcacgctgt 6300 gctctttttg aaaattctac actcacatct gttatacact caccacacag ttcagttttt 6360 tatagtttat ttttgcttgt tccattataa aaaaattaga cagttgcata aattcaacca 6420 ctttcttgtt gaatccactt agtcaatgca agcttaatat tttcatattt agtttttgcc 6480 ttatgcaata tttttcaaca ttttcatgag ttgttggtca tcaccatctc tattaacttc 6540 caacaacttg ctcttgtaag tcacaaatag tgatgctgct gaaattattt ctcagtaaca 6600 tgcctcagat ttctgtagtg attctacatt ttatattatt cacaatgtaa aatgcttcta 6660 tgtactcatt tcacttttac ccaaggatta tttttaagtt atttttgtcg ttttcacact 6720 tcaaacataa agacaaaaac atcaaaaata tatattgtgt tttacatatg tgtctatttt 6780 cacacatata tgtatgtatg tttatatgta tggaaactac agaagcacat gtcgccaata 6840 agagctctga gacacctttg accacttacc cttatcagat gagatttgcc aaatgagttg 6900 tggaaacaag ttttttaaac tgaatttctg agctttgtga atttagaaat gcaaaggaaa 6960 gtttgtggac atttacaggg atcatggttt tattgtcctt taaactcttc gatactttac 7020 cattgtctta ctataaatcc aaaatcctaa cgccacccac gaggctttca atacctggct 7080 tcttgtgatt tctccaggct aaccttttac cctccttccc ctcagcctct ctgctttagt 7140 gaactttctc ctagtttttt gaagaagttc atcaattcaa gcttttgtac atgggatttc 7200 ctaaacctga aatgtgcctc ccgttttgtc caaacagaca caggctccac tctgccccct 7260 ggctcacacc tgcttaacct gtcaagtcac atctgaactg tcactcttca gagggtcctt 7320 ctctggcacc ctaatgtaat tgagatcatc ctattattct ctgctctaga acttcccact 7380 tccgagattt ctcattcctg tctaacctct tgtgtgtctg gtttttggcc atcgctttca 7440 ctgctcttta agctccccca gcggagtgga gaggtctgtt ttccctcgtt tggattccta 7500 gaggcagcgc agaccaggca caaggtcagc actaaggaag tgttcacagg atgaacgcgg 7560 tgggtgctgt ttaaggaacc ggtaaacgtg tgggatgaga gaaggagcag agagtgtctt 7620 tggggtggag gctcccagga ggaggcgggg cgggctgcgg tgctgggcgg atcctcctcc 7680 agctcctgct tggaggtctc cagaacaagc tggaggcagg gatggggggt cccaaaagcc 7740 tggggatgag aaggggtttt cccgcatagt cccccaggcc cccgttcgcc tcaggaaaac 7800 ggaggatgag ctcctgggct gctggtggtg ggcgttgcgg gtggggcccg ttaaggttcc 7860 cagtgcccgc accccaccca gggagccccg gatggtggcg tcactgtcag tgtcttctca 7920 ggaggccgcc tgtgtgaccg gagcattcgt gtccccacag cacgtttctt ggagctgctt 7980 aagtctgagt gtcatttctt caatgggacg gagcgggtgc ggttcctgga gagatacttc 8040 cataaccagg aggagttcgt gcgcttcgac agcgacgtgg gggagtaccg ggcggtgacg 8100 gagctggggc ggcctgtcgc cgagtcctgg aacagccaga aggacctcct ggagcagaag 8160 cggggccagg tggacaatta ctgcagacac aactacgggg ttgtggagag cttcacagtg 8220 cagcggcgag gtgagcatgt cagggggcgg ggcctgggtc cctgtgagct ggaaatctga 8280 gagtgtgtgt gtgtgtatgt gtgtatgtgt gtgtgtgaga gagagagaca gagaggaaga 8340 gagagacaga gagagggagc gcgccatctg tgagcattta gaatcctctc aatcccgagc 8400 aagcagttct gaaggcacag gtgtgtgtgt agagtgtgga tttgtctgtg tctgtgtgcc 8460 tgttgtggga ggggaagcag aagggggctg cttcttatcc ttggagactt ctgtggagag 8520 gtgaaaaggg aggtgggtgc gggcggctgg agagagagga gaccttgatt gtcctgggtc 8580 cttagagatg cagggaagga aagtgtaagg tgtgtgtggg tggggtgaag gtttagggga 8640 ggagagctga ggggtaagga aggtttggga taatgtgagg aggccggttc cagactgtcc 8700 ctggcacaca cccttcatgt aatctctgaa ataaaagtgc gtgctgtttg taaaagcatt 8760 agattaagtt ctaggggaat tgagtagacc tctaaggcac ctctgaaact tctttaggta 8820 taaatttctt gctagttttt tgttttttta gtgtgtatat ttttacatag tagaaatgac 8880 agtgaaacta acttttgaat taaagtttta acacagttac tgtattatta taatgctaat 8940 agttttctag tagttacata ttattctttt atatataata gttgtgacac aacttaggga 9000 tcactttccc ctttgttgac ctttattatg acattcacca aaagttgaaa atgtatgttt 9060 ctggttaatt tttaatttat attttttcat ttgaaaaaat gtggagaggt ctgtttttca 9120 ttcaaaagag ttcttttgaa ttattttgac cgatttattg gtcaatttta ataactgctc 9180 taagaattcc ctattttatt tggtaggtaa tggacaatga tctactgcct aatatctcta 9240 gggcttagta tttttctcag tgactttgtg ggttctttgt actgtaagat tattaacact 9300 ttattgatat ttgattcagc atttgctcca gtttgtggtt tttatgttga ttttgaaaat 9360 tcttttccat gttaagaatt tgaacatttt tatttaataa aatgtattgc aaaaatttta 9420 ttaatgattt acaatccatc ttaaatctgc cattttgtgg tatttttgtc tctaggtttc 9480 tccttacttc taaaaacatt gtatttattg agagtatgct aatgtcgggg attttcctgg 9540 gcataagcat cacaagtaat gagttccaga ccctgcctta atccaaatgt gattctggaa 9600 agaaaaatca ttttacaatt ggcctgataa taattctgct tgtgttgcac gggggataca 9660 ttgagcagct gaatgaaaat ataagaactt tcaaaactaa aatgacgctc ctaaatcctt 9720 ctgtctgctt taggactcat gcttttctag gaacgtaaaa atttggagaa tcatttctgt 9780 ctgtcccacc ttcccagggg cagaaccatt tctgtggtgt tctaaggtgt gagtgcatgg 9840 cagcagtatt cctaaaaatt catactctgt tttctcatgt acccaactct gtccctttgt 9900 ctatgtacat tgctttaaat catatttttc tgtcacggtg tacaaggatg ataaataggt 9960 gccaagtgga gcacccaagt gtgatgagcc cccttatggt ggaatggagc gagaagcttt 10020 ctgacctcat aaattgaagg ctatcttcac tcattatgta ttttacgtaa attaatcctc 10080 atataacccc aagaggtaaa ttagtataat tatccttcat tgggggtgac aaagttgaga 10140 cacagaagaa tcaactcttc caggatcaac cagtaaaagg cagaccttgg atttgaacca 10200 tgcaacctgg ctcagatatc agttttaatt actacactct gtactttcaa aaatttgtaa 10260 acactttgac aatgcatgcc aatttcaagc tatgaagaag caaacgcaat ttttcacatc 10320 tctcaaatct aatgggtcct cactatcaag attaaattcc aggctgatga cactgtaagg 10380 ccacatggcc agctgtgctg gaggcctgtt caaggtcaga gcctgggttt gcagagaagc 10440 agacaaacac caaaaccagg agaattactc tgtcttcctg actcattccc tctacctttt 10500 tttctactag tccatcctca ggtgactgtg tatcctgcaa agacccagcc cctgcagcac 10560 cacaacctcc tggtctgttc tgtgagtggt ttctatccag gcagcattga agtcaggtgg 10620 ttccggaatg gccaggaaga gaagactggg gtggtgtcca caggcctgat ccataatgga 10680 gactggacct tccagaccct ggtgatgcta gaaacagttc ctcggagtgg agaggtttac 10740 acttgccaag tggagcaccc aagcgtaaca agccctctca cagtggaatg gagtgagcag 10800 ctttctgatt tcatacattt ctcacccacc aagaagggga ctgtgctaat ccctgagtgt 10860 caggtttctc ctctcccacg tcctattttc atttgttcca tgttctcatc tccatcagca 10920 caggtcactg gggatagccc tgtaacagtg tgtagaaaca cctgtacccc ctgtggaatc 10980 agtcatgctt tttttttttt gaacctcccc atgatgtcac aggtcagggt cacccgctct 11040 ccccaagctc caggccctgc ttttgggtct gagactgagt ttctggtgct gctgctctga 11100 gttacttgtt ttgatccggg aagaggggaa gcataggggc ctacctgaca tgaggggagt 11160 ctaatctcag ctctaccttt tattagctct gtcactctag acaaactact tagcttcatt 11220 gagtctcagg ctttctgttg atcagatgtt gaacgcttgc cttacatcaa tgctgtaata 11280 tttgaatgag tttgatgtcg gaaccttgta actgttcagt gtgatttgaa atcctttttt 11340 tctcccgaaa tggctagtta ttttagttct tgtggggcag ccttcttccc cattttcaaa 11400 gctctgaatc ttagagtctc aattaaagag gttcaatttg gaataaacgt cactaaacct 11460 ggcttcctct ctcaggagca cggtctgaat ctgcacagag caagatgctg agtggagtcg 11520 ggggctttgt gctgggcctg ctcttccttg gggccgggct gttcatctac ttcaggaatc 11580 agaaaggtaa ggagtctttg gtagctggct ctctccgtag gcttttctgg aggaggaact 11640 atagctttgc tgaggttagt tctcagtata tgagtggccc tgaataaagc ctttctttcc 11700 ccaaacggct ctaatgtcct gctaatccag aaatcatcag tgcatggtta ctatgtgaaa 11760 gcataatagc ttgtggcctg cagagacaag aggaaggtta acaagtaggg gtcctttggt 11820 ttgagatctt ggagcaaatt aaggaagagc cactaaagtt aatggaatta cactggatcc 11880 tgtgacagac acttcatgct tcatgggtca catggtctgt ttctgctcct ctctgccctg 11940 gttggtgtgg gttttggtgt tagagaactc tccggtggga gatctgggac tgggatattg 12000 tgttggagga cagatttgct tcaatatctt ttaagtgtat atcttttcct ctttttccca 12060 ggacactctg gacttcagcc aacaggtaat accttttaat cctcttttag acacagattc 12120 agtttctcta gtgagaggtg aagccagctg gacttctggg ttgggtgggg acttggagaa 12180 cttttctgtc ttacaagagg tttctaaatg caccaatgag tgctctgtaa aaacacacca 12240 atgagtgctc tgtaaaaatt gacactctgt ggcttgctag atgtttgtaa gatggaccaa 12300 tcagcactct gtaaaatgga ccaatccaca ctctgtaaaa tggaccaatc agcactcttt 12360 aaaatggacc aatcagcagg atacgggtgg ggacaaataa gggaataaaa gctggtcacc 12420 ctagccagca ccggcaacct gcttaggtcc ttttctatgc tgtggaaggt ctgttctttc 12480 actcttcaca ataaatcttg tgctcactct ttgggtccgt gccaccttta agagctataa 12540 cactcactgc aagggtctgt ggcttcactc ttgaagtcag ccagaccgtg aacccaccgg 12600 aaggaacaaa ctctggacac actagaatgg tggtagaggt gataaggcat gagacagaaa 12660 taataggaaa gactttggat ccaaatttct gatcaggcaa tttacaccaa aactcctcct 12720 ctccacttag aaaaggcctg tgctctgcag gactattggc tctgggagac tcaggaactt 12780 gtttttcttc ttcctgcagt gttctcatct gagtccttca aagaggggga aagaaacgtt 12840 agtagagcca ggttgaaaac aacactctcc tctgtctttt gca 12883 // ID KX687294; SV 1; linear; genomic DNA; STD; HUM; 8207 BP. XX AC KX687294; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate S1 MHC class II antigen (HLA-DRB3) gene, DE HLA-DRB3*03_01_01e4 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-8207 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-8207 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 2eb6e6505776ac9162bb5879a0fad38b. XX FH Key Location/Qualifiers FH FT source 1..8207 FT /organism="Homo sapiens" FT /isolate="S1" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <174..>8207 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*03_01_01e4" FT mRNA join(<174..273,7961..>8207) FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*03_01_01e4" FT /product="MHC class II antigen" FT CDS join(174..273,7961..>8207) FT /codon_start=1 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*03_01_01e4" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1D6" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR014745" FT /db_xref="UniProtKB/TrEMBL:A0A223G1D6" FT /protein_id="AST15807.1" FT /translation="MVCLKLPGGSSLAALTVTLMVLSSRLAFAGDTRPRFLELLKSECH FT FFNGTERVRFLERYFHNQEEFVRFDSDVGEYRAVTELGRPVAESWNSQKDLLEQKRGQV FT DNYCRHNYGVV" XX SQ Sequence 8207 BP; 2258 A; 1617 C; 1882 G; 2450 T; 0 other; gctgttgaac tcagatgctg attggttctc cgacacgaga ttacccaatc caggagcaag 60 gaaatcagta acttcctccc tataatttgg aatgtgggtg gaggggggtc atagttctcc 120 ctgagtgaga cttgcctgct cctctggccc ctggtcctgt cctcttctcc agcatggtgt 180 gtctgaagct ccctggaggc tccagcttgg cagcgttgac agtgacactg atggtgctga 240 gctcccgact ggctttcgct ggggacaccc gacgtaagag cacattgagg gtgctgagct 300 actatggggt gggggaatat agggagttgt gttaacattg tgcccaggcc atgtccctta 360 agaaattgtg aggttttctt cagagattgc tcatctttat caagggatcg caaattattt 420 cctccacaaa aggaacttgg ctacttgccc tctccatgag acttgtgtaa ggggcctttg 480 tacaggccat ttcttctcaa atctccacca ataaaacctt tgcatcacat gtactcaggg 540 tctttagagg atttggaaat aaggatgcta aaataaattc cccatacagc aattcccttt 600 attatgttga cttatgtcag acaaaaggag gtttttactg aaaattttgt gggagtcaag 660 ggaattcaaa gggtctctcc tagacgatcc tgggttatgt cctccacagg acctgtggtg 720 ttggcccctc ttcctcatat gtgaggatgg acccagtggc ctccctagta tctcctttct 780 tttctttctg aactccaatg tttataaagc ctgtatccct gtagtgtatg taggttgtct 840 gacagaagtt atacttagtg ctctttcttt cttgtgggga aaaatccctg gaactgaagc 900 tgagatcatt agtacttgga atcaccttac agatacagag cacttatgag gtattctttg 960 gtgcctaaag aacttaaggc atcctctgaa aaactggccc aggttagtgt ttattatgaa 1020 tctttttaac ctttctatac ttgtttctcc tgcatctcct acatgctcta actagacatg 1080 acagaagaga tttaactaat gtagtacaaa ttatatgaaa ttctattttt gtaagtcaaa 1140 aataatcaaa tatcagaaat ttaataatgt tcaaactata tactgtgtgg ggttaccgag 1200 acaatgtgga cattgttcac atctcatagg gctgaaagtc aatgggcaag tcctggaaac 1260 tcattgtctt actgcggtct tgtcctcagt ttcataggtt cacccatcat gccctcagct 1320 ttccttaatt agccatgtct gcttacctct tcctcccatt tctctctatt tttccccaac 1380 tatgttgtca tcatttccag aaatctctaa agcttgcaca gatccttagc actatgagat 1440 ccattgaaag agataatatt tttctctttg agatagggcc tggctctgtc acccaggctg 1500 tagctcagtg gtgcgatcga ggctcactgc aacctctgcc tcccacactc aagcaatcct 1560 ccctcctcag gctccagagt agctgggaat acaggcaggc aaccacgccc agctaatttt 1620 tgcaattttg gtagagagga gattttgcca tattgcccag gctggtctta aactgctgaa 1680 ctcaagcaat cctcctgcct tggcctccca acatgctagg attatagatg tgagccagtg 1740 tgcccaggca aaagagatga ctcttaataa aaagatttcc tttttcttaa atcactgttc 1800 ctttatccgt gaattcttct tccaactaga agaaggagaa agaagtttgc ctgtatttct 1860 caccaggagg agaaggggtc tagtgtgaca tcaaaatgaa agagtgctgg aacttgagcc 1920 ccttcttgct ttccaggatc cccacagtga tcagttccca taccctggtt tatttgtgta 1980 aaccacactt atttttctca gcagctactg tgtactgggt tccattctag gttcaaatca 2040 ttctatttga ttaagataga gagggtcccg actctcaagg aagttacgag agtggaggag 2100 acagacacta acccaataag catttaacaa agaagataat gttagagagt catagtgcac 2160 tgaagaaaag acatcagatg tgtgttgaaa gagagaaatg gattcatcta ctttagtttg 2220 tatgtttagg gagctctacc tgagaaagtg atattcagct gagacaacaa aataagtaga 2280 cagtcatgaa gatctaacgg acgaaagttt cagggagacc gaatcgaggg aaagcactgg 2340 tgtgggaaat tatgtggagg gagagaaaga aggctagaaa ggctgacgta tagaaagcaa 2400 ggaaatggag aggcagaaga tgaggtagga cacagagagg aagtcaggag cctcatcatt 2460 ataggctctg atgtccacgg taaaaaattt gaattttatt ttatttttat ttatttttaa 2520 attttattta tttatttatt ttgagatgga gtttcattct tgttgcccag gctggagtgc 2580 catggcgcaa tctccactca ctgcaacctc cacctcctgg gttcaagtga ttttcctgcc 2640 tcagcttccc aagtaactgg gattacaggc acccaccacc atacctggct aatttttttg 2700 tatttttagt atacatgggg tatcaccatg ttgaccaggc tggtcttgaa ctcctgacct 2760 cagataatct gtctgccttg gcctcccaaa gtgctgggat tacaggcgtg agccaccacc 2820 cccggactga attttattta aatagatatg agaagctgct gtatggttac aaggagagtc 2880 aatttatatt caacttttgt gtgtgtgtgt gatggagtct cactctgttg cccaggctag 2940 attgcagtgg cacaatctcg gctcactgca acctccgcct cccgggttca agaaattatc 3000 cttcctcagc ctcctgagta gctgggacca caggtgcatg ccaccacagt cggctacttt 3060 ttgtattttt agtagggatg gggtttcacc gtgttagcca agatggtctc gatctcctga 3120 ccttgtgatc caccagcctc ggcctcccaa agtgctggga ttacaggcat gagccactgc 3180 gcccagctta tattcaatta ttacaattaa ttctagctac tttgtgggga ttggattgtt 3240 ggggttcaca agtggttagg aggactattt aggagcacag cagggaattc tccagggaaa 3300 acaggcttgt ggcttcatgg agtgcattag tgataaagac ggtgaaaaag ataaagtgga 3360 cagacttggc atgtattttt gcttagcttg ttaatgaatt actgtaaagg gggtggaaca 3420 atcaagttta ttcctgagga ttttgttttg acaaataagt gggtggtagt tttgtttatt 3480 gagataggaa aaactgtggg aggaaatgat ttgaagtggg tggttggaaa taaaggtttt 3540 gtttaaatta gagatgattt attgacattt atgtagagca atcagaaggt cagtggcatt 3600 taagagactc atggtgaggt gaggctaggg cttcagatat ttatgttggc ggcatcaata 3660 cgtgtagtgt gttaaattct agggagtgga agaggataca tagggagatg gattgtgtgg 3720 agaaaaaaga acagggcaca ggccagcaaa gtgggctgag acagagccca gggatgttgg 3780 agaaaaacca agagaacata atgcgtgtaa gtcaaggaaa atatattttt ttcagggaga 3840 agggagaggc caattgtggt gagtaccact aagcagaggg ggaagtgaga acgtgacaga 3900 gaagcaagtg ctgggtttgg tggagttgat atttgtagtc aatggagtat ccagggagga 3960 aactggattg gactatttga agagtgagta gaagtgagga cgaggttaag gttgactgtt 4020 ttgagtagaa cttcgggaag gactgtgctc tgggttcagg gagcccgctg aatctaaagg 4080 aaaaggctaa agaagctaaa gagacggagg aagacctgtg aacaagagat gctcagtcat 4140 tagcaaggaa atactggaga gcccctgtgt gcagtggtga ctactcatgc aaaaggtcac 4200 acagccaata tttaacacag ccagtatttc acagagccaa tatttattag tgacatagaa 4260 tataccagtt attactctag gtcatgagag tggtgataaa taaaatgaat ccgctcgcca 4320 tcagtatatg ccatgtaaca gtttgcagtg actgtgtacc aggcctgtga atttctgtat 4380 gcaatttcaa taatgatcct gctgtatctg tggtatttaa aaacatatac atctctggaa 4440 tctaaaattg agaggttata agtaaaaccc agtattagaa atttagtgct ggaaatcaga 4500 ttgcagttta aatctgagca tatagaaagt ccctttcttc tatgtcagca gatgcctttt 4560 atgtgaggtt taggtatact acattattag acataaacca gtgtttctgc cctatgtttt 4620 cagaatgaca attctttatg aaactcatag aagaacagaa gacaattgca aaatcatgaa 4680 gatactaatt gctttagaat taaggaatac aaaaaataat gtgagctaca gttataggga 4740 tcataaaagt taaaatggga atgtatttga gtgtttatta tgtgatcagt gctaagaaga 4800 gtcatcattt aattttacac ttaacagtaa tcctgtgagg attatgctat tattaaatgc 4860 atttgatata ttacaaaaag gcttacggtt ggtaaaaatt gacccaagta gaagaggtca 4920 cctttttatt cagattttct gattgtaggg tttgagagtt tttccatcat tagtgagtag 4980 tgactatatt gtgtctgaat tattgacaga atttctgata ttcatatata ccaggttgtt 5040 tctttgagtg gggacagaga tgcaagggct gctaattcca atgtatagga gaaactttca 5100 atgattttgc atttatcatt ttaaaagttc agtatgtcta taatggtcat gcgttgacaa 5160 acacaaggaa gtattaaatc actccttctt ctgaggtttg actagcaaat tgggcaagag 5220 ttaccaaata aaacacatgt tcctagttaa atctaaattt cagatacacg accataattt 5280 attggaaatc caaatttaat tgggtaccct ctggttttat ttgccaaatc tgtcaaccct 5340 aagtgggaca catggacatg gattacagtg ctacccatgc aagccacagt gacagcaact 5400 ttacacatgt ttacatttta actttctctc tgtaagaaag tgcttagata atttagggat 5460 aaaaagatag acattgtttg atccagggtg gacacctctc tgccatcgtt tctaaagggc 5520 aaagggagat ttctgcaggt cttgctcaca gtctggggac ctgctcatgt tttgaaactg 5580 tctgtatcag aatgtcattt tcttggtttc tccctttctg aggggacttg actacaaaac 5640 caagagttct gcctctggcc aaggctggaa atgtgatgcc tgctagcatt gttgggagtg 5700 ggagactgag agaaatgagt tagttggggc atttaatggg aataaaatag ctgtggttgt 5760 gattcattac tatagataat tagtggacca gtggcagaga aattaagaaa aaagatgatg 5820 tgaatgataa atgatatgat tggtgactgc ttggtaaggc aaggaaatca ttaaatcttg 5880 gttctcatca agttcatttt ctgaaaagat agcactgtat tgggaccaga attctacaaa 5940 acattctttt tacctaggac caagattttc aagaaatatt tttcaataca attctcagct 6000 gctccataac taatagtagc ttgttcaaca cagatttttt cagatggttc acacctgtag 6060 ttcttaccca gggatagttc accacccctc ccttccctcc catcatcctt ggggaacagt 6120 gacaatgttt ggaacaattt ttggttgtca caacaggggt ttcttctgat atttaatgag 6180 tagaagccag gaacactgct agagaaccta caatgttcag aacagcctcc gccatcaaca 6240 aagaattatc tggtccaaaa tgtcaatagt gctgaggctg agagcactgg ttcacgctgt 6300 gctctttttg aaaattctac actcacatct gttatacact caccacacag ttcagttttt 6360 tatagtttat ttttgcttgt tccattataa aaaaattaga cagttgcata aattcaacca 6420 ctttcttgtt gaatccactt agtcaatgca agcttaatat tttcatattt agtttttgcc 6480 ttatgcaata tttttcaaca ttttcatgag ttgttggtca tcaccatctc tattaacttc 6540 caacaacttg ctcttgtaag tcacaaatag tgatgctgct gaaattattt ctcagtaaca 6600 tgcctcagat ttctgtagtg attctacatt ttatattatt cacaatgtaa aatgcttcta 6660 tgtactcatt tcacttttac ccaaggatta tttttaagtt atttttgtcg ttttcacact 6720 tcaaacataa agacaaaaac atcaaaaata tatactgtgt tttacatatg tgtctatttt 6780 cacacatata tgtatgtatg tttatatgta tggaaactac agaagcacat gtcgccaata 6840 agagctctga gacacctttg accacttacc cttatcagat gagatttgcc aaatgagttg 6900 tggaaacaag ttttttaaac tgaatttctg agctttgtga atttagaaat gcaaaggaaa 6960 gtttgtggac atttacaggg atcatggttt tattgtcctt taaactcttc gatactttac 7020 cattgtctta ctataaatcc aaaatcctaa cgccacccac gaggctttca atacctggct 7080 tcttgtgatt tctccaggct aaccttttac cctccttccc ctcagcctct ctgctttagt 7140 gaactttctc ctagtttttt gaagaagttc atcaattcaa gcttttgtac atgggatttc 7200 ctaaacctga aatgtgcctc ccgttttgtc caaacagaca caggctccac tctgccccct 7260 ggctcacacc tgcttaacct gtcaagtcac atctgaactg tcactcttca gagggtcctt 7320 ctctggcacc ctaatgtaat tgagatcatc ctattattct ctgctctaga acttcccact 7380 tccgagattt ctcattcctg tctaacctct tgtgtgtctg gtttttggcc atcgctttca 7440 ctgctcttta agctccccca gcggagtgga gaggtctgtt ttccctcgtt tggattccta 7500 gaggcagcgc aggccaggca caaggtcatc actaaggaag tgttcacaag atgaacgcgg 7560 tgggtgctgt ttaaggaacc ggtaaacgtg tgggatgaga gaaggagcag agagtgtctt 7620 tggggtggag gctcccagga ggaggcgggg cgggctgcgg tgctgggcgg atcctcctcc 7680 agctcctgct tggaggtctc cagaacaggc tggaggcagg gatggggggt cccaaaagcc 7740 tggggatgag aaggggtttt cccgcatagt cccccaggcc cccgttcgcc tcaggaaaac 7800 ggaggatgag ctcctgggct gctggtggtg ggcgttgcgg gtggggcccg ttaaggttcc 7860 cagtgcccgc accccaccca gggagccccg gatggtggcg tcactgtcag tgtcttctca 7920 ggaggccgcc tgtgtgaccg gagcattcgt gtccccacag cacgtttctt ggagctgctt 7980 aagtctgagt gtcatttctt caatgggacg gagcgggtgc ggttcctgga gagatacttc 8040 cataaccagg aggagttcgt gcgcttcgac agcgacgtgg gggagtaccg ggcggtgacg 8100 gagctggggc ggcctgtcgc cgagtcctgg aacagccaga aggacctcct ggagcagaag 8160 cggggccagg tggacaatta ctgcagacac aactacgggg ttgtgga 8207 // ID KX687295; SV 1; linear; genomic DNA; STD; HUM; 5158 BP. XX AC KX687295; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH13 MHC class II antigen (HLA-DRB3) gene, DE HLA-DRB3*01_01_02_01v2 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5158 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-5158 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; e6ced346a0e0180ecac285ffa6518ec2. XX FH Key Location/Qualifiers FH FT source 1..5158 FT /organism="Homo sapiens" FT /isolate="IH13" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <243..>4360 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*01_01_02_01v2" FT mRNA join(<243..512,2787..3068,3753..3863,4337..>4360) FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*01_01_02_01v2" FT /product="MHC class II antigen" FT CDS join(<243..512,2787..3068,3753..3863,4337..>4360) FT /codon_start=3 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*01_01_02_01v2" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1B8" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1B8" FT /protein_id="AST15808.1" FT /translation="RFLELRKSECHFFNGTERVRYLDRYFHNQEEFLRFDSDVGEYRAV FT TELGRPVAESWNSQKDLLEQKRGRVDNYCRHNYGVGESFTVQRRVHPQVTVYPAKTQPL FT QHHNLLVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSVTSALTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGH FT SGLQPT" XX SQ Sequence 5158 BP; 1290 A; 1058 C; 1281 G; 1529 T; 0 other; cagggagggg gtcccaaaag cctggggatg agaaggggtt ttcccgcata gtcccctagg 60 cccccgttcg cctgaggaaa acggaggatg agctcctggg ctgcaggtgg tgggcgttgc 120 gggtggggcc ggttaaggtt cccagtgccc gcaccccacc cagggagccc cggatggcgg 180 cgtcgctgtc agtgtcttct caggaggccg cccgtgtgac cggatccttc gtgtacccgc 240 agcacgtttc ttggagctgc gtaagtctga gtgtcatttc ttcaatggga cggagcgggt 300 gcggtacctg gacagatact tccataacca ggaggagttc ctgcgcttcg acagcgacgt 360 gggggagtac cgggcggtga cggagctggg gcggcctgtc gccgagtcct ggaacagcca 420 gaaggacctc ctggagcaga agcggggccg ggtggacaat tactgcagac acaactacgg 480 ggttggtgag agcttcacag tgcagcggcg aggtgagcat gtcggggggc ggggcctggg 540 tccctgtgag ctggaaatct gagagagagt gtgtgtgtgt gtgtgtgtgt gtgtgagaga 600 gagagagaga gagaggaaga gacagagaga gggagcgcgc catctgtgag catttagaat 660 cctctcaatc ccgagcaagc agttatgaag gcacaggtgt gtgtgtagag tgtggattgg 720 tctgtgtctg tgtgcctgtt gtgggagggg aagcaggagg gggctgcttc ttatccttgg 780 agacttctgt ggagaggtga caagggaggt gggtgcgggc ggctggagag agaggagacc 840 ttgattgtcc tgggtcctta gagatgcagg gaaggaaagt gtaaggtgtg tgtgggtggg 900 gtgaaggttt aggggaggag agctgagggg taaggaaggt ttgggataat gtgaggaggc 960 cggttccaga ctgtccctgg cacacaccct tcatgtaatc tctgaaataa aagtgcgtgc 1020 tgtttgtaaa agcattagat taagttctag gggaattgag tagacctcta aggcacctct 1080 gaaacttctt taggtataaa tttcttgcta gttttttgtt tttctagtgt gtatattttt 1140 acatagtaga aatgacagtg aaactaactt ttgaattaaa gttttaacac agttactgta 1200 ttattataat gctaatagtt ttctagtagt tacatattat tcttttatat ataatagttg 1260 tgacacaact tagggatcac tttccccttt gttgaccttt attatgacat tcaccaaaag 1320 ttgaaaatgt atgtttctgg ttaattttta atttatattt tttcatttga aaaaatgtgg 1380 agaggtctgt ttttcattca aaagagttct tttgaattat tttgaccgat ttattggtca 1440 attttaataa ctgctctaag aattccctat tttatttggt aggtaatgga caatgatcta 1500 ctgcctaata tctctagggc ttagtatttt tctcagtgac tttgtgggtt ctttgtactg 1560 taagattatt aacactttat tgatatttga ttcagcattt gctccagttt gtggtttgta 1620 tgttgatttt gaaaattctt ttccatgtta agaatttgaa catttttatt taataaaatg 1680 tattgcaaaa attttattaa tgatttacaa tccatcttaa atctgccatt ttgtggtatt 1740 tttgtctcta ggtttctcct tacttctaaa aacattgtat ttattgagag tatgctaatg 1800 tcggggattt tcctgggcat aagcaccacc agtaatgagt tccagaccct gccttaatcc 1860 aaatgtgatt ctggaaagaa aaatcatttt acaattggcc tgataataat tctgcttgtg 1920 ttgcacgggg gatacattga gcagctgaat gaaaatataa gaactttcaa aactaaaatg 1980 acgctcctaa atccttctgt ctgctttagg actcatgctt ttctaggaac gtaaaaattt 2040 ggagaatcat ttctgtctgt cccaccttcc caggggcaga accatttctg tggtgttcta 2100 aggtgtgagt gcatggcagt agtattccta aaaattcata ctcggttttc tcatgtaccc 2160 aactctgtcc ctttgtctat gtacattgct ttaaatcata tttttctgtc acggtgtaca 2220 aggatgataa ataggtgcca agtggagcac ccaagtgtga tgagccccct tacggtggaa 2280 tggagtgaga agctttctga tctcataaat tgaaggctat cttcagtcat tatgtatttt 2340 acataaatta atcctcatat aaccccaaga ggtaaattag tataattatc cttcattggg 2400 ggtgacaaag ttgagacaca gaagaatcaa ctcttccagg atcaaccagt aaaaggcaga 2460 ccttggattt gaaccatgca acctggctca ggtatcagtt ttaattacta cactctgtac 2520 tttcaaaaat ttgtaaacac tttgacaatg catgccaatt tcaagttatg aagaagcaaa 2580 cgcaattttt cacatctctc aaatctaatg ggtcctcact atcaagatta aattccaggc 2640 tgatgacact gtaaggccac atggccagct gtgctggagg cctggtcaag gtcagagcct 2700 gggtttgcag agaagcagac aaacagccaa accagcagaa ttactctgtc ttcctgactc 2760 attccctcta cctttttttc tcctagtcca tcctcaggtg actgtgtatc ctgcaaagac 2820 ccagcccctg cagcaccaca acctcctggt ctgctctgtg agtggtttct atccaggcag 2880 cattgaagtc aggtggttcc ggaacggcca ggaagagaag gctggggtgg tgtccacggg 2940 cctgatccag aatggagact ggaccttcca gaccctggtg atgctagaaa cagttcctcg 3000 gagtggagag gtttacactt gccaagtgga gcacccaagc gtaacgagcg ctctcacagt 3060 ggaatggagt gagcagcttt ctgatttcat acatttctca cccaccaaga aggggactgt 3120 gctaatccct gagtgtcagg tttctcctct cccacgtcct attttcattt gctccatgtt 3180 ctcatctcca tcagcacagg tcactgggga tagccctgta acagtgtgta gaaacacctg 3240 tactccctgt ggaatcagtc atgctttttt tttttttgaa cctccccatg atgtcacagg 3300 tcagggtcac ccgatctccc caagctccag gccctgcttc tgggtctgag actgagtttc 3360 tggtgctgct gctctgagtt acttgttttg atctgggaag aggggaagca taggggccta 3420 cctgacatga ggggagtcca atctcagctc tgccttttat tagctctgtc actctagaca 3480 aactacttag cctcactgag tctcaggctt tctgtggatc agatgttgaa cgcttgcctt 3540 acatcaaggc tgtaatattt gaatgagttt gatgtcggaa ccttgtaact gttcagtgtg 3600 atttgaaatc ctttttttct cccaaaatgg ctagttattt tagttcttgt ggggcagcct 3660 tcttccccat tttcaaagct ctgaatctta gagtctcaat taaagaggtt caatttggaa 3720 taagcatcac taaacctggc ttcctctctc aggagcacgg tctgaatctg cacagagcaa 3780 gatgctgagt ggagtcgggg gctttgtgct gggcctgctc ttccttgggg ccgggctgtt 3840 catctacttc aggaatcaga aaggtgagga gcctttggta gctgggcctt tccataggct 3900 tttctgcagg aggaaataga gctttgctga ggttagttct cagtatatga gtggctctga 3960 ataaagcctt tctttcccca aacggctcta atgtcctgct aatccagaaa tcatcagtgc 4020 atggttacta tgtgaaagca taatagcttg tggcctgcag agacaagagg aaggttaaca 4080 agtaggggtc ctttggtttg agatcttgga gcaaattaag gaagagccac taaagttaat 4140 ggaattacac tggatcctgt gacagacact tcatgcttca tgggtcacat ggtctgtttc 4200 tgctcctctc tgccctggtt ggtgtgggtt ttggtgttag aactctccgg tgggagatct 4260 gggactgtga tattgtgttg gaggacagat ttgcttcaat atcttttaag tgtatatctt 4320 ttcctctttt tcccaggaca ctctggactt cagccaacag gtaatacctt ttaatcctct 4380 tttagacaca gattcagttt ctccagtgag aggtgaagcc agctggactt ctgggttggg 4440 tggggacttg gagaactttt ctgtcttaca agaggtttct aaatgcacca atgagtgctc 4500 tgtaaaaaca caccaatgag tgctctgtaa aaattgacac tctgtggctc gctagatgtt 4560 tgtaagatgg accaatcagc actctgtaaa atggaccaat ccacactctg taaaatggac 4620 caatcagcac tctttaaaat ggaccaatca gcaggatacg ggcggggaca aataagggaa 4680 taaaagctgg tcaccctagc cagcacctgc aacctgctta ggtccttttc tatgctgtgg 4740 aagttttgtt cttttgatct tcacaataaa tcttgtgctc actctttggg tccgtgccac 4800 ctttaagagc tataacactc actgcaaggg tctgtggctt cactcttgaa gtcagccaga 4860 ccctgaacct accggaagga acaaactcag gacacactag aatgatggta gaggtgataa 4920 ggcatgagac agaaataata ggaaagactt tggatccaaa tttctgatca ggcaatttac 4980 accaaaactc ctcctctcca cttagaaaag gcctgtgctc tgcaggacta ttggctctgg 5040 gagactcagg aacttgtttt tcttcttcct gcagtgttct catctgagtc cttcaaagag 5100 ggggaaagaa acgttagtag agccaggttg aaaacaacac tctcctctgt cttttgca 5158 // ID KX687296; SV 1; linear; genomic DNA; STD; HUM; 5161 BP. XX AC KX687296; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate SG MHC class II antigen (HLA-DRB3) gene, DE HLA-DRB3*03_01_03e1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5161 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-5161 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; b05a37fda4b09879bf08ee38d6951b84. DR IMGT/HLA; HLA-DRB3*03:01:03:01; HLA03573. XX FH Key Location/Qualifiers FH FT source 1..5161 FT /organism="Homo sapiens" FT /isolate="SG" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <245..>4363 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*03_01_03e1" FT mRNA join(<245..514,2789..3070,3754..3864,4340..>4363) FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*03_01_03e1" FT /product="MHC class II antigen" FT CDS join(<245..514,2789..3070,3754..3864,4340..>4363) FT /codon_start=3 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*03_01_03e1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1A9" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1A9" FT /protein_id="AST15809.1" FT /translation="RFLELLKSECHFFNGTERVRFLERYFHNQEEFVRFDSDVGEYRAV FT TELGRPVAESWNSQKDLLEQKRGQVDNYCRHNYGVVESFTVQRRVHPQVTVYPAKTQPL FT QHHNLLVCSVSGFYPGSIEVRWFRNGQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSVTSPLTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGH FT SGLQPT" XX SQ Sequence 5161 BP; 1297 A; 1056 C; 1269 G; 1539 T; 0 other; cagggatggg gggtcccaaa agcctgggga tgagaagggg ttttcccgca tagtccccca 60 ggcccccgtt cgcctcagga agacggagga tgagctcctg ggctgcaggt ggtgggcgtt 120 gcgggtgggg cccgttaagg ttcccagtgc ccgcacccca cccagggagc cccggatggt 180 ggcgtcactg tcagtgtctt ctcaggaggc cgcctgtgtg accggagcat tcgtgtcccc 240 acagcacgtt tcttggagct gcttaagtct gagtgtcatt tcttcaatgg gacggagcgg 300 gtgcggttcc tggagagata cttccataac caggaggagt tcgtgcgctt cgacagcgac 360 gtgggggagt accgggcggt gacggagctg gggcggcctg tcgccgagtc ctggaacagc 420 cagaaggacc tcctggagca gaagcggggc caggtggaca attactgcag acacaactac 480 ggggttgtgg agagcttcac agtgcagcgg cgaggtgagc atgtcggggg gcggggcctg 540 ggtccctgtg agctggaaat ctgagagtgt gtgtgtgtgt atgtgtgtat gtgtgtgtgt 600 gagagagaga gacagagagg aagagagaga cagagagagg gagcgcgcca tctgtgagca 660 tttagaatcc tctcaatccc gagcaagcag ttctgaaggc acaggtgtgt gtgtagagtg 720 tggatttgtc tgtgtctgtg tgcctgttgt gggaggggaa gcagaagggg gctgcttctt 780 atccttggag acttctgtgg agaggtgaaa agggaggtgg gtgcgggcgg ctggagagag 840 aggagacctt gattgtcctg ggtccttaga gatgcaggga aggaaagtgt aaggtgtgtg 900 tgggtggggt gaaggtttag gggaggagag ctgaggggta aggaaggttt gggataatgt 960 gaggaggccg gttccagact gtccctggca cacacccttc atgtaatctc tgaaataaaa 1020 gtgcgtgctg tttgtaaaag cattagatta agttctaggg gaattgagta gacctctaag 1080 gcacctctga aacttcttta ggtataaatt tcttgctagt tttttgtttt tttagtgtgt 1140 atatttttac atagtagaaa tgacagtgaa actaactttt gaattaaagt tttaacacag 1200 ttactgtatt attataatgc taatagtttt ctagtagtta catattattc ttttatatat 1260 aatagttgtg acacaactta gggatcactt tcccctttgt tgacctttat tatgacattc 1320 accaaaagtt gaaaatgtat gtttctggtt aatttttaat ttatattttt tcatttgaaa 1380 aaatgtggag aggtctgttt ttcattcaaa agagttcttt tgaattattt tgaccgattt 1440 attggtcaat tttaataact gctctaagaa ttccctattt tatttggtag gtaatggaca 1500 atgatctact gcctaatatc tctagggctt agtatttttc tcagtgactt tgtgggttct 1560 ttgtactgta agattattaa cactttattg atatttgatt cagcatttgc tccagtttgt 1620 ggtttttatg ttgattttga aaattctttt ccatgttaag aatttgaaca tttttattta 1680 ataaaatgta ttgcaaaaat tttattaatg atttacaatc catcttaaat ctgccatttt 1740 gtggtatttt tgtctctagg tttctcctta cttctaaaaa cattgtattt attgtattaa 1800 tgtcggggat tttcctgggc ataagcatca caagtaatga gttccagacc ctgccttaat 1860 ccaaatgtga ttctggaaag aaaaatcatt ttacaattgg cctgataata attctgcttg 1920 tgttgcacgg gggatacatt gagcagctga atgaaaatat aagaactttc aaaactaaaa 1980 tgacgctcct aaatccttct gtctgcttta ggactcatgc ttttctagga acgtaaaaat 2040 ttggagaatc atttctgtct gtcccacctt cccaggggca gaaccatttc tgtggtgttc 2100 taaggtgtga gtgcatggca gcagtattcc taaaaattca tactcggttt tctcatgtac 2160 ccaactctgt ccctttgtca atgtacattg ctttaaatca tatttttctg tcacggtgta 2220 caaggatgat aaataggtgc caagtggagc acccaagtgt gatgagcccc cttatggtgg 2280 aatggagcga gaagctttct gacctcataa attgaaggct atcttcactc attatgtatt 2340 ttacgtaaat taatcgtcat ataaccccaa gaggtaaatt agtataatta tccttcattg 2400 ggggtgacaa agttgagaca cagaagaatc aactcttcca ggatcaacca gtaaaaggca 2460 gaccttggat ttgaaccatg caacctggct cagatatcag ttttaattac tacactctgt 2520 actttcaaaa atttgtaaac actttgacaa tgcatgccaa tttcaagcta tgaagaagca 2580 aacgcaattt ttcacatctc tcaaatctaa tgggtcctca ctatcaagat taaattccag 2640 gctgatgaca ctgtaaggcc acatggccag ctgtgctgga ggcctgttca aggtcagagc 2700 ctgggtttgc agagaagcag acaaacacca aaaccaggag aattactctg tcatcctgac 2760 tcattccctc tacctttttt tctactagtc catcctcagg tgactgtgta tcctgcaaag 2820 acccagcccc tgcagcacca caacctcctg gtctgttctg tgagtggttt ctatccaggc 2880 agcattgaag tcaggtggtt ccggaatggc caggaagaga agactggggt ggtgtccaca 2940 ggcctgatcc ataatggaga ctggaccttc cagaccctgg tgatgctaga aacagttcct 3000 cggagtggag aggtttacac ttgccaagtg gagcacccaa gcgtaacgag ccctctcaca 3060 gtggaatgga gtgagcagct ttctgacttc atacatttct cacccaccaa gaaggggact 3120 gtgctaatcc ctgagtgtca ggtttctcct ctcccacgtc ctattttcat ttgttccatg 3180 ttcccatctc catcagcaca ggtcactggg gatagccctg taacagtgtg tagaaacacc 3240 tgtaccccct gtggaatcag tcatgctttt ttttttttga acctccccat gatgtcacag 3300 gtcagggtca cccgctctcc ccaagctcca ggccctgctt ttgggtctga gactgagttt 3360 ctggtgctgc tgctctgagt tacttgtttt gatccgggaa gaggggaagc ataggggcct 3420 acctgacatg aggggagtct aatctcagct ctacctttta ttagctctgt cactctagac 3480 aaactactta gcttcattga gtctcaggct ttctgttgat cagatgttga acgcttgcct 3540 tacatcaatg ctgtaatatt tgaatgagtt tgatgtcaga accttgtaac tgttcagtgt 3600 gatttgaaat cctttttttc tcccgaaatg gctagttatt ttagttcttg tggggcagcc 3660 ttcttcccca ttttcaaagc tctgaatctt agagtctcaa ttaaagaggt tcaatttgga 3720 ataaacgtca ctaaacctgg cttcctctct caggagcacg gtctgaatct gcacagagca 3780 agatgctgag tggagtcggg ggcttcgtgc tgggcctgct cttccttggg gccgggctgt 3840 tcatctactt caggaatcag aaaggtaagg agtctttggt agctggctct ctccgtaggc 3900 ttttctggag gaggaactat agctttgctg aggttagttc tcagtatatg agtggccctg 3960 aataaagcct ttctttcccc aaacggctct aatgtcctgc taatccagaa atcatcagtg 4020 catggttact atgtgaaagc ataatagctt gtggcctgca gagacaagag gaaggttaac 4080 aagtaggggt cctttggttt gagatcttgg agcaaattaa ggaagagcca ctaaagttaa 4140 tggaattaca ctggatcctg tgacagacac ttcatgcttc atgggtcaca tggtctgttt 4200 ctgctcctct ctgccctggt tggtgtgggt tttggtgtta gagaactctc cggtgggaga 4260 tctgggactg ggatattgtg ttggaggaca gatttgcttc aatatctttt aagtgtatat 4320 cttttcctct ttttcccagg acactctgga cttcagccaa caggtaatac cttttaatcc 4380 tcttttagac acagattcag tttctctagt gagaggtgaa gccagctgga cttctgggtt 4440 gggtggggac ttggagaact tttctgtctt acaagaggtt tctaaatgca ccaatgagtg 4500 ttctgtaaaa acacaccaat gagtgctctg taaaaattga cactctgtgg cttgctagat 4560 gtttgtaaga tggaccaatc agcactctgt aaaatggacc aatccacact ctgtaaaatg 4620 gaccaatcag cactctttaa aatggaccaa tcagcaggat acgggtgggg acaaataagg 4680 gaataaaagc tggtcaccct agccagcacc ggcaacctgc ttaggtcctt ttctatgctg 4740 tggaaggtct gttctttcac tcttcacaat aaatcttgtg ctcactcttt gggtccgtgc 4800 cacctttaag agctataaca ctcactgcaa gggtctgtgg cttcactctt gaagtcagcc 4860 agaccctgaa cccaccggaa ggaacaaact caggacacac tagaatggtg gtagaggtga 4920 taaggcatga gacagaaata ataggaaaga ctttggatcc aaatttctga tcaggcaatt 4980 tacaccaaaa ctcctcctct ccacttagaa aaggcctgtg ctctgcagga ctattggctc 5040 tgggagactc aggaacttgt ttttcttctt cctgcagtgt tctcatctga gtccttcaaa 5100 gagggggaaa gaaacgttag tagagccagg ttgaaaacaa cactctcctc tgtcttttgc 5160 a 5161 // ID KX687297; SV 1; linear; genomic DNA; STD; HUM; 8207 BP. XX AC KX687297; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH50 MHC class II antigen (HLA-DRB3) gene, DE HLA-DRB3*03_01_01e3 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-8207 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-8207 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 26bf43a323103138b0c4b1e1ccafe393. XX FH Key Location/Qualifiers FH FT source 1..8207 FT /organism="Homo sapiens" FT /isolate="IH50" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <174..>8207 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*03_01_01e3" FT mRNA join(<174..273,7961..>8207) FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*03_01_01e3" FT /product="MHC class II antigen" FT CDS join(174..273,7961..>8207) FT /codon_start=1 FT /gene="HLA-DRB3" FT /allele="HLA-DRB3*03_01_01e3" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1C0" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR014745" FT /db_xref="UniProtKB/TrEMBL:A0A223G1C0" FT /protein_id="AST15810.1" FT /translation="MVCLKLPGGSSLAALTVTLMVLSSRLAFAGDTRPRFLELLKSECH FT FFNGTERVRFLERYFHNQEEFVRFDSDVGEYRAVTELGRPVAESWNSQKDLLEQKRGQV FT DNYCRHNYGVV" XX SQ Sequence 8207 BP; 2265 A; 1615 C; 1874 G; 2453 T; 0 other; gctgttgaac tcagatgctg attggttctc cgacacgaga ttacccaatc caggagcaag 60 gaaatcagta acttcctccc tataatttgg aatgtgggtg gaggggggtc atagttctcc 120 ctgagtgaga cttgcctgct cctctggccc ctggtcctgt cctcttctcc agcatggtgt 180 gtctgaagct ccctggaggc tccagcttgg cagcgttgac agtgacactg atggtgctga 240 gctcccgact ggctttcgct ggggacaccc gacgtaagag cacattgagg gtgctgagct 300 actatggggt gggggaatat agggagttgt gttaacattg tgcccaggcc atgtccctta 360 agaaattgtg aggttttctt cagagattgc tcatctttat caagggatcg caaattattt 420 cctccacaaa aggaacttgg ctacttgccc tctccatgag acttgtgtaa ggggcctttg 480 tacaggccat ttcttctcaa atctccacca ataaaacctt tgcatcacat gtactcaggg 540 tctttagagg atttggaaat aaggatgcta aaataaattc cccatacagc aattcccttt 600 attatgttga cttatgtcag acaaaaggag gtttttactg aaaattttgt gggagtcaag 660 ggaattcaaa gggtctctcc tagacgatcc tgggttatgt cctccacagg acctgtggtg 720 ttggcccctc ttcctcatat gtgaggatgg acccagtggc ctccctagta tctcctttct 780 tttctttctg aactccaatg tttataaagc ctgtatccct gtagtgtatg taggttgtct 840 gacagaagtt atacttagtg ctctttcttt cttttgggga aaaatccctg gaactgaagc 900 tgagatcatt agtacttgga atcaccttac agatacagag cacttatgag gtattctttg 960 gtgcctaaag aacttaaggc atcctctgaa aaactggccc aggttagtgt ttattatgaa 1020 tctttttaac ctttctatac ttgtttctcc tacatctcct acatgctcta actagacatg 1080 acagaagaga tttaactaat gtagtataaa ttatatgaaa ttctattttt gtaagtcaaa 1140 aataatcaaa tatcagaaat ttaataatgt tcaaactata tactgtgtgg ggttaccgag 1200 acaatgtgga cattgttcac atctcatagg gctgaaagtc aatgggcaag tcctggaaac 1260 tcattgtctt actgcggtct tgtcctcagt ttcataggtt cacccatcat gccctcagct 1320 ttccttaatt agccatgtct gcttacctct tcctcccatt tctctctatt tttccccaac 1380 tatgttgtca tcatttccag aaatctctaa agcttgcaca gatccttagc actatgagat 1440 ccattgaaag agataatatt tttctctttg agatagggcc tggctctgtc acccaggctg 1500 tagctcagtg gtgcgatcga ggctcactgc aacctctgcc tcccacactc aagcaatcct 1560 ccctcctcag gctccagagt agctgggaat acaggcaggc aaccacgccc agctaatttt 1620 tgcaattttg gtagagagga gattttgcca tattgcccag gctggtctta aactgctgaa 1680 ctcaagcaat cctcctgcct tagcctccca acatgctagg attatagatg tgagccagtg 1740 tgcccaggca aaagagatga ctcttaataa aaagatttcc tttttcttaa atcactgttc 1800 ctttatccgt gaattcttct tccaactaga agaaggagaa agaagtttgc ctgtatttct 1860 caccaggagg agaaggggtc tagtgtgaca tcaaaatgaa agagtgctgg aacttgagcc 1920 ccttcttgct ttccaggatc cccacagtga tcagttccca taccctggtt tatttgtgta 1980 aaccacactt atttttctca gcagctactg tgtactgggt tccattctag gttcaaatca 2040 ttctatttga ttaagataga gagggtcccg actctcaagg aagttacaag agtggaggag 2100 acagacacta acccaataag catttaacaa agaagataat gttagagagt catagtgcac 2160 tgaagaaaag acatcagatg tgtgttgaaa gagagaaatg gattcatcta ctttagtttg 2220 tatgtttagg gagctctacc tgagaaagtg atattcagct gagacaacaa aataagtaga 2280 cagtcatgaa gatctaacgg acgaaagttt cagggagacc gaatcgaggg aaagcactgg 2340 tgtgggaaat tatgtggagg gagagaaaga aggctagaaa ggctgacgta tagaaagcaa 2400 ggaaatggag aggcagaaga tgaggtagga cacagagagg aagtcaggag cctcatcatt 2460 ataggctctg atgtccacgg taaaaaattt gaattttatt ttatttttat ttatttttaa 2520 attttattta tttatttatt ttgagatgga gtttcattct tgttgcccag gctggagtgc 2580 catggcgcaa tctccactca ctgcaacctc cacctcctgg gttcaagtga ttttcctgcc 2640 tcagcttccc aagtaactgg gattacaggc acccaccacc atacctggct aatttttttg 2700 tatttttagt atacatgggg tatcaccatg ttgaccaggc tggtcttgaa ctcctgacct 2760 cagataatct gtctgccttg gcctcccaaa gtgctgggat tacaggcgtg agccaccacc 2820 cccggactga attttattta aatagatatg agaagctgct gtatggttac aaggagagtc 2880 aatttatatt caacttttgt gtgtgtgtgt gatggagtct cactctgttg cccaggctag 2940 attgcagtgg cacaatctcg gctcactgca acctccgcct cccgggttca agaaattatc 3000 cttcctcagc ctcctgagta gctgggacca caggtgcatg ccaccacagt cggctacttt 3060 ttgtattttt agtagggatg gggtttcacc gtgttagcca agatggtctc gatctcctga 3120 ccttgtgatc caccagcctc ggcctcccaa agtgctggga ttacaggcat gagccactgc 3180 gcccagctta tattcaatta ttacaattaa ttctagctac tttgtgggga ttggattgtt 3240 ggggttcaca agtggttagg aggactattt aggagcacag cagggaattc tccagggaaa 3300 acaggcttgt ggcttcatgg agtgcattag tgataaagac ggtgaaaaag ataaagtgga 3360 cagacttggc atgtattttt gcttagcttg ttaatgaatt actgtaaagg gggtggaaca 3420 atcaagttta ttcctgagga ttttgttttg acaaataagt gggtggtagt tttgtttatt 3480 gagataggaa aaactgtggg aggaaatgat ttgaagtggg tggttggaaa taaaagtttt 3540 gtttaaatta gagatgattt attgacattt atgtagagca atcagaaggt cagtggcatt 3600 taagagactc atggtgaggt gaggctaggg cttcagatat ttatgttggc ggcatcaata 3660 cgtgtagtgt gttaaattct agggagtgga agaggataca tagggagatg gattgtgtgg 3720 agaaaaaaga acagggcaca ggccagcaaa gtgggctgag acagagccca gggatgttgg 3780 agaaaaacca agagaacata atgcgtgtaa gtcaaggaaa atatattttt ttcagggaga 3840 agggagaggc caattgtggt gagtaccact aagcagaggg ggaagtgaga acgtgacaga 3900 gaagcaagtg ctgggtttgg tggagttgat atttgtagtc aatggagtat ccagggagga 3960 aactggattg gactatttga agagtgagta gaagtgagga cgaggttaag gttgactgtt 4020 ttgagtagaa cttcgggaag gactgtgctc tgggttcagg gagcccgctg aatctaaagg 4080 aaaaggctaa agaagctaaa gagacggagg aagacctgtg aacaagagat gctcagtcat 4140 tagcaaggaa atactggaga gcccctgtgt gcagtggtga ctactcatgc aaaaggtcac 4200 acagccaata tttaacacag ccagtatttc acagagccaa tatttattag tgacatagaa 4260 tataccagtt attactctag gtcatgagag tggtgataaa taaaatgaat ccgctcgcca 4320 tcagtatatg ccatgtaaca gtttgcagtg actgtgtacc aggcctgtga atttctgtat 4380 gcaatttcaa taatgatcct gctgtatctg tggtatttaa aaacatatac atctctggaa 4440 tctaaaattg agaggttata agtaaaaccc agtattagaa atttagtgct ggaaatcaga 4500 ttgcagttta aatctgagca tatagaaagt ccctttcttc tatgtcagca gatgcctttt 4560 atgtgaggtt taggtatact acattattag acataaacca gtgtttctgc cctatgtttt 4620 cagaatgaca attctttatg aaactcatag aagaacagaa gacaattgca aaatcatgaa 4680 gatactaatt gctttagaat taaggaatac aaaaaataat gtgagctaca gttataggga 4740 tcataaaagt taaaatggga atgtatttga gtgtttatta tgtgatcagt gctaagaaga 4800 gtcatcattt aattttacac ttaacagtaa tcctgtgagg attatgctat tattaaatgc 4860 atttgatata ttacaaaaag gcttacggtt ggtaaaaatt gacccaagta gaagaggtca 4920 cctttttatt cagattttct gattgtaggg tttgagagtt tttccatcat tagtgagtag 4980 tgactatatt gtgtctgaat tattgacaga atttctgata ttcatatata ccaggttgtt 5040 tctttgagtg gggacagaga tgcaagggct gctaattcca atgtatagga gaaactttca 5100 atgattttgc atttatcatt ttaaaagttc agtatgtcta taatggtcat gcgttgacaa 5160 acacaaggaa gtattaaatc actccttctt ctgaggtttg actagcaaat tgggcaagag 5220 ttaccaaata aaacacatgt tcctagttaa atctaaattt cagatacacg accataattt 5280 attggaaatc caaatttaat tgggtaccct ctggttttat ttgccaaatc tgtcaaccct 5340 aagtgggaca catggacatg gattacagtg ctacccatgc aagccacagt gacagcaact 5400 ttacacatgt ttacatttta actttctctc tgtaagaaag tgcttagata atctagggat 5460 aaaaagatag acattgtttg atccagggtg gacacctctc tgccatcgtt tctaaagggc 5520 aaagggagat ttctgcaggt cttgctcaca gtctggggac ctgctcatgt tttgaaactg 5580 tctgtatcag aatgtcattt tcttggtttc tccctttctg aggggacttg actacaaaac 5640 caagagttct gcctctggcc aaggctggaa atgtgatgcc tgctagcatt gttgggagtg 5700 ggagactgag agaaatgagt tagttggggc atttaatggg aataaaatag ctgtggttgt 5760 gattcattac tatagataat tagtggacca gtggcagaga aattaagaaa aaagatgatg 5820 tgaatgataa atgatatgat tagtgactgc ttggtaaggc aagtaaatca ttaaatcttg 5880 gttctcatca agttcatttt ctgaaaagat agcactgtat tgggaccaga attctacaaa 5940 acattctttt tacctaagac caagattttc aagaaatatt tttcaataca attctcagct 6000 gctccataac taatagtagc ttgttcaaca cagatttttt cagatggttc acacctgtag 6060 ttcttaccca gggatagttc accacccctc ccttccctcc catcatcctt ggggaacagt 6120 gacaatgttt ggaacaattt ttggttgtca caacaggggt ttcttctgat atttaatgag 6180 tagaagccag gaacactgct agagaaccta caatgttcag aacagcctcc gccatcaaca 6240 aagaattatc tggtccaaaa tgtcaatagt gctgaggctg agagcactgg ttcacgctgt 6300 gctctttttg aaaattctac actcacatct gttatacact caccacacag ttcagttttt 6360 tatagtttat ttttgcttgt tccattataa aaaaattaga cagttgcata aattcaacca 6420 ctttcttgtt gaatccactt agtcaatgca agcttaatat tttcatattt agtttttgcc 6480 ttatgcaata tttttcaata ttttcatgag ttgttggtca tcaccatctc tattaacttc 6540 caacaacttg ctcttgtaag tcacaaatag tgatgctgct gaaattattt ctcagtaaca 6600 tgcctcagat ttctgtagtg attctacatt ttatattatt cacaatgtaa aatgcttcta 6660 tgtactcatt tcacttttac ccaaggatta tttttaagtt atttttgtcg ttttcacact 6720 tcaaacataa agacaaaaac atcaaaaata tatattgtgt tttacatatg tgtctatttt 6780 cacacatata tgtatgtatg tttatatgta tggaaactac agaagcacat gtcgccaata 6840 agagctctga gacacctttg accacttacc cttatcagat gagatttgcc aaatgagttg 6900 tggaaacaag ttttttaaac tgaatttctg agctttgtga atttagaaat gcaaaggaaa 6960 gtttgtggac atttacaggg atcatggttt tattgtcctt taaactcttc gatactttac 7020 cattgtctta ctataaatcc aaaatcctaa cgccacccac gaggctttca atacctggct 7080 tcttgtgatt tctccaggct aaccttttac cctccttccc ctcagcctct ctgctttagt 7140 gaactttctc ctagtttttt gaagaagttc atcaattcaa gcttttgtac atgggatttc 7200 ctaaacctga aatgtgcctc ccgttttgtc caaacagaca caggctccac tctgccccct 7260 ggctcacacc tgcttaacct gtcaagtcac atctgaactg tcactcttca gagggtcctt 7320 ctctggcacc ctaatgtaat tgagatcatc ctattattct ctgctctaga acttcccact 7380 tccgagattt ctcattcctg tctaacctct tgtgtgtctg gtttttggcc atcgctttca 7440 ctgctcttta agctccccca gcggagtgga gaggtctgtt ttccctcgtt tggattccta 7500 gaggcagcgc agaccaggca caaggtcagc actaaggaag tgttcacagg atgaacgcgg 7560 tgggtgctgt ttaaggaacc ggtaaacgtg tgggatgaga gaaggagcag agagtgtctt 7620 tggggtggag gctcccagga ggaggcgggg cgggctgcgg tgctgggcgg atcctcctcc 7680 agctcctgct tggaggtctc cagaacaagc tggaggcagg gatggggggt cccaaaagcc 7740 tggggatgag aaggggtttt cccgcatagt cccccaggcc cccgttcgcc tcaggaaaac 7800 ggaggatgag ctcctgggct gctggtggtg ggcgttgcgg gtggggcccg ttaaggttcc 7860 cagtgcccgc accccaccca gggagccccg gatggtggcg tcactgtcag tgtcttctca 7920 ggaggccgcc tgtgtgaccg gagcattcgt gtccccacag cacgtttctt ggagctgctt 7980 aagtctgagt gtcatttctt caatgggacg gagcgggtgc ggttcctgga gagatacttc 8040 cataaccagg aggagttcgt gcgcttcgac agcgacgtgg gggagtaccg ggcggtgacg 8100 gagctggggc ggcctgtcgc cgagtcctgg aacagccaga aggacctcct ggagcagaag 8160 cggggccagg tggacaatta ctgcagacac aactacgggg ttgtgga 8207 // ID KX687298; SV 1; linear; genomic DNA; STD; HUM; 14739 BP. XX AC KX687298; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH25 MHC class II antigen (HLA-DRB4) gene, DE HLA-DRB4*01_03_01_02Ne1 null allele, partial sequence. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-14739 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-14739 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 4306fd8f0fae0402c4a743be784aeb1e. XX FH Key Location/Qualifiers FH FT source 1..14739 FT /organism="Homo sapiens" FT /isolate="IH25" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>14739 FT /gene="HLA-DRB4" FT /allele="HLA-DRB4*01_03_01_02Ne1 null" FT /note="MHC class II antigen" XX SQ Sequence 14739 BP; 4150 A; 2885 C; 3313 G; 4391 T; 0 other; gctagtgaac tcaggtgctg actggttctc caacacgaga ttacccaatc aaggagcaag 60 gaaatcagta acttccttcc tataatttgg aatgtgggtg gaggggggcc atagttctcc 120 ctgattgaga cttgcctgct gctgtgacca ctggtcttgt cctcttctcc agcatggtgt 180 gtctgaagct ccctggaggc tcctgtatgg cagcgctgac agtgacattg acggtgctga 240 gctccccact ggctttggct ggggacaccc aacgtaagtg cacattgtga ctgcagagct 300 actatggggt gggggcaaaa ataggaagtt ttgttaacat tgtgcccagg ctatgtctct 360 tatgaaattg tgacactttc ttcagagatt gcccatcttt atcagatgga tcccaaatta 420 tttccaccac aaaaggcgct tggctacttg tcctgtccat gagatttgtg taaagggcct 480 acacacaggt catttcttct caaatctcca ccaataaaac ctatgcatca catgtcctca 540 gggtctttag aggatttaga aataagtatg ctaaaataat ttccccatac agcacttccc 600 tttattatgt tgacttatgt cagacaaaag gaggttttta ctgaaaattt tgtgggagtc 660 aagggaattc aaagggtctc tcctagacga tccagtgtta tgtcctccac aggacctttg 720 gtgttggccc ctcttcctca tatgtgagga tggatccagt ggcctcccca ttatctcctt 780 tcttttcttt ctgaactcca atgtttataa agcctgtacc cctgttgcct atgtaggttc 840 tctgacaaaa gttatactta gtgctctttc tttcttatgg ggaaaaatcc gtggaactga 900 agctgagatc tttagtacgt ggagtcacct tacagatata gagcatttat gcggtattca 960 ttggtgccta aagaacttta ggcatcctct ggaaaaccgg cccaggttag tgtttattat 1020 gaatcttttt taaccgttct atacttgttt ctcctacatc tcttacgtgc tctaactaga 1080 catgacagaa gagatttaac taatgtagta taaattgtat gaaattctat ttttgtaagt 1140 caaaaataat caaatatcag aaatttaata atgttcaaac tatatactct gtgtggggtt 1200 tttgagacaa tgtggacatt gttcatgtct cataaggctg aaagtcaatg agcaagtcct 1260 ggaaactcat tgtcttactg gggtcttgtc ctaaatttca taggttcacc catcatgccc 1320 tcagctttcc ttaattagcc atgtctgctt acctcttcct ccactttctc tcttttcccc 1380 agctatgttg tcatcatttc caaaaatctc taaagcttgc acagatcctt agcactatga 1440 gatccattga aagacataat ttttttcttt ttgagatagg gcctagctct gtcacccagg 1500 ctgtagctca gtggtgtgat cgaggctcac tgcaaccact gcctcccatg ctcaagcgat 1560 cttccctcct caagctccgg aatagctggg aatagaggca ggcaaccacg cccagctaat 1620 tttttaattt tggtagagat gagattttgc catgttgccc aggctggtct taaactgctg 1680 gactcaagca atcctcctgc cttggcctcc catcgtgcta ggattataga tgtgagccac 1740 tgtgcccagg caaaaagaaa tgactcttaa taaaaaaatt tcctttttct taaatcactg 1800 tttctttatc tgtgaattct tcttccaagt agaaggagga gaaagaagaa gtttgcctgt 1860 atttctcacc gggaggagaa ggggtctagt gtgacatcaa aatgaaaggg tgctggagct 1920 tgagcccctt cttgctttcc gggatcccca cagtgatcag ttctcatacc ctggtttatt 1980 cgtgtaaacc acacttattt ttctcagcag ctactgtgta ctgggctcca ttctaggttc 2040 aaatcattct atttgagtaa gatagagagg gtcccgactc tcaaggaaat tacacaacaa 2100 tagaggagac agacactaac ccaataagca tttaacaaaa aagaaaatgt tagagagtca 2160 tagtgcactg aagaaaagac aacaggtttg tcggaaagat agaaatggat tcacctactt 2220 tagttcatat gtttagggag ccctacctga gaaagtgaca ttcagctgag acaacaaagt 2280 aagtagacag tcgtgaagat ctaatggaca aaagttccag ggagactgaa tcgagggaaa 2340 gccctggtgt gggaaattat gtggagggag agaaagaagg ctagaggggc tgatgtatag 2400 gaagcaagga aatagggggg cagaagatga ggtagaacac agagaggaag tcaggagcct 2460 cctcatatta ggctctgaaa tccacggtaa aaaatttgaa tttcatttat ttatttattt 2520 tgagacagag tttcattctt gtggcccaga ctggagtgca atggcacaat ctcggctcac 2580 tgcaacctcc gcctcctggg ttcaagtgat tctcctgcct cagcttccca agtagctggg 2640 attacaggca cccaccacca tacctggcta tttttttgta tttttagtgg agatggggta 2700 tcaccatgtt gaccaggctg gtctcgaact cctgacctca gataatctgt ctgccttggc 2760 ctcccaaagt gctgggatta caagagtggg ccactgtgcc cagactgaat tttatttaaa 2820 tagatatgag aaactactgt acggttacac ggagagtcaa tttatattca attttgtgtg 2880 tgtgtgtttg tgagatcgag tcttgctctg ttgcccaggc tagattgcag tggcacaatc 2940 tcggtttact gcaacctccg cctcccgggt tcaagcgatt ctattgcctc agcctcccga 3000 gtaactggga ccacaggcgc atgccactac acctggctaa ttttttgtat ttttaatagg 3060 gatgaggttt caccgtgtta gccaggttgg tctcgatctc ctgacctcgt gatctgccca 3120 ccttggcctc ccaaagtgct gggattacag gcgtgagcca ctgcacccgg cctatattca 3180 atttttaaaa ctaactctag ctactctgta ggaattggat tgttggggtt caaaagtggt 3240 caggaagact atttaggagc acagcagaga attatccagg gaaaacaggc ttgtggcttc 3300 atggagtgca ttagtgataa agagagtgaa aaagataaag tggacagact tggcatgtat 3360 ttttgcttag cttgctaatg aattactgta aaggggttag aacaatcaag cttattccta 3420 aggattttgt tttgacaaat aagtgggtgg tagtgttgtt tattgagata ggaaaaacta 3480 tgggaggaaa tgatttgaag tgggtggttg gaaataaaag ttttgtttaa atttgagatg 3540 atttattgac atttatgtgg agcaatcaga aggtcaatgg catttaagag actcatggtg 3600 aggtgaagct agggcttcag gtatttatgt tggcggcatc aataagtgta gtgtgttaaa 3660 ttccagggag tgtaagatga tacataggga gatggattgt gtggagaaaa aagaagaggg 3720 tacaggccag caaagggggc tgagaaagag cccagggagg ctggagaaaa cccaagataa 3780 cataatgcgt gtaagtgaag aaaaacagat tattttcaag gagaagggag aggccaattg 3840 tggtgagtac cactaagagg agagggaagt gagaacgtga cagagaagca agtgctgggt 3900 tgctggtttg ctggagttga tatttgcagt caatggagta tccagggagg aaactggatt 3960 ggaccatttg aagagcaagt agaagtgagg acgaagttaa gattgactgt tttgagtaga 4020 gagcttcagg gaaggactgt gctctgggtt cagggagcca gctgattcta aaggaaaagg 4080 ctaaagaagc tgaagagcca gctttcccag caccatttat taaataggga atcctttccc 4140 catttctgtt ttttgtcaga tttatcaaac atcagatggt tgtagatgtg tggtattatt 4200 tctgagggct ctgttctgtt ccattggtct atatctctgt tttggtacca gtaccatgct 4260 gttttggtta ctgtaggctt gtagtacagt ttgaagtcag gcagcatgat gcctccagct 4320 ttgttctttt ggcttaggat tgtcttggca atgcgggctc ttttttggtt ccatatgaat 4380 tttaaagtag ttttttgcaa ttctgtgaag aaagtcattg gtagcttgat gtggatggca 4440 ctgaatctat aaattacctt gggcagtatg gccattttca cgatatttat tcttcttatc 4500 catgagcatg gaatgttctt ccatttgttt gtgtcctctt ttatttagtt gagcagtggt 4560 ttgtagttct ccttgaagag gcccttcacg tcccttgtaa gttggattcc taggtattct 4620 atactctttg aagcaactgt gaatgggagt tcactcatga tttggctctc tgtttgtctg 4680 ttattggtgt ataagaatgc ttgtgatttt ttgcacatat gtagaaagct aaaactggat 4740 cctttcttta cacctcatac aaaaattaat tcaagatgga ttaaagactt aaatgttaga 4800 cttaaaacca taaaaaccct agaagaaaac ctaggcaata ccattcggga cataggcatg 4860 ggcaaggact tcatgtctaa aacaccaaaa gcaatggcaa caaaagccaa aatggacaaa 4920 tgggatctga ttaaactaaa gagcttctgc acagcaaaag aaaataccat cagagtcaac 4980 aggcaaccta cagaatggga gaaaattttt gcaatctact catctgacaa agggctaata 5040 tccagaatct acaaagaact caaacaaatt tacaagaaaa aaacaaacaa ccccatccaa 5100 aagtgggcaa aggatatgaa cagacacttc tcaaaagaag acatttatgc agccaacaga 5160 cacatgaaaa aatgctcatc atcactggcc atcagagaaa tgcaaatcaa aaccacaatg 5220 agataccatc tcacaccagt tacaatggca ttcattaaaa agtcaggaaa caacaggtgc 5280 tagagaggat gtggagaaat aggaacactt ttacactgtt ggtgggactg taaacgagtt 5340 caaccattgt ggaagacagt gtggtgattc cttaaggatc tagaactaga aatactgttt 5400 gacccagcca tcccattact gggtatatac ccaaaggatt ataaatcatg ctgctataaa 5460 gacacatgca cacgtatgtt tattgtggca ctattcacaa tagcaaagac ttggaaccaa 5520 cccaaatgtc catcaatgat agactggatg aagaaaatgt ggcacataca caccatggaa 5580 tactatgcag ccataaaaaa ggatgagttc atgtcctttg tagggacatg gatgaagctg 5640 gaaaccataa ttctcagcaa actatcacaa gcagaaaaaa accaaacacc acatgttctc 5700 actcataggt gggaattgaa caatgagaac acttggacac aggaagagga acatcacaca 5760 ccggggggag gggggaggga tagcattagg agatatgcat aatgtaaatg acgagttaat 5820 gggtgcagca caccaacacg gcacatgtat atgtgtgtaa caaacctgca cattgtgcac 5880 atgtacccta gaacttaaag tataataaaa aataaataaa taaataaata aataaataaa 5940 taaataaaaa gaagctgaag agaaggagga ggacttgtga accagagatg ctcagtcatt 6000 attagcgagg aaatgctaga gagcccctgt gtgcagtgct gactacttat gcaaaaggtc 6060 acacagccaa tatttaacgc agccagtatt tcacacagcc aatatttatt aatgacatag 6120 catacatata ccagttatta ctctaggtca tgagaatgga gtgataaata aaatgaatct 6180 ggtcgccatc agtatatgcc aggtaacatt ttgcagtgac tgtgtaccag gcctatgatt 6240 ttcagtatgc aatttcaata attatcctgt tgtatctgtg gtatttaaaa aacatataca 6300 tctctggaat ctaaaattga gaggatataa gtaaaaccca gtgttacaaa tttagtgctg 6360 gaaatcagat tgcagtttaa atctgagcat gtagaaagtc cctttcttct atgtcagcag 6420 atgccttttg tgtgaggttt aggtatactg ctttattaga cataaaccag tgtttctgcc 6480 ctatgttttc agaatgacaa ttccttatga aactaataga agaacagaag acaattgcaa 6540 aatcatgatg aagatactaa ttactctaga attcaggaat acataaaatg atgtgagctg 6600 cagttatagg gatcataaaa gttaaaatgg gaatgcattt gagtgtttat tatgtgatca 6660 gtgctaataa gagtcatcat ttaattttac acttaacagt aatcctgtga ggattacgct 6720 attattaaat gcatttgata gattacaaaa aggattatgg ttggtaaaaa ttgccccaag 6780 tagaagagat catgtttttt attcaggtta tctgattcta gagtttgaga gtttgactga 6840 ccatcattag tgagtagtga ctatattgtg tctgaattat tgacagaatt tctgatattc 6900 aaatgtacca ggttgcttct tagagtgcag acagagatgc aagggctgct agttccgatg 6960 tataggagaa actttcattc atttcacatt tatcatttta aaagttctgt atgtctataa 7020 tggtcatgtg ttgaagaaca caaggaagta ttaaatcact ccttcttctg aggtttgact 7080 agcaagttgg gctagagtta ccaaataaaa tacatgttcc tagttaaatc tgaatttcag 7140 atacacaacc atgatttctt ggaaattcaa atttacctgg gcatcctctg gttttatttg 7200 ccaaatctgt caaccctaag tgagacacat ggacatggat tacagtgcta gtcatgcaaa 7260 ccacagtgac agcaacttca cacatgttta ttttttaact ttctgtctgt aaagaaagta 7320 cttagataat ttagggataa aaagatagac attgttttat ccagggtgca cacctctctg 7380 ccatcatttc taaagggcaa agggacattt ctgcaggtct tgctcacagt ctggggacct 7440 gctcgttttt gcaaactgtc tgtatgagta tgtcattttc ttggtttctc cctttctaag 7500 gggacttgac tgcaaaacca ggagttctgc ctctggccaa ggctggaaat ttgatgcctg 7560 ctggtattgt tgggagtggg agactgaaag aaatgagtta gttggggcat caaatgggaa 7620 ataaaatagc tgtggttgtg attcattatt acagaaaatt agtggaccag tggcagagaa 7680 attaagaaaa aagatgatgt gaatgataaa cgatatgatt agtggctact tggtaaggca 7740 aggaaatcat taaatcttgg ttctcatcaa gttcattttc tgaaaagata gcactgtatt 7800 gggaccagaa ttctacaaaa cattcttttt atgtaggacc aagattttca acaaatattt 7860 ttcaatgcaa ttctcagcgc tccataacta atagtagctt gttcaacaca gattttttcg 7920 gatggttcac acctgtagtt cttacccagg gatagttcac cacccctccc ttccctccca 7980 tcatcgttgg tgaacggtgg caatgtttgg aacaattttt ggttgtcaca acaggggttt 8040 cttctgatat tcaatgagta gaagccaggg acactgctaa agaacctaca atattcagaa 8100 cagcctctgc tatcaacaag gaattatctg gtccaaaatg tcaatagtgc tgaggctaag 8160 agcactggtt cacactgtgc tctttctgaa aattctaggc tcacatctgg tatacactca 8220 ccacacagtt cagtttttta tggtttattt ttggttgttt cattataaaa aattagacag 8280 ttacataaat tcaaccattt tcttgttgaa tccatttagt caatgcaagc ttaatatttt 8340 catatttatt ttttgcctta tgcaatattt ttcaacattt tcatgagttg ttggtcatca 8400 ctatctctat taactttcaa caacttgctc ttgtaagtca caaatagtga tgctgctgaa 8460 actgtttctc actaacaggc ctcagatttg tgtagtgatt ctacatttta tattattcac 8520 aatgtaaaat gctactattt attcatttca cttttaccca caggattatt ttaagttatt 8580 ttttgtcatt ttcacacttc aaacataaag acaaaaacat caaaaatata tacagtgttt 8640 tacatatgtg tatattttca catatatctg tatgtgtgtt tatatgtatt gaaactacag 8700 aagcacatgt caccaataag agctctgaga cacctttgac cacttaccct tatcagatga 8760 tatttgccaa atgagttgtg gaaacaagtt ttttttaact gaatttcaga gctttgtgga 8820 tttagaaatt caaaggaaag tttgtggaca tttaccggga tcatggtttt attctcctta 8880 aaactcttca atactttacc attgtcttta gttaaatcca aaatcctaac accacccacg 8940 aggcttttca atacctgcct tcttgtgatt tctccagcct aatcttttac cttccttccc 9000 ctcagcctct ctgctttagt gaactttgtt ctagtttttt gaagaagctc atcaattcaa 9060 ccttttgtac atgggatttc ctaaacctga aaatgtgcct cccgttttgt ccagacagac 9120 acacaggctc catccactct gccccctggc tctcacctgc ttaacctgtc aagtcacatc 9180 tgaactgtca ctcttcagag ggtccttctc tggcacccta atgtaattga gatcatcctt 9240 ttattctctg ttccagaact ccacacttct gacgtttctc attcctgtct aagctcttgt 9300 gtgtttggtt tttggccatc acgttcactg ctctttaagc tcccccagcg gagtggagag 9360 gtctgttttc ctttgtttgg attcctagag gcagcgcaga ccaggcacaa ggtcagcact 9420 aaggaagggt tcacgggatg aacacggtgg gtgctgttga aggaaccggt aaagcgtgtg 9480 ggatgagagg agcagagagt gtctttcagg tgaagactcc cagaaggagg ccgcgtgggc 9540 cgcggtgctg ggcggatcct cctccagctc ctgcttggag ttctccagaa caggctggag 9600 gcagggaggg ggtccccaaa agcctgagga tcagaagggg ttttcccgcc tggtccccca 9660 gaccccggtt cgcctcagga agactgagga cgagcccctg ggctgctggt ggtgggcgtt 9720 gcgggtgggg ccggttaagg ttcccagcgc ccgcaccccg cccagggagt ccgggttggt 9780 ggcgtcgctg tcagtgtctt ctcaggaggc cgcccgtgtg accggatcgt tcgtgtcccc 9840 acaacacgtt tcttggagca ggctaagtgt gagtgtcatt tcctcaatgg gacggagcga 9900 gtgtggaacc tgatcagata catctataac caagaggagt acgcgcgcta caacagtgac 9960 ctgggggagt accaggcggt gacggagctg gggcggcctg acgctgagta ctggaacagc 10020 cagaaggacc tcctggagcg gaggcgggcc gaggtggaca cctactgcag atacaactac 10080 ggggttgtgg agagcttcac agtgcagcgg cgaggtgagc atggtggagg gcggggcctg 10140 ggtccctgtg agcggggaat ctgtgtatgt gtgtgtgtgt gtgtgtgtga gagagagaga 10200 gagagacaga ggaagagaga gagagcgtgc gccatctgtg agcatttaga atcctctcta 10260 tcctttctta tggctgcgta gtattccctg gtgtataggt gccacattgt cttaatccag 10320 tctatcattg atggacatta gggttaattc caagtctttg ctattgtgaa tagtgtcagt 10380 tcatgtcctt tgtagggaca tggatgcagc tggaaaccat cattctcagc aaactatcac 10440 aaggacagaa aaccaaacac cacttgttct cactcatagg tgggaattga acaatgagaa 10500 cacatggaca caggaagggg aacatcacac acaggggcct gtcgtggggt ggggggagca 10560 gggagtgata gcattaggag atatacctaa tgtaaatgac tagttaatgg gtgcagcata 10620 ccaacatgac acatgtgtac atatgtaaca aacctgcacg ttgtgcacat gtatcctaga 10680 acttaaagta taataataat aattatatat atatatatat tagaaaaaca aacaaaaaga 10740 atcttctgta tcctgagcaa ggagttctga aggcacaggt gtgtgtagag tgtggatttg 10800 tctgtgtggc tgttgtggga ggggaaacag gagggggctg cttcttattc ttggaggcct 10860 ctgtgcagag gtgacatggg aggtgggtgt agggggctgg agagagagga gaccttgatt 10920 gtcctgggtc cttagagatg cagggaaggg aagaataagg tgtgtgtggt tggggtgaag 10980 gtttagggga ggagagctga ggagtgtgga aggtttggga taatgtgagg aggccagttc 11040 cagactgtcc ctggcacaca cccttcatgt aatctctgaa ataaaagtgt gtgctgtttg 11100 tttgtaaaag cattagatta atttctaggg gaattgagga gacctctgag gcacctctga 11160 agcttcttta ggtctaaatt tcttgctagt ttttgttttt ttagggtgta tatttttaca 11220 tagcagaagt gactgtgaaa ctaacttttt gaattaaagt tttaacacag ttactatttt 11280 attataatgc taatagtttt ctagtagtta catcttattc ttttgtatat aatagttgtg 11340 acacaactta cctcactttc ccctttttgt tgacctttat tatgactttc accaaaagtt 11400 gaaaatgtat gtttctggtt aatttttact ttatattttt catttgtaat tcttttgaat 11460 tattttgacc tatttattgg ccaattataa ttactgctgt aagaattccc tatttcattt 11520 ggtagggaat gtacaatgat ctactgtcta atatcttaag ggcttagtat ttttctcagt 11580 gactttgtgg gttctttgta ctgtaagatt attaacactt tattgatatt tgattcagca 11640 ttttctccag tttgtggttt gtatgtggat tttgaaaagt attttccatg ttaagaattt 11700 gaacattttt atttaataaa atatattgcg aaatttgtat taatgattta caatcatctt 11760 aaatccacca ttttgtggta ttattgtctc caggtttctc cttacttcta aaaaaaaact 11820 gtatttattg agagtatgct agtgtcaggg attttcctgg gcataagcac cccaagtgac 11880 gagtcccaga cactgcctta atccaaatgt cattctggaa agaaaaatca ttttacaatg 11940 ataggcctaa taataattaa gcttgtgttg cacaggagat acattgatca gctaaatgta 12000 aacgtaagaa ctttcaaaac taaaatgaca ttccttaatc attctctctg cgttaggact 12060 catgcttttc taggaacgta aaaatttgag aatcatttct gtctgtccca ccttcccagg 12120 ggcagaacca tttctgtggt gttctaaggt gtgagtgcat ggtggtagta ttcccaaaaa 12180 ttcatactcg gtttcctcat gtacccaact ctgtcccttt atctacccac attgctttaa 12240 gtcatatttt tctgtcacgg tgtacaagga tgataaatag gtgccaagtg gagcacccaa 12300 gtgtgatgag ccccctcaca gtggaatgga gtgacaagct ttctaacctc ataaattgaa 12360 ggctatcttc agtcattgtt ttatatattt tacgtgcatt aatcctcata taaccccaag 12420 aggtaaatta gtataattat ccttcattgt aggtgacaaa gttgagacac agaagaatca 12480 aaaaactctt ccagcatcaa ccagtaaaag gcagaccttg gatttcaacc aggcaacatg 12540 gctcagatat cagttttaat tactacactc tactgtcaaa gatttgtaaa cactttgaca 12600 atgcatgcca atttcaagct atgaagaaac aaacacaatt tttcacaaca tctctcaaat 12660 ctaatgggtc ctcactatca agattaaatt ccaggctgat gacactgtaa ggccacatgg 12720 ccagctgtgc tggaggcctg gtcaaggtca gagcctgggt ttgcagagaa gcagacaaac 12780 agccaaacaa ggagacttac tctgtcttca tgactcattc ccactacctt ttttttctcc 12840 tagtccaacc taaggtgact gtgtatcctt caaagaccca gcccctgcag caccacaacc 12900 tcctggtctg ctctgtgaat ggtttctatc caggcagcat tgaagtcagg tggttccgga 12960 acggccagga agagaaggct ggggtggtgt ccacaggcct gatccagaat ggagactgga 13020 ccttccagac cctggtgatg ctggaaacag ttcctcggag tggagaggtt tacacctgcc 13080 aagtggagca tccaagcatg atgagccctc tcacggtgca atggagttag cagctttctg 13140 acttcctaaa tttctcaccc accaagaagg ggactgtgct aatccctgag tgtcaggttt 13200 ctcctctccc acatcctatt ttcatttgct ccatgttctc atctccatca gcacaggtca 13260 ctgggctact gggggtagcc ctgtaggtgt ttctagaaac acctgtaccc cctggggaat 13320 cagtcacgcc tgccaggcgg gagaggctgt ccctcttttg aacctcccca tgatgtccca 13380 gttcagggtc acccactctc cccaggctcc aggccctgcc tctgggtctg agactgcgtt 13440 tctggtgctg ttgatctgag ttgtttgttg tgagaagagg agaactctag gggccttcct 13500 gacatgaggg gagtccaatc tcaactctgc cttttattag ctctgtcact ctagacaaac 13560 tacttaacct cactgagact caggctttct gttgatcaga ttttgaagtt gcgccttaca 13620 tcaaggctgt aatatttgaa atgagtttga tgcctggacc ttgtaactgt tacagtgtga 13680 tttgaaaacc gttttttccc ccagaaatgg ctagttattt tagttcttac agggcagcct 13740 tctttcccat tttgaaagct ctgaatctta gggtctcaat tacagaggtt caatttggaa 13800 taaacactaa acctggcttc ctctctcagg tgcacggtct gaatctgcac agagcaagat 13860 gctgagtgga gtcgggggct ttgtgctggg cctgctcttc cttgggacag ggctgttcat 13920 ctacttcagg aatcagaaag gtgaggagct tttgggagct gaatctccat aggcttttct 13980 ggaggaggaa ctatgacttt gctagggtta gttctcagta tatcagtggc cctggataaa 14040 gcctttcttt ccccaaatga cctccaatgt cctgataatc cagaaatcat cagtgcatgg 14100 ttactatgtc aaagcataat agcttgtggc ctgcagagat aagagaaagg ttaacaagta 14160 gggattcttt ggttggagat cctggagcaa attaaggaag agccactaag gctaatgcaa 14220 ttacgctgga tcctgtgaca gacacctcat gcttcatggg tcacatggtc tgtttctgtt 14280 cctctctgcc ctggttggtg tgggttgtgg tgttagagaa atctcaggtg ggagatctgg 14340 ggctgggaca ttgtgttaga agacagattt gcttccatat cttttaagtg tatatctttt 14400 cctctttttc ccaggacact ctggacttca gccaacaggt aatacctttt aatcctcttt 14460 cagaaagaga ttcagtttcc ctagaatgat ggcagaggtg ataaggcatg agacagaaat 14520 aataggaaag actttggatc cagatttctg atcaggcaat ttaccccaga actcctcctc 14580 tccacttaga aaaggcctgt gctttgcagg atcattggct cagggagact taggaacttg 14640 tttttcttct ccctgcagtg ctctcatctg agtcggtgaa agcggggaaa agaagtttta 14700 gtaaagccag gtctgaaaac aatttcctct gtctctgca 14739 // ID KX687299; SV 1; linear; genomic DNA; STD; HUM; 5148 BP. XX AC KX687299; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH32 MHC class II antigen (HLA-DRB4) gene, DE HLA-DRB4*01_03_01_01v1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5148 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-5148 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 42d1dfc5a9adb27bb1606d11ed666f94. XX FH Key Location/Qualifiers FH FT source 1..5148 FT /organism="Homo sapiens" FT /isolate="IH32" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <244..>4847 FT /gene="HLA-DRB4" FT /allele="HLA-DRB4*01_03_01_01v1" FT mRNA join(<244..513,3253..3534,4239..4349,4824..>4847) FT /gene="HLA-DRB4" FT /allele="HLA-DRB4*01_03_01_01v1" FT /product="MHC class II antigen" FT CDS join(<244..513,3253..3534,4239..4349,4824..>4847) FT /codon_start=3 FT /gene="HLA-DRB4" FT /allele="HLA-DRB4*01_03_01_01v1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1B3" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1B3" FT /protein_id="AST15811.1" FT /translation="RFLEQAKCECHFLNGTERVWNLIRYIYNQEEYARYNSDLGEYQAV FT TELGRPDAEYWNSQKDLLERRRAEVDTYCRYNYGVVESFTVQRRVQPKVTVYPSKTQPL FT QHHNLLVCSVNGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSMMSPLTVQWSARSESAQSKMLSGVGGFVLGLLFLGTGLFIYFRNQKGH FT SGLQPT" XX SQ Sequence 5148 BP; 1330 A; 1054 C; 1255 G; 1509 T; 0 other; cagggagggg gtccccaaaa gcctgaggat cagaaggggt tttcccgcct ggtcccccag 60 accccggttc gcctcaggaa gactgaggac gagcccctgg gctgctggtg gtgggcgttg 120 cgggtggggc cggttaaggt tcccagcgcc cgcaccccgc ccagggagtc cgggttggtg 180 gcgtcgctgt cagtgtcttc tcaggaggcc gcccgtgtga ccggatcgtt cgtgtcccca 240 cagcacgttt cttggagcag gctaagtgtg agtgtcattt cctcaatggg acggagcgag 300 tgtggaacct gatcagatac atctataacc aagaggagta cgcgcgctac aacagtgacc 360 tgggggagta ccaggcggtg acggagctgg ggcggcctga cgctgagtac tggaacagcc 420 agaaggacct cctggagcgg aggcgggccg aggtggacac ctactgcaga tacaactacg 480 gggttgtgga gagcttcaca gtgcagcggc gaggtgagca tggtggaggg cggggcctgg 540 gtccctgtga gcggggaatc tgtgtatgtg tgtgtgtgtg tgtgtgtgag agagagagag 600 agagagagag agagacagag aaagagagag agagcgtgcg ccatctgtga gcatttagaa 660 tcctctctat cctttcttat ggctgcgcag tattccctgg tgtataggtg ccacattgtc 720 ttaatccagt ctatcattga tggacattag ggttaattcc aagtctttgc tattgtgaat 780 agtgtcagtt catgtccttt gtagggacat ggatgcagct ggaaaccatc attctcagca 840 aactatcaca aggacagaaa accaaacacc acttgttctc actcataggt gggaattgaa 900 caatgagaac acatggacac aggaagggga acatcacaca caggggcctg tcgtggggtg 960 gggggagcag ggagtgatag cattaggaga tatacctaat gtaaatgact agttaatggg 1020 tgcagcatac caacatgaca catgtgtaca tatgtaacaa acctgcacgt tgtgcacatg 1080 tatcctagaa cttaaagtat aataataata attatatata tatatatatt agaaaaacaa 1140 acaaaaagaa tcttctgtat cctgagcaag gagttctgaa ggcacaggtg tgtgtagagt 1200 gtggatttgt ctgtgtggct gttgtgggag gggaaacagg agggggctgc ttcttattct 1260 tggaggcctc tgtgcagagg tgacatggga ggtgggtgta gggggctgga gagagaggag 1320 accttgattg tcctgggtcc ttagagatgc agggaaggga agaataaggt gtgtgtggtt 1380 ggggtgaagg tttaggggag gagagctgag gagtgtggaa ggtttgggat aatgtgagga 1440 ggccagttcc agactgtccc tggcacacac ccttcatgta atctctgaaa taaaagtgtg 1500 tgctgtttgt ttgtaaaagc attagattaa tttctagggg aattgaggag acctctgagg 1560 cacctctgaa gcttctttag gtctaaattt cttgctagtt tttgtttttt tagggtgtat 1620 atttttacat agcagaagtg actgtgaaac taactttttg aattaaagtt ttaacacagt 1680 tactatttta ttataatgct aatagttttc tagtagttac atcttattct tttgtatata 1740 atagttgtga cacaacttac ctcactttcc cctttttgtt gacctttatt atgactttca 1800 ccaaaagttg aaaatgtatg tttctggtta atttttactt tatatttttc atttgtaatt 1860 cttttgaatt attttgacct atttattggc caattataat tactgctgta agaattccct 1920 atttcatttg gtagggaatg tacaatgatc tactgtctaa tatcttaagg gcttagtatt 1980 tttctcagtg actttgtggg ttctttgtac tgtaagatta ttaacacttt attgatattt 2040 gattcagcat tttctccagt ttgtggtttg tatgtggatt ttgaaaagta ttttccatgt 2100 taagaatttg aacattttta tttaataaaa tatattgcga aatttgtatt aatgatttac 2160 aatcatctta aatccaccat tttgtggtat tattgtctcc aggtttctcc ttacttctaa 2220 aaaaaaactg tatttattga gagtatgcta gtgtcaggga ttttcctggg cataagcacc 2280 ccaagtgacg agtcccagac actgccttaa tccaaatgtc attctggaaa gaaaaatcat 2340 tttacaatga taggcctaat aataattaag cttgtgttgc acaggagata cattgatcag 2400 ctaaatgtaa acgtaagaac tttcaaaact aaaatgacat tccttaatca ttctctctgc 2460 gttaggactc atgcttttct aggaacgtaa aaatttgaga atcatttctg tctgtcccac 2520 cttcccaggg gcagaaccat ttctgtggtg ttctaaggtg tgagtgcatg gtggtagtat 2580 tcccaaaaat tcatactcgg tttcctcatg tacccaactc tgtcccttta tctacccaca 2640 ttgctttaag tcatattttt ctgtcacggt gtacaaggat gataaatagg tgccaagtgg 2700 agcacccaag tgtgatgagc cccctcacag tggaatggag tgacaagctt tctaacctca 2760 taaattgaag gctatcttca gtcattgttt tatatatttt acgtgcatta atcctcatat 2820 aaccccaaga ggtaaattag tataattatc cttcattgta ggtgacaaag ttgagacaca 2880 gaagaatcaa aaaactcttc cagcatcaac cagtaaaagg cagaccttgg atttcaacca 2940 ggcaacatgg ctcagatatc agttttaatt actacactct actgtcaaag atttgtaaac 3000 actttgacaa tgcatgccaa tttcaagcta tgaagaaaca aacacaattt ttcacaacat 3060 ctctcaaatc taatgggtcc tcactatcaa gattaaattc caggctgatg acactgtaag 3120 gccacatggc cagctgtgct ggaggcctgg tcaaggtcag agcctgggtt tgcagagaag 3180 cagacaaaca gccaaacaag gagacttact ctgtcttcat gactcattcc cactaccttt 3240 tttttctcct agtccaacct aaggtgactg tgtatccttc aaagacccag cccctgcagc 3300 accacaacct cctggtctgc tctgtgaatg gtttctatcc aggcagcatt gaagtcaggt 3360 ggttccggaa cggccaggaa gagaaggctg gggtggtgtc cacaggcctg atccagaatg 3420 gagactggac cttccagacc ctggtgatgc tggaaacagt tcctcggagt ggagaggttt 3480 acacctgcca agtggagcat ccaagcatga tgagccctct cacggtgcaa tggagttagc 3540 agctttctga cttcctaaat ttctcaccca ccaagaaggg gactgtgcta atccctgagt 3600 gtcaggtttc tcctctccca catcctattt tcatttgctc catgttctca tctccatcag 3660 cacaggtcac tgggctactg ggggtagccc tgtaggtgtt tctagaaaca cctgtacccc 3720 ctggggaatc agtcacgcct gccaggcggg agaggctgtc cctcttttga acctccccat 3780 gatgtcccag ttcagggtca cccactctcc ccaggctcca ggccctgcct ctgggtctga 3840 gactgcgttt ctggtgctgt tgatctgagt tgtttgttgt gagaagagga gaactctagg 3900 ggccttcctg acatgagggg agtccaatct caactctgcc ttttattagc tctgtcactc 3960 tagacaaact acttaacctc actgagactc aggctttctg ttgatcagat tttgaagttg 4020 cgccttacat caaggctgta atatttgaaa tgagtttgat gcctggacct tgtaactgtt 4080 acagtgtgat ttgaaaaccg ttttttcccc cagaaatggc tagttatttt agttcttaca 4140 gggcagcctt ctttcccact ttgaaagctc tgaatcttag ggtctcaatt acagaggttc 4200 aatttggaat aaacactaaa cctggcttcc tctctcaggt gcacggtctg aatctgcaca 4260 gagcaagatg ctgagtggag tcgggggctt tgtgctgggc ctgctcttcc ttgggacagg 4320 gctgttcatc tacttcagga atcagaaagg tgaggagctt ttgggagctg aatctccata 4380 ggcttttctg gaggaggaac tatgactttg ctagggttag ttctcagtat atcagtggcc 4440 ctggataaag cctttctttc cccaaatgac ctccaatgtc ctgataatcc agaaatcatc 4500 agtgcatggt tactatgtca aagcataata gcttgtggcc tgcagagata agagaaaggt 4560 taacaagtag ggattctttg gttggagatc ctggagcaaa ttaaggaaga gccactaagg 4620 ctaatgcaat tacgctggat cctgtgacag acacctcatg cttcatgggt cacatggtct 4680 gtttctgttc ctctctgccc tggttggtgt gggttgtggt gttagagaaa tctcaggtgg 4740 gagatctggg gctgggacat tgtgttagaa gacagatttg cttccatatc ttttaagtgt 4800 atatcttttc ctctttttcc caggacactc tggacttcag ccaacaggta atacctttta 4860 atcctctttc agaaagagat tcagtttccc tagaatgatg gcagaggtga taaggcatga 4920 gacagaaata ataggaaaga ctttggatcc agatttctga tcaggcaatt taccccagaa 4980 ctcctcctct ccacttagaa aaggcctgtg ctttgcagga tcattggctc agggagactt 5040 aggaacttgt ttttcttctc cctgcagtgc tctcatctga gtcgttgaaa gcggggaaaa 5100 gaagttttag taaagccagg tctgaaaaca atttcctctg tctctgca 5148 // ID KX687300; SV 1; linear; genomic DNA; STD; HUM; 5143 BP. XX AC KX687300; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate IH15 MHC class II antigen (HLA-DRB4) gene, DE HLA-DRB4*01_03_01_01v2 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5143 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-5143 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 5a896fe52174f16a99f1e28f68d0740c. XX FH Key Location/Qualifiers FH FT source 1..5143 FT /organism="Homo sapiens" FT /isolate="IH15" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <244..>4842 FT /gene="HLA-DRB4" FT /allele="HLA-DRB4*01_03_01_01v2" FT mRNA join(<244..513,3248..3529,4234..4344,4819..>4842) FT /gene="HLA-DRB4" FT /allele="HLA-DRB4*01_03_01_01v2" FT /product="MHC class II antigen" FT CDS join(<244..513,3248..3529,4234..4344,4819..>4842) FT /codon_start=3 FT /gene="HLA-DRB4" FT /allele="HLA-DRB4*01_03_01_01v2" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1C3" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1C3" FT /protein_id="AST15812.1" FT /translation="RFLEQAKCECHFLNGTERVWNLIRYIYNQEEYARYNSDLGEYQAV FT TELGRPDAEYWNSQKDLLERRRAEVDTYCRYNYGVVESFTVQRRVQPKVTVYPSKTQPL FT QHHNLLVCSVNGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSMMSPLTVQWSARSESAQSKMLSGVGGFVLGLLFLGTGLFIYFRNQKGH FT SGLQPT" XX SQ Sequence 5143 BP; 1325 A; 1052 C; 1255 G; 1511 T; 0 other; cagggagggg gtccccaaaa gcctgaggat cagaaggggt tttcccgcct ggtcccccag 60 accccggttc gcctcaggaa gactgaggac gagcccctgg gctgctggtg gtgggcgttg 120 cgggtggggc cggttaaggt tcccagcgcc cgcaccccgc ccagggagtc cgggttggtg 180 gcgtcgctgt cagtgtcttc tcaggaggcc gcccgtgtga ccggatcgtt cgtgtcccca 240 cagcacgttt cttggagcag gctaagtgtg agtgtcattt cctcaatggg acggagcgag 300 tgtggaacct gatcagatac atctataacc aagaggagta cgcgcgctac aacagtgacc 360 tgggggagta ccaggcggtg acggagctgg ggcggcctga cgctgagtac tggaacagcc 420 agaaggacct cctggagcgg aggcgggccg aggtggacac ctactgcaga tacaactacg 480 gggttgtgga gagcttcaca gtgcagcggc gaggtgagca tggtggaggg cggggcctgg 540 gtccctgtga gcggggaatc tgtgtatgtg tgtgtgtgtg tgtgtgtgtg agagagagag 600 agagagagag agacagagga agagagagag agcgtgcgcc atctgtgagc atttagaatc 660 ctctctatcc tttcttatgg ctgcgtagta ttccctggtg tataggtgcc acattgtctt 720 aatccagtct atcattgatg gacattaggg ttaattccaa gtctttgcta ttgtgaatag 780 tgtcagttca tgtcctttgt agggacatgg atgcagctgg aaaccatcat tctcagcaaa 840 ctatcacaag gacagaaaac caaacaccac ttgttctcac tcataggtgg gaattgaaca 900 atgagaacac atggacacag gaaggggaac atcacacaca ggggcctgtc gtggggtggg 960 gggagcaggg agtgatagca ttaggagata tacctaatgt aaatgactag ttaatgggtg 1020 cagcatacca acatgacaca tgtgtacata tgtaacaaac ctgcacgttg tgcacatgta 1080 tcctagaact taaagtataa taataattat atatatatat atattagaaa aacaaacaaa 1140 aagaatcttc tgtatcctga gcaaggagtt ctgaaggcac aggtgtgtgt agagtgtgga 1200 tttgtctgtg tggctgttgt gggaggggaa acaggagggg gctgcttctt attcttggag 1260 gcctctgtgc agaggtgaca tgggaggtgg gtgtaggggg ctggagagag aggagacctt 1320 gattgtcctg ggtccttaga gatgcaggga agggaagaat aaggtgtgtg tggttggggt 1380 gaaggtttag gggaggagag ctgaggagtg tggaaggttt gggataatgt gaggaggcca 1440 gttccagact gtccctggca cacacccttc atgtaatctc tgaaataaaa gtgtgtgctg 1500 tttgtttgta aaagcattag attaatttct aggggaattg aggagacctc tgaggcacct 1560 ctgaagcttc tttaggtcta aatttcttgc tagtttttgt ttttttaggg tgtatatttt 1620 tacatagcag aagtgactgt gaaactaact ttttgaatta aagttttaac acagttacta 1680 ttttattata atgctaatag ttttctagta gttacatctt attcttttgt atataatagt 1740 tgtgacacaa cttacctcac tttccccttt ttgttgacct ttattatgac tttcaccaaa 1800 agttgaaaat gtatgtttct ggttaatttt tactttatat ttttcatttg taattctttt 1860 gaattatttt gacctattta ttggccaatt ataattactg ctgtaagaat tccctatttc 1920 atttggtagg gaatgtacaa tgatctactg tctaatatct taagggctta gtatttttct 1980 cagtgacttt gtgggttctt tgtactgtaa gattattaac actttattga tatttgattc 2040 agcattttct ccagtttgtg gtttgtatgt ggattttgaa aagtattttc catgttaaga 2100 atttgaacat ttttatttaa taaaatatat tgcgaaattt gtattaatga tttacaatca 2160 tcttaaatcc accattttgt ggtattattg tctccaggtt tctccttact tctaaaaaaa 2220 aactgtattt attgagagta tgctagtgtc agggattttc ctgggcataa gcaccccaag 2280 tgacgagtcc cagacactgc cttaatccaa atgtcattct ggaaagaaaa atcattttac 2340 aatgataggc ctaataataa ttaagcttgt gttgcacagg agatacattg atcagctaaa 2400 tgtaaacgta agaactttca aaactaaaat gacattcctt aatcattctc tctgcgttag 2460 gactcatgct tttctaggaa cgtaaaaatt tgagaatcat ttctgtctgt cccaccttcc 2520 caggggcaga accatttctg tggtgttcta aggtgtgagt gcatggtggt agtattccca 2580 aaaattcata ctcggtttcc tcatgtaccc aactctgtcc ctttatctac ccacattgct 2640 ttaagtcata tttttctgtc acggtgtaca aggatgataa ataggtgcca agtggagcac 2700 ccaagtgtga tgagccccct cacagtggaa tggagtgaca agctttctaa cctcataaat 2760 tgaaggctat cttcagtcat tgttttatat attttacgtg cattaatcct catataaccc 2820 caagaggtaa attagtataa ttatccttca ttgtaggtga caaagttgag acacagaaga 2880 atcaaaaaac tcttccagca tcaaccagta aaaggcagac cttggatttc aaccaggcaa 2940 catggctcag atatcagttt taattactac actctactgt caaagatttg taaacacttt 3000 gacaatgcat gccaatttca agctatgaag aaacaaacac aatttttcac aacatctctc 3060 aaatctaatg ggtcctcact atcaagatta aattccaggc tgatgacact gtaaggccac 3120 atggccagct gtgctggagg cctggtcaag gtcagagcct gggtttgcag agaagcagac 3180 aaacagccaa acaaggagac ttactctgtc ttcatgactc attcccacta cctttttttt 3240 ctcctagtcc aacctaaggt gactgtgtat ccttcaaaga cccagcccct gcagcaccac 3300 aacctcctgg tctgctctgt gaatggtttc tatccaggca gcattgaagt caggtggttc 3360 cggaacggcc aggaagagaa ggctggggtg gtgtccacag gcctgatcca gaatggagac 3420 tggaccttcc agaccctggt gatgctggaa acagttcctc ggagtggaga ggtttacacc 3480 tgccaagtgg agcatccaag catgatgagc cctctcacgg tgcaatggag ttagcagctt 3540 tctgacttcc taaatttctc acccaccaag aaggggactg tgctaatccc tgagtgtcag 3600 gtttctcctc tcccacatcc tattttcatt tgctccatgt tctcatctcc atcagcacag 3660 gtcactgggc tactgggggt agccctgtag gtgtttctag aaacacctgt accccctggg 3720 gaatcagtca cgcctgccag gcgggagagg ctgtccctct tttgaacctc cccatgatgt 3780 cccagttcag ggtcacccac tctccccagg ctccaggccc tgcctctggg tctgagactg 3840 cgtttctggt gctgttgatc tgagttgttt gttgtgagaa gaggagaact ctaggggcct 3900 tcctgacatg aggggagtcc aatctcaact ctgcctttta ttagctctgt cactctagac 3960 aaactactta acctcactga gactcaggct ttctgttgat cagattttga agttgcgcct 4020 tacatcaagg ctgtaatatt tgaaatgagt ttgatgcctg gaccttgtaa ctgttacagt 4080 gtgatttgaa aaccgttttt tcccccagaa atggctagtt attttagttc ttacagggca 4140 gccttctttc ccattttgaa agctctgaat cttagggtct caattacaga ggttcaattt 4200 ggaataaaca ctaaacctgg cttcctctct caggtgcacg gtctgaatct gcacagagca 4260 agatgctgag tggagtcggg ggctttgtgc tgggcctgct cttccttggg acagggctgt 4320 tcatctactt caggaatcag aaaggtgagg agcttttggg agctgaatct ccataggctt 4380 ttctggagga ggaactatga ctttgctagg gttagttctc agtatatcag tggccctgga 4440 taaagccttt ctttccccaa atgacctcca atgtcctgat aatccagaaa tcatcagtgc 4500 atggttacta tgtcaaagca taatagcttg tggcctgcag agataagaga aaggttaaca 4560 agtagggatt ctttggttgg agatcctgga gcaaattaag gaagagccac taaggctaat 4620 gcaattacgc tggatcctgt gacagacacc tcatgcttca tgggtcacat ggtctgtttc 4680 tgttcctctc tgccctggtt ggtgtgggtt gtggtgttag agaaatctca ggtgggagat 4740 ctggggctgg gacattgtgt tagaagacag atttgcttcc atatctttta agtgtatatc 4800 ttttcctctt tttcccagga cactctggac ttcagccaac aggtaatacc ttttaatcct 4860 ctttcagaaa gagattcagt ttccctagaa tgatggcaga ggtgataagg catgagacag 4920 aaataatagg aaagactttg gatccagatt tctgatcagg caatttaccc cagaactcct 4980 cctctccact tagaaaaggc ctgtgctttg caggatcatt ggctcaggga gacttaggaa 5040 cttgtttttc ttctccctgc agtgctctca tctgagtcgt tgaaagcggg gaaaagaagt 5100 tttagtaaag ccaggtctga aaacaatttc ctctgtctct gca 5143 // ID KX687301; SV 1; linear; genomic DNA; STD; HUM; 5146 BP. XX AC KX687301; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate CL1 MHC class II antigen (HLA-DRB4) gene, DE HLA-DRB4*01_03_01_01v3 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5146 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-5146 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 6598b4628fcb8c76214547354b7f6c6b. XX FH Key Location/Qualifiers FH FT source 1..5146 FT /organism="Homo sapiens" FT /isolate="CL1" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <244..>4845 FT /gene="HLA-DRB4" FT /allele="HLA-DRB4*01_03_01_01v3" FT mRNA join(<244..513,3251..3532,4237..4347,4822..>4845) FT /gene="HLA-DRB4" FT /allele="HLA-DRB4*01_03_01_01v3" FT /product="MHC class II antigen" FT CDS join(<244..513,3251..3532,4237..4347,4822..>4845) FT /codon_start=3 FT /gene="HLA-DRB4" FT /allele="HLA-DRB4*01_03_01_01v3" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1E1" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1E1" FT /protein_id="AST15813.1" FT /translation="RFLEQAKCECHFLNGTERVWNLIRYIYNQEEYARYNSDLGEYQAV FT TELGRPDAEYWNSQKDLLERRRAEVDTYCRYNYGVVESFTVQRRVQPKVTVYPSKTQPL FT QHHNLLVCSVNGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSMMSPLTVQWSARSESAQSKMLSGVGGFVLGLLFLGTGLFIYFRNQKGH FT SGLQPT" XX SQ Sequence 5146 BP; 1325 A; 1052 C; 1257 G; 1512 T; 0 other; cagggagggg gtccccaaaa gcctgaggat cagaaggggt tttcccgcct ggtcccccag 60 accccggttc gcctcaggaa gactgaggac gagcccctgg gctgctggtg gtgggcgttg 120 cgggtggggc cggttaaggt tcccagcgcc cgcaccccgc ccagggagtc cgggttggtg 180 gcgtcgctgt cagtgtcttc tcaggaggcc gcccgtgtga ccggatcgtt cgtgtcccca 240 cagcacgttt cttggagcag gctaagtgtg agtgtcattt cctcaatggg acggagcgag 300 tgtggaacct gatcagatac atctataacc aagaggagta cgcgcgctac aacagtgacc 360 tgggggagta ccaggcggtg acggagctgg ggcggcctga cgctgagtac tggaacagcc 420 agaaggacct cctggagcgg aggcgggccg aggtggacac ctactgcaga tacaactacg 480 gggttgtgga gagcttcaca gtgcagcggc gaggtgagca tggtggaggg cggggcctgg 540 gtccctgtga gcggggaatc tgtgtatgtg tgtgtgtgtg tgtgtgtgtg agagagagag 600 agagagagag agacagagga agagagagag agcgtgcgcc atctgtgagc atttagaatc 660 ctctctatcc tttcttatgg ctgcgtagta ttccctggtg tataggtgcc acattgtctt 720 aatccagtct atcattgatg gacattaggg ttaattccaa gtctttgcta ttgtgaatag 780 tgtcagttca tgtcctttgt agggacatgg atgcagctgg aaaccatcat tctcagcaaa 840 ctatcacaag gacagaaaac caaacaccac ttgttctcac tcataggtgg gaattgaaca 900 atgagaacac atggacacag gaaggggaac atcacacaca ggggcctgtc gtggggtggg 960 gggagcaggg agtgatagca ttaggagata tacctaatgt aaatgactag ttaatgggtg 1020 cagcatacca acatgacaca tgtgtacata tgtaacaaac ctgcacgttg tgcacatgta 1080 tcctagaact taaagtataa taataataat tatatatata tatatattag aaaaacaaac 1140 aaaaagaatc ttctgtatcc tgagcaagga gttctgaagg cacaggtgtg tgtagagtgt 1200 ggatttgtct gtgtggctgt tgtgggaggg gaaacaggag ggggctgctt cttattcttg 1260 gaggcctctg tgcagaggtg acatgggagg tgggtgtagg gggctggaga gagaggagac 1320 cttgattgtc ctgggtcctt agagatgcag ggaagggaag aataaggtgt gtgtggttgg 1380 ggtgaaggtt taggggagga gagctgagga gtgtggaagg tttgggataa tgtgaggagg 1440 ccagttccag actgtccctg gcacacaccc ttcatgtaat ctctgaaata aaagtgtgtg 1500 ctgtttgttt gtaaaagcat tagattaatt tctaggggaa ttgaggagac ctctgaggca 1560 cctctgaagc ttctttaggt ctaaatttct tgctagtttt tgttttttta gggtgtgtat 1620 ttttacatag cagaagtgac tgtgaaacta actttttgaa ttaaagtttt aacacagtta 1680 ctattttatt ataatgctaa tagttttcta gtagttacat cttattcttt tgtatataat 1740 agttgtgaca caacttacct cactttcccc tttttgttga cctttattat gactttcacc 1800 aaaagttgaa aatgtatgtt tctggttaat ttttacttta tatttttcat ttgtaattct 1860 tttgaattat tttgacctat ttattggcca attataatta ctgctgtaag aattccctat 1920 ttcatttggt agggaatgta caatgatcta ctgtctaata tcttaagggc ttagtatttt 1980 tctcagtgac tttgtgggtt ctttgtactg taagattatt aacactttat tgatatttga 2040 ttcagcattt tctccagttt gtggtttgta tgtggatttt gaaaagtatt ttccatgtta 2100 agaatttgaa catttttatt taataaaata tattgcgaaa tttgtattaa tgatttacaa 2160 tcatcttaaa tccaccattt tgtggtatta ttgtctccag gtttctcctt acttctaaaa 2220 aaaaactgta tttattgaga gtatgctagt gtcagggatt ttcctgggca taagcacccc 2280 aagtgacgag tcccagacac tgccttaatc caaatgtcat tctggaaaga aaaatcattt 2340 tacaatgata ggcctaataa taattaagct tgtgttgcac aggagataca ttgatcagct 2400 aaatgtaaac gtaagaactt tcaaaactaa aatgacattc cttaatcatt ctctctgcgt 2460 taggactcat gcttttctag gaacgtaaaa atttgagaat catttctgtc tgtcccacct 2520 tcccaggggc agaaccattt ctgtggtgtt ctaaggtgtg agtgcatggt ggtagtattc 2580 ccaaaaattc atactcggtt tcctcatgta cccaactctg tccctttatc tacccacatt 2640 gctttaagtc atatttttct gtcacggtgt acaaggatga taaataggtg ccaagtggag 2700 cacccaagtg tgatgagccc cctcacagtg gaatggagtg acaagctttc taacctcata 2760 aattgaaggc tatcttcagt cattgtttta tatattttac gtgcattaat cctcatataa 2820 ccccaagagg taaattagta taattatcct tcattgtagg tgacaaagtt gagacacaga 2880 agaatcaaaa aactcttcca gcatcaacca gtaaaaggca gaccttggat ttcaaccagg 2940 caacgtggct cagatatcag ttttaattac tacactctac tgtcaaagat ttgtaaacac 3000 tttgacaatg catgccaatt tcaagctatg aagaaacaaa cacaattttt cacaacatct 3060 ctcaaatcta atgggtcctc actatcaaga ttaaattcca ggctgatgac actgtaaggc 3120 cacatggcca gctgtgctgg aggcctggtc aaggtcagag cctgggtttg cagagaagca 3180 gacaaacagc caaacaagga gacttactct gtcttcatga ctcattccca ctaccttttt 3240 tttctcctag tccaacctaa ggtgactgtg tatccttcaa agacccagcc cctgcagcac 3300 cacaacctcc tggtctgctc tgtgaatggt ttctatccag gcagcattga agtcaggtgg 3360 ttccggaacg gccaggaaga gaaggctggg gtggtgtcca caggcctgat ccagaatgga 3420 gactggacct tccagaccct ggtgatgctg gaaacagttc ctcggagtgg agaggtttac 3480 acctgccaag tggagcatcc aagcatgatg agccctctca cggtgcaatg gagttagcag 3540 ctttctgact tcctaaattt ctcacccacc aagaagggga ctgtgctaat ccctgagtgt 3600 caggtttctc ctctcccaca tcctattttc atttgctcca tgttctcatc tccatcagca 3660 caggtcactg ggctactggg ggtagccctg taggtgtttc tagaaacacc tgtaccccct 3720 ggggaatcag tcacgcctgc caggcgggag aggctgtccc tcttttgaac ctccccatga 3780 tgtcccagtt cagggtcacc cactctcccc aggctccagg ccctgcctct gggtctgaga 3840 ctgcgtttct ggtgctgttg atctgagttg tttgttgtga gaagaggaga actctagggg 3900 ccttcctgac atgaggggag tccaatctca actctgcctt ttattagctc tgtcactcta 3960 gacaaactac ttaacctcac tgagactcag gctttctgtt gatcagattt tgaagttgcg 4020 ccttacatca aggctgtaat atttgaaatg agtttgatgc ctggaccttg taactgttac 4080 agtgtgattt gaaaaccgtt ttttccccca gaaatggcta gttattttag ttcttacagg 4140 gcagccttct ttcccatttt gaaagctctg aatcttaggg tctcaattac agaggttcaa 4200 tttggaataa acactaaacc tggcttcctc tctcaggtgc acggtctgaa tctgcacaga 4260 gcaagatgct gagtggagtc gggggctttg tgctgggcct gctcttcctt gggacagggc 4320 tgttcatcta cttcaggaat cagaaaggtg aggagctttt gggagctgaa tctccatagg 4380 cttttctgga ggaggaacta tgactttgct agggttagtt ctcagtatat cagtggccct 4440 ggataaagcc tttctttccc caaatgacct ccaatgtcct gataatccag aaatcatcag 4500 tgcatggtta ctatgtcaaa gcataatagc ttgtggcctg cagagataag agaaaggtta 4560 acaagtaggg attctttggt tggagatcct ggagcaaatt aaggaagagc cactaaggct 4620 aatgcaatta cgctggatcc tgtgacagac acctcatgct tcatgggtca catggtctgt 4680 ttctgttcct ctctgccctg gttggtgtgg gttgtggtgt tagagaaatc tcaggtggga 4740 gatctggggc tgggacattg tgttagaaga cagatttgct tccatatctt ttaagtgtat 4800 atcttttcct ctttttccca ggacactctg gacttcagcc aacaggtaat accttttaat 4860 cctctttcag aaagagattc agtttcccta gaatgatggc agaggtgata aggcatgaga 4920 cagaaataat aggaaagact ttggatccag atttctgatc aggcaattta ccccagaact 4980 cctcctctcc acttagaaaa ggcctgtgct ttgcaggatc attggctcag ggagacttag 5040 gaacttgttt ttcttctccc tgcagtgctc tcatctgagt cgttgaaagc ggggaaaaga 5100 agttttagta aagccaggtc tgaaaacaat ttcctctgtc tctgca 5146 // ID KX687302; SV 1; linear; genomic DNA; STD; HUM; 5145 BP. XX AC KX687302; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate DL2 MHC class II antigen (HLA-DRB4) gene, DE HLA-DRB4*01_03_02e1 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5145 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-5145 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (07-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 9d51f09d8175d68bc9130ab0591ca5e9. XX FH Key Location/Qualifiers FH FT source 1..5145 FT /organism="Homo sapiens" FT /isolate="DL2" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <244..>4845 FT /gene="HLA-DRB4" FT /allele="HLA-DRB4*01_03_02e1" FT mRNA join(<244..513,3251..3532,4237..4347,4822..>4845) FT /gene="HLA-DRB4" FT /allele="HLA-DRB4*01_03_02e1" FT /product="MHC class II antigen" FT CDS join(<244..513,3251..3532,4237..4347,4822..>4845) FT /codon_start=3 FT /gene="HLA-DRB4" FT /allele="HLA-DRB4*01_03_02e1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A223G1C6" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A223G1C6" FT /protein_id="AST15814.1" FT /translation="RFLEQAKCECHFLNGTERVWNLIRYIYNQEEYARYNSDLGEYQAV FT TELGRPDAEYWNSQKDLLERRRAEVDTYCRYNYGVVESFTVQRRVQPKVTVYPSKTQPL FT QHHNLLVCSVNGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSMMSPLTVQWSARSESAQSKMLSGVGGFVLGLLFLGTGLFIYFRNQKGH FT SGLQPT" XX SQ Sequence 5145 BP; 1329 A; 1053 C; 1252 G; 1511 T; 0 other; cagggagggg gtccccaaaa gcctgaggat cagaaggggt tttcccgcct ggtcccccag 60 accccggttc gcctcaggaa gactgaggac gagcccctgg gctgctggtg gtgggcgttg 120 cgggtggggc cggttaaggt tcccagcgcc cgcaccccgc ccagggagtc cgggttggtg 180 gcgtcgctgt cagtgtcttc tcaggaggcc gcccgtgtga ccggatcgtt cgtgtcccca 240 cagcacgttt cttggagcag gctaagtgtg agtgtcattt cctcaatggg acggagcgag 300 tgtggaacct gatcagatac atctataacc aagaggagta cgcgcgctac aacagtgacc 360 tgggggagta ccaggcggtg acggagctgg ggcggcctga cgctgagtac tggaacagcc 420 agaaggacct cctggagcgg aggcgggccg aggtggacac ctactgcaga tacaactacg 480 gggttgtgga gagcttcaca gtgcagcggc gaggtgagca tggtggaggg cggggcctgg 540 gtccctgtga gcggggaatc tgtgtatgtg tgtgtgtgtg tgtgtgtgag agagagagag 600 agagagagag acagagaaag agagagagag cgtgcgccat ctgtgagcat ttagaatcct 660 ctctatcctt tcttatggct gcgcagtatt ccctggtgta taggtgccac attgtcttaa 720 tccagtctat cattgatgga cattagggtt aattccaagt ctttgctatt gtgaatagtg 780 tcagttcatg tcctttgtag ggacatggat gcagctggaa accatcattc tcagcaaact 840 atcacaagga cagaaaacca aacaccactt gttctcactc ataggtggga attgaacaat 900 gagaacacat ggacacagga aggggaacat cacacacagg ggcctgtcgt ggggtggggg 960 gagcagggag tgatagcatt aggagatata cctaatgtaa atgactagtt aatgggtgca 1020 gcataccaac atgacacatg tgtacatatg taacaaacct gcacgttgtg cacatgtatc 1080 ctagaactta aagtataata ataataatta tatatatata tatatattag aaaaacaaac 1140 aaaaagaatc ttctgtatcc tgagcaagga gttctgaagg cacaggtgtg tgtagagtgt 1200 ggatttgtct gtgtggctgt tgtgggaggg gaaacaggag ggggctgctt cttattcttg 1260 gaggcctctg tgcagaggtg acatgggagg tgggtgtagg gggctggaga gagaggagac 1320 cttgattgtc ctgggtcctt agagatgcag ggaagggaag aataaggtgt gtgtggttgg 1380 ggtgaaggtt taggggagga gagctgagga gtgtggaagg tttgggataa tgtgaggagg 1440 ccagttccag actgtccctg gcacacaccc ttcatgtaat ctctgaaata aaagtgtgtg 1500 ctgtttgttt gtaaaagcat tagattaatt tctaggggaa ttgaggagac ctctgaggca 1560 cctctgaagc ttctttaggt ctaaatttct tgctagtttt tgttttttta gggtgtatat 1620 ttttacatag cagaagtgac tgtgaaacta actttttgaa ttaaagtttt aacacagtta 1680 ctattttatt ataatgctaa tagttttcta gtagttacat cttattcttt tgtatataat 1740 agttgtgaca caacttacct cactttcccc tttttgttga cctttattat gactttcacc 1800 aaaagttgaa aatgtatgtt tctggttaat ttttacttta tatttttcat ttgtaattct 1860 tttgaattat tttgacctat ttattggcca attataatta ctgctgtaag aattccctat 1920 ttcatttggt agggaatgta caatgatcta ctgtctaata tcttaagggc ttagtatttt 1980 tctcagtgac tttgtgggtt ctttgtactg taagattatt aacactttat tgatatttga 2040 ttcagcattt tctccagttt gtggtttgta tgtggatttt gaaaagtatt ttccatgtta 2100 agaatttgaa catttttatt taataaaata tattgcgaaa tttgtattaa tgatttacaa 2160 tcatcttaaa tccaccattt tgtggtatta ttgtctccag gtttctcctt acttctaaaa 2220 aaaaactgta tttattgaga gtatgctagt gtcagggatt ttcctgggca taagcacccc 2280 aagtgacgag tcccagacac tgccttaatc caaatgtcat tctggaaaga aaaatcattt 2340 tacaatgata ggcctaataa taattaagct tgtgttgcac aggagataca ttgatcagct 2400 aaatgtaaac gtaagaactt tcaaaactaa aatgacattc cttaatcatt ctctctgcgt 2460 taggactcat gcttttctag gaacgtaaaa atttgagaat catttctgtc tgtcccacct 2520 tcccaggggc agaaccattt ctgtggtgtt ctaaggtgtg agtgcatggt ggtagtattc 2580 ccaaaaattc atactcggtt tcctcatgta cccaactctg tccctttatc tacccacatt 2640 gctttaagtc atatttttct gtcacggtgt acaaggatga taaataggtg ccaagtggag 2700 cacccaagtg tgatgagccc cctcacagtg gaatggagtg acaagctttc taacctcata 2760 aattgaaggc tatcttcagt cattgtttta tatattttac gtgcattaat cctcatataa 2820 ccccaagagg taaattagta taattatcct tcattgtagg tgacaaagtt gagacacaga 2880 agaatcaaaa aactcttcca gcatcaacca gtaaaaggca gaccttggat ttcaaccagg 2940 caacatggct cagatatcag ttttaattac tacactctac tgtcaaagat ttgtaaacac 3000 tttgacaatg catgccaatt tcaagctatg aagaaacaaa cacaattttt cacaacatct 3060 ctcaaatcta atgggtcctc actatcaaga ttaaattcca ggctgatgac actgtaaggc 3120 cacatggcca gctgtgctgg aggcctggtc aaggtcagag cctgggtttg cagagaagca 3180 gacaaacagc caaacaagga gacttactct gtcttcatga ctcattccca ctaccttttt 3240 tttctcctag tccaacctaa ggtgactgtg tatccttcaa agacccagcc cctgcagcac 3300 cacaacctcc tggtctgctc tgtgaatggt ttctatccag gcagcattga agtcaggtgg 3360 ttccggaacg gccaggaaga gaaggctggg gtggtgtcca caggcctgat ccagaatgga 3420 gactggacct tccagaccct ggtgatgctg gaaacagttc ctcggagtgg agaggtttac 3480 acctgccaag tggagcatcc aagcatgatg agccctctca cagtgcaatg gagttagcag 3540 ctttctgact tcctaaattt ctcacccacc aagaagggga ctgtgctaat ccctgagtgt 3600 caggtttctc ctctcccaca tcctattttc atttgctcca tgttctcatc tccatcagca 3660 caggtcactg ggctactggg ggtagccctg taggtgtttc tagaaacacc tgtaccccct 3720 ggggaatcag tcacgcctgc caggcgggag aggctgtccc tcttttgaac ctccccatga 3780 tgtcccagtt cagggtcacc cactctcccc aggctccagg ccctgcctct gggtctgaga 3840 ctgcgtttct ggtgctgttg atctgagttg tttgttgtga gaagaggaga actctagggg 3900 ccttcctgac atgaggggag tccaatctca actctgcctt ttattagctc tgtcactcta 3960 gacaaactac ttaacctcac tgagactcag gctttctgtt gatcagattt tgaagttgcg 4020 ccttacatca aggctgtaat atttgaaatg agtttgatgc ctggaccttg taactgttac 4080 agtgtgattt gaaaaccgtt ttttccccca gaaatggcta gttattttag ttcttacagg 4140 gcagccttct ttcccatttt gaaagctctg aatcttaggg tctcaattac agaggttcaa 4200 tttggaataa acactaaacc tggcttcctc tctcaggtgc acggtctgaa tctgcacaga 4260 gcaagatgct gagtggagtc gggggctttg tgctgggcct gctcttcctt gggacagggc 4320 tgttcatcta cttcaggaat cagaaaggtg aggagctttt gggagctgaa tctccatagg 4380 cttttctgga ggaggaacta tgactttgct agggttagtt ctcagtatat cagtggccct 4440 ggataaagcc tttctttccc caaatgacct ccaatgtcct gataatccag aaatcatcag 4500 tgcatggtta ctatgtcaaa gcataatagc ttgtggcctg cagagataag agaaaggtta 4560 acaagtaggg attctttggt tggagatcct ggagcaaatt aaggaagagc cactaaggct 4620 aatgcaatta cgctggatcc tgtgacagac acctcatgct tcatgggtca catggtctgt 4680 ttctgttcct ctctgccctg gttggtgtgg gttgtggtgt tagagaaatc tcaggtggga 4740 gatctggggc tgggacattg tgttagaaga cagatttgct tccatatctt ttaagtgtat 4800 atcttttcct ctttttccca ggacactctg gacttcagcc aacaggtaat accttttaat 4860 cctctttcag aaagagattc agtttcccta gaatgatggc agaggtgata aggcatgaga 4920 cagaaataat aggaaagact ttggatccag atttctgatc aggcaattta ccccagaact 4980 cctcctctcc acttagaaaa ggcctgtgct ttgcaggatc attggctcag ggagacttag 5040 gaacttgttt ttcttctccc tgcagtgctc tcatctgagt cgttgaaagc ggggaaaaga 5100 agttttagta aagccaggtc tgaaaacaat ttcctctgtc tctgc 5145 // ID KX687303; SV 1; linear; genomic DNA; STD; HUM; 4304 BP. XX AC KX687303; XX DT 23-AUG-2017 (Rel. 133, Created) DT 23-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens MHC class I antigen (HLA-C) gene, HLA-C*04:01:01:01e1 allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-4304 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-4304 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (09-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 82240abb734b2c1146544acfdfb1e76d. DR IMGT/HLA; HLA-C*04:01:01:14; HLA17684. XX CC ##Assembly-Data-START## CC Assembly Method :: Program in house v. k1.1 CC Sequencing Technology :: Illumina; Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..4304 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <496..>3390 FT /gene="HLA-C" FT /allele="HLA-C*04:01:01:01e1" FT mRNA join(<496..568,699..968,1215..1490,2078..2353,2475..2594, FT 3034..3066,3174..3221,3386..>3390) FT /gene="HLA-C" FT /allele="HLA-C*04:01:01:01e1" FT /product="MHC class I antigen" FT CDS join(496..568,699..968,1215..1490,2078..2353,2475..2594, FT 3034..3066,3174..3221,3386..3390) FT /codon_start=1 FT /gene="HLA-C" FT /allele="HLA-C*04:01:01:01e1" FT /product="MHC class I antigen" FT /db_xref="GOA:Q5D1W8" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q5D1W8" FT /protein_id="ASU06326.1" FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFSTSVSWPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPREPWVEQEGPEYWDRETQKYKRQAQADRVNLRK FT LRGYYNQSEDGSHTLQRMFGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWKPSSQPTIPIVGIVAGLAVLAVLAVLGAMVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" XX SQ Sequence 4304 BP; 835 A; 1198 C; 1300 G; 971 T; 0 other; ttattttgct ggatgtagtt taatattacc tgaggtaagg taaggcaaag agtgggaggc 60 agggagtcca gttcagggac ggggattcca ggagaagtga aggggaaggg gctgggcgca 120 gcctgggggt ctctccctgg tttccacaga cagatccttg gccaggactc aggcacacag 180 tgtgacaaag atgcttggtg taggagaaga ggaatcagga cgaagtccca ggtcccgggc 240 ggggctctca gggtctcagg ctccaagggc cgtgtctgca ctggggaggc gccgcgttgg 300 ggattctcca ctcccctgag tttcacttct tctcccaacc tgcgtcgggt ccttcttcct 360 gaatactcat gacgcgtccc caattcccac tcccattggg tgtcgggttc tagagaagcc 420 aatcagcgtc tccgcagtcc cggttctaaa gtccccagtc acccacccgg actcagattc 480 tccccagacg ccgagatgcg ggtcatggcg ccccgaaccc tcatcctgct gctctcggga 540 gccctggccc tgaccgagac ctgggccggt gagtgcgggg ttgggaggga aacggcctct 600 ggggagagga gcgaggggcc cgcccggcga gggcgcagga cccggggagc cgcgcaggga 660 ggagggtcgg gcgggtctca gccactcctc gtccccaggc tcccactcca tgaggtattt 720 ctccacatcc gtgtcctggc ccggccgcgg ggagccccgc ttcatcgcag tgggctacgt 780 ggacgacacg cagttcgtgc ggttcgacag cgacgccgcg agtccaagag gggagccgcg 840 ggagccgtgg gtggagcagg aggggccgga gtattgggac cgggagacac agaagtacaa 900 gcgccaggca caggctgacc gagtgaacct gcggaaactg cgcggctact acaaccagag 960 cgaggacggt gagtgacccc ggcccggggc gcaggtcacg acccctcccc atcccccacg 1020 gacggcccgg gtcgccccga gtctccccgt ctgagatcca ccccgaggct gcggaacccg 1080 cccagaccct cgaccggaga gagccccagt cacctttacc cggtttcatt ttcagtttag 1140 gccaaaatcc ccgcgggttg gtcgggactg gggcggggct cgggggaccg ggctgaccac 1200 gggggcgggg ccagggtctc acaccctcca gaggatgttt ggctgcgacc tggggccgga 1260 cgggcgcctc ctccgcgggt ataaccagtt cgcctacgac ggcaaggatt acatcgccct 1320 gaacgaggat ctgcgctcct ggaccgccgc ggacacggcg gctcagatca cccagcgcaa 1380 gtgggaggcg gcccgtgagg cggagcagcg gagagcctac ctggagggca cgtgcgtgga 1440 gtggctccgc agatacctgg agaacgggaa ggagacgctg cagcgcgcgg gtaccagggg 1500 cagtggggag ccttccccat ctcccgtaga tctcccggga tggcctccca cgaggagggg 1560 aggaaaatgg gatcagcgct agaatatcgc cctcccttga atggagaatg ggatgagttt 1620 tcctgagttt cctctgaggg ccccctctgc tctctaggac aattaaggga tgaagtcctt 1680 gaggaaatgg aggggaagac agtccctgga atactgatca ggggtcccct ttgaccactt 1740 tgaccactgc agcagctgtg gtcaggctgc tgacctttct ctcaggcctt gttctctgcc 1800 tgacgctcaa tgtgtttgaa ggtttgattc cagcttttct gagtccttcg gcctccactc 1860 aggtcaggac cagaagtcgc tgttcctccc tcagagacta gaactttcca atgaatagga 1920 gattatccca ggtgcctgtg tccaggctgg cgtctgggtt ctgtgccccc ttccccaccc 1980 caggtgtcct gtccattctc aggatggtca catgggcgct gttggagtgt cgcaagagag 2040 atacaaagtg tctgaatttt ctgactcttc ccatcagaac acccaaagac acacgtgacc 2100 caccatcccg tctctgacca tgaggccacc ctgaggtgct gggccctggg cttctaccct 2160 gcggagatca cactgacctg gcagtgggat ggggaggacc aaactcagga caccgagctt 2220 gtggagacca ggccagcagg agatggaacc ttccagaagt gggcagctgt ggtggtgcct 2280 tctggagaag agcagagata cacgtgccat gttcagcacg aggggctgcc ggagcccctc 2340 accctgagat ggagtaagga gggggatgag gggtgatgtg tcttctcagg gaaagcagaa 2400 gtcctggagc ccttcagccg ggtcagggct gaggcttgga ggtcagggcc cctcaccttc 2460 ccctcctttc ccagagccgt cttcccagcc caccatcccc atcgtgggca tcgttgctgg 2520 cctggctgtc ctggctgtcc tagctgtcct aggagctatg gtggctgttg tgatgtgtag 2580 gaggaagagc tcaggtaggg aaggggtgag gagtggggtc tgggttttct tgttccactg 2640 ggagtttcaa gccccaggta gaagtgtgcc ccacctcgtt actggaagca ccatccacac 2700 atgggccatc ccagcctggg accctgtgtg ccagcactta ctctgttgtg aagcacatga 2760 caatgaagga cagatgtatc accttgatga ttatggtgtt ggggtccttg attccagcat 2820 tcatgagtca ggggaaggtc cctgctaagg acagacctta ggagggcagt tgcttcagaa 2880 cccacagctg ctttccccgt gtttcctgat cctgccctgg gtctgcagtc atagttctgg 2940 aaacttctct tgggtccaag actaggaggt tcccctaaga tcgcatggcc ctgcctcctc 3000 cctgtcccct cacagggcat tttcttccca caggtggaaa aggagggagc tgctctcagg 3060 ctgcgtgtaa gtgatggcgg tgggcgtgtg gaggagctca cccaccccat aattcctctt 3120 gtcccacatc tcctgcgggc tctgaccagg tctttttttt tgttctaccc cagccagcaa 3180 cagtgcccag ggctctgatg agtctctcat cgcttgtaaa ggtgagattc tggggagctg 3240 aagtggtcgg gggtggggca gagggaaaag gcctaggtaa tggggatcct ttgattggga 3300 cgtttcgaat gtgtggtgag ctgttcagag tgtcatcact taccatgact gacctgaatt 3360 tgttcatgac tattgtgttc tgtagcctga gacagctgcc tgtgtgggac tgagatgcag 3420 gatttcttca cacctctcct ttgtgacttc aagagcctct ggcatctctt tctgcaaagg 3480 catctgaatg tgtctgcgtt cctgttagca taatgtgagg aggtggagag acagcccacc 3540 cccgtgtcca ccgtgacccc tgtccccaca ctgacctgtg ttccctcccc gatcatcttt 3600 cctgttccag agaagtgggc tggatgtctc catctctgtc tcaacttcat ggtgcgctga 3660 gctgcaactt cttacttccc taatgaagtt aagaacctga atataaattt gttttctcaa 3720 atatttgcta tgaagggttg atggattaat taaataagtc aattcctgga agttgagaga 3780 gcaaataaag acctgagaac cttccagaat ccgcatgttc gctgtgctga gtctgttgca 3840 ggtgggggtg gggaaggctg tgaggagccg agtgtggacg gggcctgtgc ctagttgctg 3900 ttcagttctt catgggcttt atgtggtcag tcctcagctg ggtcaccttc actgctccat 3960 tgtccttgtc ccttcagtgg aaacttgtcc agcgggagct gtgaccacag aggctcacac 4020 atcgcccagg gcagcccctg cacacgggag tccctgtgct ttctgagaca aattttcaga 4080 cccattcagc tcctgccctc cttctagggc tcctcttctg ctttggtctc ctgccctctc 4140 tcccttccct gattccagtg atcttcgtgc tgactccaat cccaactcat gaatctaaag 4200 cagagcctaa tttagattta tatttgtttg taaaattggg tccatagtct agaattgttc 4260 cttcctgaag agagaaacct gattgtgtgc tgcagtgtgt gggg 4304 // ID KX687304; SV 1; linear; genomic DNA; STD; HUM; 4304 BP. XX AC KX687304; XX DT 23-AUG-2017 (Rel. 133, Created) DT 23-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens MHC class I antigen (HLA-C) gene, HLA-C*03:04:01x1 allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-4304 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT "HLA variation in coding and non-coding gene segments"; RL Unpublished. XX RN [2] RP 1-4304 RA Barsakis K., Babrzadeh F., Chi A., Mindrinos M.N., Fernandez-Vina M.A.; RT ; RL Submitted (10-AUG-2016) to the INSDC. RL Stanford Blood Center, Stanford School of Medicine, 3165 Porter Drive, Palo RL Alto, CA 94304, USA XX DR MD5; 9c51441d819bb306d93c70db767a1b42. XX CC ##Assembly-Data-START## CC Assembly Method :: Program in house v. k1.1 CC Sequencing Technology :: Illumina; Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..4304 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <496..>3389 FT /gene="HLA-C" FT /allele="HLA-C*03:04:01x1" FT mRNA join(<496..568,699..968,1214..1489,2077..2352,2474..2593, FT 3033..3065,3173..3220,3385..>3389) FT /gene="HLA-C" FT /allele="HLA-C*03:04:01x1" FT /product="MHC class I antigen" FT CDS join(496..568,699..968,1214..1489,2077..2352,2474..2593, FT 3033..3065,3173..3220,3385..3389) FT /codon_start=1 FT /gene="HLA-C" FT /allele="HLA-C*03:04:01x1" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A223LN56" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A223LN56" FT /protein_id="ASU06327.1" FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFYPAVSRPGRGEPH FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN FT LRGYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQYAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQLRAYLEGLCVEWLRRYLKNGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" XX SQ Sequence 4304 BP; 829 A; 1199 C; 1304 G; 972 T; 0 other; ttattttgct ggatgtagtt taatattacc tgaggtaagg taaggcaaag agtgggaggc 60 agggagtcca gttcagggac ggggattcca ggagaagtga aggggaaggg gctgggcgca 120 gcctgggggt ctctccctgg tttccacaga cagatccttg gccaggactc aggcacacag 180 tgtgacaaag atgcttggtg taggagaaga ggaatcagga cgaagtccca ggtcccgggc 240 ggggctctca gggtctcagg ctccaagggc cgtgtctgca ctggggaggc gccgcgttga 300 ggattctcca ctcccctgag tttcacttct tctcccaacc tgcgtcgggt ccttcttcct 360 gaatactcat gacgcgtccc caattcccac tcccattggg tgtcggattc tagagaagcc 420 aaccagcgtc tccgcagtcc cggttctgaa gtccccagtc acccacccgg actcagattc 480 tccccagacg ccgagatgcg ggtcatggcg ccccgaaccc tcatcctgct gctctcggga 540 gccctggccc tgaccgagac ctgggccggt gagtgcgggg ttgggaggga atcggcctct 600 gcggagagga gcgaggggcc cgcccggcga gggcgcagga cccggggagc cgcgcaggga 660 ggagggtcgg gcgggtctca gcccctcctc gcccccaggc tcccactcca tgaggtattt 720 ctaccccgct gtgtcccggc ccggccgcgg ggagccccac ttcatcgcag tgggctacgt 780 ggacgacacg cagttcgtgc ggttcgacag cgacgccgcg agtccgagag gggagccgcg 840 ggcgccgtgg gtggagcagg aggggccgga gtattgggac cgggagacac agaagtacaa 900 gcgccaggca cagactgacc gagtgagcct gcggaacctg cgcggctact acaaccagag 960 cgaggccggt gagtgacccc ggcccggggc gcaggtcacg acccctcctc atcccccacg 1020 gacggcccgg gtcgccccaa gtctcccggt ctgagatcct ccccgaggct gcggaacccg 1080 cccagaccct cgaccggaga gagccccagt cacctttacc cggtttcatt ttcagtttag 1140 gccaaaatcc ccgcgggttg gtcggggcgg ggcggggctc gggggacggg gctgaccgcg 1200 ggggcggggc cagggtctca catcatccag aggatgtatg gctgcgacgt ggggcccgac 1260 gggcgcctcc tccgcgggta tgaccagtac gcctacgacg gcaaggatta catcgccctg 1320 aacgaggatc tgcgctcctg gaccgccgcg gacacggcgg ctcagatcac ccagcgcaag 1380 tgggaggcgg cccgtgaggc ggagcagctg agagcctacc tggagggcct gtgcgtggag 1440 tggctccgca gatacctgaa gaatgggaag gagacgctgc agcgcgcggg taccaggggc 1500 agtggggagc cttccccatc tcctgtagat ctcccgggat ggcctcccat gaggagggga 1560 ggaaaatggg atcagcgcta gaatatcgcc ctcccttgaa tggagaatgg gatgagtttt 1620 cctgagtttc ctctgagggc cccctctgct ctctaggaca attaagggat gaagtccttg 1680 aggaaatgga ggggaagaca gtccctagaa tactgatcag gggtcccctt tgaccacttt 1740 gaccactgca gcagctgtgg tcaggctgct gacctttctc tcaggccttg ttctctgcct 1800 cacgctcaat gtgtttgaag gtttgattcc agcttttctg agtccttcgg cctccactca 1860 ggtcaggacc agaagtcgct gttcctccct cagagactag aaccttccaa tgaataggag 1920 attatcccag gtgcctgtgt ccaggctggc gtctgggttc tgtgccccct tccccacccc 1980 aggtgtcctg tccgttctca ggatggtcac atgggcgctg ttggagtgtc gcaagagaga 2040 tacaaagtgt ctgaattttc tgactcttcc cgtcagaaca cccaaagaca cacgtgaccc 2100 accatcccgt ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg 2160 cggagatcac actgacctgg cagtgggatg gggaggacca aactcaggac actgagcttg 2220 tggagaccag gccagcagga gatggaacct tccagaagtg ggcagctgtg gtggtgcctt 2280 ctggagaaga gcagagatac acgtgccatg tgcagcacga ggggctgccg gagcccctca 2340 ccctgagatg gggtaaggag ggggatgagg ggtgatgtgt cttctcaggg aaagcagaag 2400 tcctggagcc cttcagccag gtcagggctg aggcttgggg gtcagggccc ctcaccttcc 2460 cctcctttcc cagagccgtc ttcccagccc accatcccca tcgtgggcat cgttgctggc 2520 ctggctgtcc tggctgtcct agctgtccta ggagctgtgg tggctgttgt gatgtgtagg 2580 aggaagagct caggtaggga aggggtgagg agtggggtct gggttttctt gttccactgg 2640 gagtttcaag ccccaggtag aagtgtgccc cacctcgtta ctggaagcac catccacaca 2700 tgggccatcc cagcctggga ccctgtgtgc cagcacttac tctgttgtga agcacatgac 2760 aatgaaggac agatgtatca ccttgatgat tatggtgttg gggtccttga ttccagcatt 2820 catgagtcag gggaaggtcc ctgctaagga cagaccttag gagggcagtt gctccagaac 2880 ccacagctgc tttccccgtg tttcctgatc ctgccctggg tctgcagtca tagttctgga 2940 aacttctctt gggtccaaga ctaggaggtt cccctaagat cgcatggccc tgactcctcc 3000 ctgtcccctt acagggcatt ttcttcccac aggtggaaaa ggagggagct gctctcaggc 3060 tgcgtgtaag tgatggcggt gggcgtgtgg aggagctcac ccaccccata attcctcttg 3120 tcccacatct cctgcgggct ctgaccaggt cttttttttt gttctacccc agccagcaac 3180 agtgcccagg gctctgatga gtctctcatc gcttgtaaag gtgagattct ggggagctga 3240 agtggtcggg ggtggggcag agggaaaagg cctaggtaat ggggatcctt tgattgggac 3300 gtttcgaatg tgtggtgagc tgttcagagt gtgatcactt accatgactg acctgaattt 3360 gttcatgact attgtgttct gtagcctgag acagctgcct gtgtgggact gagatgcagg 3420 atttcttcac acctctcctt tgtgacttca agagcctctg gcatctcttt ctgcgaaggc 3480 atctgaatgt gtctgcgttc ctgttagcat aatgtgagga ggtggacaga cagcccaccc 3540 ccgtgtccac cgtgacccct gtccccacac tgacctgtgt tccctccccg atcatctttc 3600 ctgttccaga gaagtgggct ggatgtctcc atctctgtct caacttcatg gtgcgctgag 3660 ctgcaacttc ttacttccct aatgaagtta ggaacctgaa tataaatttg ttttctcaaa 3720 tatttgctat gaagggttga tggattaatt aaataagtca attcctggaa gttgagagag 3780 caaataaaga cctgagaact ttccagaatc cgcgtgttct ctgtgctgag tctgtcgcag 3840 gtgggggtgg ggaaggctgt gaggagccga gtgtggacgg gggcctgtgc ctagttgctg 3900 ttcagttctt catgggcttt atgtagtcag tccttagctg ggtcaccttc accgctccat 3960 tgtccttgcc ccttcagtgg aaacttgtcc agcaggagct gtgaccacag aggctcacac 4020 atcgcccagg gcagcccctg cacacgggag tccctgtgct ttctgagaca aattttcaga 4080 cccattcagc tcctgccctc cttatagggc tcctcttctg ctttggtctc ctgccctctc 4140 tcccttccct gattccagta atcttcgtgc tgactccaat cccaactcat gaatctaaag 4200 cagagcctaa tttagattta tatttgtttg taaaattggg tccatagtct agaattgttc 4260 cttcctgaag agagaaacct gattgtgtgc tgcagtgtgc gggg 4304 // ID KX688759; SV 1; linear; genomic DNA; STD; HUM; 866 BP. XX AC KX688759; XX DT 02-NOV-2016 (Rel. 130, Created) DT 02-NOV-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens ATP-binding cassette sub-family B member 6 (ABCB6) gene, exon DE 1 and partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-866 RA Liu Y., Liu T., Zheng L., Ma L., Shi L.; RT "Exon 1 sequence of langereis blood group in Chinese Han population"; RL Unpublished. XX RN [2] RP 1-866 RA Liu Y., Liu T., Zheng L., Ma L., Shi L.; RT ; RL Submitted (11-AUG-2016) to the INSDC. RL Blood Group Reference Department, Jiangsu Province Blood Center, 179 Long RL Pan Road, Nanjing, Jiangsu Province 210042, China XX DR MD5; 8027a8257729c7867b7f41ca1a45f2a1. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..866 FT /organism="Homo sapiens" FT /chromosome="2" FT /map="2q36" FT /isolate="jsm20160621002" FT /mol_type="genomic DNA" FT /tissue_type="blood" FT /db_xref="taxon:9606" FT gene 1..>866 FT /gene="ABCB6" FT mRNA 1..>866 FT /gene="ABCB6" FT /product="ATP-binding cassette sub-family B member 6" FT exon 1..866 FT /gene="ABCB6" FT /number=1 FT variation 58 FT /gene="ABCB6" FT /replace="g" FT variation 260 FT /gene="ABCB6" FT /replace="c" FT CDS 318..>866 FT /codon_start=1 FT /gene="ABCB6" FT /product="ATP-binding cassette sub-family B member 6" FT /db_xref="GOA:A0A1D9ITY9" FT /db_xref="InterPro:IPR032410" FT /db_xref="UniProtKB/TrEMBL:A0A1D9ITY9" FT /protein_id="AOZ15555.1" FT /translation="MVTVGNYCEAEGPVGPAWMQDGLSPCFFFTLVPSTRMALGTLALV FT LALPCRRRERPAGADSLSWGAGPRISPYVLQLLLATLQAALPLAGLAGRVGTARGAPLP FT SYLLLASVLESLAGACGLWLLVVERSQARQRLAMGIWIKFRHSPGLLLLWTVAFAAENL FT ALVSWNSPQWWWARADLGQQ" FT variation 434 FT /gene="ABCB6" FT /replace="g" XX SQ Sequence 866 BP; 104 A; 287 C; 312 G; 163 T; 0 other; ccgtggagcg cggtgcgagt ccaacaccga gcattcccgt gggcctgcag ttggcagaag 60 ggtcccgggc ccagagccag cggggccgtg ctgagacggc gtacgtgccc tgcgtgagtg 120 cgtggcggcg gcgcgtgcgc taggggagtg ggcggtgagg cctggtccac gtgcgtccct 180 tcccgggacc cccgcagctt ggcgcccagc ggctacgtga gccaaggcac ccggatgtcc 240 gcgcccctct ccgagtgaca agtcccggcc tccggtcccg cagtgcccgc agcctcggcc 300 ggcgtccacg cattgccatg gtgactgtgg gcaactactg cgaggccgaa gggcccgtgg 360 gtccggcctg gatgcaggat ggcctgagtc cctgcttctt cttcacgctc gtgccctcga 420 cgcggatggc tctagggact ctggccttgg tgctggctct tccctgcaga cgccgggagc 480 ggcccgctgg tgctgattcg ctgtcttggg gggccggccc tcgcatctct ccctacgtgc 540 tgcagctgct tctggccaca cttcaggcgg cgctgcccct ggccggcctg gctggccggg 600 tgggcactgc ccggggggcc ccactgccaa gctatctact tctggcctcc gtgctggaga 660 gtctggccgg cgcctgtggc ctgtggctgc ttgtcgtgga gcggagccag gcacggcagc 720 gtctggcaat gggcatctgg atcaagttca ggcacagccc tggtctcctg ctcctctgga 780 ctgtggcgtt tgcagctgag aacttggccc tggtgtcttg gaacagccca cagtggtggt 840 gggcaagggc agacttgggc cagcag 866 // ID KX688842; SV 1; linear; genomic DNA; STD; HUM; 368 BP. XX AC KX688842; XX DT 23-AUG-2017 (Rel. 133, Created) DT 23-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate MA1 paired-like homeodomain-3 (PITX3) gene, exon 3 and DE partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-368 RA Vidya N.G., Rajkumar S.; RT "Mutation Screening in candidate genes of congenital ocular anomalies in RT western Indian population"; RL Unpublished. XX RN [2] RP 1-368 RA Vidya N.G., Rajkumar S.; RT ; RL Submitted (11-AUG-2016) to the INSDC. RL Molecular Genetics and Biochemistry, Iladevi Cataract and IOL Research RL Centre, Gurukul Road, Memnagar, Ahmedabad, Gujarat 380052, India XX DR MD5; 2d6020aeb409f53dfcab4f6b12f2000f. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..368 FT /organism="Homo sapiens" FT /chromosome="10" FT /map="10q24.32" FT /isolate="MA1" FT /mol_type="genomic DNA" FT /country="India" FT /collection_date="10-Sep-2012" FT /cell_type="leucocytes" FT /tissue_type="blood" FT /note="bilateral microphthalmia case" FT /db_xref="taxon:9606" FT gene <1..>368 FT /gene="PITX3" FT mRNA <93..>295 FT /gene="PITX3" FT /product="paired-like homeodomain-3" FT CDS <93..>295 FT /codon_start=3 FT /gene="PITX3" FT /product="paired-like homeodomain-3" FT /db_xref="GOA:A0A223LNB9" FT /db_xref="InterPro:IPR001356" FT /db_xref="InterPro:IPR009057" FT /db_xref="UniProtKB/TrEMBL:A0A223LNB9" FT /protein_id="ASU06387.1" FT /translation="SEKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNR FT YPDMSTREEIAVWTNLTEARVR" FT exon 93..295 FT /gene="PITX3" FT /number=3 FT variation 259 FT /gene="PITX3" FT /replace="t" FT /note="synonymous substitution" XX SQ Sequence 368 BP; 69 A; 135 C; 119 G; 45 T; 0 other; tcgggagcca gcgagtggct taggaggtcc ccgagccgga gaatatgcgc tggcttgggc 60 gctctgtgac ctgcccccac cctggccccc agactcagaa aaggcctcgg cttcgctgcc 120 cggcggctcc ccagaggacg gttcgctgaa aaagaagcag cggcggcagc gcacgcactt 180 caccagccag cagctacagg agctagaggc gaccttccag aggaaccgct accccgacat 240 gagcacgcgc gaggagatcg ccgtgtggac caacctcacc gaggcccgcg tgcgggtatg 300 ctctccagac ccgcgactcg cacccgcgcg ggccctccgc gctcagcctg cgacccggag 360 gccagcgg 368 // ID KX688843; SV 1; linear; genomic DNA; STD; HUM; 357 BP. XX AC KX688843; XX DT 23-AUG-2017 (Rel. 133, Created) DT 23-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate MA3 paired-like homeodomain-3 (PITX3) gene, exon 3 and DE partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-357 RA Vidya N.G., Rajkumar S.; RT "Mutation Screening in candidate genes of congenital ocular anomalies in RT western Indian population"; RL Unpublished. XX RN [2] RP 1-357 RA Vidya N.G., Rajkumar S.; RT ; RL Submitted (11-AUG-2016) to the INSDC. RL Molecular Genetics and Biochemistry, Iladevi Cataract and IOL Research RL Centre, Gurukul Road, Memnagar, Ahmedabad, Gujarat 380052, India XX DR MD5; 55a753087f6ad366f4ba85fe4b5e317f. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..357 FT /organism="Homo sapiens" FT /chromosome="10" FT /map="10q24.32" FT /isolate="MA3" FT /mol_type="genomic DNA" FT /country="India" FT /collection_date="10-Sep-2012" FT /cell_type="leucocytes" FT /tissue_type="blood" FT /note="bilateral anophthalmia case" FT /db_xref="taxon:9606" FT gene <1..>357 FT /gene="PITX3" FT mRNA <83..>285 FT /gene="PITX3" FT /product="paired-like homeodomain-3" FT CDS <83..>285 FT /codon_start=3 FT /gene="PITX3" FT /product="paired-like homeodomain-3" FT /db_xref="GOA:A0A223LNP9" FT /db_xref="InterPro:IPR001356" FT /db_xref="InterPro:IPR009057" FT /db_xref="UniProtKB/TrEMBL:A0A223LNP9" FT /protein_id="ASU06388.1" FT /translation="SEKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNR FT YPDMSTREEIAVWTNLTEARVR" FT exon 83..285 FT /gene="PITX3" FT /number=3 FT variation 249 FT /gene="PITX3" FT /replace="t" FT /note="synonymous substitution" XX SQ Sequence 357 BP; 68 A; 131 C; 114 G; 44 T; 0 other; gcgagtggct taggaggtcc ccgagccgga gaatatgcgc tggcttgggc gctctgtgac 60 ctgcccccac cctggccccc agactcagaa aaggcctcgg cttcgctgcc cggcggctcc 120 ccagaggacg gttcgctgaa aaagaagcag cggcggcagc gcacgcactt caccagccag 180 cagctacagg agctagaggc gaccttccag aggaaccgct accccgacat gagcacgcgc 240 gaggagatcg ccgtgtggac caacctcacc gaggcccgcg tgcgggtatg ctctccagac 300 ccgcgactcg cacccgcgcg ggccctccgc gctcagcctg cgacccggag gccagag 357 // ID KX688844; SV 1; linear; genomic DNA; STD; HUM; 357 BP. XX AC KX688844; XX DT 23-AUG-2017 (Rel. 133, Created) DT 23-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate MA8 paired-like homeodomain-3 (PITX3) gene, exon 3 and DE partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-357 RA Vidya N.G., Rajkumar S.; RT "Mutation Screening in candidate genes of congenital ocular anomalies in RT western Indian population"; RL Unpublished. XX RN [2] RP 1-357 RA Vidya N.G., Rajkumar S.; RT ; RL Submitted (11-AUG-2016) to the INSDC. RL Molecular Genetics and Biochemistry, Iladevi Cataract and IOL Research RL Centre, Gurukul Road, Memnagar, Ahmedabad, Gujarat 380052, India XX DR MD5; 6cc5fac23ec40c2a04bc1aa2cd9a0aa9. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..357 FT /organism="Homo sapiens" FT /chromosome="10" FT /map="10q24.32" FT /isolate="MA8" FT /mol_type="genomic DNA" FT /country="India" FT /collection_date="14-Sep-2012" FT /cell_type="leucocytes" FT /tissue_type="blood" FT /note="bilateral microphthalmia case" FT /db_xref="taxon:9606" FT gene <1..>357 FT /gene="PITX3" FT mRNA <82..>284 FT /gene="PITX3" FT /product="paired-like homeodomain-3" FT CDS <82..>284 FT /codon_start=3 FT /gene="PITX3" FT /product="paired-like homeodomain-3" FT /db_xref="GOA:A0A223LNB8" FT /db_xref="InterPro:IPR001356" FT /db_xref="InterPro:IPR009057" FT /db_xref="UniProtKB/TrEMBL:A0A223LNB8" FT /protein_id="ASU06389.1" FT /translation="SEKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNR FT YPDMSTREEIAVWTNLTEARVR" FT exon 82..284 FT /gene="PITX3" FT /number=3 XX SQ Sequence 357 BP; 67 A; 132 C; 114 G; 44 T; 0 other; cgagtggctt aggaggtccc cgagccggag aatatgcgct ggcttgggcg ctctgtgacc 60 tgcccccacc ctggccccca gactcagaaa aggcctcggc ttcgctgccc ggcggctccc 120 cagaggacgg ttcgctgaaa aagaagcagc ggcggcagcg cacgcacttc accagccagc 180 agctacagga gctagaggcg accttccaga ggaaccgcta ccccgacatg agcacgcgcg 240 aggagatcgc cgtgtggacc aacctcaccg aggcccgcgt gcgggtatgc tctccagacc 300 cgcgactcgc acccgcgcgg gccctccgcg ctcagcctgc gacccggagg ccagcgg 357 // ID KX688890; SV 1; linear; genomic DNA; STD; HUM; 455 BP. XX AC KX688890; XX DT 05-SEP-2017 (Rel. 134, Created) DT 05-SEP-2017 (Rel. 134, Last updated, Version 1) XX DE Homo sapiens insulin-like growth factor binding protein-like 1 (IGFBPL1) DE gene, promoter region and partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-455 RA Paulo J.A., Green H.; RT "KDM2A, a multi-protein tether at CpG-rich loci"; RL Unpublished. XX RN [2] RP 1-455 RA Iuchi S.; RT ; RL Submitted (10-AUG-2016) to the INSDC. RL Department of Cell Biology, Harvard Medical School, 240 Longwood Av., RL Boston, MA 02115, USA XX DR MD5; dd3e956a6fdb3111b0e60a11938deee5. DR EuropePMC; PMC6445129; 30940825. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..455 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /collection_date="04-Apr-2016" FT /cell_type="keratinocytes" FT /db_xref="taxon:9606" FT gene 1..>455 FT /gene="IGFBPL1" FT regulatory 1..205 FT /gene="IGFBPL1" FT /note="Expressed in HEK293T cells but not in keratinocytes" FT /regulatory_class="promoter" FT regulatory 69..452 FT /gene="IGFBPL1" FT /regulatory_class="GC_signal" FT mRNA 206..>455 FT /gene="IGFBPL1" FT /product="insulin-like growth factor binding protein-like FT 1" FT CDS 229..>455 FT /codon_start=1 FT /gene="IGFBPL1" FT /product="insulin-like growth factor binding protein-like FT 1" FT /db_xref="GOA:A0A286RQC1" FT /db_xref="InterPro:IPR000867" FT /db_xref="InterPro:IPR011390" FT /db_xref="UniProtKB/TrEMBL:A0A286RQC1" FT /protein_id="ASW19381.1" FT /translation="MPRLSLLLPLLLLLLLPLLPPLSPSLGIRDVGGRRPKCGPCRPEG FT CPAPAPCPAPGISALDECGCCARCLGAEGA" XX SQ Sequence 455 BP; 44 A; 168 C; 181 G; 62 T; 0 other; ttccctcaag agtccaatcg gaggtcggag agctgctctc ggggcgaccc tccagctcgg 60 agacccgggc cgcgggcacc gcgcgggtcc cgggctggag cagcggtctg cgggcgcccc 120 gcggtgcagg cccggccaat cagcggccgc ggggcgggag cggtgactgc tcggcgggcg 180 cggagcggag cgcgaagcag aggcgccgcc gctgtcccgg agcaagccat gccgcgcttg 240 tctctgctct tgccgctgct gcttctgctg ctgctgccgc tgctgccgcc gctgtccccg 300 agccttggga tccgcgacgt gggcggccgg cgccccaagt gtggtccgtg ccggccagag 360 ggctgcccgg cgcctgcgcc ctgcccggcg cccgggatct cggcgctcga cgagtgcggc 420 tgctgcgccc gctgcctggg agccgagggc gcgag 455 // ID KX690094; SV 1; circular; genomic DNA; STD; HUM; 16570 BP. XX AC KX690094; XX DT 07-SEP-2016 (Rel. 129, Created) DT 07-SEP-2016 (Rel. 129, Last updated, Version 1) XX DE Homo sapiens haplogroup H7e mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16570 RA Yacobi D., Bedford F.L.; RT "Evidence of early gene flow between Ashkenazi Jews and non-Jewish RT Europeans in mitochondrial DNA haplogroup H7"; RL J Genet Geneal 7:0(2016). XX RN [2] RP 1-16570 RA Greenspan B.; RT ; RL Submitted (10-AUG-2016) to the INSDC. RL Family Tree DNA - Genealogy by Genetics, Ltd., 1445 North Loop West, Suite RL 820, Houston, TX 77008, USA XX DR MD5; 04faab4a097f34e92485044b4753eec1. DR Ensembl-Gn; ENSG00000198695; homo_sapiens. DR Ensembl-Gn; ENSG00000198763; homo_sapiens. DR Ensembl-Gn; ENSG00000198786; homo_sapiens. DR Ensembl-Gn; ENSG00000198804; homo_sapiens. DR Ensembl-Gn; ENSG00000198840; homo_sapiens. DR Ensembl-Gn; ENSG00000198886; homo_sapiens. DR Ensembl-Gn; ENSG00000198888; homo_sapiens. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Gn; ENSG00000228253; homo_sapiens. DR Ensembl-Tr; ENST00000361227; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000361381; homo_sapiens. DR Ensembl-Tr; ENST00000361390; homo_sapiens. DR Ensembl-Tr; ENST00000361453; homo_sapiens. DR Ensembl-Tr; ENST00000361567; homo_sapiens. DR Ensembl-Tr; ENST00000361624; homo_sapiens. DR Ensembl-Tr; ENST00000361681; homo_sapiens. DR Ensembl-Tr; ENST00000361851; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX FH Key Location/Qualifiers FH FT source 1..16570 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="FTDNA 308404" FT /mol_type="genomic DNA" FT /note="ethnicity:Ashkenazi; origin_locality:Rezina : FT Moldova" FT /db_xref="taxon:9606" FT /haplogroup="H7e" FT D-loop complement(join(16025..16570,1..578)) FT tRNA 579..649 FT /product="tRNA-Phe" FT rRNA 650..1603 FT /product="12S ribosomal RNA" FT tRNA 1604..1672 FT /product="tRNA-Val" FT rRNA 1673..3230 FT /product="16S ribosomal RNA" FT tRNA 3231..3305 FT /product="tRNA-Leu" FT gene 3308..4263 FT /gene="ND1" FT CDS 3308..4263 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4262..4263,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:U5Z754" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:U5Z754" FT /protein_id="AOH34935.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPITISSIPPQT" FT tRNA 4264..4332 FT /product="tRNA-Ile" FT tRNA complement(4330..4401) FT /product="tRNA-Gln" FT tRNA 4403..4470 FT /product="tRNA-Met" FT gene 4471..5512 FT /gene="ND2" FT CDS 4471..5512 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5512,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXY9" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q7GXY9" FT /protein_id="AOH34936.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPFLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5513..5577 FT /product="tRNA-Trp" FT tRNA complement(5588..5656) FT /product="tRNA-Ala" FT tRNA complement(5658..5730) FT /product="tRNA-Asn" FT tRNA complement(5762..5827) FT /product="tRNA-Cys" FT tRNA complement(5827..5892) FT /product="tRNA-Tyr" FT gene 5905..7446 FT /gene="COX1" FT CDS 5905..7446 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:U5YWV7" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:U5YWV7" FT /protein_id="AOH34937.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7446..7517) FT /product="tRNA-Ser" FT tRNA 7519..7586 FT /product="tRNA-Asp" FT gene 7587..8270 FT /gene="COX2" FT CDS 7587..8270 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /db_xref="GOA:E2JJS5" FT /db_xref="InterPro:IPR001505" FT /db_xref="InterPro:IPR002429" FT /db_xref="InterPro:IPR008972" FT /db_xref="InterPro:IPR011759" FT /db_xref="InterPro:IPR014222" FT /db_xref="InterPro:IPR034210" FT /db_xref="InterPro:IPR036257" FT /db_xref="UniProtKB/TrEMBL:E2JJS5" FT /protein_id="AOH34938.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIDAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8296..8365 FT /product="tRNA-Lys" FT gene 8367..8573 FT /gene="ATP8" FT CDS 8367..8573 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /db_xref="GOA:U5YV54" FT /db_xref="InterPro:IPR001421" FT /db_xref="InterPro:IPR039017" FT /db_xref="UniProtKB/TrEMBL:U5YV54" FT /protein_id="AOH34939.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8528..9208 FT /gene="ATP6" FT CDS 8528..9208 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B1D3" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B1D3" FT /protein_id="AOH34940.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMTMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9208..9991 FT /gene="COX3" FT CDS 9208..9991 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9991,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AOH34941.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9992..10059 FT /product="tRNA-Gly" FT gene 10060..10405 FT /gene="ND3" FT CDS 10060..10405 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10405,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXZ5" FT /db_xref="InterPro:IPR000440" FT /db_xref="InterPro:IPR038430" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ5" FT /protein_id="AOH34942.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWTE" FT tRNA 10406..10470 FT /product="tRNA-Arg" FT gene 10471..10767 FT /gene="ND4L" FT CDS 10471..10767 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AOH34943.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10761..12138 FT /gene="ND4" FT CDS 10761..12138 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12138,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:H9EC08" FT /db_xref="InterPro:IPR000260" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="InterPro:IPR010227" FT /db_xref="UniProtKB/TrEMBL:H9EC08" FT /protein_id="AOH34944.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12139..12207 FT /product="tRNA-His" FT tRNA 12208..12266 FT /product="tRNA-Ser" FT tRNA 12267..12337 FT /product="tRNA-Leu" FT gene 12338..14149 FT /gene="ND5" FT CDS 12338..14149 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:U5ZC31" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:U5ZC31" FT /protein_id="AOH34945.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPASPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14150..14674) FT /gene="ND6" FT CDS complement(14150..14674) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /db_xref="GOA:U5Z977" FT /db_xref="InterPro:IPR001457" FT /db_xref="UniProtKB/TrEMBL:U5Z977" FT /protein_id="AOH34946.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14675..14743) FT /product="tRNA-Glu" FT gene 14748..15888 FT /gene="CYTB" FT CDS 14748..15888 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15888,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q6VLV1" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q6VLV1" FT /protein_id="AOH34947.1" FT /translation="MTPMRKTNPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15889..15954 FT /product="tRNA-Thr" FT tRNA complement(15956..16024) FT /product="tRNA-Pro" XX SQ Sequence 16570 BP; 5116 A; 5183 C; 2176 G; 4095 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtatgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgcctcatc ctattattta tcgcacctac gttcaatatt 180 acaggcgaac atacttacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattgaat gtctgcacag ccgctttcca cacagacatc ataacaaaaa atttccacca 300 aacccccccc tccccccgct tctggccaca gcacttaaac acatctctgc caaaccccaa 360 aaacaaagaa ccctaacacc agcctaacca gatttcaaat tttatctttt ggcggtatgc 420 acttttaaca gtcacccccc aactaacaca ttattttccc ctcccactcc catactacta 480 atctcatcaa tacaaccccc gcccatccta cccagcacac acacaccgct gctaacccca 540 taccccgaac caaccaaacc ccaaagacac cccccacagt ttatgtagct tacctcctca 600 aagcaataca ctgaaaatgt ttagacgggc tcacatcacc ccataaacaa ataggtttgg 660 tcctagcctt tctattagct cttagtaaga ttacacatgc aagcatcccc gttccagtga 720 gttcaccctc taaatcacca cgatcaaaag ggacaagcat caagcacgca gcaatgcagc 780 tcaaaacgct tagcctagcc acacccccac gggaaacagc agtgattaac ctttagcaat 840 aaacgaaagt ttaactaagc tatactaacc ccagggttgg tcaatttcgt gccagccacc 900 gcggtcacac gattaaccca agtcaataga agccggcgta aagagtgttt tagatcaccc 960 cctccccaat aaagctaaaa ctcacctgag ttgtaaaaaa ctccagttga cacaaaatag 1020 actacgaaag tggctttaac atatctgaac acacaatagc taagacccaa actgggatta 1080 gataccccac tatgcttagc cctaaacctc aacagttaaa tcaacaaaac tgctcgccag 1140 aacactacga gccacagctt aaaactcaaa ggacctggcg gtgcttcata tccctctaga 1200 ggagcctgtt ctgtaatcga taaaccccga tcaacctcac cacctcttgc tcagcctata 1260 taccgccatc ttcagcaaac cctgatgaag gctacaaagt aagcgcaagt acccacgtaa 1320 agacgttagg tcaaggtgta gcccatgagg tggcaagaaa tgggctacat tttctacccc 1380 agaaaactac gatagccctt atgaaactta agggtcgaag gtggatttag cagtaaactg 1440 agagtagagt gcttagttga acagggccct gaagcgcgta cacaccgccc gtcaccctcc 1500 tcaagtatac ttcaaaggac atttaactaa aacccctacg catttatata gaggagacaa 1560 gtcgtaacat ggtaagtgta ctggaaagtg cacttggacg aaccagagtg tagcttaaca 1620 caaagcaccc aacttacact taggagattt caacttaact tgaccgctct gagctaaacc 1680 tagccccaaa cccactccac cttactacca gacaacctta gccaaaccat ttacccaaat 1740 aaagtatagg cgatagaaat tgaaacctgg cgcaatagat atagtaccgc aagggaaaga 1800 tgaaaaatta taaccaagca taatatagca aggactaacc cctatacctt ctgcataatg 1860 aattaactag aaataacttt gcaaggagag ccaaagctaa gacccccgaa accagacgag 1920 ctacctaaga acagctaaaa gagcacaccc gtctatgtag caaaatagtg ggaagattta 1980 taggtagagg cgacaaacct accgagcctg gtgatagctg gttgtccaag atagaatctt 2040 agttcaactt taaatttgcc cacagaaccc tctaaatccc cttgtaaatt taactgttag 2100 tccaaagagg aacagctctt tggacactag gaaaaaacct tgtagagaga gtaaaaaatt 2160 taacacccat agtaggccta aaagcagcca ccaattaaga aagcgttcaa gctcaacacc 2220 cactacctaa aaaatcccaa acatataact gaactcctca cacccaattg gaccaatcta 2280 tcaccctata gaagaactaa tgttagtata agtaacatga aaacattctc ctccgcataa 2340 gcctgcgtca gattaaaaca ctgaactgac aattaacagc ccaatatcta caatcaacca 2400 acaagtcatt attaccctca ctgtcaaccc aacacaggca tgctcataag gaaaggttaa 2460 aaaaagtaaa aggaactcgg caaatcttac cccgcctgtt taccaaaaac atcacctcta 2520 gcatcaccag tattagaggc accgcctgcc cagtgacaca tgtttaacgg ccgcggtacc 2580 ctaaccgtgc aaaggtagca taatcacttg ttccttaaat agggacctgt atgaatggct 2640 ccacgagggt tcagctgtct cttactttta accagtgaaa ttgacctgcc cgtgaagagg 2700 cgggcataac acagcaagac gagaagaccc tatggagctt taatttatta atgcaaacag 2760 tacctaacaa acccacaggt cctaaactac caaacctgca ttaaaaattt cggttggggc 2820 gacctcggag cagaacccaa cctccgagca gtacatgcta agacttcacc agtcaaagcg 2880 aactactata ctcaattgat ccaataactt gaccaacgga acaagttacc ctagggataa 2940 cagcgcaatc ctattctaga gtccatatca acaatagggt ttacgacctc gatgttggat 3000 caggacatcc cgatggtgca gccgctatta aaggttcgtt tgttcaacga ttaaagtcct 3060 acgtgatctg agttcagacc ggagtaatcc aggtcggttt ctatctactt caaattcctc 3120 cctgtacgaa aggacaagag aaataaggcc tacttcacaa agcgccttcc cccgtaaatg 3180 atatcatctc aacttagtat tatacccaca cccacccaag aacagggttt gttaagatgg 3240 cagagcccgg taatcgcata aaacttaaaa ctttacagtc agaggttcaa ttcctcttct 3300 taacaacata cccatggcca acctcctact cctcattgta cccattctaa tcgcaatggc 3360 attcctaatg cttaccgaac gaaaaattct aggctatata caactacgca aaggccccaa 3420 cgttgtaggc ccctacgggc tactacaacc cttcgctgac gccataaaac tcttcaccaa 3480 agagccccta aaacccgcca catctaccat caccctctac atcaccgccc cgaccttagc 3540 tctcaccatc gctcttctac tatgaacccc cctccccata cccaaccccc tggtcaacct 3600 caacctaggc ctcctattta ttctagccac ctctagccta gccgtttact caatcctctg 3660 atcagggtga gcatcaaact caaactacgc cctgatcggc gcactgcgag cagtagccca 3720 aacaatctca tatgaagtca ccctagccat cattctacta tcaacattac taataagtgg 3780 ctcctttaac ctctccaccc ttatcacaac acaagaacac ctctgattac tcctgccatc 3840 atgacccttg gccataatat gatttatctc cacactagca gagaccaacc gaaccccctt 3900 cgaccttgcc gaaggggagt ccgaactagt ctcaggcttc aacatcgaat acgccgcagg 3960 ccccttcgcc ctattcttca tagccgaata cacaaacatt attataataa acaccctcac 4020 cactacaatc ttcctaggaa caacatatga cgcactctcc cctgaactct acacaacata 4080 ttttgtcacc aagaccctac ttctaacctc cctgttctta tgaattcgaa cagcataccc 4140 ccgattccgc tacgaccaac tcatacacct cctatgaaaa aacttcctac cactcaccct 4200 agcattactt atatgatatg tctccatacc cattacaatc tccagcattc cccctcaaac 4260 ctaagaaata tgtctgataa aagagttact ttgatagagt aaataatagg agcttaaacc 4320 cccttatttc taggactatg agaatcgaac ccatccctga gaatccaaaa ttctccgtgc 4380 cacctatcac accccatcct aaagtaaggt cagctaaata agctatcggg cccatacccc 4440 gaaaatgttg gttataccct tcccgtacta attaatcccc tggcccaacc cgtcatctac 4500 tctaccatct ttgcaggcac actcatcaca gcgctaagct cgcactgatt ttttacctga 4560 gtaggcctag aaataaacat gctagctttt attccagttc taaccaaaaa aataaaccct 4620 cgttccacag aagctgccat caagtatttc ctcacgcaag caaccgcatc cataatcctt 4680 ctaatagcta tcctcttcaa caatatactc tccggacaat gaaccataac caatactacc 4740 aatcaatact catcattaat aatcataatg gctatagcaa taaaactagg aatggccccc 4800 tttcacttct gagtcccaga ggttacccaa ggcacccctc tgacatccgg cctgcttctt 4860 ctcacatgac aaaaactagc ccccatctca atcatatacc aaatctctcc ctcactaaac 4920 gtaagccttc tcctcactct ctcaatctta tccatcatag caggcagttg aggtggatta 4980 aaccaaaccc agctacgcaa aatcttagca tactcctcaa ttacccacat aggatgaata 5040 atagcagttc taccgtacaa ccctaacata accattctta atttaactat ttatattatc 5100 ctaactacta ccgcattcct actactcaac ttaaactcca gcaccacgac cctactacta 5160 tctcgcacct gaaacaagct aacatgacta acacccttaa ttccatccac cctcctctcc 5220 ctaggaggcc tgcccccgct aaccggcttt ttgcccaaat gggccattat cgaagaattc 5280 acaaaaaaca atagcctcat catccccacc atcatagcca ccatcaccct ccttaacctc 5340 tacttctacc tacgcctaat ctactccacc tcaatcacac tactccccat atctaacaac 5400 gtaaaaataa aatgacagtt tgaacataca aaacccaccc cattcctccc cacactcatc 5460 gcccttacca cgctactcct acctatctcc ccttttatac taataatctt atagaaattt 5520 aggttaaata cagaccaaga gccttcaaag ccctcagtaa gttgcaatac ttaatttctg 5580 taacagctaa ggactgcaaa accccactct gcatcaactg aacgcaaatc agccacttta 5640 attaagctaa gcccttacta gaccaatggg acttaaaccc acaaacactt agttaacagc 5700 taagcaccct aatcaactgg cttcaatcta cttctcccgc cgccgggaaa aaaggcggga 5760 gaagccccgg caggtttgaa gctgcttctt cgaatttgca attcaatatg aaaatcacct 5820 cggagctggt aaaaagaggc ctaacccctg tctttagatt tacagtccaa tgcttcactc 5880 agccatttta cctcaccccc actgatgttc gccgaccgtt gactattctc tacaaaccac 5940 aaagacattg gaacactata cctattattc ggcgcatgag ctggagtcct aggcacagct 6000 ctaagcctcc ttattcgagc cgagctgggc cagccaggca accttctagg taacgaccac 6060 atctacaacg ttatcgtcac agcccatgca tttgtaataa tcttcttcat agtaataccc 6120 atcataatcg gaggctttgg caactgacta gttcccctaa taatcggtgc ccccgatatg 6180 gcgtttcccc gcataaacaa cataagcttc tgactcttac ctccctctct cctactcctg 6240 ctcgcatctg ctatagtgga ggccggagca ggaacaggtt gaacagtcta ccctccctta 6300 gcagggaact actcccaccc tggagcctcc gtagacctaa ccatcttctc cttacaccta 6360 gcaggtgtct cctctatctt aggggccatc aatttcatca caacaattat caatataaaa 6420 ccccctgcca taacccaata ccaaacgccc ctcttcgtct gatccgtcct aatcacagca 6480 gtcctacttc tcctatctct cccagtccta gctgctggca tcactatact actaacagac 6540 cgcaacctca acaccacctt cttcgacccc gccggaggag gagaccccat tctataccaa 6600 cacctattct gatttttcgg tcaccctgaa gtttatattc ttatcctacc aggcttcgga 6660 ataatctccc atattgtaac ttactactcc ggaaaaaaag aaccatttgg atacataggt 6720 atggtctgag ctatgatatc aattggcttc ctagggttta tcgtgtgagc acaccatata 6780 tttacagtag gaatagacgt agacacacga gcatatttca cctccgctac cataatcatc 6840 gctatcccca ccggcgtcaa agtatttagc tgactcgcca cactccacgg aagcaatatg 6900 aaatgatctg ctgcagtgct ctgagcccta ggattcatct ttcttttcac cgtaggtggc 6960 ctgactggca ttgtattagc aaactcatca ctagacatcg tactacacga cacgtactac 7020 gttgtagccc acttccacta tgtcctatca ataggagctg tatttgccat cataggaggc 7080 ttcattcact gatttcccct attctcaggc tacaccctag accaaaccta cgccaaaatc 7140 catttcacta tcatattcat cggcgtaaat ctaactttct tcccacaaca ctttctcggc 7200 ctatccggaa tgccccgacg ttactcggac taccccgatg catacaccac atgaaacatc 7260 ctatcatctg taggctcatt catttctcta acagcagtaa tattaataat tttcatgatt 7320 tgagaagcct tcgcttcgaa gcgaaaagtc ctaatagtag aagaaccctc cataaacctg 7380 gagtgactat atggatgccc cccaccctac cacacattcg aagaacccgt atacataaaa 7440 tctagacaaa aaaggaagga atcgaacccc ccaaagctgg tttcaagcca accccatggc 7500 ctccatgact ttttcaaaaa ggtattagaa aaaccatttc ataactttgt caaagttaaa 7560 ttataggcta aatcctatat atcttaatgg cacatgcagc gcaagtaggt ctacaagacg 7620 ctacttcccc tatcatagaa gagcttatca cctttcatga tcacgccctc ataatcattt 7680 tccttatctg cttcctagtc ctgtatgccc ttttcctaac actcacaaca aaactaacta 7740 atactaacat ctcagacgct caggaaatag aaaccgtctg aactatcctg cccgccatca 7800 tcctagtcct catcgccctc ccatccctac gcatccttta cataacagac gaggtcaacg 7860 atccctccct taccatcaaa tcaattggcc accaatggta ctgaacctac gagtacaccg 7920 actacggcgg actaatcttc aactcctaca tacttccccc attattccta gaaccaggcg 7980 acctgcgact ccttgacgtt gacaatcgag tagtactccc gattgatgcc cccattcgta 8040 taataattac atcacaagac gtcttgcact catgagctgt ccccacatta ggcttaaaaa 8100 cagatgcaat tcccggacgt ctaaaccaaa ccactttcac cgctacacga ccgggggtat 8160 actacggtca atgctctgaa atctgtggag caaaccacag tttcatgccc atcgtcctag 8220 aattaattcc cctaaaaatc tttgaaatag ggcccgtatt taccctatag caccccctct 8280 accccctcta gagcccactg taaagctaac ttagcattaa ccttttaagt taaagattaa 8340 gagaaccaac acctctttac agtgaaatgc cccaactaaa tactaccgta tggcccacca 8400 taattacccc catactcctt acactattcc tcatcaccca actaaaaata ttaaacacaa 8460 actaccacct acctccctca ccaaagccca taaaaataaa aaattataac aaaccctgag 8520 aaccaaaatg aacgaaaatc tgttcgcttc attcattgcc cccacaatcc taggcctacc 8580 cgccgcagta ctgatcattc tatttccccc tctattgatc cccacctcca aatatctcat 8640 caacaaccga ctaatcacca cccaacaatg actaatcaaa ctaacctcaa aacaaatgat 8700 aaccatacac aacactaaag gacgaacctg atctcttata ctagtatcct taatcatttt 8760 tattgccaca actaacctcc tcggactcct gcctcactca tttacaccaa ccacccaact 8820 atctataaac ctagccatgg ccatcccctt atgagcgggc gcagtgatta taggctttcg 8880 ctctaagatt aaaaatgccc tagcccactt cttaccacaa ggcacaccta caccccttat 8940 ccccatacta gttattatcg aaaccatcag cctactcatt caaccaatag ccctggccgt 9000 acgcctaacc gctaacatta ctgcaggcca cctactcatg cacctaattg gaagcgccac 9060 cctagcaata tcaaccatta accttccctc tacacttatc atcttcacaa ttctaattct 9120 actgactatc ctagaaatcg ctgtcgcctt aatccaagcc tacgttttca cacttctagt 9180 aagcctctac ctgcacgaca acacataatg acccaccaat cacatgccta tcatatagta 9240 aaacccagcc catgacccct aacaggggcc ctctcagccc tcctaatgac ctccggccta 9300 gccatgtgat ttcacttcca ctccataacg ctcctcatac taggcctact aaccaacaca 9360 ctaaccatat accaatgatg gcgcgatgta acacgagaaa gcacatacca aggccaccac 9420 acaccacctg tccaaaaagg ccttcgatac gggataatcc tatttattac ctcagaagtt 9480 tttttcttcg caggattttt ctgagccttt taccactcca gcctagctcc taccccccaa 9540 ttaggagggc actggccccc aacaggcatc accccgctaa atcccctaga agtcccactc 9600 ctaaacacat ccgtattact cgcatcagga gtatcaatca cctgagctca ccatagtcta 9660 atagaaaaca accgaaacca aataattcaa gcactgctta ttacaatttt actgggtctc 9720 tattttaccc tcctacaagc ctcagagtac ttcgagtctc ccttcaccat ttccgacggc 9780 atctacggct caacattttt tgtagccaca ggcttccacg gacttcacgt cattattggc 9840 tcaactttcc tcactatctg cttcatccgc caactaatat ttcactttac atccaaacat 9900 cactttggct tcgaagccgc cgcctgatac tggcattttg tagatgtggt ttgactattt 9960 ctgtatgtct ccatctattg atgagggtct tactctttta gtataaatag taccgttaac 10020 ttccaattaa ctagttttga caacattcaa aaaagagtaa taaacttcgc cttaatttta 10080 ataatcaaca ccctcctagc cttactacta ataattatta cattttgact accacaactc 10140 aacggctaca tagaaaaatc caccccttac gagtgcggct tcgaccctat atcccccgcc 10200 cgcgtccctt tctccataaa attcttctta gtagctatta ccttcttatt atttgatcta 10260 gaaattgccc tccttttacc cctaccatga gccctacaaa caactaacct gccactaata 10320 gttatgtcat ccctcttatt aatcatcatc ctagccctaa gtctggccta tgagtgacta 10380 caaaaaggat tagactgaac cgaattggta tatagtttaa acaaaacgaa tgatttcgac 10440 tcattaaatt atgataatca tatttaccaa atgcccctca tttacataaa tattatacta 10500 gcatttacca tctcacttct aggaatacta gtatatcgct cacacctcat atcctcccta 10560 ctatgcctag aaggaataat actatcgctg ttcattatag ctactctcat aaccctcaac 10620 acccactccc tcttagccaa tattgtgcct attgccatac tagtctttgc cgcctgcgaa 10680 gcagcggtgg gcctagccct actagtctca atctccaaca catatggcct agactacgta 10740 cataacctaa acctactcca atgctaaaac taatcgtccc aacaattata ttactaccac 10800 tgacatgact ttccaaaaaa cacataattt gaatcaacac aaccacccac agcctaatta 10860 ttagcatcat ccctctacta ttttttaacc aaatcaacaa caacctattt agctgttccc 10920 caaccttttc ctccgacccc ctaacaaccc ccctcctaat actaactacc tgactcctac 10980 ccctcacaat catggcaagc caacgccact tatccagtga accactatca cgaaaaaaac 11040 tctacctctc tatactaatc tccctacaaa tctccttaat tataacattc acagccacag 11100 aactaatcat attttatatc ttcttcgaaa ccacacttat ccccaccttg gctatcatca 11160 cccgatgagg caaccagcca gaacgcctga acgcaggcac atacttccta ttctacaccc 11220 tagtaggctc ccttccccta ctcatcgcac taatttacac tcacaacacc ctaggctcac 11280 taaacattct actactcact ctcactgccc aagaactatc aaactcctga gccaacaact 11340 taatatgact agcttacaca atagctttta tagtaaagat acctctttac ggactccact 11400 tatgactccc taaagcccat gtcgaagccc ccatcgctgg gtcaatagta cttgccgcag 11460 tactcttaaa actaggcggc tatggtataa tacgcctcac actcattctc aaccccctga 11520 caaaacacat agcctacccc ttccttgtac tatccctatg aggcataatt ataacaagct 11580 ccatctgcct acgacaaaca gacctaaaat cgctcattgc atactcttca atcagccaca 11640 tagccctcgt agtaacagcc attctcatcc aaaccccctg aagcttcacc ggcgcagtca 11700 ttctcataat cgcccacggg cttacatcct cattactatt ctgcctagca aactcaaact 11760 acgaacgcac tcacagtcgc atcataatcc tctctcaagg acttcaaact ctactcccac 11820 taatagcttt ttgatgactt ctagcaagcc tcgctaacct cgccttaccc cccactatta 11880 acctactggg agaactctct gtgctagtaa ccacgttctc ctgatcaaat atcactctcc 11940 tacttacagg actcaacata ctagtcacag ccctatactc cctctacata tttaccacaa 12000 cacaatgggg ctcactcacc caccacatta acaacataaa accctcattc acacgagaaa 12060 acaccctcat gttcatacac ctatccccca ttctcctcct atccctcaac cccgacatca 12120 ttaccgggtt ttcctcttgt aaatatagtt taaccaaaac atcagattgt gaatctgaca 12180 acagaggctt acgacccctt atttaccgag aaagctcaca agaactgcta actcatgccc 12240 ccatgtctaa caacatggct ttctcaactt ttaaaggata acagctatcc attggtctta 12300 ggccccaaaa attttggtgc aactccaaat aaaagtaata accatgcaca ctactataac 12360 caccctaacc ctgacttccc taattccccc catccttacc accctcgtta accctaacaa 12420 aaaaaactca tacccccatt atgtaaaatc cattgtcgca tccaccttta ttatcagtct 12480 cttccccaca acaatattca tgtgcctaga ccaagaagtt attatctcga actgacactg 12540 agccacaacc caaacaaccc agctctccct aagcttcaaa ctagactact tctccataat 12600 attcatccct gtagcattgt tcgttacatg gtccatcata gaattctcac tgtgatatat 12660 aaactcagac ccaaacatta atcagttctt caaatatcta ctcatcttcc taattaccat 12720 actaatctta gttaccgcta acaacctatt ccaactgttc atcggctgag agggcgtagg 12780 aattatatcc ttcttgctca tcagttgatg atacgcccga gcagatgcca acacagcagc 12840 cattcaagca atcctataca accgtatcgg cgatatcggt ttcatcctcg ccttagcatg 12900 atttatccta cactccaact catgagaccc acaacaaata gcccttctaa acgctaatcc 12960 aagcctcacc ccactactag gcctcctcct agcagcagca ggcaaatcag cccaattagg 13020 tctccacccc tgactcccct cagccataga aggccccacc ccagtctcag ccctactcca 13080 ctcaagcact atagttgtag caggaatctt cttactcatc cgcttccacc ccctagcaga 13140 aaatagccca ctaatccaaa ctctaacact atgcttaggc gctatcacca ctctgttcgc 13200 agcagtctgc gcccttacac aaaatgacat caaaaaaatc gtagccttct ccacttcaag 13260 tcaactagga ctcataatag ttacaatcgg catcaaccaa ccacacctag cattcctgca 13320 catctgtacc cacgccttct tcaaagccat actatttatg tgctccgggt ccatcatcca 13380 caaccttaac aatgaacaag atattcgaaa aataggagga ctactcaaaa ccatacctct 13440 cacttcaacc tccctcacca ttggcagcct agcattagca ggaatacctt tcctcacagg 13500 tttctactcc aaagaccaca tcatcgaaac cgcaaacata tcatacacaa acgcctgagc 13560 cctatctatt actctcatcg ctacctccct gacaagcgcc tatagcactc gaataattct 13620 tctcacccta acaggtcaac ctcgcttccc cacccttact aacattaacg aaaataaccc 13680 caccctacta aaccccatta aacgcctggc agccggaagc ctattcgcag gatttctcat 13740 tactaacaac atttcccccg catccccctt ccaaacaaca atccccctct acctaaaact 13800 cacagccctc gctgtcactt tcctaggact tctaacagcc ctagacctca actacctaac 13860 caacaaactt aaaataaaat ccccactatg cacattttat ttctccaaca tactcggatt 13920 ctaccctagc atcacacacc gcacaatccc ctatctaggc cttcttacga gccaaaacct 13980 gcccctactc ctcctagacc taacctgact agaaaagcta ttacctaaaa caatttcaca 14040 gcaccaaatc tccacctcca tcatcacctc aacccaaaaa ggcataatta aactttactt 14100 cctctctttc ttcttcccac tcatcctaac cctactccta atcacataac ctattccccc 14160 gagcaatctc aattacaata tatacaccaa caaacaatgt tcaaccagta actactacta 14220 atcaacgccc ataatcatac aaagcccccg caccaatagg atcctcccga atcaaccctg 14280 acccctctcc ttcataaatt attcagcttc ctacactatt aaagtttacc acaaccacca 14340 ccccatcata ctctttcacc cacagcacca atcctacctc catcgctaac cccactaaaa 14400 cactcaccaa gacctcaacc cctgaccccc atgcctcagg atactcctca atagccatcg 14460 ctgtagtata tccaaagaca accatcattc cccctaaata aattaaaaaa actattaaac 14520 ccatataacc tcccccaaaa ttcagaataa taacacaccc gaccacaccg ctaacaatca 14580 atactaaacc cccataaata ggagaaggct tagaagaaaa ccccacaaac cccattacta 14640 aacccacact caacagaaac aaagcataca tcattattct cgcacggact acaaccacga 14700 ccaatgatat gaaaaaccat cgttgtattt caactacaag aacaccaatg accccaatac 14760 gcaaaactaa ccccctaata aaattaatta accactcatt catcgacctc cccaccccat 14820 ccaacatctc cgcatgatga aacttcggct cactccttgg cgcctgcctg atcctccaaa 14880 tcaccacagg actattccta gccatgcact actcaccaga cgcctcaacc gccttttcat 14940 caatcgccca catcactcga gacgtaaatt atggctgaat catccgctac cttcacgcca 15000 atggcgcctc aatattcttt atctgcctct tcctacacat cgggcgaggc ctatattacg 15060 gatcatttct ctactcagaa acctgaaaca tcggcattat cctcctgctt gcaactatag 15120 caacagcctt cataggctat gtcctcccgt gaggccaaat atcattctga ggggccacag 15180 taattacaaa cttactatcc gccatcccat acattgggac agacctagtt caatgaatct 15240 gaggaggcta ctcagtagac agtcccaccc tcacacgatt ctttaccttt cacttcatct 15300 tgcccttcat tattgcagcc ctagcagcac tccacctcct attcttgcac gaaacgggat 15360 caaacaaccc cctaggaatc acctcccatt ccgataaaat caccttccac ccttactaca 15420 caatcaaaga cgccctcggc ttacttctct tccttctctc cttaatgaca ttaacactat 15480 tctcaccaga cctcctaggc gacccagaca attataccct agccaacccc ttaaacaccc 15540 ctccccacat caagcccgaa tgatatttcc tattcgccta cacaattctc cgatccgtcc 15600 ctaacaaact aggaggcgtc cttgccctat tactatccat cctcatccta gcaataatcc 15660 ccatcctcca tatatccaaa caacaaagca taatatttcg cccactaagc caatcacttt 15720 attgactcct agccgcagac ctcctcattc taacctgaat cggaggacaa ccagtaagct 15780 acccttttac catcattgga caagtagcat ccgtactata cttcacaaca atcctaatcc 15840 taataccaac tatctcccta attgaaaaca aaatactcaa atgggcctgt ccttgtagta 15900 taaactaata caccagtctt gtaaaccgga gatgaaaacc tttttccaag gacaaatcag 15960 agaaaaagtc tttaactcca ccattagcac ccaaagctaa gattctaatt taaactattc 16020 tctgttcttt catggggaag cagatttggg taccacccaa gtattgactc acccatcaac 16080 aaccgctatg tatttcgtac attactgcca gccaccatga atattgtacg gtaccataaa 16140 tacttgacca cctgtagtac ataaaaaccc aatccacatc aaaaccccct ccccatgctt 16200 acaagcaagt acagcaatca accctcaact atcacacatc aactgcaact ccaaagccac 16260 ccctcaccca ctaggatacc aacaaaccta cccaccctta acagtacata gtacataaag 16320 ccatttaccg tacatagcac attacagtca aatcccttct cgtccccatg gatgaccccc 16380 ctcagatagg ggtcccttga ccaccatcct ccgtgaaatc aatatcccgc acaagagtgc 16440 tactctcctc gctccgggcc cataacactt gggggtagct aaagtgaact gtatccgaca 16500 tctggttcct acttcagggc cataaagcct aaatagccca cacgttcccc ttaaataaga 16560 catcacgatg 16570 // ID KX690095; SV 1; circular; genomic DNA; STD; HUM; 16572 BP. XX AC KX690095; XX DT 07-SEP-2016 (Rel. 129, Created) DT 07-SEP-2016 (Rel. 129, Last updated, Version 1) XX DE Homo sapiens haplogroup H7j1 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16572 RA Yacobi D., Bedford F.L.; RT "Evidence of early gene flow between Ashkenazi Jews and non-Jewish RT Europeans in mitochondrial DNA haplogroup H7"; RL J Genet Geneal 7:0(2016). XX RN [2] RP 1-16572 RA Greenspan B.; RT ; RL Submitted (10-AUG-2016) to the INSDC. RL Family Tree DNA - Genealogy by Genetics, Ltd., 1445 North Loop West, Suite RL 820, Houston, TX 77008, USA XX DR MD5; e03ed3e2a7710b21dddf96b4db6dd1de. DR Ensembl-Gn; ENSG00000198695; homo_sapiens. DR Ensembl-Gn; ENSG00000198712; homo_sapiens. DR Ensembl-Gn; ENSG00000198763; homo_sapiens. DR Ensembl-Gn; ENSG00000198786; homo_sapiens. DR Ensembl-Gn; ENSG00000198804; homo_sapiens. DR Ensembl-Gn; ENSG00000198840; homo_sapiens. DR Ensembl-Gn; ENSG00000198886; homo_sapiens. DR Ensembl-Gn; ENSG00000198888; homo_sapiens. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Gn; ENSG00000228253; homo_sapiens. DR Ensembl-Tr; ENST00000361227; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000361381; homo_sapiens. DR Ensembl-Tr; ENST00000361390; homo_sapiens. DR Ensembl-Tr; ENST00000361453; homo_sapiens. DR Ensembl-Tr; ENST00000361567; homo_sapiens. DR Ensembl-Tr; ENST00000361624; homo_sapiens. DR Ensembl-Tr; ENST00000361681; homo_sapiens. DR Ensembl-Tr; ENST00000361739; homo_sapiens. DR Ensembl-Tr; ENST00000361851; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX FH Key Location/Qualifiers FH FT source 1..16572 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="FTDNA 308404" FT /mol_type="genomic DNA" FT /note="ethnicity:Ashkenazi; origin_locality:Munkatch : FT Czechoslovakia" FT /db_xref="taxon:9606" FT /haplogroup="H7j1" FT D-loop complement(join(16027..16572,1..580)) FT tRNA 581..651 FT /product="tRNA-Phe" FT rRNA 652..1605 FT /product="12S ribosomal RNA" FT tRNA 1606..1674 FT /product="tRNA-Val" FT rRNA 1675..3232 FT /product="16S ribosomal RNA" FT tRNA 3233..3307 FT /product="tRNA-Leu" FT gene 3310..4265 FT /gene="ND1" FT CDS 3310..4265 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4264..4265,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:U5Z754" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:U5Z754" FT /protein_id="AOH34870.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPITISSIPPQT" FT tRNA 4266..4334 FT /product="tRNA-Ile" FT tRNA complement(4332..4403) FT /product="tRNA-Gln" FT tRNA 4405..4472 FT /product="tRNA-Met" FT gene 4473..5514 FT /gene="ND2" FT CDS 4473..5514 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5514,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXY9" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q7GXY9" FT /protein_id="AOH34871.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPFLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5515..5579 FT /product="tRNA-Trp" FT tRNA complement(5590..5658) FT /product="tRNA-Ala" FT tRNA complement(5660..5732) FT /product="tRNA-Asn" FT tRNA complement(5764..5829) FT /product="tRNA-Cys" FT tRNA complement(5829..5894) FT /product="tRNA-Tyr" FT gene 5907..7448 FT /gene="COX1" FT CDS 5907..7448 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:U5YWV7" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:U5YWV7" FT /protein_id="AOH34872.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7448..7519) FT /product="tRNA-Ser" FT tRNA 7521..7588 FT /product="tRNA-Asp" FT gene 7589..8272 FT /gene="COX2" FT CDS 7589..8272 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /db_xref="GOA:U5Z487" FT /db_xref="InterPro:IPR001505" FT /db_xref="InterPro:IPR002429" FT /db_xref="InterPro:IPR008972" FT /db_xref="InterPro:IPR011759" FT /db_xref="InterPro:IPR014222" FT /db_xref="InterPro:IPR034210" FT /db_xref="InterPro:IPR036257" FT /db_xref="UniProtKB/TrEMBL:U5Z487" FT /protein_id="AOH34873.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8298..8367 FT /product="tRNA-Lys" FT gene 8369..8575 FT /gene="ATP8" FT CDS 8369..8575 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /db_xref="GOA:U5YV54" FT /db_xref="InterPro:IPR001421" FT /db_xref="InterPro:IPR039017" FT /db_xref="UniProtKB/TrEMBL:U5YV54" FT /protein_id="AOH34874.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8530..9210 FT /gene="ATP6" FT CDS 8530..9210 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B1D3" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B1D3" FT /protein_id="AOH34875.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMTMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9210..9993 FT /gene="COX3" FT CDS 9210..9993 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9993,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AOH34876.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9994..10061 FT /product="tRNA-Gly" FT gene 10062..10407 FT /gene="ND3" FT CDS 10062..10407 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10407,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXZ5" FT /db_xref="InterPro:IPR000440" FT /db_xref="InterPro:IPR038430" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ5" FT /protein_id="AOH34877.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWTE" FT tRNA 10408..10472 FT /product="tRNA-Arg" FT gene 10473..10769 FT /gene="ND4L" FT CDS 10473..10769 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AOH34878.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10763..12140 FT /gene="ND4" FT CDS 10763..12140 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12140,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:H9EC08" FT /db_xref="InterPro:IPR000260" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="InterPro:IPR010227" FT /db_xref="UniProtKB/TrEMBL:H9EC08" FT /protein_id="AOH34879.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12141..12209 FT /product="tRNA-His" FT tRNA 12210..12268 FT /product="tRNA-Ser" FT tRNA 12269..12339 FT /product="tRNA-Leu" FT gene 12340..14151 FT /gene="ND5" FT CDS 12340..14151 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:U5ZC31" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:U5ZC31" FT /protein_id="AOH34880.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPASPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14152..14676) FT /gene="ND6" FT CDS complement(14152..14676) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /db_xref="GOA:U5Z977" FT /db_xref="InterPro:IPR001457" FT /db_xref="UniProtKB/TrEMBL:U5Z977" FT /protein_id="AOH34881.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14677..14745) FT /product="tRNA-Glu" FT gene 14750..15890 FT /gene="CYTB" FT CDS 14750..15890 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15890,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q6VLV1" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q6VLV1" FT /protein_id="AOH34882.1" FT /translation="MTPMRKTNPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15891..15956 FT /product="tRNA-Thr" FT tRNA complement(15958..16026) FT /product="tRNA-Pro" XX SQ Sequence 16572 BP; 5117 A; 5189 C; 2176 G; 4090 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtatgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgcctcatc ccattattta tcgcacctac gttcaatatt 180 acaggcgaac atacttacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattgaat gtctgcacag ccgctttcca cacagacatc ataacaaaaa atttccacca 300 aacccccccc tccccccgct tctggccaca gcacttaaac acatctctgc caaaccccaa 360 aaacaaagaa ccctaacacc agcctaacca gatttcaaat tttatctttt ggcggtatgc 420 acttttaaca gtcacccccc aactaacaca ttattttccc ctcccactcc catactacta 480 atctcatcaa tacaaccccc gcccatccta cccagcacac acacaccgct gctaacccca 540 taccccgaac caaccaaacc ccaaagacac cccccccaca gtttatgtag cttacctcct 600 caaagcaata cactgaaaat gtttagacgg gctcacatca ccccataaac aaataggttt 660 ggtcctagcc tttctattag ctcttagtaa gattacacat gcaagcatcc ccgttccagt 720 gagttcaccc tctaaatcac cacgatcaaa agggacaagc atcaagcacg cagcaatgca 780 gctcaaaacg cttagcctag ccacaccccc acgggaaaca gcagtgatta acctttagca 840 ataaacgaaa gtttaactaa gctatactaa ccccagggtt ggtcaatttc gtgccagcca 900 ccgcggtcac acgattaacc caagtcaata gaagccggcg taaagagtgt tttagatcac 960 cccctcccca ataaagctaa aactcacctg agttgtaaaa aactccagtt gacacaaaat 1020 agactacgaa agtggcttta acatatctga acacacaata gctaagaccc aaactgggat 1080 tagatacccc actatgctta gccctaaacc tcaacagtta aatcaacaaa actgctcgcc 1140 agaacactac gagccacagc ttaaaactca aaggacctgg cggtgcttca tatccctcta 1200 gaggagcctg ttctgtaatc gataaacccc gatcaacctc accacctctt gctcagccta 1260 tataccgcca tcttcagcaa accctgatga aggctacaaa gtaagcgcaa gtacccacgt 1320 aaagacgtta ggtcaaggtg tagcccatga ggtggcaaga aatgggctac attttctacc 1380 ccagaaaact acgatagccc ttatgaaact taagggtcga aggtggattt agcagtaaac 1440 tgagagtaga gtgcttagtt gaacagggcc ctgaagcgcg tacacaccgc ccgtcaccct 1500 cctcaagtat acttcaaagg acatttaact aaaaccccta cgcatttata tagaggagac 1560 aagtcgtaac atggtaagtg tactggaaag tgcacttgga cgaaccagag tgtagcttaa 1620 cacaaagcac ccaacttaca cttaggagat ttcaacttaa cttgaccgct ctgagctaaa 1680 cctagcccca aacccactcc accctactac cagacaacct tagccaaacc atttacccaa 1740 ataaagtata ggcgatagaa attgaaacct ggcgcaatag atatagtacc gcaagggaaa 1800 gatgaaaaat tataaccaag cataatatag caaggactaa cccctatacc ttctgcataa 1860 tgaattaact agaaataact ttgcaaggag agccaaagct aagacccccg aaaccagacg 1920 agctacctaa gaacagctaa aagagcacac ccgtctatgt agcaaaatag tgggaagatt 1980 tataggtaga ggcgacaaac ctaccgagcc tggtgatagc tggttgtcca agatagaatc 2040 ttagttcaac tttaaatttg cccacagaac cctctaaatc cccttgtaaa tttaactgtt 2100 agtccaaaga ggaacagctc tttggacact aggaaaaaac cttgtagaga gagtaaaaaa 2160 tttaacaccc atagtaggcc taaaagcagc caccaattaa gaaagcgttc aagctcaaca 2220 cccactacct aaaaaatccc aaacatataa ctgaactcct cacacccaat tggaccaatc 2280 tatcacccta tagaagaact aatgttagta taagtaacat gaaaacattc tcctccgcat 2340 aagcctgcgt cagattaaaa cactgaactg acaattaaca gcccaatatc tacaatcaac 2400 caacaagtca ttattaccct cactgtcaac ccaacacagg catgctcata aggaaaggtt 2460 aaaaaaagta aaaggaactc ggcaaatctt accccgcctg tttaccaaaa acatcacctc 2520 tagcatcacc agtattagag gcaccgcctg cccagtgaca catgtttaac ggccgcggta 2580 ccctaaccgt gcaaaggtag cataatcact tgttccttaa atagggacct gtatgaatgg 2640 ctccacgagg gttcagctgt ctcttacttt taaccagtga aattgacctg cccgtgaaga 2700 ggcgggcata acacagcaag acgagaagac cctatggagc tttaatttat taatgcaaac 2760 agtacctaac aaacccacag gtcctaaact accaaacctg cattaaaaat ttcggttggg 2820 gcgacctcgg agcagaaccc aacctccgag cagtacatgc taagacttca ccagtcaaag 2880 cgaactacta tactcaattg atccaataac ttgaccaacg gaacaagtta ccctagggat 2940 aacagcgcaa tcctattcta gagtccatat caacaatagg gtttacgacc tcgatgttgg 3000 atcaggacat cccgatggtg cagccgctat taaaggttcg tttgttcaac gattaaagtc 3060 ctacgtgatc tgagttcaga ccggagtaat ccaggtcggt ttctatctac ttcaaattcc 3120 tccctgtacg aaaggacaag agaaataagg cctacttcac aaagcgcctt cccccgtaaa 3180 tgatatcatc tcaacttagt attataccca cacccaccca agaacagggt ttgttaagat 3240 ggcagagccc ggtaatcgca taaaacttaa aactttacag tcagaggttc aattcctctt 3300 cttaacaaca tacccatggc caacctccta ctcctcattg tacccattct aatcgcaatg 3360 gcattcctaa tgcttaccga acgaaaaatt ctaggctata tacaactacg caaaggcccc 3420 aacgttgtag gcccctacgg gctactacaa cccttcgctg acgccataaa actcttcacc 3480 aaagagcccc taaaacccgc cacatctacc atcaccctct acatcaccgc cccgacctta 3540 gctctcacca tcgctcttct actatgaacc cccctcccca tacccaaccc cctggtcaac 3600 ctcaacctag gcctcctatt tattctagcc acctctagcc tagccgttta ctcaatcctc 3660 tgatcagggt gagcatcaaa ctcaaactac gccctgatcg gcgcactgcg agcagtagcc 3720 caaacaatct catatgaagt caccctagcc atcattctac tatcaacatt actaataagt 3780 ggctccttta acctctccac ccttatcaca acacaagaac acctctgatt actcctgcca 3840 tcatgaccct tggccataat atgatttatc tccacactag cagagaccaa ccgaaccccc 3900 ttcgaccttg ccgaagggga gtccgaacta gtctcaggct tcaacatcga atacgccgca 3960 ggccccttcg ccctattctt catagccgaa tacacaaaca ttattataat aaacaccctc 4020 accactacaa tcttcctagg aacaacatat gacgcactct cccctgaact ctacacaaca 4080 tattttgtca ccaagaccct acttctaacc tccctgttct tatgaattcg aacagcatac 4140 ccccgattcc gctacgacca actcatacac ctcctatgaa aaaacttcct accactcacc 4200 ctagcattac ttatatgata tgtctccata cccattacaa tctccagcat tccccctcaa 4260 acctaagaaa tatgtctgat aaaagagtta ctttgataga gtaaataata ggagcttaaa 4320 cccccttatt tctaggacta tgagaatcga acccatccct gagaatccaa aattctccgt 4380 gccacctatc acaccccatc ctaaagtaag gtcagctaaa taagctatcg ggcccatacc 4440 ccgaaaatgt tggttatacc cttcccgtac taattaatcc cctggcccaa cccgtcatct 4500 actctaccat ctttgcaggc acactcatca cagcgctaag ctcgcactga ttttttacct 4560 gagtaggcct agaaataaac atgctagctt ttattccagt tctaaccaaa aaaataaacc 4620 ctcgttccac agaagctgcc atcaagtatt tcctcacgca agcaaccgca tccataatcc 4680 ttctaatagc tatcctcttc aacaatatac tctccggaca atgaaccata accaatacta 4740 ccaatcaata ctcatcatta ataatcataa tggctatagc aataaaacta ggaatggccc 4800 cctttcactt ctgagtccca gaggttaccc aaggcacccc tctgacatcc ggcctgcttc 4860 ttctcacatg acaaaaacta gcccccatct caatcatata ccaaatctct ccctcactaa 4920 acgtaagcct tctcctcact ctctcaatct tatccatcat agcaggcagt tgaggtggat 4980 taaaccaaac ccagctacgc aaaatcttag catactcctc aattacccac ataggatgaa 5040 taatagcagt tctaccgtac aaccctaaca taaccattct taatttaact atttatatta 5100 tcctaactac taccgcattc ctactactca acttaaactc cagcaccacg accctactac 5160 tatctcgcac ctgaaacaag ctaacatgac taacaccctt aattccatcc accctcctct 5220 ccctaggagg cctgcccccg ctaaccggct ttttgcccaa atgggccatt atcgaagaat 5280 tcacaaaaaa caatagcctc atcatcccca ccatcatagc caccatcacc ctccttaacc 5340 tctacttcta cctacgccta atctactcca cctcaatcac actactcccc atatctaaca 5400 acgtaaaaat aaaatgacag tttgaacata caaaacccac cccattcctc cccacactca 5460 tcgcccttac cacgctactc ctacctatct ccccttttat actaataatc ttatagaaat 5520 ttaggttaaa tacagaccaa gagccttcaa agccctcagt aagttgcaat acttaatttc 5580 tgtaacagct aaggactgca aaaccccact ctgcatcaac tgaacgcaaa tcagccactt 5640 taattaagct aagcccttac tagaccaatg ggacttaaac ccacaaacac ttagttaaca 5700 gctaagcacc ctaatcaact ggcttcaatc tacttctccc gccgccggga aaaaaggcgg 5760 gagaagcccc ggcaggtttg aagctgcttc ttcgaatttg caattcaata tgaaaatcac 5820 ctcggagctg gtaaaaagag gcctaacccc tgtctttaga tttacagtcc aatgcttcac 5880 tcagccattt tacctcaccc ccactgatgt tcgccgaccg ttgactattc tctacaaacc 5940 acaaagacat tggaacacta tacctattat tcggcgcatg agctggagtc ctaggcacag 6000 ctctaagcct ccttattcga gccgagctgg gccagccagg caaccttcta ggtaacgacc 6060 acatctacaa cgttatcgtc acagcccatg catttgtaat aatcttcttc atagtaatac 6120 ccatcataat cggaggcttt ggcaactgac tagttcccct aataatcggt gcccccgata 6180 tggcgtttcc ccgcataaac aacataagct tctgactctt acctccctct ctcctactcc 6240 tgctcgcatc tgctatagtg gaggccggag caggaacagg ttgaacagtc taccctccct 6300 tagcagggaa ctactcccac cctggagcct ccgtagacct aaccatcttc tccttacacc 6360 tagcaggtgt ctcctctatc ttaggggcca tcaatttcat cacaacaatt atcaatataa 6420 aaccccctgc cataacccaa taccaaacgc ccctcttcgt ctgatccgtc ctaatcacag 6480 cagtcctact tctcctatct ctcccagtcc tagctgctgg catcactata ctactaacag 6540 accgcaacct caacaccacc ttcttcgacc ccgccggagg aggagacccc attctatacc 6600 aacacctatt ctgatttttc ggtcaccctg aagtttatat tcttatccta ccaggcttcg 6660 gaataatctc ccatattgta acttactact ccggaaaaaa agaaccattt ggatacatag 6720 gtatggtctg agctatgata tcaattggct tcctagggtt tatcgtgtga gcacaccata 6780 tatttacagt aggaatagac gtagacacac gagcatattt cacctccgct accataatca 6840 tcgctatccc caccggcgtc aaagtattta gctgactcgc cacactccac ggaagcaata 6900 tgaaatgatc tgctgcagtg ctctgagccc taggattcat ctttcttttc accgtaggtg 6960 gcctgactgg cattgtatta gcaaactcat cactagacat cgtactacac gacacgtact 7020 acgttgtagc ccacttccac tatgtcctat caataggagc tgtatttgcc atcataggag 7080 gcttcattca ctgatttccc ctattctcag gctacaccct agaccaaacc tacgccaaaa 7140 tccatttcac tatcatattc atcggcgtaa atctaacttt cttcccacaa cactttctcg 7200 gcctatccgg aatgccccga cgttactcgg actaccccga tgcatacacc acatgaaaca 7260 tcctatcatc tgtaggctca ttcatttctc taacagcagt aatattaata attttcatga 7320 tttgagaagc cttcgcttcg aagcgaaaag tcctaatagt agaagaaccc tccataaacc 7380 tggagtgact atatggatgc cccccaccct accacacatt cgaagaaccc gtatacataa 7440 aatctagaca aaaaaggaag gaatcgaacc ccccaaagct ggtttcaagc caaccccatg 7500 gcctccatga ctttttcaaa aaggtattag aaaaaccatt tcataacttt gtcaaagtta 7560 aattataggc taaatcctat atatcttaat ggcacatgca gcgcaagtag gtctacaaga 7620 cgctacttcc cctatcatag aagagcttat cacctttcat gatcacgccc tcataatcat 7680 tttccttatc tgcttcctag tcctgtatgc ccttttccta acactcacaa caaaactaac 7740 taatactaac atctcagacg ctcaggaaat agaaaccgtc tgaactatcc tgcccgccat 7800 catcctagtc ctcatcgccc tcccatccct acgcatcctt tacataacag acgaggtcaa 7860 cgatccctcc cttaccatca aatcaattgg ccaccaatgg tactgaacct acgagtacac 7920 cgactacggc ggactaatct tcaactccta catacttccc ccattattcc tagaaccagg 7980 cgacctgcga ctccttgacg ttgacaatcg agtagtactc ccgattgaag cccccattcg 8040 tataataatt acatcacaag acgtcttgca ctcatgagct gtccccacat taggcttaaa 8100 aacagatgca attcccggac gtctaaacca aaccactttc accgctacac gaccgggggt 8160 atactacggt caatgctctg aaatctgtgg agcaaaccac agtttcatgc ccatcgtcct 8220 agaattaatt cccctaaaaa tctttgaaat agggcccgta tttaccctat agcaccccct 8280 ctaccccctc tagagcccac tgtaaagcta acttagcatt aaccttttaa gttaaagatt 8340 aagagaacca acacctcttt acagtgaaat gccccaacta aatactaccg tatggcccac 8400 cataattacc cccatactcc ttacactatt cctcatcacc caactaaaaa tattaaacac 8460 aaactaccac ctacctccct caccaaagcc cataaaaata aaaaattata acaaaccctg 8520 agaaccaaaa tgaacgaaaa tctgttcgct tcattcattg cccccacaat cctaggccta 8580 cccgccgcag tactgatcat tctatttccc cctctattga tccccacctc caaatatctc 8640 atcaacaacc gactaatcac cacccaacaa tgactaatca aactaacctc aaaacaaatg 8700 ataaccatac acaacactaa aggacgaacc tgatctctta tactagtatc cttaatcatt 8760 tttattgcca caactaacct cctcggactc ctgcctcact catttacacc aaccacccaa 8820 ctatctataa acctagccat ggccatcccc ttatgagcgg gcgcagtgat tataggcttt 8880 cgctctaaga ttaaaaatgc cctagcccac ttcttaccac aaggcacacc tacacccctt 8940 atccccatac tagttattat cgaaaccatc agcctactca ttcaaccaat agccctggcc 9000 gtacgcctaa ccgctaacat tactgcaggc cacctactca tgcacctaat tggaagcgcc 9060 accctagcaa tatcaaccat taaccttccc tctacactta tcatcttcac aattctaatt 9120 ctactgacta tcctagaaat cgctgtcgcc ttaatccaag cctacgtttt cacacttcta 9180 gtaagcctct acctgcacga caacacataa tgacccacca atcacatgcc tatcatatag 9240 taaaacccag cccatgaccc ctaacagggg ccctctcagc cctcctaatg acctccggcc 9300 tagccatgtg atttcacttc cactccataa cgctcctcat actaggccta ctaaccaaca 9360 cactaaccat ataccaatga tggcgcgatg taacacgaga aagcacatac caaggccacc 9420 acacaccacc tgtccaaaaa ggccttcgat acgggataat cctatttatt acctcagaag 9480 tttttttctt cgcaggattt ttctgagcct tttaccactc cagcctagcc cctacccccc 9540 aattaggagg gcactggccc ccaacaggca tcaccccgct aaatccccta gaagtcccac 9600 tcctaaacac atccgtatta ctcgcatcag gagtatcaat cacctgagct caccatagtc 9660 taatagaaaa caaccgaaac caaataattc aagcactgct tattacaatt ttactgggtc 9720 tctattttac cctcctacaa gcctcagagt acttcgagtc tcccttcacc atttccgacg 9780 gcatctacgg ctcaacattt tttgtagcca caggcttcca cggacttcac gtcattattg 9840 gctcaacttt cctcactatc tgcttcatcc gccaactaat atttcacttt acatccaaac 9900 atcactttgg cttcgaagcc gccgcctgat actggcattt tgtagatgtg gtttgactat 9960 ttctgtatgt ctccatctat tgatgagggt cttactcttt tagtataaat agtaccgtta 10020 acttccaatt aactagtttt gacaacattc aaaaaagagt aataaacttc gccttaattt 10080 taataatcaa caccctccta gccttactac taataattat tacattttga ctaccacaac 10140 tcaacggcta catagaaaaa tccacccctt acgagtgcgg cttcgaccct atatcccccg 10200 cccgcgtccc tttctccata aaattcttct tagtagctat taccttctta ttatttgatc 10260 tagaaattgc cctcctttta cccctaccat gagccctaca aacaactaac ctgccactaa 10320 tagttatgtc atccctctta ttaatcatca tcctagccct aagtctggcc tatgagtgac 10380 tacaaaaagg attagactga accgaattgg tatatagttt aaacaaaacg aatgatttcg 10440 actcattaaa ttatgataat catatttacc aaatgcccct catttacata aatattatac 10500 tagcatttac catctcactt ctaggaatac tagtatatcg ctcacacctc atatcctccc 10560 tactatgcct agaaggaata atactatcgc tgttcattat agctactctc ataaccctca 10620 acacccactc cctcttagcc aatattgtgc ctattgccat actagtcttt gccgcctgcg 10680 aagcagcggt gggcctagcc ctactagtct caatctccaa cacatatggc ctagactacg 10740 tacataacct aaacctactc caatgctaaa actaatcgtc ccaacaatta tattactacc 10800 actgacatga ctttccaaaa aacacataat ttgaatcaac acaaccaccc acagcctaat 10860 tattagcatc atccctctac tattttttaa ccaaatcaac aacaacctat ttagctgttc 10920 cccaaccttt tcctccgacc ccctaacaac ccccctccta atactaacta cctgactcct 10980 acccctcaca atcatggcaa gccaacgcca cttatccagt gaaccactat cacgaaaaaa 11040 actctacctc tctatactaa tctccctaca aatctcctta attataacat tcacagccac 11100 agaactaatc atattttata tcttcttcga aaccacactc atccccacct tggctatcat 11160 cacccgatga ggcaaccagc cagaacgcct gaacgcaggc acatacttcc tattctacac 11220 cctagtaggc tcccttcccc tactcatcgc actaatttac actcacaaca ccctaggctc 11280 actaaacatt ctactactca ctctcactgc ccaagaacta tcaaactcct gagccaacaa 11340 cttaatatga ctagcttaca caatagcttt tatagtaaag atacctcttt acggactcca 11400 cttatgactc cctaaagccc atgtcgaagc ccccatcgct gggtcaatag tacttgccgc 11460 agtactctta aaactaggcg gctatggtat aatacgcctc acactcattc tcaaccccct 11520 gacaaaacac atagcctacc ccttccttgt actatcccta tgaggcataa ttataacaag 11580 ctccatctgc ctacgacaaa cagacctaaa atcgctcatt gcatactctt caatcagcca 11640 catagccctc gtagtaacag ccattctcat ccaaaccccc tgaagcttca ccggcgcagt 11700 cattctcata atcgcccacg ggcttacatc ctcattacta ttctgcctag caaactcaaa 11760 ctacgaacgc actcacagtc gcatcataat cctctctcaa ggacttcaaa ctctactccc 11820 actaatagct ttttgatgac ttctagcaag cctcgctaac ctcgccttac cccccactat 11880 taacctactg ggagaactct ctgtgctagt aaccacgttc tcctgatcaa atatcactct 11940 cctacttaca ggactcaaca tactagtcac agccctatac tccctctaca tatttaccac 12000 aacacaatgg ggctcactca cccaccacat taacaacata aaaccctcat tcacacgaga 12060 aaacaccctc atgttcatac acctatcccc cattctcctc ctatccctca accccgacat 12120 cattaccggg ttttcctctt gtaaatatag tttaaccaaa acatcagatt gtgaatctga 12180 caacagaggc ttacgacccc ttatttaccg agaaagctca caagaactgc taactcatgc 12240 ccccatgtct aacaacatgg ctttctcaac ttttaaagga taacagctat ccattggtct 12300 taggccccaa aaattttggt gcaactccaa ataaaagtaa taaccatgca cactactata 12360 accaccctaa ccctgacttc cctaattccc cccatcctta ccaccctcgt taaccctaac 12420 aaaaaaaact cataccccca ttatgtaaaa tccattgtcg catccacctt tattatcagt 12480 ctcttcccca caacaatatt catgtgccta gaccaagaag ttattatctc gaactgacac 12540 tgagccacaa cccaaacaac ccagctctcc ctaagcttca aactagacta cttctccata 12600 atattcatcc ctgtagcatt gttcgttaca tggtccatca tagaattctc actgtgatat 12660 ataaactcag acccaaacat taatcagttc ttcaaatatc tactcatctt cctaattacc 12720 atactaatct tagttaccgc taacaaccta ttccaactgt tcatcggctg agagggcgta 12780 ggaattatat ccttcttgct catcagttga tgatacgccc gagcagatgc caacacagca 12840 gccattcaag caatcctata caaccgtatc ggcgatatcg gtttcatcct cgccttagca 12900 tgatttatcc tacactccaa ctcatgagac ccacaacaaa tagcccttct aaacgctaat 12960 ccaagcctca ccccactact aggcctcctc ctagcagcag caggcaaatc agcccaatta 13020 ggtctccacc cctgactccc ctcagccata gaaggcccca ccccagtctc agccctactc 13080 cactcaagca ctatagttgt agcaggaatc ttcttactca tccgcttcca ccccctagca 13140 gaaaatagcc cactaatcca aactctaaca ctatgcttag gcgctatcac cactctgttc 13200 gcagcagtct gcgcccttac acaaaatgac atcaaaaaaa tcgtagcctt ctccacttca 13260 agtcaactag gactcataat agttacaatc ggcatcaacc aaccacacct agcattcctg 13320 cacatctgta cccacgcctt cttcaaagcc atactattta tgtgctccgg gtccatcatc 13380 cacaacctta acaatgaaca agatattcga aaaataggag gactactcaa aaccatacct 13440 ctcacttcaa cctccctcac cattggcagc ctagcattag caggaatacc tttcctcaca 13500 ggtttctact ccaaagacca catcatcgaa accgcaaaca tatcatacac aaacgcctga 13560 gccctatcta ttactctcat cgctacctcc ctgacaagcg cctatagcac tcgaataatt 13620 cttctcaccc taacaggtca acctcgcttc cccaccctta ctaacattaa cgaaaataac 13680 cccaccctac taaaccccat taaacgcctg gcagccggaa gcctattcgc aggatttctc 13740 attactaaca acatttcccc cgcatccccc ttccaaacaa caatccccct ctacctaaaa 13800 ctcacagccc tcgctgtcac tttcctagga cttctaacag ccctagacct caactaccta 13860 accaacaaac ttaaaataaa atccccacta tgcacatttt atttctccaa catactcgga 13920 ttctacccta gcatcacaca ccgcacaatc ccctatctag gccttcttac gagccaaaac 13980 ctgcccctac tcctcctaga cctaacctga ctagaaaagc tattacctaa aacaatttca 14040 cagcaccaaa tctccacctc catcatcacc tcaacccaaa aaggcataat taaactttac 14100 ttcctctctt tcttcttccc actcatccta accctactcc taatcacata acctattccc 14160 ccgagcaatc tcaattacaa tatatacacc aacaaacaat gttcaaccag taactactac 14220 taatcaacgc ccataatcat acaaagcccc cgcaccaata ggatcctccc gaatcaaccc 14280 tgacccctct ccttcataaa ttattcagct tcctacacta ttaaagttta ccacaaccac 14340 caccccatca tactctttca cccacagcac caatcctacc tccatcgcta accccactaa 14400 aacactcacc aagacctcaa cccctgaccc ccatgcctca ggatactcct caatagccat 14460 cgctgtagta tatccaaaga caaccatcat tccccctaaa taaattaaaa aaactattaa 14520 acccatataa cctcccccaa aattcagaat aataacacac ccgaccacac cgctaacaat 14580 caatactaaa cccccataaa taggagaagg cttagaagaa aaccccacaa accccattac 14640 taaacccaca ctcaacagaa acaaagcata catcattatt ctcgcacgga ctacaaccac 14700 gaccaatgat atgaaaaacc atcgttgtat ttcaactaca agaacaccaa tgaccccaat 14760 acgcaaaact aaccccctaa taaaattaat taaccactca ttcatcgacc tccccacccc 14820 atccaacatc tccgcatgat gaaacttcgg ctcactcctt ggcgcctgcc tgatcctcca 14880 aatcaccaca ggactattcc tagccatgca ctactcacca gacgcctcaa ccgccttttc 14940 atcaatcgcc cacatcactc gagacgtaaa ttatggctga atcatccgct accttcacgc 15000 caatggcgcc tcaatattct ttatctgcct cttcctacac atcgggcgag gcctatatta 15060 cggatcattt ctctactcag aaacctgaaa catcggcatt atcctcctgc ttgcaactat 15120 agcaacagcc ttcataggct atgtcctccc gtgaggccaa atatcattct gaggggccac 15180 agtaattaca aacttactat ccgccatccc atacattggg acagacctag ttcaatgaat 15240 ctgaggaggc tactcagtag acagtcccac cctcacacga ttctttacct ttcacttcat 15300 cttgcccttc attattgcag ccctagcagc actccacctc ctattcttgc acgaaacggg 15360 atcaaacaac cccctaggaa tcacctccca ttccgataaa atcaccttcc acccttacta 15420 cacaatcaaa gacgccctcg gcttacttct cttccttctc tccttaatga cattaacact 15480 attctcacca gacctcctag gcgacccaga caattatacc ctagccaacc ccttaaacac 15540 ccctccccac atcaagcccg aatgatattt cctattcgcc tacacaattc tccgatccgt 15600 ccctaacaaa ctaggaggcg tccttgccct attactatcc atcctcatcc tagcaataat 15660 ccccatcctc catatatcca aacaacaaag cataatattt cgcccactaa gccaatcact 15720 ttattgactc ctagccgcag acctcctcat tctaacctga atcggaggac aaccagtaag 15780 ctaccctttt accatcattg gacaagtagc atccgtacta tacttcacaa caatcctaat 15840 cctaatacca actatctccc taattgaaaa caaaatactc aaatgggcct gtccttgtag 15900 tataaactaa tacaccagtc ttgtaaaccg gagatgaaaa cctttttcca aggacaaatc 15960 agagaaaaag tctttaactc caccattagc acccaaagct aagattctaa tttaaactat 16020 tctctgttct ttcatgggga agcagatttg ggtaccaccc aagtattgac tcacccatca 16080 acaaccgcta tgtatttcgt acattactgc cagccaccat gaatattgta cggtaccata 16140 aatacttgac cacctgtagt acataaaaac ccaatccaca tcaaaacccc ctccccatgc 16200 ttacaagcaa gtacagcaat caaccctcaa ctatcacaca tcaactgcaa ctccaaagcc 16260 acccctcacc cactaggata ccaacaaacc tacccaccct taacagtaca tagtacataa 16320 agccatttac cgtacatagc acattacagt caaatccctt ctcgtcccca tggatgaccc 16380 ccctcagata ggggtccctt gaccaccatc ctccgtgaaa tcaatatccc gcacaagagt 16440 gctactctcc tcgctccggg cccataacac ttgggggtag ctaaagtgaa ctgtatccga 16500 catctggttc ctacttcagg gccataaagc ctaaatagcc cacacgttcc ccttaaataa 16560 gacatcacga tg 16572 // ID KX690209; SV 1; circular; genomic DNA; STD; HUM; 16571 BP. XX AC KX690209; XX DT 07-SEP-2016 (Rel. 129, Created) DT 07-SEP-2016 (Rel. 129, Last updated, Version 1) XX DE Homo sapiens haplogroup H7c2 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16571 RA Yacobi D., Bedford F.L.; RT "Evidence of early gene flow between Ashkenazi Jews and non-Jewish RT Europeans in mitochondrial DNA haplogroup H7"; RL J Genet Geneal 7:0(2016). XX RN [2] RP 1-16571 RA Greenspan B.; RT ; RL Submitted (11-AUG-2016) to the INSDC. RL Family Tree DNA - Genealogy by Genetics, Ltd., 1445 North Loop West, Suite RL 820, Houston, TX 77008, USA XX DR MD5; 161b51395e52601094a42105442ab4e1. DR Ensembl-Gn; ENSG00000198695; homo_sapiens. DR Ensembl-Gn; ENSG00000198712; homo_sapiens. DR Ensembl-Gn; ENSG00000198763; homo_sapiens. DR Ensembl-Gn; ENSG00000198786; homo_sapiens. DR Ensembl-Gn; ENSG00000198804; homo_sapiens. DR Ensembl-Gn; ENSG00000198840; homo_sapiens. DR Ensembl-Gn; ENSG00000198886; homo_sapiens. DR Ensembl-Gn; ENSG00000198888; homo_sapiens. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Gn; ENSG00000228253; homo_sapiens. DR Ensembl-Tr; ENST00000361227; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000361381; homo_sapiens. DR Ensembl-Tr; ENST00000361390; homo_sapiens. DR Ensembl-Tr; ENST00000361453; homo_sapiens. DR Ensembl-Tr; ENST00000361567; homo_sapiens. DR Ensembl-Tr; ENST00000361624; homo_sapiens. DR Ensembl-Tr; ENST00000361681; homo_sapiens. DR Ensembl-Tr; ENST00000361739; homo_sapiens. DR Ensembl-Tr; ENST00000361851; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX FH Key Location/Qualifiers FH FT source 1..16571 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="FTDNA 286814" FT /mol_type="genomic DNA" FT /note="ethnicity:Ashkenazi; origin_locality:Babruysk : FT Belarus" FT /db_xref="taxon:9606" FT /haplogroup="H7c2" FT D-loop complement(join(16026..16571,1..579)) FT tRNA 580..650 FT /product="tRNA-Phe" FT rRNA 651..1604 FT /product="12S ribosomal RNA" FT tRNA 1605..1673 FT /product="tRNA-Val" FT rRNA 1674..3231 FT /product="16S ribosomal RNA" FT tRNA 3232..3306 FT /product="tRNA-Leu" FT gene 3309..4264 FT /gene="ND1" FT CDS 3309..4264 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4263..4264,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:U5Z754" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:U5Z754" FT /protein_id="AOH34805.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPITISSIPPQT" FT tRNA 4265..4333 FT /product="tRNA-Ile" FT tRNA complement(4331..4402) FT /product="tRNA-Gln" FT tRNA 4404..4471 FT /product="tRNA-Met" FT gene 4472..5513 FT /gene="ND2" FT CDS 4472..5513 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5513,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXY9" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q7GXY9" FT /protein_id="AOH34806.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPFLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5514..5578 FT /product="tRNA-Trp" FT tRNA complement(5589..5657) FT /product="tRNA-Ala" FT tRNA complement(5659..5731) FT /product="tRNA-Asn" FT tRNA complement(5763..5828) FT /product="tRNA-Cys" FT tRNA complement(5828..5893) FT /product="tRNA-Tyr" FT gene 5906..7447 FT /gene="COX1" FT CDS 5906..7447 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:U5YWV7" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:U5YWV7" FT /protein_id="AOH34807.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7447..7518) FT /product="tRNA-Ser" FT tRNA 7520..7587 FT /product="tRNA-Asp" FT gene 7588..8271 FT /gene="COX2" FT CDS 7588..8271 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /db_xref="GOA:U5Z487" FT /db_xref="InterPro:IPR001505" FT /db_xref="InterPro:IPR002429" FT /db_xref="InterPro:IPR008972" FT /db_xref="InterPro:IPR011759" FT /db_xref="InterPro:IPR014222" FT /db_xref="InterPro:IPR034210" FT /db_xref="InterPro:IPR036257" FT /db_xref="UniProtKB/TrEMBL:U5Z487" FT /protein_id="AOH34808.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8297..8366 FT /product="tRNA-Lys" FT gene 8368..8574 FT /gene="ATP8" FT CDS 8368..8574 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /db_xref="GOA:U5YV54" FT /db_xref="InterPro:IPR001421" FT /db_xref="InterPro:IPR039017" FT /db_xref="UniProtKB/TrEMBL:U5YV54" FT /protein_id="AOH34809.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8529..9209 FT /gene="ATP6" FT CDS 8529..9209 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B1D3" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B1D3" FT /protein_id="AOH34810.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMTMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9209..9992 FT /gene="COX3" FT CDS 9209..9992 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9992,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AOH34811.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9993..10060 FT /product="tRNA-Gly" FT gene 10061..10406 FT /gene="ND3" FT CDS 10061..10406 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10406,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXZ5" FT /db_xref="InterPro:IPR000440" FT /db_xref="InterPro:IPR038430" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ5" FT /protein_id="AOH34812.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWTE" FT tRNA 10407..10471 FT /product="tRNA-Arg" FT gene 10472..10768 FT /gene="ND4L" FT CDS 10472..10768 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AOH34813.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10762..12139 FT /gene="ND4" FT CDS 10762..12139 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12139,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:H9EC08" FT /db_xref="InterPro:IPR000260" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="InterPro:IPR010227" FT /db_xref="UniProtKB/TrEMBL:H9EC08" FT /protein_id="AOH34814.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12140..12208 FT /product="tRNA-His" FT tRNA 12209..12267 FT /product="tRNA-Ser" FT tRNA 12268..12338 FT /product="tRNA-Leu" FT gene 12339..14150 FT /gene="ND5" FT CDS 12339..14150 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:U5ZC31" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:U5ZC31" FT /protein_id="AOH34815.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPASPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14151..14675) FT /gene="ND6" FT CDS complement(14151..14675) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /db_xref="GOA:U5Z977" FT /db_xref="InterPro:IPR001457" FT /db_xref="UniProtKB/TrEMBL:U5Z977" FT /protein_id="AOH34816.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14676..14744) FT /product="tRNA-Glu" FT gene 14749..15889 FT /gene="CYTB" FT CDS 14749..15889 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15889,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q6VLV1" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q6VLV1" FT /protein_id="AOH34817.1" FT /translation="MTPMRKTNPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15890..15955 FT /product="tRNA-Thr" FT tRNA complement(15957..16025) FT /product="tRNA-Pro" XX SQ Sequence 16571 BP; 5118 A; 5183 C; 2176 G; 4094 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtatgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgcctcatc ctattattta tcgcacctac gttcaatatt 180 acaggcgaac atacttacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattgaat gtctgcacag ccgctttcca cacagacatc ataacaaaaa atttccacca 300 aacccccccc ctccccccgc ttctggccac agcacttaaa cacatctctg ccaaacccca 360 aaaacaaaga accctaacac cagcctaacc agatttcaaa ttttatcttt tggcggtatg 420 cacttttaac agtcaccccc caactaacac attattttcc cctcccactc ccatactact 480 aatctcatca atacaacccc cgcccatcct acccagcaca cacacaccgc tgctaacccc 540 ataccccgaa ccaaccaaac cccaaagaca ccccccacag tttatgtagc ttacctcctc 600 aaagcaatac actgaaaatg tttagacggg ctcacatcac cccataaaca aataggtttg 660 gtcctagcct ttctattagc tcttagtaag attacacatg caagcatccc cgttccagtg 720 agttcaccct ctaaatcacc acgatcaaaa gggacaagca tcaagcacgc agcaatgcag 780 ctcaaaacgc ttagcctagc cacaccccca cgggaaacag cagtgattaa cctttagcaa 840 taaacgaaag tttaactaag ctatactaac cccagggttg gtcaatttcg tgccagccac 900 cgcggtcaca cgattaaccc aagtcaatag aagccggcgt aaagagtgtt ttagatcacc 960 ccctccccaa taaagctaaa actcacctga gttgtaaaaa actccagttg acacaaaata 1020 gactacgaaa gtggctttaa catatctgaa cacacaatag ctaagaccca aactgggatt 1080 agatacccca ctatgcttag ccctaaacct caacagttaa atcaacaaaa ctgctcgcca 1140 gaacactacg agccacagct taaaactcaa aggacctggc ggtgcttcat atccctctag 1200 aggagcctgt tctgtaatcg ataaaccccg atcaacctca ccacctcttg ctcagcctat 1260 ataccgccat cttcagcaaa ccctgatgaa ggctacaaag taagcgcaag tacccacgta 1320 aagacgttag gtcaaggtgt agcccatgag gtggcaagaa atgggctaca ttttctaccc 1380 cagaaaacta cgatagccct tatgaaactt aagggtcgaa ggtggattta gcagtaaact 1440 gagagtagag tgcttagttg aacagggccc tgaagcgcgt acacaccgcc cgtcaccctc 1500 ctcaagtata cttcaaagga catttaacta aaacccctac gcatttatat agaggagaca 1560 agtcgtaaca tggtaagtgt actggaaagt gcacttggac gaaccagagt gtagcttaac 1620 acaaagcacc caacttacac ttaggagatt tcaacttaac ttgaccgctc tgagctaaac 1680 ctagccccaa acccactcca ccttactacc agacaacctt agccaaacca tttacccaaa 1740 taaagtatag gcgatagaaa ttgaaacctg gcgcaataga tatagtaccg caagggaaag 1800 atgaaaaatt ataaccaagc ataatatagc aaggactaac ccctatacct tctgcataat 1860 gaattaacta gaaataactt tgcaaggaga gccaaagcta agacccccga aaccagacga 1920 gctacctaag aacagctaaa agagcacacc cgtctatgta gcaaaatagt gggaagattt 1980 ataggtagag gcgacaaacc taccgagcct ggtgatagct ggttgtccaa gatagaatct 2040 tagttcaact ttaaatttgc ccacagaacc ctctaaatcc ccttgtaaat ttaactgtta 2100 gtccaaagag gaacagctct ttggacacta ggaaaaaacc ttgtagagag agtaaaaaat 2160 ttaacaccca tagtaggcct aaaagcagcc accaattaag aaagcgttca agctcaacac 2220 ccactaccta aaaaatccca aacatataac tgaactcctc acacccaatt ggaccaatct 2280 atcaccctat agaagaacta atgttagtat aagtaacatg aaaacattct cctccgcata 2340 agcctgcgtc agattaaaac actgaactga caattaacag cccaatatct acaatcaacc 2400 aacaagtcat tattaccctc actgtcaacc caacacaggc atgctcataa ggaaaggtta 2460 aaaaaagtaa aaggaactcg gcaaatctta ccccgcctgt ttaccaaaaa catcacctct 2520 agcatcacca gtattagagg caccgcctgc ccagtgacac atgtttaacg gccgcggtac 2580 cctaaccgtg caaaggtagc ataatcactt gttccttaaa tagggacctg tatgaatggc 2640 tccacgaggg ttcagctgtc tcttactttt aaccagtgaa attgacctgc ccgtgaagag 2700 gcgggcataa cacagcaaga cgagaagacc ctatggagct ttaatttatt aatgcaaaca 2760 gtacctaaca aacccacagg tcctaaacta ccaaacctgc attaaaaatt tcggttgggg 2820 cgacctcgga gcagaaccca acctccgagc agtacatgct aagacttcac cagtcaaagc 2880 gaactactat actcaattga tccaataact tgaccaacgg aacaagttac cctagggata 2940 acagcgcaat cctattctag agtccatatc aacaataggg tttacgacct cgatgttgga 3000 tcaggacatc ccgatggtgc agccgctatt aaaggttcgt ttgttcaacg attaaagtcc 3060 tacgtgatct gagttcagac cggagtaatc caggtcggtt tctatctact tcaaattcct 3120 ccctgtacga aaggacaaga gaaataaggc ctacttcaca aagcgccttc ccccgtaaat 3180 gatatcatct caacttagta ttatacccac acccacccaa gaacagggtt tgttaagatg 3240 gcagagcccg gtaatcgcat aaaacttaaa actttacagt cagaggttca attcctcttc 3300 ttaacaacat acccatggcc aacctcctac tcctcattgt acccattcta atcgcaatgg 3360 cattcctaat gcttaccgaa cgaaaaattc taggctatat acaactacgc aaaggcccca 3420 acgttgtagg cccctacggg ctactacaac ccttcgctga cgccataaaa ctcttcacca 3480 aagagcccct aaaacccgcc acatctacca tcaccctcta catcaccgcc ccgaccttag 3540 ctctcaccat cgctcttcta ctatgaaccc ccctccccat acccaacccc ctggtcaacc 3600 tcaacctagg cctcctattt attctagcca cctctagcct agccgtttac tcaatcctct 3660 gatcagggtg agcatcaaac tcaaactacg ccctgatcgg cgcactgcga gcagtagccc 3720 aaacaatctc atatgaagtc accctagcca tcattctact atcaacatta ctaataagtg 3780 gctcctttaa cctctccacc cttatcacaa cacaagaaca cctctgatta ctcctgccat 3840 catgaccctt ggccataata tgatttatct ccacactagc agagaccaac cgaaccccct 3900 tcgaccttgc cgaaggggag tccgaactag tctcaggctt caacatcgaa tacgccgcag 3960 gccccttcgc cctattcttc atagccgaat acacaaacat tattataata aacaccctca 4020 ccactacaat cttcctagga acaacatatg acgcactctc ccctgaactc tacacaacat 4080 attttgtcac caagacccta cttctaacct ccctgttctt atgaattcga acagcatacc 4140 cccgattccg ctacgaccaa ctcatacacc tcctatgaaa aaacttccta ccactcaccc 4200 tagcattact tatatgatat gtctccatac ccattacaat ctccagcatt ccccctcaaa 4260 cctaagaaat atgtctgata aaagagttac tttgatagag taaataatag gagcttaaac 4320 ccccttattt ctaggactat gagaatcgaa cccatccctg agaatccaaa attctccgtg 4380 ccacctatca caccccatcc taaagtaagg tcagctaaat aagctatcgg gcccataccc 4440 cgaaaatgtt ggttataccc ttcccgtact aattaatccc ctggcccaac ccgtcatcta 4500 ctctaccatc tttgcaggca cactcatcac agcgctaagc tcgcactgat tttttacctg 4560 agtaggccta gaaataaaca tgctagcttt tattccagtt ctaaccaaaa aaataaaccc 4620 tcgttccaca gaagctgcca tcaagtattt cctcacgcaa gcaaccgcat ccataatcct 4680 tctaatagct atcctcttca acaatatact ctccggacaa tgaaccataa ccaatactac 4740 caatcaatac tcatcattaa taatcataat ggctatagca ataaaactag gaatggcccc 4800 ctttcacttc tgagtcccag aggttaccca aggcacccct ctgacatccg gcctgcttct 4860 tctcacatga caaaaactag cccccatctc aatcatatac caaatctctc cctcactaaa 4920 cgtaagcctt ctcctcactc tctcaatctt atccatcata gcaggcagtt gaggtggatt 4980 aaaccaaacc cagctacgca aaatcttagc atactcctca attacccaca taggatgaat 5040 aatagcagtt ctaccgtaca accctaacat aaccattctt aatttaacta tttatattat 5100 cctaactact accgcattcc tactactcaa cttaaactcc agcaccacga ccctactact 5160 atctcgcacc tgaaacaagc taacatgact aacaccctta attccatcca ccctcctctc 5220 cctaggaggc ctgcccccgc taaccggctt tttgcccaaa tgggccatta tcgaagaatt 5280 cacaaaaaac aatagcctca tcatccccac catcatagcc accatcaccc tccttaacct 5340 ctacttctac ctacgcctaa tctactccac ctcaatcaca ctactcccca tatctaacaa 5400 cgtaaaaata aaatgacagt ttgaacatac aaaacccacc ccattcctcc ccacactcat 5460 cgcccttacc acgctactcc tacctatctc cccttttata ctaataatct tatagaaatt 5520 taggttaaat acagaccaag agccttcaaa gccctcagta agttgcaata cttaatttct 5580 gtaacagcta aggactgcaa aaccccactc tgcatcaact gaacgcaaat cagccacttt 5640 aattaagcta agcccttact agaccaatgg gacttaaacc cacaaacact tagttaacag 5700 ctaagcaccc taatcaactg gcttcaatct acttctcccg ccgccgggaa aaaaggcggg 5760 agaagccccg gcaggtttga agctgcttct tcgaatttgc aattcaatat gaaaatcacc 5820 tcggagctgg taaaaagagg cctaacccct gtctttagat ttacagtcca atgcttcact 5880 cagccatttt acctcacccc cactgatgtt cgccgaccgt tgactattct ctacaaacca 5940 caaagacatt ggaacactat acctattatt cggcgcatga gctggagtcc taggcacagc 6000 tctaagcctc cttattcgag ccgagctggg ccagccaggc aaccttctag gtaacgacca 6060 catctacaac gttatcgtca cagcccatgc atttgtaata atcttcttca tagtaatacc 6120 catcataatc ggaggctttg gcaactgact agttccccta ataatcggtg cccccgatat 6180 ggcgtttccc cgcataaaca acataagctt ctgactctta cctccctctc tcctactcct 6240 gctcgcatct gctatagtgg aggccggagc aggaacaggt tgaacagtct accctccatt 6300 agcagggaac tactcccacc ctggagcctc cgtagaccta accatcttct ccttacacct 6360 agcaggtgtc tcctctatct taggggccat caatttcatc acaacaatta tcaatataaa 6420 accccctgcc ataacccaat accaaacgcc cctcttcgtc tgatccgtcc taatcacagc 6480 agtcctactt ctcctatctc tcccagtcct agctgctggc atcactatac tactaacaga 6540 ccgcaacctc aacaccacct tcttcgaccc cgccggagga ggagacccca ttctatacca 6600 acacctattc tgatttttcg gtcaccctga agtttatatt cttatcctac caggcttcgg 6660 aataatctcc catattgtaa cttactactc cggaaaaaaa gaaccatttg gatacatagg 6720 tatggtctga gctatgatat caattggctt cctagggttt atcgtgtgag cacaccatat 6780 atttacagta ggaatagacg tagacacacg agcatatttc acctccgcta ccataatcat 6840 cgctatcccc accggcgtca aagtatttag ctgactcgcc acactccacg gaagcaatat 6900 gaaatgatct gctgcagtgc tctgagccct aggattcatc tttcttttca ccgtaggtgg 6960 cctgactggc attgtattag caaactcatc actagacatc gtactacacg acacgtacta 7020 cgttgtagcc cacttccact atgtcctatc aataggagct gtatttgcca tcataggagg 7080 cttcattcac tgatttcccc tattctcagg ctacacccta gaccaaacct acgccaaaat 7140 ccatttcact atcatattca tcggcgtaaa tctaactttc ttcccacaac actttctcgg 7200 cctatccgga atgccccgac gttactcgga ctaccccgat gcatacacca catgaaacat 7260 cctatcatct gtaggctcat tcatttctct aacagcagta atattaataa ttttcatgat 7320 ttgagaagcc ttcgcttcga agcgaaaagt cctaatagta gaagaaccct ccataaacct 7380 ggagtgacta tatggatgcc ccccacccta ccacacattc gaagaacccg tatacataaa 7440 atctagacaa aaaaggaagg aatcgaaccc cccaaagctg gtttcaagcc aaccccatgg 7500 cctccatgac tttttcaaaa aggtattaga aaaaccattt cataactttg tcaaagttaa 7560 attataggct aaatcctata tatcttaatg gcacatgcag cgcaagtagg tctacaagac 7620 gctacttccc ctatcataga agagcttatc acctttcatg atcacgccct cataatcatt 7680 ttccttatct gcttcctagt cctgtatgcc cttttcctaa cactcacaac aaaactaact 7740 aatactaaca tctcagacgc tcaggaaata gaaaccgtct gaactatcct gcccgccatc 7800 atcctagtcc tcatcgccct cccatcccta cgcatccttt acataacaga cgaggtcaac 7860 gatccctccc ttaccatcaa atcaattggc caccaatggt actgaaccta cgagtacacc 7920 gactacggcg gactaatctt caactcctac atacttcccc cattattcct agaaccaggc 7980 gacctgcgac tccttgacgt tgacaatcga gtagtactcc cgattgaagc ccccattcgt 8040 ataataatta catcacaaga cgtcttgcac tcatgagctg tccccacatt aggcttaaaa 8100 acagatgcaa ttcccggacg tctaaaccaa accactttca ccgctacacg accgggggta 8160 tactacggtc aatgctctga aatctgtgga gcaaaccaca gtttcatgcc catcgtccta 8220 gaattaattc ccctaaaaat ctttgaaata gggcccgtat ttaccctata gcaccccctc 8280 taccccctct agagcccact gtaaagctaa cttagcatta accttttaag ttaaagatta 8340 agagaaccaa cacctcttta cagtgaaatg ccccaactaa atactaccgt atggcccacc 8400 ataattaccc ccatactcct tacactattc ctcatcaccc aactaaaaat attaaacaca 8460 aactaccacc tacctccctc accaaagccc ataaaaataa aaaattataa caaaccctga 8520 gaaccaaaat gaacgaaaat ctgttcgctt cattcattgc ccccacaatc ctaggcctac 8580 ccgccgcagt actgatcatt ctatttcccc ctctattgat ccccacctcc aaatatctca 8640 tcaacaaccg actaatcacc acccaacaat gactaatcaa actaacctca aaacaaatga 8700 taaccataca caacactaaa ggacgaacct gatctcttat actagtatcc ttaatcattt 8760 ttattgccac aactaacctc ctcggactcc tgcctcactc atttacacca accacccaac 8820 tatctataaa cctagccatg gccatcccct tatgagcggg cgcagtgatt ataggctttc 8880 gctctaagat taaaaatgcc ctagcccact tcttaccaca aggcacacct acacccctta 8940 tccccatact agttattatc gaaaccatca gcctactcat tcaaccaata gccctggccg 9000 tacgcctaac cgctaacatt actgcaggcc acctactcat gcacctaatt ggaagcgcca 9060 ccctagcaat atcaaccatt aaccttccct ctacacttat catcttcaca attctaattc 9120 tactgactat cctagaaatc gctgtcgcct taatccaagc ctacgttttc acacttctag 9180 taagcctcta cctgcacgac aacacataat gacccaccaa tcacatgcct atcatatagt 9240 aaaacccagc ccatgacccc taacaggggc cctctcagcc ctcctaatga cctccggcct 9300 agccatgtga tttcacttcc actccataac gctcctcata ctaggcctac taaccaacac 9360 actaaccata taccaatgat ggcgcgatgt aacacgagaa agcacatacc aaggccacca 9420 cacaccacct gtccaaaaag gccttcgata cgggataatc ctatttatta cctcagaagt 9480 ttttttcttc gcaggatttt tctgagcctt ttaccactcc agcctagccc ctacccccca 9540 attaggaggg cactggcccc caacaggcat caccccgcta aatcccctag aagtcccact 9600 cctaaacaca tccgtattac tcgcatcagg agtatcaatc acctgagctc accatagtct 9660 aatagaaaac aaccgaaacc aaataattca agcactgctt attacaattt tactgggtct 9720 ctattttacc ctcctacaag cctcagagta cttcgagtct cccttcacca tttccgacgg 9780 catctacggc tcaacatttt ttgtagccac aggcttccac ggacttcacg tcattattgg 9840 ctcaactttc ctcactatct gcttcatccg ccaactaata tttcacttta catccaaaca 9900 tcactttggc ttcgaagccg ccgcctgata ctggcatttt gtagatgtgg tttgactatt 9960 tctgtatgtc tccatctatt gatgagggtc ttactctttt agtataaata gtaccgttaa 10020 cttccaatta actagttttg acaacattca aaaaagagta ataaacttcg ccttaatttt 10080 aataatcaac accctcctag ccttactact aataattatt acattttgac taccacaact 10140 caacggctac atagaaaaat ccacccctta cgagtgcggc ttcgacccta tatcccccgc 10200 ccgcgtccct ttctccataa aattcttctt agtagctatt accttcttat tatttgatct 10260 agaaattgcc ctccttttac ccctaccatg agccctacaa acaactaacc tgccactaat 10320 agttatgtca tccctcttat taatcatcat cctagcccta agtctggcct atgagtgact 10380 acaaaaagga ttagactgaa ccgaattggt atatagttta aacaaaacga atgatttcga 10440 ctcattaaat tatgataatc atatttacca aatgcccctc atttacataa atattatact 10500 agcatttacc atctcacttc taggaatact agtatatcgc tcacacctca tatcctccct 10560 actatgccta gaaggaataa tactatcgct gttcattata gctactctca taaccctcaa 10620 cacccactcc ctcttagcca atattgtgcc tattgccata ctagtctttg ccgcctgcga 10680 agcagcggtg ggcctagccc tactagtctc aatctccaac acatatggcc tagactacgt 10740 acataaccta aacctactcc aatgctaaaa ctaatcgtcc caacaattat attactacca 10800 ctgacatgac tttccaaaaa acacataatt tgaatcaaca caaccaccca cagcctaatt 10860 attagcatca tccctctact attttttaac caaatcaaca acaacctatt tagctgttcc 10920 ccaacctttt cctccgaccc cctaacaacc cccctcctaa tactaactac ctgactccta 10980 cccctcacaa tcatggcaag ccaacgccac ttatccagtg aaccactatc acgaaaaaaa 11040 ctctacctct ctatactaat ctccctacaa atctccttaa ttataacatt cacagccaca 11100 gaactaatca tattttatat cttcttcgaa accacactta tccccacctt ggctatcatc 11160 acccgatgag gcaaccagcc agaacgcctg aacgcaggca catacttcct attctacacc 11220 ctagtaggct cccttcccct actcatcgca ctaatttaca ctcacaacac cctaggctca 11280 ctaaacattc tactactcac tctcactgcc caagaactat caaactcctg agccaacaac 11340 ttaatatgac tagcttacac aatagctttt atagtaaaga tacctcttta cggactccac 11400 ttatgactcc ctaaagccca tgtcgaagcc cccatcgctg ggtcaatagt acttgccgca 11460 gtactcttaa aactaggcgg ctatggtata atacgcctca cactcattct caaccccctg 11520 acaaaacaca tagcctaccc cttccttgta ctatccctat gaggcataat tataacaagc 11580 tccatctgcc tacgacaaac agacctaaaa tcgctcattg catactcttc aatcagccac 11640 atagccctcg tagtaacagc cattctcatc caaaccccct gaagcttcac cggcgcagtc 11700 attctcataa tcgcccacgg gcttacatcc tcattactat tctgcctagc aaactcaaac 11760 tacgaacgca ctcacagtcg catcataatc ctctctcaag gacttcaaac tctactccca 11820 ctaatagctt tttgatgact tctagcaagc ctcgctaacc tcgccttacc ccccactatt 11880 aacctactgg gagaactctc tgtgctagta accacgttct cctgatcaaa tatcactctc 11940 ctacttacag gactcaacat actagtcaca gccctatact ccctctacat atttaccaca 12000 acacaatggg gctcactcac ccaccacatt aacaacataa aaccctcatt cacacgagaa 12060 aacaccctca tgttcataca cctatccccc attctcctcc tatccctcaa ccccgacatc 12120 attaccgggt tttcctcttg taaatatagt ttaaccaaaa catcagattg tgaatctgac 12180 aacagaggct tacgacccct tatttaccga gaaagctcac aagaactgct aactcatgcc 12240 cccatgtcta acaacatggc tttctcaact tttaaaggat aacagctatc cattggtctt 12300 aggccccaaa aattttggtg caactccaaa taaaagtaat aaccatgcac actactataa 12360 ccaccctaac cctgacttcc ctaattcccc ccatccttac caccctcgtt aaccctaaca 12420 aaaaaaactc atacccccat tatgtaaaat ccattgtcgc atccaccttt attatcagtc 12480 tcttccccac aacaatattc atgtgcctag accaagaagt tattatctcg aactgacact 12540 gagccacaac ccaaacaacc cagctctccc taagcttcaa actagactac ttctccataa 12600 tattcatccc tgtagcattg ttcgttacat ggtccatcat agaattctca ctgtgatata 12660 taaactcaga cccaaacatt aatcagttct tcaaatatct actcatcttc ctaattacca 12720 tactaatctt agttaccgct aacaacctat tccaactgtt catcggctga gagggcgtag 12780 gaattatatc cttcttgctc atcagttgat gatacgcccg agcagatgcc aacacagcag 12840 ccattcaagc aatcctatac aaccgtatcg gcgatatcgg tttcatcctc gccttagcat 12900 gatttatcct acactccaac tcatgagacc cacaacaaat agcccttcta aacgctaatc 12960 caagcctcac cccactacta ggcctcctcc tagcagcagc aggcaaatca gcccaattag 13020 gtctccaccc ctgactcccc tcagccatag aaggccccac cccagtctca gccctactcc 13080 actcaagcac tatagttgta gcaggaatct tcttactcat ccgcttccac cccctagcag 13140 aaaatagccc actaatccaa actctaacac tatgcttagg cgctatcacc actctgttcg 13200 cagcagtctg cgcccttaca caaaatgaca tcaaaaaaat cgtagccttc tccacttcaa 13260 gtcaactagg actcataata gttacaatcg gcatcaacca accacaccta gcattcctgc 13320 acatctgtac ccacgccttc ttcaaagcca tactatttat gtgctccggg tccatcatcc 13380 acaaccttaa caatgaacaa gatattcgaa aaataggagg actactcaaa accatacctc 13440 tcacttcaac ctccctcacc attggcagcc tagcattagc aggaatacct ttcctcacag 13500 gtttctactc caaagaccac atcatcgaaa ccgcaaacat atcatacaca aacgcctgag 13560 ccctatctat tactctcatc gctacctccc tgacaagcgc ctatagcact cgaataattc 13620 ttctcaccct aacaggtcaa cctcgcttcc ccacccttac taacattaac gaaaataacc 13680 ccaccctact aaaccccatt aaacgcctgg cagccggaag cctattcgca ggatttctca 13740 ttactaacaa catttccccc gcatccccct tccaaacaac aatccccctc tacctaaaac 13800 tcacagccct cgctgtcact ttcctaggac ttctaacagc cctagacctc aactacctaa 13860 ccaacaaact taaaataaaa tccccactat gcacatttta tttctccaac atactcggat 13920 tctaccctag catcacacac cgcacaatcc cctatctagg tcttcttacg agccaaaacc 13980 tgcccctact cctcctagac ctaacctgac tagaaaagct attacctaaa acaatttcac 14040 agcaccaaat ctccacctcc atcatcacct caacccaaaa aggcataatt aaactttact 14100 tcctctcttt cttcttccca ctcatcctaa ccctactcct aatcacataa cctattcccc 14160 cgagcaatct caattacaat atatacacca acaaacaatg ttcaaccagt aactactact 14220 aatcaacgcc cataatcata caaagccccc gcaccaatag gatcctcccg aatcaaccct 14280 gacccctctc cttcataaat tattcagctt cctacactat taaagtttac cacaaccacc 14340 accccatcat actctttcac ccacagcacc aatcctacct ccatcgctaa ccccactaaa 14400 acactcacca agacctcaac ccctgacccc catgcctcag gatactcctc aatagccatc 14460 gctgtagtat atccaaagac aaccatcatt ccccctaaat aaattaaaaa aactattaaa 14520 cccatataac ctcccccaaa attcagaata ataacacacc cgaccacacc gctaacaatc 14580 aatactaaac ccccataaat aggagaaggc ttagaagaaa accccacaaa ccccattact 14640 aaacccacac tcaacagaaa caaagcatac atcattattc tcgcacggac tacaaccacg 14700 accaatgata tgaaaaacca tcgttgtatt tcaactacaa gaacaccaat gaccccaata 14760 cgcaaaacta accccctaat aaaattaatt aaccactcat tcatcgacct ccccacccca 14820 tccaacatct ccgcatgatg aaacttcggc tcactccttg gcgcctgcct gatcctccaa 14880 atcaccacag gactattcct agccatgcac tactcaccag acgcctcaac cgccttttca 14940 tcaatcgccc acatcactcg agacgtaaat tatggctgaa tcatccgcta ccttcacgcc 15000 aatggcgcct caatattctt tatctgcctc ttcctacaca tcgggcgagg cctatattac 15060 ggatcatttc tctactcaga aacctgaaac atcggcatta tcctcctgct tgcaactata 15120 gcaacagcct tcataggcta tgtcctcccg tgaggccaaa tatcattctg aggggccaca 15180 gtaattacaa acttactatc cgccatccca tacattggga cagacctagt tcaatgaatc 15240 tgaggaggct actcagtaga cagtcccacc ctcacacgat tctttacctt tcacttcatc 15300 ttgcccttca ttattgcagc cctagcagca ctccacctcc tattcttgca cgaaacggga 15360 tcaaacaacc ccctaggaat cacctcccat tccgataaaa tcaccttcca cccttactac 15420 acaatcaaag acgccctcgg cttacttctc ttccttctct ccttaatgac attaacacta 15480 ttctcaccag acctcctagg cgacccagac aattataccc tagccaaccc cttaaacacc 15540 cctccccaca tcaagcccga atgatatttc ctattcgcct acacaattct ccgatccgtc 15600 cctaacaaac taggaggcgt ccttgcccta ttactatcca tcctcatcct agcaataatc 15660 cccatcctcc atatatccaa acaacaaagc ataatatttc gcccactaag ccaatcactt 15720 tattgactcc tagccgcaga cctcctcatt ctaacctgaa tcggaggaca accagtaagc 15780 taccctttta ccatcattgg acaagtagca tccgtactat acttcacaac aatcctaatc 15840 ctaataccaa ctatctccct aattgaaaac aaaatactca aatgggcctg tccttgtagt 15900 ataaactaat acaccagtct tgtaaaccgg agatgaaaac ctttttccaa ggacaaatca 15960 gagaaaaagt ctttaactcc accattagca cccaaagcta agattctaat ttaaactatt 16020 ctctgttctt tcatggggaa gcagatttgg gtaccaccca agtattgact cacccatcaa 16080 caaccgctat gtatttcgta cattactgcc agccaccatg aatattgtac ggtaccataa 16140 atacttgacc acctgtagta cataaaaacc caatccacat caaaaccccc tccccatgct 16200 tacaagcaag tacagcaatc aaccctcaac tatcacacat caactgcaac tccaaagcca 16260 cccctcaccc actaggatac caacaaacct acccaccctt aacagtacat agtacataaa 16320 gccatttacc gtacatagca cattacagtc aaatcccttc tcgtccccat ggatgacccc 16380 cctcagatag gggtcccttg accaccatcc tccgtgaaat caatatcccg cacaagagtg 16440 ctactctcct cgctccgggc ccataacact tgggggtagc taaagtgaac tgtatccgac 16500 atctggttcc tacttcaggg ccataaagcc taaatagccc acacgttccc cttaaataag 16560 acatcacgat g 16571 // ID KX694123; SV 1; linear; genomic DNA; STD; HUM; 786 BP. XX AC KX694123; XX DT 29-SEP-2017 (Rel. 134, Created) DT 29-SEP-2017 (Rel. 134, Last updated, Version 1) XX DE Homo sapiens clone A_111538_00557 nonfunctional MHC class I antigen (HLA-A) DE gene, partial sequence. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-786 RA Cereb N., Yang S.Y.; RT "HLA new alleles found by Histogenetics"; RL Unpublished. XX RN [2] RP 1-786 RA Cereb N., Yang S.Y.; RT ; RL Submitted (08-AUG-2016) to the INSDC. RL Histogenetics, 300 Executive Blvd, Ossining, NY 10562, USA XX DR MD5; 5f011e962f2da8331d812412591aea1a. XX FH Key Location/Qualifiers FH FT source 1..786 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="A_111538_00557" FT /db_xref="taxon:9606" FT gene <1..>786 FT /gene="HLA-A" FT misc_feature <1..>786 FT /gene="HLA-A" FT /note="nonfunctional MHC class I antigen due to mutation" FT exon 1..268 FT /gene="HLA-A" FT /number=2 FT gap 269..510 FT /estimated_length=242 FT exon 511..786 FT /gene="HLA-A" FT /number=3 XX SQ Sequence 786 BP; 106 A; 162 C; 197 G; 79 T; 242 other; gctcccactc catgaggtat ttcaccacat ccgtgtcccg gcccggccgc ggggagcccc 60 gcttcatcgc cgtgggctac gtggacgaca cgcagttcgt gcggtttgac agcgacgccg 120 cgagccagag gatggagccg cgggcaccgt ggatagagca ggaggggccg gagtattggg 180 acctgcagac acggaatgtg aaggcccagt cagactgacc gagcgaacct ggggaccctg 240 cgcggctact acaaccagag cgaggccgnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 420 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn gttctcacac catccagatg atgtatggct 540 gcgacgtggg gtcggacggg cgcttcctcc gcgggtaccg gcaggacgcc tacgacggca 600 aggattacat cgccttgaac gaggacctgc gctcttggac cgcggcggac atggcggctc 660 agatcaccca gcgcaagtgg gaggcggccc gtgtggcgga gcagttgaga gcctacctgg 720 agggcacgtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag acgctgcagc 780 gcacgg 786 // ID KX694124; SV 1; linear; genomic DNA; STD; HUM; 784 BP. XX AC KX694124; XX DT 29-SEP-2017 (Rel. 134, Created) DT 29-SEP-2017 (Rel. 134, Last updated, Version 1) XX DE Homo sapiens clone C_111539_00642 nonfunctional MHC class I antigen (HLA-C) DE gene, partial sequence. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-784 RA Cereb N., Yang S.Y.; RT "HLA new alleles found by Histogenetics"; RL Unpublished. XX RN [2] RP 1-784 RA Cereb N., Yang S.Y.; RT ; RL Submitted (08-AUG-2016) to the INSDC. RL Histogenetics, 300 Executive Blvd, Ossining, NY 10562, USA XX DR MD5; 83ae966fa6b8b591404ef0f8185ede6a. XX FH Key Location/Qualifiers FH FT source 1..784 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="C_111539_00642" FT /db_xref="taxon:9606" FT gene <1..>784 FT /gene="HLA-C" FT misc_feature <1..>784 FT /gene="HLA-C" FT /note="nonfunctional MHC class I antigen due to mutation" FT exon 1..266 FT /gene="HLA-C" FT /number=2 FT gap 267..508 FT /estimated_length=242 FT exon 509..784 FT /gene="HLA-C" FT /number=3 XX SQ Sequence 784 BP; 107 A; 165 C; 197 G; 73 T; 242 other; gctcccactc catgaggtat ttctacaccg ctgtgtcccg gcccggccgc ggggagcccc 60 acttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120 cgagtccgag aggggagccg cgggcgccgt gggtggagca ggaggggccg gagtattggg 180 accgggagac acagaagtac aagcgccagg cacagactga ccgagcctgc ggaacctgcg 240 cggctactac aaccagagcg aggccannnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 420 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480 nnnnnnnnnn nnnnnnnnnn nnnnnnnngg tctcacatca tccagaggat gtatggctgc 540 gacgtggggc ccgacgggcg cctcctccgc gggtatgacc agtacgccta cgacggcaag 600 gattacatcg ccctgaacga ggatctgcgc tcctggaccg ccgcggacac ggcggctcag 660 atcacccagc gcaagtggga ggcggcccgt gaggcggagc agctgagagc ctacctggag 720 ggcctgtgcg tggagtggct ccgcagatac ctgaagaatg ggaaggagac gctgcagcgc 780 gcgg 784 // ID KX694125; SV 1; linear; genomic DNA; STD; HUM; 269 BP. XX AC KX694125; XX DT 29-SEP-2017 (Rel. 134, Created) DT 29-SEP-2017 (Rel. 134, Last updated, Version 1) XX DE Homo sapiens clone DQB1_111540_00169 nonfunctional MHC class II antigen DE (HLA-DQB1) gene, partial sequence. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-269 RA Cereb N., Yang S.Y.; RT "HLA new alleles found by Histogenetics"; RL Unpublished. XX RN [2] RP 1-269 RA Cereb N., Yang S.Y.; RT ; RL Submitted (08-AUG-2016) to the INSDC. RL Histogenetics, 300 Executive Blvd, Ossining, NY 10562, USA XX DR MD5; 85dac911b6274bf4168cf3b3f3eff5c8. XX FH Key Location/Qualifiers FH FT source 1..269 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="DQB1_111540_00169" FT /db_xref="taxon:9606" FT gene <1..>269 FT /gene="HLA-DQB1" FT exon 1..269 FT /gene="HLA-DQB1" FT /number=2 FT misc_feature <1..>269 FT /gene="HLA-DQB1" FT /note="nonfunctional MHC class II antigen due to mutation" XX SQ Sequence 269 BP; 61 A; 65 C; 100 G; 43 T; 0 other; aggatttcgt gtaccagttt aagggcatgg ctacttcacc aacgggacgg agcgcgtgcg 60 tcttgtaacc agacacatct ataaccgaga ggagtacgcg cgcttcgaca gcgacgtggg 120 ggtgtaccgg gcggtgacgc cgcaggggcg gcctgttgcc gagtactgga acagccagaa 180 ggaagtcctg gagaggaccc gggcggagtt ggacacggtg tgcagacaca actacgaggt 240 ggggtaccgc gggatcctgc agaggagag 269 // ID KX694126; SV 1; linear; genomic DNA; STD; HUM; 269 BP. XX AC KX694126; XX DT 29-SEP-2017 (Rel. 134, Created) DT 29-SEP-2017 (Rel. 134, Last updated, Version 1) XX DE Homo sapiens clone DRB1_111541_00321 MHC class II antigen-like (HLA-DRB1) DE gene, partial sequence. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-269 RA Cereb N., Yang S.Y.; RT "HLA new alleles found by Histogenetics"; RL Unpublished. XX RN [2] RP 1-269 RA Cereb N., Yang S.Y.; RT ; RL Submitted (08-AUG-2016) to the INSDC. RL Histogenetics, 300 Executive Blvd, Ossining, NY 10562, USA XX DR MD5; 863d129803c15b7ae76d077d059377fd. XX FH Key Location/Qualifiers FH FT source 1..269 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="DRB1_111541_00321" FT /db_xref="taxon:9606" FT gene <1..>269 FT /gene="HLA-DRB1" FT exon 1..269 FT /gene="HLA-DRB1" FT /number=2 FT misc_feature <1..>269 FT /gene="HLA-DRB1" FT /note="similar to MHC class II antigen" XX SQ Sequence 269 BP; 58 A; 62 C; 100 G; 49 T; 0 other; cacgtttcct gtggcagggt aagtataagt gtcatttctt caacgggacg gagcgggtgc 60 agttcctgga aagactcttc tataaccagg aggagttcgt gcgcttcgac agcgacgtgg 120 gggagtaccg ggcggtgacg gagctagggc ggcctgtcgc gagtcctgga acagccagaa 180 ggacatcctg gaggacaggc ggggccaggt ggacaccgtg tgcagacaca actacggggt 240 tggtgagagc ttcacagtgc agcggcgag 269 // ID KX694127; SV 1; linear; genomic DNA; STD; HUM; 262 BP. XX AC KX694127; XX DT 29-SEP-2017 (Rel. 134, Created) DT 29-SEP-2017 (Rel. 134, Last updated, Version 1) XX DE Homo sapiens clone DPB1_111542_00568 nonfunctional MHC class II antigen DE (HLA-DPB1) gene, partial sequence. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-262 RA Cereb N., Yang S.Y.; RT "HLA new alleles found by Histogenetics"; RL Unpublished. XX RN [2] RP 1-262 RA Cereb N., Yang S.Y.; RT ; RL Submitted (08-AUG-2016) to the INSDC. RL Histogenetics, 300 Executive Blvd, Ossining, NY 10562, USA XX DR MD5; a9f5ed0d24803cd37a834167847d2c95. XX FH Key Location/Qualifiers FH FT source 1..262 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="DPB1_111542_00568" FT /db_xref="taxon:9606" FT gene <1..>262 FT /gene="HLA-DPB1" FT exon 1..262 FT /gene="HLA-DPB1" FT /number=2 FT misc_feature <1..>262 FT /gene="HLA-DPB1" FT /note="nonfunctional MHC class II antigen due to mutation" XX SQ Sequence 262 BP; 60 A; 66 C; 97 G; 39 T; 0 other; agaattacct tttccaggga cggcaggaat gacgcgttta atgggacaca gcgcttcctg 60 gagagataca tctacaaccg ggaggagttc gcgcgcttcg acagcgacgt gggggagttc 120 cgggcggtga cggagctggg gcggcctgct gcggagtact ggaacagcca gaaggacatc 180 ctggaggaga agcgggcagt gccggacagg atgtgcagac acaactacga gctgggcggg 240 cccatgaccc tgcagcgccg ag 262 // ID KX694128; SV 1; linear; genomic DNA; STD; HUM; 792 BP. XX AC KX694128; XX DT 29-SEP-2017 (Rel. 134, Created) DT 29-SEP-2017 (Rel. 134, Last updated, Version 1) XX DE Homo sapiens clone A_111543_00558 MHC class I antigen-like (HLA-A) gene, DE partial sequence. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-792 RA Cereb N., Yang S.Y.; RT "HLA new alleles found by Histogenetics"; RL Unpublished. XX RN [2] RP 1-792 RA Cereb N., Yang S.Y.; RT ; RL Submitted (08-AUG-2016) to the INSDC. RL Histogenetics, 300 Executive Blvd, Ossining, NY 10562, USA XX DR MD5; e53c0efea9b11b4af01c7b1babe4c4eb. XX FH Key Location/Qualifiers FH FT source 1..792 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="A_111543_00558" FT /db_xref="taxon:9606" FT gene <1..>792 FT /gene="HLA-A" FT misc_feature <1..>792 FT /gene="HLA-A" FT /note="similar to MHC class I antigen" FT exon 1..270 FT /gene="HLA-A" FT /number=2 FT gap 271..512 FT /estimated_length=242 FT exon 513..792 FT /gene="HLA-A" FT /number=3 XX SQ Sequence 792 BP; 112 A; 162 C; 195 G; 81 T; 242 other; gctctcactc catgaggtat ttcttcacat ccgtgtcccg gcccggccgc ggggagcccc 60 gcttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120 cgagccagag gatggagccg cgggcgccgt ggatagagca ggagggtccg gagtattggg 180 acggggagac acggaaagtg aaggcccact cacagactca ccgagtggac ctggggaccc 240 tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 420 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nngttctcac accgtccaga ggatgtatgg 540 ctgcgacgtg gggtcggact ggcgcttcct ccgcgggtac caccagtacg cctacgacgg 600 caaggattac atcgccctga aagaggacct gcgctcttgg accgcggcgg acatggcagc 660 tcagaccacc aagcacaagt gggaggcggc ccatgtggcg gagcagttga gagcctacct 720 ggagggcacg tgcgtggagt ggctccgcag atacctggag aacgggaagg agacgctgca 780 tgcagcgcac gg 792 // ID KX694129; SV 1; linear; genomic DNA; STD; HUM; 819 BP. XX AC KX694129; XX DT 29-SEP-2017 (Rel. 134, Created) DT 29-SEP-2017 (Rel. 134, Last updated, Version 1) XX DE Homo sapiens clone C_111544_00643 nonfunctional MHC class I antigen (HLA-C) DE gene, partial sequence. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-819 RA Cereb N., Yang S.Y.; RT "HLA new alleles found by Histogenetics"; RL Unpublished. XX RN [2] RP 1-819 RA Cereb N., Yang S.Y.; RT ; RL Submitted (08-AUG-2016) to the INSDC. RL Histogenetics, 300 Executive Blvd, Ossining, NY 10562, USA XX DR MD5; a908957dab1a31bf9ef36e1ce9662150. XX FH Key Location/Qualifiers FH FT source 1..819 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="C_111544_00643" FT /db_xref="taxon:9606" FT gene <1..>819 FT /gene="HLA-C" FT misc_feature <1..>819 FT /gene="HLA-C" FT /note="nonfunctional MHC class I antigen due to mutation" FT exon 1..301 FT /gene="HLA-C" FT /number=2 FT gap 302..543 FT /estimated_length=242 FT exon 544..819 FT /gene="HLA-C" FT /number=3 XX SQ Sequence 819 BP; 115 A; 179 C; 208 G; 75 T; 242 other; gctcccactc catgaggtat ttctacaccg ccgtgtcccg gcccggccgc ggagagcccc 60 gcttcatcgc agtgggctac gggagagccc cgcttcatcg cagtgggcta cgtggacgac 120 acgcagttcg tgcagttcga cagcgacgcc gcgagtccaa gaggggagcc gcgggcgccg 180 tgggtggagc aggaggggcc ggagtattgg gaccgggaga cacagaagta caagcgccag 240 gcacagactg accgagtgag cctgcggaac ctgcgcggct actacaacca gagcgaggcc 300 gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 420 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 540 nnnggtctca caccctccag aggatgtatg gctgcgacct ggggcccgac gggcgcctcc 600 tccgcgggta taaccagttc gcctacgacg gcaaggatta catcgccctg aatgaggacc 660 tgcgctcctg gaccgccgcg gacaaggcgg ctcagatcac ccagcgcaag tgggaggcgg 720 cccgtgaggc ggagcagcgg agagcctacc tggagggcac gtgcgtggag tggctccgca 780 gatacctgga gaacgggaag aagacgctgc agcgcgcgg 819 // ID KX694130; SV 1; linear; genomic DNA; STD; HUM; 269 BP. XX AC KX694130; XX DT 29-SEP-2017 (Rel. 134, Created) DT 29-SEP-2017 (Rel. 134, Last updated, Version 1) XX DE Homo sapiens clone DRB1_111545_00322 MHC class II antigen-like (HLA-DRB1) DE gene, partial sequence. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-269 RA Cereb N., Yang S.Y.; RT "HLA new alleles found by Histogenetics"; RL Unpublished. XX RN [2] RP 1-269 RA Cereb N., Yang S.Y.; RT ; RL Submitted (08-AUG-2016) to the INSDC. RL Histogenetics, 300 Executive Blvd, Ossining, NY 10562, USA XX DR MD5; 863d129803c15b7ae76d077d059377fd. XX FH Key Location/Qualifiers FH FT source 1..269 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="DRB1_111545_00322" FT /db_xref="taxon:9606" FT gene <1..>269 FT /gene="HLA-DRB1" FT exon 1..269 FT /gene="HLA-DRB1" FT /number=2 FT misc_feature <1..>269 FT /gene="HLA-DRB1" FT /note="similar to MHC class II antigen" XX SQ Sequence 269 BP; 58 A; 62 C; 100 G; 49 T; 0 other; cacgtttcct gtggcagggt aagtataagt gtcatttctt caacgggacg gagcgggtgc 60 agttcctgga aagactcttc tataaccagg aggagttcgt gcgcttcgac agcgacgtgg 120 gggagtaccg ggcggtgacg gagctagggc ggcctgtcgc gagtcctgga acagccagaa 180 ggacatcctg gaggacaggc ggggccaggt ggacaccgtg tgcagacaca actacggggt 240 tggtgagagc ttcacagtgc agcggcgag 269 // ID KX694131; SV 1; linear; genomic DNA; STD; HUM; 261 BP. XX AC KX694131; XX DT 29-SEP-2017 (Rel. 134, Created) DT 29-SEP-2017 (Rel. 134, Last updated, Version 1) XX DE Homo sapiens clone DPB1_111546_00569 MHC class II antigen (HLA-DPB1) gene, DE exon 2 and partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-261 RA Cereb N., Yang S.Y.; RT "HLA new alleles found by Histogenetics"; RL Unpublished. XX RN [2] RP 1-261 RA Cereb N., Yang S.Y.; RT ; RL Submitted (08-AUG-2016) to the INSDC. RL Histogenetics, 300 Executive Blvd, Ossining, NY 10562, USA XX DR MD5; a77f81e05d105bc742d173e228fc3930. XX FH Key Location/Qualifiers FH FT source 1..261 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="DPB1_111546_00569" FT /db_xref="taxon:9606" FT gene <1..>261 FT /gene="HLA-DPB1" FT mRNA <1..>261 FT /gene="HLA-DPB1" FT /product="MHC class II antigen" FT CDS <1..>261 FT /codon_start=3 FT /gene="HLA-DPB1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A288QAC9" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR014745" FT /db_xref="UniProtKB/TrEMBL:A0A288QAC9" FT /protein_id="AOW42511.1" FT /translation="NYLFQGRQECYAFNGTQRFLERYIYNREELVRFDSDVGEFRAVTE FT LGRPEAEYWNSQDILEEKRAVPDRMCRHNYELDEAVTLQRR" FT exon 1..261 FT /gene="HLA-DPB1" FT /number=2 XX SQ Sequence 261 BP; 60 A; 65 C; 97 G; 39 T; 0 other; agaattacct tttccaggga cggcaggaat gctacgcgtt taatgggaca cagcgcttcc 60 tggagagata catctacaac cgggaggagc tcgtgcgctt cgacagcgac gtgggggagt 120 tccgggcggt gacggagctg gggcggcctg aggcggagta ctggaacagc caggacatcc 180 tggaggagaa gcgggcagtg ccggacagga tgtgcagaca caactacgag ctggacgagg 240 ccgtgaccct gcagcgccga g 261 // ID KX697454; SV 1; linear; genomic DNA; STD; HUM; 359 BP. XX AC KX697454; XX DT 23-SEP-2016 (Rel. 130, Created) DT 23-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens isolate ND20 cytochrome B gene, partial cds; mitochondrial. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-359 RX PUBMED; 27706167. RA Auty H.K., Cleaveland S., Malele I., Masoy J., Lembo T., Bessell P., RA Torr S., Welburn S., Picozzi K.; RT "Quantifying Heterogeneity in Host-Vector Contact: Tsetse (Glossina RT swynnertoni and G. pallidipes) Host Choice in Serengeti National Park, RT Tanzania"; RL PLoS One 11(10):e0161291-e0161291(2016). XX RN [2] RP 1-359 RA Auty H.K., Cleaveland S., Malele I., Masoy J., Lembo T., Bessell P., RA Torr S., Welburn S., Picozzi K.; RT ; RL Submitted (15-AUG-2016) to the INSDC. RL Epidemiology Research Unit, SRUC, An Lochran, Inverness IV2 5NA, UK XX DR MD5; 0fdece40312b2b0ea9f88aaa3c3de31d. XX FH Key Location/Qualifiers FH FT source 1..359 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="ND20" FT /mol_type="genomic DNA" FT /country="Tanzania" FT /isolation_source="Glossina swynnertoni (tsetse fly) blood FT meal" FT /collection_date="Sep-2006" FT /db_xref="taxon:9606" FT CDS <1..>359 FT /codon_start=1 FT /transl_table=2 FT /product="cytochrome b" FT /db_xref="GOA:A0A1C9KQ41" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="UniProtKB/TrEMBL:A0A1C9KQ41" FT /protein_id="AOQ02496.1" FT /translation="PSNISAWWNFGSLLGACLILQITTGLFLAMHYSPDASTAFSSIAH FT ITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYYGSFLYSETWNIGIILLLATMATA FT FMGYVLPWGQMSFWGA" XX SQ Sequence 359 BP; 90 A; 118 C; 58 G; 93 T; 0 other; ccatccaaca tctcagcatg atgaaacttc ggctcactcc ttggcgcctg cctgatcctc 60 caaatcacca caggactatt cctagccatg cactactcac cagacgcctc aaccgccttt 120 tcatcaatcg cccacatcac tcgagacgta aattatggct gaatcatccg ctaccttcac 180 gccaatggcg cctcaatatt ctttatctgc ctcttcctac acatcgggcg aggcctatat 240 tacggatcat ttctctactc agaaacctga aacatcggca ttatcctcct gcttgcaact 300 atagcaacag ccttcatagg ttatgtcctc ccgtgaggac aaatatcatt ctgaggggc 359 // ID KX697544; SV 1; linear; genomic DNA; STD; HUM; 359 BP. XX AC KX697544; XX DT 23-SEP-2016 (Rel. 130, Created) DT 23-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens isolate TS20 cytochrome B gene, partial cds; mitochondrial. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-359 RX PUBMED; 27706167. RA Auty H.K., Cleaveland S., Malele I., Masoy J., Lembo T., Bessell P., RA Torr S., Welburn S., Picozzi K.; RT "Quantifying Heterogeneity in Host-Vector Contact: Tsetse (Glossina RT swynnertoni and G. pallidipes) Host Choice in Serengeti National Park, RT Tanzania"; RL PLoS One 11(10):e0161291-e0161291(2016). XX RN [2] RP 1-359 RA Auty H.K., Cleaveland S., Malele I., Masoy J., Lembo T., Bessell P., RA Torr S., Welburn S., Picozzi K.; RT ; RL Submitted (15-AUG-2016) to the INSDC. RL Epidemiology Research Unit, SRUC, An Lochran, Inverness IV2 5NA, UK XX DR MD5; 8f31e5b980d1129e682e50cf1efdf74a. XX FH Key Location/Qualifiers FH FT source 1..359 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="TS20" FT /mol_type="genomic DNA" FT /country="Tanzania" FT /isolation_source="Glossina swynnertoni (tsetse fly) blood FT meal" FT /collection_date="Aug-2006" FT /db_xref="taxon:9606" FT CDS <1..>359 FT /codon_start=1 FT /transl_table=2 FT /product="cytochrome b" FT /db_xref="GOA:A0A1C9KQ41" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="UniProtKB/TrEMBL:A0A1C9KQ41" FT /protein_id="AOQ02586.1" FT /translation="PSNISAWWNFGSLLGACLILQITTGLFLAMHYSPDASTAFSSIAH FT ITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYYGSFLYSETWNIGIILLLATMATA FT FMGYVLPWGQMSFWGA" XX SQ Sequence 359 BP; 90 A; 119 C; 58 G; 92 T; 0 other; ccatccaaca tctcagcatg atgaaacttc ggctcactcc ttggcgcctg cctgatcctc 60 caaatcacca caggactatt cctagccatg cactactcac cagacgcctc aaccgccttt 120 tcatcaatcg cccacatcac tcgagacgta aattatggct gaatcatccg ctaccttcac 180 gccaatggcg cctcaatatt ctttatctgc ctcttcctac acatcgggcg aggcctatat 240 tacggatcat ttctctactc agaaacctga aacatcggca ttatcctcct gcttgcaact 300 atagcaacag ccttcatagg ctatgtcctc ccgtgaggac aaatatcatt ctgaggggc 359 // ID KX701859; SV 1; linear; genomic DNA; STD; HUM; 3173 BP. XX AC KX701859; XX DT 26-DEC-2016 (Rel. 131, Created) DT 26-DEC-2016 (Rel. 131, Last updated, Version 1) XX DE Homo sapiens isolate 111-14 MHC class I antigen (HLA-A) gene, HLA-A*02:09 DE allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3173 RA Ameen R.M.; RT "Establishment of Stem Cell and Cord Blood Registry in Kuwait"; RL Unpublished. XX RN [2] RP 1-3173 RA Ameen R.M.; RT ; RL Submitted (14-AUG-2016) to the INSDC. RL Medical Laboratory Science, Allied Health Science, Health Sciences Centre, RL Kuwait University, 102, Jabriya, Hawally 13110, Kuwait XX DR MD5; 1b85bb6ddc23dbdb32613a485a430644. DR IMGT/HLA; HLA-A*02:09:01:01; HLA00014. XX CC ##Assembly-Data-START## CC Assembly Method :: HLA Twin RUO v. 1.1.3 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3173 FT /organism="Homo sapiens" FT /isolate="111-14" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <79..>2995 FT /gene="HLA-A" FT /allele="HLA-A*02:09" FT mRNA join(<79..151,282..551,793..1068,1669..1944,2044..2160, FT 2599..2631,2774..2821,2991..>2995) FT /gene="HLA-A" FT /allele="HLA-A*02:09" FT /product="MHC class I antigen" FT CDS join(79..151,282..551,793..1068,1669..1944,2044..2160, FT 2599..2631,2774..2821,2991..2995) FT /codon_start=1 FT /gene="HLA-A" FT /allele="HLA-A*02:09" FT /product="MHC class I antigen" FT /db_xref="GOA:Q95J05" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q95J05" FT /protein_id="APO40922.1" FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGT FT LRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMA FT AQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPEGDGTFQKWAAVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRK FT GGSYSQAASSDSAQGSDVSLTACKV" XX SQ Sequence 3173 BP; 618 A; 907 C; 975 G; 673 T; 0 other; ccaatcagtg tcgtcgcggt cgcggttcta aagtccgcac gcacccaccg ggactcagat 60 tctccccaga cgccgaggat ggccgtcatg gcgccccgaa ccctcgtcct gctactctcg 120 ggggctctgg ccctgaccca gacctgggcg ggtgagtgcg gggtcgggag ggaaacggcc 180 tctgtgggga gaagcaacgg gcccgcctgg cgggggcgca ggacccggga agccgcgccg 240 ggaggagggt cgggcgggtc tcagccactc ctcgtcccca ggctctcact ccatgaggta 300 tttcttcaca tccgtgtccc ggcccggccg cggggagccc cgcttcatcg cagtgggcta 360 cgtggacgac acgcagttcg tgcggttcga cagcgacgcc gcgagccaga ggatggagcc 420 gcgggcgccg tggatagagc aggagggtcc ggagtattgg gacggggaga cacggaaagt 480 gaaggcccac tcacagactc accgagtgga cctggggacc ctgcgcggct actacaacca 540 gagcgaggcc ggtgagtgac cccggcccgg ggcgcaggtc acgacctctc atcccccacg 600 gacgggccag gtcgcccaca gtctccgggt ccgagatccg ccccgaagcc gcgggacccc 660 gagacccttg ccccgggaga ggcccaggcg cctttacccg gtttcatttt cagtttaggc 720 caaaaatccc cccaggttgg tcggggcggg gcggggctcg ggggaccggg ctgaccgcgg 780 ggtccgggcc aggttctcac accgtccaga ggatgtatgg ctgcgacgtg gggtcggact 840 ggcgcttcct ccgcgggtac caccagtacg cctacgacgg caaggattac atcgccctga 900 aagaggacct gcgctcttgg accgcggcgg acatggcagc tcagaccacc aagcacaagt 960 gggaggcggc ccatgtggcg gagcagttga gagcctacct ggagggcacg tgcgtggagt 1020 ggctccgcag atacctggag aacgggaagg agacgctgca gcgcacgggt accaggggcc 1080 acggggcgcc tccctgatcg cctgtagatc tcccgggctg gcctcccaca aggaggggag 1140 acaattggga ccaacactag aatatcgccc tccctctggt cctgagggag aggaatcctc 1200 ctgggtttcc agatcctgta ccagagagtg actctgaggt tccgccctgc tctctgacac 1260 aattaaggga taaaatctct gaaggaatga cgggaagacg atccctcgaa tactgatgag 1320 tggttccctt tgacacacac aggcagcagc cttgggcccg tgacttttcc tctcaggcct 1380 tgttctctgc ttcacactca atgtgtgtgg gggtctgagt ccagcacttc tgagtccttc 1440 agcctccact caggtcagga ccagaagtcg ctgttccctc ttcagggact agaattttcc 1500 acggaatagg agattatccc aggtgcctgt gtccaggctg gtgtctgggt tctgtgctcc 1560 cttccccatc ccaggtgtcc tgtccattct caagatagcc acatgtgtgc tggaggagtg 1620 tcccatgaca gatgcaaaat gcctgaatga tctgactctt cctgacagac gcccccaaaa 1680 cgcatatgac tcaccacgct gtctctgacc atgaagccac cctgaggtgc tgggccctga 1740 gcttctaccc tgcggagatc acactgacct ggcagcggga tggggaggac cagacccagg 1800 acacggagct cgtggagacc aggcctgaag gggatggaac cttccagaag tgggcggctg 1860 tggtggtgcc ttctggacag gagcagagat acacctgcca tgtgcagcat gagggtttgc 1920 ccaagcccct caccctgaga tggggtaagg agggagacgg gggtgtcatg tcttttaggg 1980 aaagcaggag cctctctgac ctttagcagg gtcagggccc ctcaccttcc cctcttttcc 2040 cagagccgtc ttcccagccc accatcccca tcgtgggcat cattgctggc ctggttctct 2100 ttggagctgt gatcactgga gctgtggtcg ctgctgtgat gtggaggagg aagagctcag 2160 gtggggaagg ggtgaagggt gggtctgaga tttcttgtct cactgagggt tccaagaccc 2220 aggtagaagt gtgccctgcc tcgttactgg gaagcaccac ccacaattat gggcctaccc 2280 agcctgggcc ctgtgtgcca gcacttactc ttttgtaaag cacctgttaa aatgaaggac 2340 agatttatca ccttgattac agcggtgatg ggacctgatc ccagcagtca caagtcacag 2400 gggaaggtcc ctgaggacct tcaggagggc ggttggtcca ggacccacac ctgctttctt 2460 catgtttcct gatcccgccc tgggtctgca gtcacacatt tctggaaact tctctgaggt 2520 ccaagacttg gaggttcctc taggacctta aggccctgac tcctttctgg tatctcacag 2580 gacattttct tcccacagat agaaaaggag ggagctactc tcaggctgca agtaagtatg 2640 aaggaggctg atgcctgagg tccttgggat attgtgtttg ggagcccatg ggggagctca 2700 cccaccccac aattcctcct ctagccacat cttctgtggg atctgaccag gttctgtttt 2760 tgttctaccc caggcagtga cagtgcccag ggctctgatg tgtctctcac agcttgtaaa 2820 ggtgagagcc tggagggcct gatgtgtgtt gggtgttggg cggaacagtg gacacagctg 2880 tgctatgggg tttctttcca ttggatgtat tgagcatgcg atgggctgtt taaagtgtga 2940 cccctcactg tgacagatac gaatttgttc atgaatattt ttttctatag tgtgagacag 3000 ctgccttgtg tgggactgag aggcaagagt tgttcctgcc cttccctttg tgacttgaag 3060 aaccctgact ttgtttctgc aaaggcacct gcatgtgtct gtgttcgtgt aggcataatg 3120 tgaggaggtg gggagaccac cccaccccca tgtccaccat gaccctcttc cca 3173 // ID KX702182; SV 1; circular; genomic DNA; STD; HUM; 16570 BP. XX AC KX702182; XX DT 24-AUG-2016 (Rel. 129, Created) DT 24-AUG-2016 (Rel. 129, Last updated, Version 1) XX DE Homo sapiens haplogroup H mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16570 RA Greenspan B.; RT ; RL Submitted (12-AUG-2016) to the INSDC. RL Family Tree DNA - Genealogy by Genetics, Ltd., 1445 North Loop West, Suite RL 820, Houston, TX 77008, USA XX DR MD5; 1740682b5997f0fd72d679c596552f19. DR Ensembl-Gn; ENSG00000198695; homo_sapiens. DR Ensembl-Gn; ENSG00000198712; homo_sapiens. DR Ensembl-Gn; ENSG00000198763; homo_sapiens. DR Ensembl-Gn; ENSG00000198786; homo_sapiens. DR Ensembl-Gn; ENSG00000198804; homo_sapiens. DR Ensembl-Gn; ENSG00000198840; homo_sapiens. DR Ensembl-Gn; ENSG00000198886; homo_sapiens. DR Ensembl-Gn; ENSG00000198888; homo_sapiens. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Gn; ENSG00000228253; homo_sapiens. DR Ensembl-Tr; ENST00000361227; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000361381; homo_sapiens. DR Ensembl-Tr; ENST00000361390; homo_sapiens. DR Ensembl-Tr; ENST00000361453; homo_sapiens. DR Ensembl-Tr; ENST00000361567; homo_sapiens. DR Ensembl-Tr; ENST00000361624; homo_sapiens. DR Ensembl-Tr; ENST00000361681; homo_sapiens. DR Ensembl-Tr; ENST00000361739; homo_sapiens. DR Ensembl-Tr; ENST00000361851; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX FH Key Location/Qualifiers FH FT source 1..16570 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="FTDNA N43220" FT /mol_type="genomic DNA" FT /note="ethnicity:Armenian; origin_locality:Turkey: Erzerum" FT /db_xref="taxon:9606" FT /haplogroup="H" FT D-loop complement(join(16029..16570,1..579)) FT tRNA 579..649 FT /product="tRNA-Phe" FT rRNA 650..1603 FT /product="12S ribosomal RNA" FT tRNA 1604..1672 FT /product="tRNA-Val" FT rRNA 1673..3230 FT /product="16S ribosomal RNA" FT tRNA 3231..3305 FT /product="tRNA-Leu" FT /note="codons recognized: UUR" FT gene 3308..4263 FT /gene="ND1" FT CDS 3308..4263 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4262..4263,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:U5Z754" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:U5Z754" FT /protein_id="AOD41834.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPITISSIPPQT" FT tRNA 4264..4332 FT /product="tRNA-Ile" FT tRNA complement(4330..4401) FT /product="tRNA-Gln" FT tRNA 4403..4470 FT /product="tRNA-Met" FT gene 4471..5512 FT /gene="ND2" FT CDS 4471..5512 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5512,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXY9" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q7GXY9" FT /protein_id="AOD41835.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPFLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5513..5580 FT /product="tRNA-Trp" FT tRNA complement(5588..5656) FT /product="tRNA-Ala" FT tRNA complement(5658..5730) FT /product="tRNA-Asn" FT tRNA complement(5762..5827) FT /product="tRNA-Cys" FT tRNA complement(5827..5892) FT /product="tRNA-Tyr" FT gene 5905..7446 FT /gene="COX1" FT CDS 5905..7446 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:U5YWV7" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:U5YWV7" FT /protein_id="AOD41836.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7446..7517) FT /product="tRNA-Ser" FT /note="codons recognized: UCN" FT tRNA 7519..7586 FT /product="tRNA-Asp" FT gene 7587..8270 FT /gene="COX2" FT CDS 7587..8270 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /db_xref="GOA:U5Z487" FT /db_xref="InterPro:IPR001505" FT /db_xref="InterPro:IPR002429" FT /db_xref="InterPro:IPR008972" FT /db_xref="InterPro:IPR011759" FT /db_xref="InterPro:IPR014222" FT /db_xref="InterPro:IPR034210" FT /db_xref="InterPro:IPR036257" FT /db_xref="UniProtKB/TrEMBL:U5Z487" FT /protein_id="AOD41837.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8296..8365 FT /product="tRNA-Lys" FT gene 8367..8573 FT /gene="ATP8" FT CDS 8367..8573 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /db_xref="GOA:U5YV54" FT /db_xref="InterPro:IPR001421" FT /db_xref="InterPro:IPR039017" FT /db_xref="UniProtKB/TrEMBL:U5YV54" FT /protein_id="AOD41838.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8528..9208 FT /gene="ATP6" FT CDS 8528..9208 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B1D3" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B1D3" FT /protein_id="AOD41839.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMTMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9208..9991 FT /gene="COX3" FT CDS 9208..9991 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9991,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AOD41840.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9992..10059 FT /product="tRNA-Gly" FT gene 10060..10405 FT /gene="ND3" FT CDS 10060..10405 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10405,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXZ5" FT /db_xref="InterPro:IPR000440" FT /db_xref="InterPro:IPR038430" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ5" FT /protein_id="AOD41841.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWTE" FT tRNA 10406..10470 FT /product="tRNA-Arg" FT gene 10471..10767 FT /gene="ND4L" FT CDS 10471..10767 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AOD41842.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10761..12138 FT /gene="ND4" FT CDS 10761..12138 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12138,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:H9EC08" FT /db_xref="InterPro:IPR000260" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="InterPro:IPR010227" FT /db_xref="UniProtKB/TrEMBL:H9EC08" FT /protein_id="AOD41843.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12139..12207 FT /product="tRNA-His" FT tRNA 12208..12266 FT /product="tRNA-Ser" FT /note="codons recognized: AGY" FT tRNA 12267..12337 FT /product="tRNA-Leu" FT /note="codons recognized: CUN" FT gene 12338..14149 FT /gene="ND5" FT CDS 12338..14149 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:U5ZC31" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:U5ZC31" FT /protein_id="AOD41844.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPASPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14150..14674) FT /gene="ND6" FT CDS complement(14150..14674) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /db_xref="GOA:U5Z977" FT /db_xref="InterPro:IPR001457" FT /db_xref="UniProtKB/TrEMBL:U5Z977" FT /protein_id="AOD41845.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14675..14743) FT /product="tRNA-Glu" FT gene 14748..15888 FT /gene="CYTB" FT CDS 14748..15888 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15888,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q6VLV1" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q6VLV1" FT /protein_id="AOD41846.1" FT /translation="MTPMRKTNPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15889..15954 FT /product="tRNA-Thr" FT tRNA complement(15956..16024) FT /product="tRNA-Pro" XX SQ Sequence 16570 BP; 5116 A; 5183 C; 2177 G; 4094 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtatgcacgc gatagcattg cgagacgctg gagccggagc gccctatgtc 120 gcagtatctg tctttgattc ctacctcatc ctattattta tcgcacctac gttcaatatt 180 acaggcgaac atacttacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattgaat gtctgcacag ccgctttcca cacagacatc ataacaaaaa atttccacca 300 aacccccccc tccccccgct tctggccaca gcacttaaac acatctctgc caaaccccaa 360 aaacaaagaa ccctaacacc agcctaacca gatttcaaat tttatctttt ggcggtatgc 420 acttttaaca gtcacccccc aactaacaca ttattttccc ctcccactcc catactacta 480 atctcatcaa tacaaccccc gcccatccta cccagcacac acacaccgct gctaacccca 540 taccccgaac caaccaaacc ccaaagacac cccccacagt ttatgtagct tacctcctca 600 aagcaataca ctgaaaatgt ttagacgggc tcacatcacc ccataaacaa ataggtttgg 660 tcctagcctt tctattagct cttagtaaga ttacacatgc aagcatcccc gttccagtga 720 gttcaccctc taaatcacca cgatcaaaag ggacaagcat caagcacgca gcaatgcagc 780 tcaaaacgct tagcctagcc acacccccac gggaaacagc agtgattaac ctttagcaat 840 aaacgaaagt ttaactaagc tatactaact ccagggttgg tcaatttcgt gccagccacc 900 gcggtcacac gattaaccca agtcaataga agccggcgta aagagtgttt tagatcaccc 960 cctccccaat aaagctaaaa ctcacctgag ttgtaaaaaa ctccagttga cacaaaatag 1020 actacgaaag tggctttaac atatctgaac acacaatagc taagacccaa actgggatta 1080 gataccccac tatgcttagc cctaaacctc aacagttaaa tcaacaaaac tgctcgccag 1140 aacactacga gccacagctt aaaactcaaa ggacctggcg gtgcttcata tccctctaga 1200 ggagcctgtt ctgtaatcga taaaccccga tcaacctcac cacctcttgc tcagcctata 1260 taccgccatc ttcagcaaac cctgatgaag gctacaaagt aagcgcaagt acccacgtaa 1320 agacgttagg tcaaggtgta gcccatgagg tggcaagaaa tgggctacat tttctacccc 1380 agaaaactac gatagccctt atgaaactta agggtcgaag gtggatttag cagtaaactg 1440 agagtagagt gcttagttga acagggccct gaagcgcgta cacaccgccc gtcaccctcc 1500 tcaagtatac ttcaaaggac atttaactaa aacccctacg catttatata gaggagacaa 1560 gtcgtaacat ggtaagtgta ctggaaagtg cacttggacg aaccagagtg tagcttaaca 1620 caaagcaccc aacttacact taggagattt caacttaact tgaccgctct gagctaaacc 1680 tagccccaaa cccactccac cttactacca gacaacctta gccaaaccat ttacccaaat 1740 aaagtatagg cgatagaaat tgaaacctgg cgcaatagat atagtaccgc aagggaaaga 1800 tgaaaaatta taaccaagca taatatagca aggactaacc cctatacctt ctgcataatg 1860 aattaactag aaataacttt gcaaggagag ccaaagctaa gacccccgaa accagacgag 1920 ctacctaaga acagctaaaa gagcacaccc gtctatgtag caaaatagtg ggaagattta 1980 taggtagagg cgacaaacct accgagcctg gtgatagctg gttgtccaag atagaatctt 2040 agttcaactt taaatttgcc cacagaaccc tctaaatccc cttgtaaatt taactgttag 2100 tccaaagagg aacagctctt tggacactag gaaaaaacct tgtagagaga gtaaaaaatt 2160 taacacccat agtaggccta aaagcagcca ccaattaaga aagcgttcaa gctcaacacc 2220 cactacctaa aaaatcccaa acatataact gaactcctca cacccaattg gaccaatcta 2280 tcaccctata gaagaactaa tgttagtata agtaacatga aaacattctc ctccgcataa 2340 gcctgcgtca gattaaaaca ctgaactgac aattaacagc ccaatatcta caatcaacca 2400 acaagtcatt attaccctca ctgtcaaccc aacacaggca tgctcataag gaaaggttaa 2460 aaaaagtaaa aggaactcgg caaatcttac cccgcctgtt taccaaaaac atcacctcta 2520 gcatcaccag tattagaggc accgcctgcc cagtgacaca tgtttaacgg ccgcggtacc 2580 ctaaccgtgc aaaggtagca taatcacttg ttccttaaat agggacctgt atgaatggct 2640 ccacgagggt tcagctgtct cttactttta accagtgaaa ttgacctgcc cgtgaagagg 2700 cgggcataac acagcaagac gagaagaccc tatggagctt taatttatta atgcaaacag 2760 tacctaacaa acccacaggt cctaaactac caaacctgca ttaaaaattt cggttggggc 2820 gacctcggag cagaacccaa cctccgagca gtacatgcta agacttcacc agtcaaagcg 2880 aactactata ctcaattgat ccaataactt gaccaacgga acaagttacc ctagggataa 2940 cagcgcaatc ctattctaga gtccatatca acaatagggt ttacgacctc gatgttggat 3000 caggacatcc cgatggtgca gccgctatta aaggttcgtt tgttcaacga ttaaagtcct 3060 acgtgatctg agttcagacc ggagtaatcc aggtcggttt ctatctactt caaattcctc 3120 cctgtacgaa aggacaagag aaataaggcc tacttcacaa agcgccttcc cccgtaaatg 3180 atatcatctc aacttagtat tatacccaca cccacccaag aacagggttt gttaagatgg 3240 cagagcccgg taatcgcata aaacttaaaa ctttacagtc agaggttcaa ttcctcttct 3300 taacaacata cccatggcca acctcctact cctcattgta cccattctaa tcgcaatggc 3360 attcctaatg cttaccgaac gaaaaattct aggctatata caactacgca aaggccccaa 3420 cgttgtaggc ccctacgggc tactacaacc cttcgctgac gccataaaac tcttcaccaa 3480 agagccccta aaacccgcca catctaccat caccctctac atcaccgccc cgaccttagc 3540 tctcaccatc gctcttctac tatgaacccc cctccccata cccaaccccc tggtcaacct 3600 caacctaggc ctcctattta ttctagccac ctctagccta gccgtttact caatcctctg 3660 atcagggtga gcatcaaact caaactacgc cctgatcggc gcactgcgag cagtagccca 3720 aacaatctca tatgaagtca ccctagccat cattctacta tcaacattac taataagtgg 3780 ctcctttaac ctctccaccc ttatcacaac acaagaacac ctctgattac tcctgccatc 3840 atgacccttg gccataatat gatttatctc cacactagca gagaccaacc gaaccccctt 3900 cgaccttgcc gaaggggagt ccgaactagt ctcaggcttc aacatcgaat acgccgcagg 3960 ccccttcgcc ctattcttca tagccgaata cacaaacatt attataataa acaccctcac 4020 cactacaatc ttcctaggaa caacatatga cgcactctcc cctgaactct acacaacata 4080 ttttgtcacc aagaccctac ttctaacctc cctgttctta tgaattcgaa cagcataccc 4140 ccgattccgc tacgaccaac tcatacacct cctatgaaaa aacttcctac cactcaccct 4200 agcattactt atatgatatg tctccatacc cattacaatc tccagcattc cccctcaaac 4260 ctaagaaata tgtctgataa aagagttact ttgatagagt aaataatagg agcttaaacc 4320 cccttatttc taggactatg agaatcgaac ccatccctga gaatccaaaa ttctccgtgc 4380 cacctatcac accccatcct aaagtaaggt cagctaaata agctatcggg cccatacccc 4440 gaaaatgttg gttataccct tcccgtacta attaatcccc tggcccaacc cgtcatctac 4500 tctaccatct ttgcaggcac actcatcaca gcgctaagct cgcactgatt ttttacctga 4560 gtaggcctag aaataaacat gctagctttt attccagttc taaccaaaaa aataaaccct 4620 cgttccacag aagctgccat caagtatttc ctcacgcaag caaccgcatc cataatcctt 4680 ctaatagcta tcctcttcaa caatatactc tccggacaat gaaccataac caatactacc 4740 aatcaatact catcattaat aatcataatg gctatagcaa taaaactagg aatagccccc 4800 tttcacttct gagtcccaga ggttacccaa ggcacccctc tgacatccgg cctgcttctt 4860 ctcacatgac aaaaactagc ccccatctca atcatatacc aaatctctcc ctcactaaac 4920 gtaagccttc tcctcactct ctcaatctta tccatcatag caggcagttg aggtggatta 4980 aaccaaaccc agctacgcaa aatcttagca tactcctcaa ttacccacat aggatgaata 5040 atagcagttc taccgtacaa ccctaacata accattctta atttaactat ttatattatc 5100 ctaactacta ccgcattcct actactcaac ttaaactcca gcaccacgac cctactacta 5160 tctcgcacct gaaacaagct aacatgacta acacccttaa ttccatccac cctcctctcc 5220 ctaggaggcc tgcccccgct aaccggcttt ttgcccaaat gggccattat cgaagaattc 5280 acaaaaaaca atagcctcat catccccacc atcatagcca ccatcaccct ccttaacctc 5340 tacttctacc tacgcctaat ctactccacc tcaatcacac tactccccat atctaacaac 5400 gtaaaaataa aatgacagtt tgaacataca aaacccaccc cattcctccc cacactcatc 5460 gcccttacca cgctactcct acctatctcc ccttttatac taataatctt atagaaattt 5520 aggttaaata cagaccaaga gccttcaaag ccctcagtaa gttgcaatac ttaatttctg 5580 taacagctaa ggactgcaaa accccactct gcatcaactg aacgcaaatc agccacttta 5640 attaagctaa gcccttacta gaccaatggg acttaaaccc acaaacactt agttaacagc 5700 taagcaccct aatcaactgg cttcaatcta cttctcccgc cgccgggaaa aaaggcggga 5760 gaagccccgg caggtttgaa gctgcttctt cgaatttgca attcaatatg aaaatcacct 5820 cggagctggt aaaaagaggc ctaacccctg tctttagatt tacagtccaa tgcttcactc 5880 agccatttta cctcaccccc actgatgttc gccgaccgtt gactattctc tacaaaccac 5940 aaagacattg gaacactata cctattattc ggcgcatgag ctggagtcct aggcacagct 6000 ctaagcctcc ttattcgagc cgagctgggc cagccaggca accttctagg taacgaccac 6060 atctacaacg ttatcgtcac agcccatgca tttgtaataa tcttcttcat agtaataccc 6120 atcataatcg gaggctttgg caactgacta gttcccctaa taatcggtgc ccccgatatg 6180 gcgtttcccc gcataaacaa cataagcttc tgactcttac ctccctctct cctactcctg 6240 ctcgcatctg ctatagtgga ggccggagca ggaacaggtt gaacagtcta ccctccctta 6300 gcagggaact actcccaccc tggagcctcc gtagacctaa ccatcttctc cttacaccta 6360 gcaggtgtct cctctatctt aggggccatc aatttcatca caacaattat caatataaaa 6420 ccccctgcca taacccaata ccaaacgccc ctcttcgtct gatccgtcct aatcacagca 6480 gtcctacttc tcctatctct cccagtccta gctgctggca tcactatact actaacagac 6540 cgcaacctca acaccacctt cttcgacccc gccggaggag gagaccccat tctataccaa 6600 cacctattct gatttttcgg tcaccctgaa gtttatattc ttatcctacc aggcttcgga 6660 ataatctccc atattgtaac ttactactcc ggaaaaaaag aaccatttgg atacataggt 6720 atggtctgag ctatgatatc aattggcttc ctagggttta tcgtgtgagc acaccatata 6780 tttacagtag gaatagacgt agacacacga gcatatttca cctccgctac cataatcatc 6840 gctatcccca ccggcgtcaa agtatttagc tgactcgcca cactccacgg aagcaatatg 6900 aaatggtctg ctgcagtgct ctgagcccta ggattcatct ttcttttcac cgtaggtggc 6960 ctgactggca ttgtattagc aaactcatca ctagacatcg tactacacga cacgtactac 7020 gttgtagccc acttccacta tgtcctatca ataggagctg tatttgccat cataggaggc 7080 ttcattcact gatttcccct attctcaggc tacaccctag accaaaccta cgccaaaatc 7140 catttcacta tcatattcat cggcgtaaat ctaactttct tcccacaaca ctttctcggc 7200 ctatccggaa tgccccgacg ttactcggac taccccgatg catacaccac atgaaacatc 7260 ctatcatctg taggctcatt catttctcta acagcagtaa tattaataat tttcatgatt 7320 tgagaagcct tcgcttcgaa gcgaaaagtc ctaatagtag aagaaccctc cataaacctg 7380 gagtgactat atggatgccc cccaccctac cacacattcg aagaacccgt atacataaaa 7440 tctagacaaa aaaggaagga atcgaacccc ccaaagctgg tttcaagcca accccatggc 7500 ctccatgact ttttcaaaaa ggtattagaa aaaccatttc ataactttgt caaagttaaa 7560 ttataggcta aatcctatat atcttaatgg cacatgcagc gcaagtaggt ctacaagacg 7620 ctacttcccc tatcatagaa gagcttatca cctttcatga tcacgccctc ataatcattt 7680 tccttatctg cttcctagtc ctgtatgccc ttttcctaac actcacaaca aaactaacta 7740 atactaacat ctcagacgct caggaaatag aaaccgtctg aactatcctg cccgccatca 7800 tcctagtcct catcgccctc ccatccctac gcatccttta cataacagac gaggtcaacg 7860 atccctccct taccatcaaa tcaattggcc accaatggta ctgaacctac gagtacaccg 7920 actacggcgg actaatcttc aactcctaca tacttccccc attattccta gaaccaggcg 7980 acctgcgact ccttgacgtt gacaatcgag tagtactccc gattgaagcc cccattcgta 8040 taataattac atcacaagac gtcttgcact catgagctgt ccccacatta ggcttaaaaa 8100 cagatgcaat tcccggacgt ctaaaccaaa ccactttcac cgctacacga ccgggggtat 8160 actacggtca atgctctgaa atctgtggag caaaccacag tttcatgccc atcgtcctag 8220 aattaattcc cctaaaaatc tttgaaatag ggcccgtatt taccctatag caccccctct 8280 accccctcta gagcccactg taaagctaac ttagcattaa ccttttaagt taaagattaa 8340 gagaaccaac acctctttac agtgaaatgc cccaactaaa tactaccgta tggcccacca 8400 taattacccc catactcctt acactattcc tcatcaccca actaaaaata ttaaacacaa 8460 actaccacct acctccctca ccaaagccca taaaaataaa aaattataac aaaccctgag 8520 aaccaaaatg aacgaaaatc tgttcgcttc attcattgcc cccacaatcc taggcctacc 8580 cgccgcagta ctgatcattc tatttccccc tctattgatc cccacctcca aatatctcat 8640 caacaaccga ctaatcacca cccaacaatg actaatcaaa ctaacctcaa aacaaatgat 8700 aaccatacac aacactaaag gacgaacctg atctcttata ctagtatcct taatcatttt 8760 tattgccaca actaacctcc tcggactcct gcctcactca tttacaccaa ccacccaact 8820 atctataaac ctagccatgg ccatcccctt atgagcgggc gcagtgatta taggctttcg 8880 ctctaagatt aaaaatgccc tagcccactt cttaccacaa ggcacaccta caccccttat 8940 ccccatacta gttattatcg aaaccatcag cctactcatt caaccaatag ccctggccgt 9000 acgcctaacc gctaacatta ctgcaggcca cctactcatg cacctaattg gaagcgccac 9060 cctagcaata tcaaccatta accttccctc tacacttatc atcttcacaa ttctaattct 9120 actgactatc ctagaaatcg ctgtcgcctt aatccaagcc tacgttttca cacttctagt 9180 aagcctctac ctgcacgaca acacataatg acccaccaat cacatgccta tcatatagta 9240 aaacccagcc catgacccct aacaggggcc ctctcagccc tcctaatgac ctccggccta 9300 gccatgtgat ttcacttcca ctccataacg ctcctcatac taggcctact aaccaacaca 9360 ctaaccatat accaatgatg gcgcgatgta acacgagaaa gcacatacca aggccaccac 9420 acaccacctg tccaaaaagg ccttcgatac gggataatcc tatttattac ctcagaagtt 9480 tttttcttcg caggattttt ctgagccttt taccactcca gcctagcccc taccccccaa 9540 ttaggagggc actggccccc aacaggcatc accccgctaa atcccctaga agtcccactc 9600 ctaaacacat ccgtattact cgcatcagga gtatcaatca cctgagctca ccatagtcta 9660 atagaaaaca accgaaacca aataattcaa gcactgctta ttacaatttt actgggtctc 9720 tattttaccc tcctacaagc ctcagagtac ttcgagtctc ccttcaccat ttccgacggc 9780 atctacggct caacattttt tgtagccaca ggcttccacg gacttcacgt cattattggc 9840 tcaactttcc tcactatctg cttcatccgc caactaatat ttcactttac atccaaacat 9900 cactttggct tcgaagccgc cgcctgatac tggcattttg tagatgtggt ttgactattt 9960 ctgtatgtct ccatctattg atgagggtct tactctttta gtataaatag taccgttaac 10020 ttccaattaa ctagttttga caacattcaa aaaagagtaa taaacttcgc cttaatttta 10080 ataatcaaca ccctcctagc cttactacta ataattatta cattttgact accacaactc 10140 aacggctaca tagaaaaatc caccccttac gagtgcggct tcgaccctat atcccccgcc 10200 cgcgtccctt tctccataaa attcttctta gtagctatta ccttcttatt atttgatcta 10260 gaaattgccc tccttttacc cctaccatga gccctacaaa caactaacct gccactaata 10320 gttatgtcat ccctcttatt aatcatcatc ctagccctaa gtctggccta tgagtgacta 10380 caaaaaggat tagactgaac cgaattggta tatagtttaa acaaaacgaa tgatttcgac 10440 tcattaaatt atgataatca tatttaccaa atgcccctca tttacataaa tattatacta 10500 gcatttacca tctcacttct aggaatacta gtatatcgct cacacctcat atcctcccta 10560 ctatgcctag aaggaataat actatcgctg ttcattatag ctactctcat aaccctcaac 10620 acccactccc tcttagccaa tattgtgcct attgccatac tagtctttgc cgcctgcgaa 10680 gcagcggtgg gcctagccct actagtctca atctccaaca catatggcct agactacgta 10740 cataacctaa acctactcca atgctaaaac taatcgtccc aacaattata ttactaccac 10800 tgacatgact ttccaaaaaa cacataattt gaatcaacac aaccacccac agcctaatta 10860 ttagcatcat ccctctacta ttttttaacc aaatcaacaa caacctattt agctgttccc 10920 caaccttttc ctccgacccc ctaacaaccc ccctcctaat actaactacc tgactcctac 10980 ccctcacaat catggcaagc caacgccact tatccagtga accactatca cgaaaaaaac 11040 tctacctctc tatactaatc tccctacaaa tctccttaat tataacattc acagccacag 11100 aactaatcat attttatatc ttcttcgaaa ccacacttat ccccaccttg gctatcatca 11160 cccgatgagg caaccagcca gaacgcctga acgcaggcac atacttccta ttctacaccc 11220 tagtaggctc ccttccccta ctcatcgcac taatttacac tcacaacacc ctaggctcac 11280 taaacattct actactcact ctcactgccc aagaactatc aaactcctga gccaacaact 11340 taatatgact agcttacaca atagctttta tagtaaagat acctctttac ggactccact 11400 tatgactccc taaagcccat gtcgaagccc ccatcgctgg gtcaatagta cttgccgcag 11460 tactcttaaa actaggcggc tatggtataa tacgcctcac actcattctc aaccccctga 11520 caaaacacat agcctacccc ttccttgtac tatccctatg aggcataatt ataacaagct 11580 ccatctgcct acgacaaaca gacctaaaat cgctcattgc atactcttca atcagccaca 11640 tagccctcgt agtaacagcc attctcatcc aaaccccctg aagcttcacc ggcgcagtca 11700 ttctcataat cgcccacggg cttacatcct cattactatt ctgcctagca aactcaaact 11760 acgaacgcac tcacagtcgc atcataatcc tctctcaagg acttcaaact ctactcccac 11820 taatagcttt ttgatgactt ctagcaagcc tcgctaacct cgccttaccc cccactatta 11880 acctactggg agaactctct gtgctagtaa ccacgttctc ctgatcaaat atcactctcc 11940 tacttacagg actcaacata ctagtcacag ccctatactc cctctacata tttaccacaa 12000 cacaatgggg ctcactcacc caccacatta acaacataaa accctcattc acacgagaaa 12060 acaccctcat gttcatacac ctatccccca ttctcctcct atccctcaac cccgacatca 12120 ttaccgggtt ttcctcttgt aaatatagtt taaccaaaac atcagattgt gaatctgaca 12180 acagaggctt acgacccctt atttaccgag aaagctcaca agaactgcta actcatgccc 12240 ccatgtctaa caacatggct ttctcaactt ttaaaggata acagctatcc attggtctta 12300 ggccccaaaa attttggtgc aactccaaat aaaagtaata accatgcaca ctactataac 12360 caccctaacc ctgacttccc taattccccc catccttacc accctcgtta accctaacaa 12420 aaaaaactca tacccccatt atgtaaaatc cattgtcgca tccaccttta ttatcagtct 12480 cttccccaca acaatattca tgtgcctaga ccaagaagtt attatctcga actgacactg 12540 agccacaacc caaacaaccc agctctccct aagcttcaaa ctagactact tctccataat 12600 attcatccct gtagcattgt tcgttacatg gtccatcata gaattctcac tgtgatatat 12660 aaactcagac ccaaacatta atcagttctt caaatatcta ctcatcttcc taattaccat 12720 actaatctta gttaccgcta acaacctatt ccaactgttc atcggctgag agggcgtagg 12780 aattatatcc ttcttgctca tcagttgatg atacgcccga gcagatgcca acacagcagc 12840 cattcaagca atcctataca accgtatcgg cgatatcggt ttcatcctcg ccttagcatg 12900 atttatccta cactccaact catgagaccc acaacaaata gcccttctaa acgctaatcc 12960 aagcctcacc ccactactag gcctcctcct agcagcagca ggcaaatcag cccaattagg 13020 tctccacccc tgactcccct cagccataga aggccccacc ccagtctcag ccctactcca 13080 ctcaagcact atagttgtag caggaatctt cttactcatc cgcttccacc ccctagcaga 13140 aaatagccca ctaatccaaa ctctaacact atgcttaggc gctatcacca ctctgttcgc 13200 agcagtctgc gcccttacac aaaatgacat caaaaaaatc gtagccttct ccacttcaag 13260 tcaactagga ctcataatag ttacaatcgg catcaaccaa ccacacctag cattcctgca 13320 catctgtacc cacgccttct tcaaagccat actatttatg tgctccgggt ccatcatcca 13380 caaccttaac aatgaacaag atattcgaaa aataggagga ctactcaaaa ccatacctct 13440 cacttcaacc tccctcacca ttggcagcct agcattagca ggaatacctt tcctcacagg 13500 tttctactcc aaagaccaca tcatcgaaac cgcaaacata tcatacacaa acgcctgagc 13560 cctatctatt actctcatcg ctacctccct gacaagcgcc tatagcactc gaataattct 13620 tctcacccta acaggtcaac ctcgcttccc cacccttact aacattaacg aaaataaccc 13680 caccctacta aaccccatta aacgcctggc agccggaagc ctattcgcag gatttctcat 13740 tactaacaac atttcccccg catccccctt ccaaacaaca atccccctct acctaaaact 13800 cacagccctc gctgtcactt tcctaggact tctaacagcc ctagacctca actacctaac 13860 caacaaactt aaaataaaat ccccactatg cacattttat ttctccaaca tactcggatt 13920 ctaccctagc atcacacacc gcacaatccc ctatctaggc cttcttacga gccaaaacct 13980 gcccctactc ctcctagacc taacctgact agaaaagcta ttacctaaaa caatttcaca 14040 gcaccaaatc tccacctcca tcatcacctc aacccaaaaa ggcataatta aactttactt 14100 cctctctttc ttcttcccac tcatcctaac cctactccta atcacataac ctattccccc 14160 gagcaatctc aattacaata tatacaccaa caaacaatgt tcaaccagta actactacta 14220 atcaacgccc ataatcatac aaagcccccg caccaatagg atcctcccga atcaaccctg 14280 acccctctcc ttcataaatt attcagcttc ctacactatt aaagtttacc acaaccacca 14340 ccccatcata ctctttcacc cacagcacca atcctacctc catcgctaac cccactaaaa 14400 cactcaccaa gacctcaacc cctgaccccc atgcctcagg atactcctca atagccatcg 14460 ctgtagtata tccaaagaca accatcattc cccctaaata aattaaaaaa actattaaac 14520 ccatataacc tcccccaaaa ttcagaataa taacacaccc gaccacaccg ctaacaatca 14580 atactaaacc cccataaata ggagaaggct tagaagaaaa ccccacaaac cccattacta 14640 aacccacact caacagaaac aaagcataca tcattattct cgcacggact acaaccacga 14700 ccaatgatat gaaaaaccat cgttgtattt caactacaag aacaccaatg accccaatac 14760 gcaaaactaa ccccctaata aaattaatta accactcatt catcgacctc cccaccccat 14820 ccaacatctc cgcatgatga aacttcggct cactccttgg cgcctgcctg atcctccaaa 14880 tcaccacagg actattccta gccatgcact actcaccaga cgcctcaacc gccttttcat 14940 caatcgccca catcactcga gacgtaaatt atggctgaat catccgctac cttcacgcca 15000 atggcgcctc aatattcttt atctgcctct tcctacacat cgggcgaggc ctatattacg 15060 gatcatttct ctactcagaa acctgaaaca tcggcattat cctcctgctt gcaactatag 15120 caacagcctt cataggctat gtcctcccgt gaggccaaat atcattctga ggggccacag 15180 taattacaaa cttactatcc gccatcccat acattgggac agacctagtt caatgaatct 15240 gaggaggcta ctcagtagac agtcccaccc tcacacgatt ctttaccttt cacttcatct 15300 tgcccttcat tattgcagcc ctagcagcac tccacctcct attcttgcac gaaacgggat 15360 caaacaaccc cctaggaatc acctcccatt ccgataaaat caccttccac ccttactaca 15420 caatcaaaga cgccctcggc ttacttctct tccttctctc cttaatgaca ttaacactat 15480 tctcaccaga cctcctaggc gacccagaca attataccct agccaacccc ttaaacaccc 15540 ctccccacat caagcccgaa tgatatttcc tattcgccta cacaattctc cgatccgtcc 15600 ctaacaaact aggaggcgtc cttgccctat tactatccat cctcatccta gcaataatcc 15660 ccatcctcca tatatccaaa caacaaagca taatatttcg cccactaagc caatcacttt 15720 attgactcct agccgcagac ctcctcattc taacctgaat cggaggacaa ccagtaagct 15780 acccttttac catcattgga caagtagcat ccgtactata cttcacaaca atcctaatcc 15840 taataccaac tatctcccta attgaaaaca aaatactcaa atgggcctgt ccttgtagta 15900 taaactaata caccagtctt gtaaaccgga gatgaaaacc tttttccaag gacaaatcag 15960 agaaaaagtc tttaactcca ccattagcac ccaaagctaa gattctaatt taaactattc 16020 tctgttcttt catggggaag cagatttggg taccacccaa gtattgactc acccatcaac 16080 aaccgctatg tatttcgtac attactgcca gccaccatga atattgtacg gtaccataaa 16140 tacttgacca cctgtagtac ataaaaaccc aatccacatc aaaaccccct ccccatgctt 16200 acaagcaagt acagcaatca accctcaact atcacacatc aactgcaact ccaaagccac 16260 ccctcaccca ctaggatacc aacaaaccta cccaccctta acagtacata gtacataaag 16320 ccatttaccg tacatagcac attacagtca aatcccttct cgtccccatg gatgaccccc 16380 ctcagatagg ggtcccttgg ccaccatcct ccgtgaaatc aatatcccgc acaagagtgc 16440 tactctcctc gctccgggcc cataacactt gggggtagct aaagtgaact gtatccgaca 16500 tctggttcct acttcagggc cataaagcct aaatagccca cacgttcccc ttaaataaga 16560 catcacgatg 16570 // ID KX702183; SV 1; circular; genomic DNA; STD; HUM; 16570 BP. XX AC KX702183; XX DT 24-AUG-2016 (Rel. 129, Created) DT 24-AUG-2016 (Rel. 129, Last updated, Version 1) XX DE Homo sapiens haplogroup H mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16570 RA Greenspan B.; RT ; RL Submitted (12-AUG-2016) to the INSDC. RL Family Tree DNA - Genealogy by Genetics, Ltd., 1445 North Loop West, Suite RL 820, Houston, TX 77008, USA XX DR MD5; 679da5ee1fc278ac87ca0e6577264125. DR Ensembl-Gn; ENSG00000198695; homo_sapiens. DR Ensembl-Gn; ENSG00000198712; homo_sapiens. DR Ensembl-Gn; ENSG00000198763; homo_sapiens. DR Ensembl-Gn; ENSG00000198804; homo_sapiens. DR Ensembl-Gn; ENSG00000198840; homo_sapiens. DR Ensembl-Gn; ENSG00000198886; homo_sapiens. DR Ensembl-Gn; ENSG00000198888; homo_sapiens. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Gn; ENSG00000228253; homo_sapiens. DR Ensembl-Tr; ENST00000361227; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000361381; homo_sapiens. DR Ensembl-Tr; ENST00000361390; homo_sapiens. DR Ensembl-Tr; ENST00000361453; homo_sapiens. DR Ensembl-Tr; ENST00000361624; homo_sapiens. DR Ensembl-Tr; ENST00000361681; homo_sapiens. DR Ensembl-Tr; ENST00000361739; homo_sapiens. DR Ensembl-Tr; ENST00000361851; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX FH Key Location/Qualifiers FH FT source 1..16570 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="FTDNA 176699" FT /mol_type="genomic DNA" FT /note="ethnicity:Armenian; origin_locality:Turkey: Mersin" FT /db_xref="taxon:9606" FT /haplogroup="H" FT D-loop complement(join(16029..16570,1..579)) FT tRNA 579..649 FT /product="tRNA-Phe" FT rRNA 650..1603 FT /product="12S ribosomal RNA" FT tRNA 1604..1672 FT /product="tRNA-Val" FT rRNA 1673..3230 FT /product="16S ribosomal RNA" FT tRNA 3231..3305 FT /product="tRNA-Leu" FT /note="codons recognized: UUR" FT gene 3308..4263 FT /gene="ND1" FT CDS 3308..4263 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4262..4263,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:U5Z754" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:U5Z754" FT /protein_id="AOD41821.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPITISSIPPQT" FT tRNA 4264..4332 FT /product="tRNA-Ile" FT tRNA complement(4330..4401) FT /product="tRNA-Gln" FT tRNA 4403..4470 FT /product="tRNA-Met" FT gene 4471..5512 FT /gene="ND2" FT CDS 4471..5512 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5512,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXY9" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q7GXY9" FT /protein_id="AOD41822.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPFLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5513..5580 FT /product="tRNA-Trp" FT tRNA complement(5588..5656) FT /product="tRNA-Ala" FT tRNA complement(5658..5730) FT /product="tRNA-Asn" FT tRNA complement(5762..5827) FT /product="tRNA-Cys" FT tRNA complement(5827..5892) FT /product="tRNA-Tyr" FT gene 5905..7446 FT /gene="COX1" FT CDS 5905..7446 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:U5YWV7" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:U5YWV7" FT /protein_id="AOD41823.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7446..7517) FT /product="tRNA-Ser" FT /note="codons recognized: UCN" FT tRNA 7519..7586 FT /product="tRNA-Asp" FT gene 7587..8270 FT /gene="COX2" FT CDS 7587..8270 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /db_xref="GOA:U5Z487" FT /db_xref="InterPro:IPR001505" FT /db_xref="InterPro:IPR002429" FT /db_xref="InterPro:IPR008972" FT /db_xref="InterPro:IPR011759" FT /db_xref="InterPro:IPR014222" FT /db_xref="InterPro:IPR034210" FT /db_xref="InterPro:IPR036257" FT /db_xref="UniProtKB/TrEMBL:U5Z487" FT /protein_id="AOD41824.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8296..8365 FT /product="tRNA-Lys" FT gene 8367..8573 FT /gene="ATP8" FT CDS 8367..8573 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /db_xref="GOA:U5YV54" FT /db_xref="InterPro:IPR001421" FT /db_xref="InterPro:IPR039017" FT /db_xref="UniProtKB/TrEMBL:U5YV54" FT /protein_id="AOD41825.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8528..9208 FT /gene="ATP6" FT CDS 8528..9208 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B1D3" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B1D3" FT /protein_id="AOD41826.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMTMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9208..9991 FT /gene="COX3" FT CDS 9208..9991 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9991,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AOD41827.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9992..10059 FT /product="tRNA-Gly" FT gene 10060..10405 FT /gene="ND3" FT CDS 10060..10405 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10405,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXZ5" FT /db_xref="InterPro:IPR000440" FT /db_xref="InterPro:IPR038430" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ5" FT /protein_id="AOD41828.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWTE" FT tRNA 10406..10470 FT /product="tRNA-Arg" FT gene 10471..10767 FT /gene="ND4L" FT CDS 10471..10767 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AOD41829.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10761..12138 FT /gene="ND4" FT CDS 10761..12138 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12138,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:H9EC08" FT /db_xref="InterPro:IPR000260" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="InterPro:IPR010227" FT /db_xref="UniProtKB/TrEMBL:H9EC08" FT /protein_id="AOD41830.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12139..12207 FT /product="tRNA-His" FT tRNA 12208..12266 FT /product="tRNA-Ser" FT /note="codons recognized: AGY" FT tRNA 12267..12337 FT /product="tRNA-Leu" FT /note="codons recognized: CUN" FT gene 12338..14149 FT /gene="ND5" FT CDS 12338..14149 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:Q7GXT4" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:Q7GXT4" FT /protein_id="AOD41831.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPTSPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14150..14674) FT /gene="ND6" FT CDS complement(14150..14674) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /db_xref="GOA:U5Z977" FT /db_xref="InterPro:IPR001457" FT /db_xref="UniProtKB/TrEMBL:U5Z977" FT /protein_id="AOD41832.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14675..14743) FT /product="tRNA-Glu" FT gene 14748..15888 FT /gene="CYTB" FT CDS 14748..15888 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15888,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q6VLV1" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q6VLV1" FT /protein_id="AOD41833.1" FT /translation="MTPMRKTNPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15889..15954 FT /product="tRNA-Thr" FT tRNA complement(15956..16024) FT /product="tRNA-Pro" XX SQ Sequence 16570 BP; 5118 A; 5182 C; 2176 G; 4093 T; 1 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtatgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgcctcatc ctattattta tcgcacctac gttcaatatt 180 acaggcgaac atacttacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattgaat gtctgcacag ccgctttcca cacagacatc ataacaaaaa atttccacca 300 aacccccccc tccccccgct tctggccaca gcacttaaac acatctctgc caaaccccaa 360 aaacaaagaa ccctaacacc agcctaacca gatttcaaat tttatctttt ggcggtatgc 420 acttttaaca gtcacccccc aactaacaca ttattttccc ctcccactcc catactacta 480 atctcatcaa tacaaccccc gcccatccta cccagcacac acacaccgct gctaacccca 540 taccccgaac caaccaaacc ccaaagacac cccccacagt ttatgtagct tacctcctca 600 aagcaataca ctgaaaatgt ttagacgggc tcacatcacc ccataaacaa ataggtttgg 660 tcctagcctt tctattagct cttagtaaga ttacacatgc aagcatcccc gttccagtga 720 gttcaccctc taaatcacca cgatcaaaag ggacaagcat caagcacgca gcaatgcagc 780 tcaaaacgct tagcctagcc acacccccac gggaaacagc agtgattaac ctttagcaat 840 aaacgaaagt ttaactaagc tatactaacc ccagggttgg tcaatttcgt gccagccacc 900 gcggtcacac gattaaccca agtcaataga agccggcgta aagagtgttt tagatcaccc 960 cctccccaat aaagctaaaa ctcacctgag ttgtaaaaaa ctccagttga cacaaaatag 1020 actacgaaag tggctttaac atatctgaac acacaatagc taagacccaa actgggatta 1080 gataccccac tatgcttagc cctaaacctc aacagttaaa tcaacaaaac tgctcgccag 1140 aacactacga gccacagctt aaaactcaaa ggacctggcg gtgcttcata tccctctaga 1200 ggagcctgtt ctgtaatcga taaaccccga tcaacctcac cacctcttgc tcagcctata 1260 taccgccatc ttcagcaaac cctgatgaag gctacaaagt aagcgcaagt acccacgtaa 1320 agacgttagg tcaaggtgta gcccatgagg tggcaagaaa tgggctacat tttctacccc 1380 agaaaactac gatagccctt atgaaactta agggtcgaag gtggatttag cagtaaactg 1440 agagtagagt gcttagttga acagggccct gaagcgcgta cacaccgccc gtcaccctcc 1500 tcaagtatac ttcaaaggac atttaactaa aacccctacg catttatata gaggagacaa 1560 gtcgtaacat ggtaagtgta ctggaaagtg cacttggacg aaccagagtg tagcttaaca 1620 caaagcaccc aacttacact taggagattt caacttaact tgaccgctct gagctaaacc 1680 tagccccaaa cccactccac cttactacca gacaacctta gccaaaccat ttacccaaat 1740 aaagtatagg cgatagaaat tgaaacctgg cgcaatagat atagtaccgc aagggaaaga 1800 tgaaaaatta taaccaagca taatatagca aggactaacc cctatacctt ctgcataatg 1860 aattaactag aaataacttt gcaaggagag ccaaagctaa gacccccgaa accagacgag 1920 ctacctaaga acagctaaaa gagcacaccc gtctatgtag caaaatagtg ggaagattta 1980 taggtagagg cgacaaacct accgagcctg gtgatagctg gttgtccaag atagaatctt 2040 agttcaactt taaatttgcc cacagaaccc tctaaatccc cttgtaaatt taactgttag 2100 tccaaagagg aacagctctt tggacactag gaaaaaacct tgtagagaga gtaaaaaatt 2160 taacacccat agtaggccta aaagcagcca ccaattaaga aagcgttcaa gctcaacacc 2220 cactacctaa aaaatcccaa acatataact gaactcctca cacccaattg gaccaatcta 2280 tcaccctata gaagaactaa tgttagtata agtaacatga aaacattctc ctccgcataa 2340 gcctgcgtca gattaaaaca ctgaactgac aattaacagc ccaatatcta caatcaacca 2400 acaagtcatt attaccctca ctgtcaaccc aacacaggca tgctcataag gaaaggttaa 2460 aaaaagtaaa aggaactcgg caaatcttac cccgcctgtt taccaaaaac atcacctcta 2520 gcatcaccag tattagaggc accgcctgcc cagtgacaca tgtttaacgg ccgcggtacc 2580 ctaaccgtgc aaaggtagca taatcacttg ttccttaaat agggacctgt atgaatggct 2640 ccacgagggt tcagctgtct cttactttta accagtgaaa ttgacctgcc cgtgaagagg 2700 cgggcataac acagcaagac gagaagaccc tatggagctt taatttatta atgcaaacag 2760 tacctaacaa acccacaggt cctaaactac caaacctgca ttaaaaattt cggttggggc 2820 gacctcggag cagaacccaa cctccgagca gtacatgcta agacttcacc agtcaaagcg 2880 aactactata ctcaattgat ccaataactt gaccaacgga acaagttacc ctagggataa 2940 cagcgcaatc ctattctaga gtccatatca acaatagggt ttacgacctc gatgttggat 3000 caggacatcc cgatggtgca gccgctatta aaggttcgtt tgttcaacga ttaaagtcct 3060 acgtgatctg agttcagacc ggagtaatcc aggtcggttt ctatctactt caaattcctc 3120 cctgtacgaa aggacaagag aaataaggcc tacttcacaa agcgccttcc cccgtaaatg 3180 atatcatctc aacttagtat tatacccaca cccacccaag aacagggttt gttaagatgg 3240 cagagcccgg taatcgcata aaacttaaaa ctttacagtc agaggttcaa ttcctcttct 3300 taacaacata cccatggcca acctcctact cctcattgta cccattctaa tcgcaatggc 3360 attcctaatg cttaccgaac gaaaaattct aggctatata caactacgca aaggccccaa 3420 cgttgtaggc ccctacgggc tactacaacc cttcgctgac gccataaaac tcttcaccaa 3480 agagccccta aaacccgcca catctaccat caccctctac atcaccgccc cgaccttagc 3540 tctcaccatc gctcttctac tatgaacccc cctccccata cccaaccccc tggtcaacct 3600 caacctaggc ctcctattta ttctagccac ctctagccta gccgtttact caatcctctg 3660 atcagggtga gcatcaaact caaactacgc cctgatcggc gcactgcgag cagtagccca 3720 aacaatctca tatgaagtca ccctagccat cattctacta tcaacattac taataagtgg 3780 ctcctttaac ctctccaccc ttatcacaac acaagaacac ctctgattac tcctgccatc 3840 atgacccttg gccataatat gatttatctc cacactagca gagaccaacc gaaccccctt 3900 cgaccttgcc gaaggggagt ccgaactagt ctcaggcttc aacatcgaat acgccgcagg 3960 ccccttcgcc ctattcttca tagccgaata cacaaacatt attataataa acaccctcac 4020 cactacaatc ttcctaggaa caacatatga cgcactctcc cctgaactct acacaacata 4080 ttttgtcacc aagaccctac ttctaacctc cctgttctta tgaattcgaa cagcataccc 4140 ccgattccgc tacgaccaac tcatacacct cctatgaaaa aacttcctac cactcaccct 4200 agcattactt atatgatatg tctccatacc cattacaatc tccagcattc cccctcaaac 4260 ctaagaaata tgtctgataa aagagttact ttgatagagt aaataatagg agcttaaacc 4320 cccttatttc taggactatg agaatcgaac ccatccctga gaatccaaaa ttctccgtgc 4380 cacctatcac accccatcct aaagtaaggt cagctaaata agctatcggg cccatacccc 4440 gaaaatgttg gttataccct tcccgtacta attaatcccc tggcccaacc cgtcatctac 4500 tctaccatct ttgcaggcac actcatcaca gcgctaagct cgcactgatt ttttacctga 4560 gtaggcctag aaataaacat gctagctttt attccagttc taaccaaaaa aataaaccct 4620 cgttccacag aagctgccat caagtatttc ctcacgcaag caaccgcatc cataatcctt 4680 ctaatagcta tcctcttcaa caatatactc tccggacaat gaaccataac caatactacc 4740 aatcaatact catcattaat aatcataatg gctatagcaa taaaactagg aatagccccc 4800 tttcacttct gagtcccaga ggttacccaa ggcacccctc tgacatccgg cctgcttctt 4860 ctcacatgac aaaaactagc ccccatctca atcatatacc aaatctctcc ctcactaaac 4920 gtaagccttc tcctcactct ctcaatctta tccatcatag caggcagttg aggtggatta 4980 aaccaaaccc agctacgcaa aatcttagca tactcctcaa ttacccacat aggatgaata 5040 atagcagttc taccgtacaa ccctaacata accattctta atttaactat ttatattatc 5100 ctaactacta ccgcattcct actactcaac ttaaactcca gcaccacgac cctactacta 5160 tctcgcacct gaaacaagct aacatgacta acacccttaa ttccatccac cctcctctcc 5220 ctaggaggcc tgcccccgct aaccggcttt ttgcccaaat gggccattat cgaagaattc 5280 acaaaaaaca atagcctcat catccccacc atcatagcca ccatcaccct ccttaacctc 5340 tacttctacc tacgcctaat ctactccacc tcaatcacac tactccccat atctaacaac 5400 gtaaaaataa aatgacagtt tgaacataca aaacccaccc cattcctccc cacactcatc 5460 gcccttacca cgctactcct acctatctcc ccttttatac taataatctt atagaaattt 5520 aggttaaata cagaccaaga gccttcaaag ccctcagtaa gttgcaatac ttaatttctg 5580 taacagctaa ggactgcaaa accccactct gcatcaactg aacgcaaatc agccacttta 5640 attaagctaa gcccttacta gaccaatggg acttaaaccc acaaacactt agttaacagc 5700 taagcaccct aatcaactgg cttcaatcta cttctcccgc cgccgggaaa aaaggcggga 5760 gaagccccgg caggtttgaa gctgcttctt cgaatttgca attcaatatg aaaatcacct 5820 cggagctggt aaaaagaggc ctaacccctg tctttagatt tacagtccaa tgcttcactc 5880 agccatttta cctcaccccc actgatgttc gccgaccgtt gactattctc tacaaaccac 5940 aaagacattg gaacactata cctattattc ggcgcatgag ctggagtcct aggcacagct 6000 ctaagcctcc ttattcgagc cgagctgggc cagccaggca accttctagg taacgaccac 6060 atctacaacg ttatcgtcac agcccatgca tttgtaataa tcttcttcat agtaataccc 6120 atcataatcg gaggctttgg caactgacta gttcccctaa taatcggtgc ccccgatatg 6180 gcgtttcccc gcataaacaa cataagcttc tgactcttac ctccctctct cctactcctg 6240 ctcgcatctg ctatagtgga ggccggagca ggaacaggtt gaacagtcta ccctccctta 6300 gcagggaact actcccaccc tggagcctcc gtagacctaa ccatcttctc cttacaccta 6360 gcaggtgtct cctctatctt aggggccatc aatttcatca caacaattat caatataaaa 6420 ccccctgcca taacccaata ccaaacgccc ctcttcgtct gatccgtcct aatcacagca 6480 gtcctacttc tcctatctct cccagtccta gctgctggca tcactatact actaacagac 6540 cgcaacctca acaccacctt cttcgacccc gccggaggag gagaccccat tctataccaa 6600 cacctattct gatttttcgg tcaccctgaa gtttatattc ttatcctacc aggcttcgga 6660 ataatctccc atattgtaac ttactactcc ggaaaaaaag aaccatttgg atacataggt 6720 atggtctgag ctatgatatc aattggcttc ctagggttta tcgtgtgagc acaccatata 6780 tttacagtag gaatagacgt agacacacga gcatatttca cctccgctac cataatcatc 6840 gctatcccca ccggcgtcaa agtatttagc tgactcgcca cactccacgg aagcaatatg 6900 aaatgatctg ctgcagtgct ctgagcccta ggattcatct ttcttttcac cgtaggtggc 6960 ctgactggca ttgtattagc aaactcatca ctagacatcg tactacacga cacgtactac 7020 gttgtagccc acttccacta tgtcctatca ataggagctg tatttgccat cataggaggc 7080 ttcattcact gatttcccct attctcaggc tacaccctag accaaaccta cgccaaaatc 7140 catttcacta tcatattcat cggcgtaaat ctaactttct tcccacaaca ctttctcggc 7200 ctatccggaa tgccccgacg ttactcggac taccccgatg catacaccac atgaaacatc 7260 ctatcatctg taggctcatt catttctcta acagcagtaa tattaataat tttcatgatt 7320 tgagaagcct tcgcttcgaa gcgaaaagtc ctaatagtag aagaaccctc cataaacctg 7380 gagtgactat atggatgccc cccaccctac cacacattcg aagaacccgt atacataaaa 7440 tctagacaaa aaaggaagga atcgaacccc ccaaagctgg tttcaagcca accccatggc 7500 ctccatgact ttttcaaaaa ggtattagaa aaaccatttc ataactttgt caaagttaaa 7560 ttataggcta aatcctatat atcttaatgg cacatgcagc gcaagtaggt ctacaagacg 7620 ctacttcccc tatcatagaa gagcttatca cctttcatga tcacgccctc ataatcattt 7680 tccttatctg cttcctagtc ctgtatgccc ttttcctaac actcacaaca aaactaacta 7740 atactaacat ctcagacgct caggaaatag aaaccgtctg aactatcctg cccgccatca 7800 tcctagtcct catcgccctc ccatccctac gcatccttta cataacagac gaggtcaacg 7860 atccctccct taccatcaaa tcaattggcc accaatggta ctgaacctac gagtacaccg 7920 actacggcgg actaatcttc aactcctaca tacttccccc attattccta gaaccaggcg 7980 acctgcgact ccttgacgtt gacaatcgag tagtactccc gattgaagcc cccattcgta 8040 taataattac atcacaagac gtcttgcact catgagctgt ccccacatta ggcttaaaaa 8100 cagatgcaat tcccggacgt ctaaaccaaa ccactttcac cgctacacga ccgggggtat 8160 actacggtca atgctctgaa atctgtggag caaaccacag tttcatgccc atcgtcctag 8220 aattaattcc cctaaaaatc tttgaaatag ggcccgtatt taccctatag caccccctct 8280 accccctcta gagcccactg taaagctaac ttagcattaa ccttttaagt taaagattaa 8340 gagaaccaac acctctttac agtgaaatgc cccaactaaa tactaccgta tggcccacca 8400 taattacccc catactcctt acactattcc tcatcaccca actaaaaata ttaaacacaa 8460 actaccacct acctccctca ccaaagccca taaaaataaa aaattataac aaaccctgag 8520 aaccaaaatg aacgaaaatc tgttcgcttc attcattgcc cccacaatcc taggcctacc 8580 cgccgcagta ctgatcattc tatttccccc tctattgatc cccacctcca aatatctcat 8640 caacaaccga ctaatcacca cccaacaatg actaatcaaa ctaacctcaa aacaaatgat 8700 aaccatacac aacactaaag gacgaacctg atctcttata ctagtatcct taatcatttt 8760 tattgccaca actaacctcc tcggactcct gcctcactca tttacaccaa ccacccaact 8820 atctataaac ctagccatgg ccatcccctt atgagcgggc gcagtgatta taggctttcg 8880 ctctaagatt aaaaatgccc tagcccactt cttaccacaa ggcacaccta caccccttat 8940 ccccatacta gttattatcg aaaccatcag cctactcatt caaccaatag ccctggccgt 9000 acgcctaacc gctaacatta ctgcaggcca cctactcatg cacctaattg gaagcgccac 9060 cctagcaata tcaaccatta accttccctc tacacttatc atcttcacaa ttctaattct 9120 actgactatc ctagaaatcg ctgtcgcctt aatccaagcc tacgttttca cacttctagt 9180 aagcctctac ctgcacgaca acacataatg acccaccaat cacatgccta tcatatagta 9240 aaacccagcc catgacccct aacaggggcc ctctcagccc tcctaatgac ctccggccta 9300 gccatgtgat ttcacttcca ctccataacg ctcctcatac taggcctact aaccaacaca 9360 ctaaccatat accaatgatg gcgcgatgta acacgagaaa gcacatacca aggccaccac 9420 acaccacctg tccaaaaagg ccttcgatac gggataatcc tatttattac ctcagaagtt 9480 tttttcttcg caggattttt ctgagccttt taccactcca gcctagcccc taccccccaa 9540 ttaggagggc actggccccc aacaggcatc accccgctaa atcccctaga agtcccactc 9600 ctaaacacat ccgtattact cgcatcagga gtatcaatca cctgagctca ccatagtcta 9660 atagaaaaca accgaaacca aataattcaa gcactgctta ttacaatttt actgggtctc 9720 tattttaccc tcctacaagc ctcagagtac ttcgagtctc ccttcaccat ttccgacggc 9780 atctacggct caacattttt tgtagccaca ggcttccacg gacttcacgt cattattggc 9840 tcaactttcc tcactatctg cttcatccgc caactaatat ttcactttac atccaaacat 9900 cactttggct tcgaagccgc cgcctgatac tggcattttg tagatgtggt ttgactattt 9960 ctgtatgtct ccatctattg atgagggtct tactctttta gtataaatag taccgttaac 10020 ttccaattaa ctagttttga caacattcaa aaaagagtaa taaacttcgc cttaatttta 10080 ataatcaaca ccctcctagc cttactacta ataattatta cattttgact accacaactc 10140 aacggctaca tagaaaaatc caccccttac gagtgcggct tcgaccctat atcccccgcc 10200 cgcgtccctt tctccataaa attcttctta gtagctatta ccttcttatt atttgatcta 10260 gaaattgccc tccttttacc cctaccatga gccctacaaa caactaacct gccactaata 10320 gttatgtcat ccctcttatt aatcatcatc ctagccctaa gtctggccta tgagtgacta 10380 caaaaaggat tagactgaac cgaattggta tatagtttaa acaaaacgaa tgatttcgac 10440 tcattaaatt atgataatca tatttaccaa atgcccctca tttacataaa tattatacta 10500 gcatttacca tctcacttct aggaatacta gtatatcgct cacacctcat atcctcccta 10560 ctatgcctag aaggaataat actatcgctg ttcattatag ctactctcat aaccctcaac 10620 acccactccc tcttagccaa tattgtgcct attgccatac tagtctttgc cgcctgcgaa 10680 gcagcggtgg gcctagccct actagtctca atctccaaca catatggcct agactacgta 10740 cataacctaa acctactcca atgctaaaac taatcgtccc aacaattata ttactaccac 10800 tgacatgact ttccaaaaaa cacataattt gaatcaacac aaccacccac agcctaatta 10860 ttagcatcat ccctctacta ttttttaacc aaatcaacaa caacctattt agctgttccc 10920 caaccttttc ctccgacccc ctaacaaccc ccctcctaat actaactacc tgactcctac 10980 ccctcacaat catggcaagc caacgccact tatccagtga accactatca cgaaaaaaac 11040 tctacctctc tatactaatc tccctacaaa tctccttaat tataacattc acagccacag 11100 aactaatcat attttatatc ttcttcgaaa ccacacttat ccccaccttg gctatcatca 11160 cccgatgagg caaccagcca gaacgcctga acgcaggcac atacttccta ttctacaccc 11220 tagtaggctc ccttccccta ctcatcgcac taatttacac tcacaacacc ctaggctcac 11280 taaacattct actactcact ctcactgccc aagaactatc aaactcctga gccaacaact 11340 taatatgact agcttacaca atagctttta tagtaaagat acctctttac ggactccact 11400 tatgactccc taaagcccat gtcgaagccc ccatcgctgg gtcaatagta cttgccgcag 11460 tactcttaaa actaggcggc tatggtataa tacgcctcac actcattctc aaccccctga 11520 caaaacacat agcctacccc ttccttgtac tatccctatg aggcataatt ataacaagct 11580 ccatctgcct acgacaaaca gacctaaaat cgctcattgc atactcttca atcagccaca 11640 tagccctcgt agtaacagcc attctcatcc aaaccccctg aagcttcacc ggcgcagtca 11700 ttctcataat cgcccacggg cttacatcct cattactatt ctgcctagca aactcaaact 11760 acgaacgcac tcacagtcgc atcataatcc tctctcaagg acttcaaact ctactcccac 11820 taatagcttt ttgatgactt ctagcaagcc tcgctaacct cgccttaccc cccactatta 11880 acctactggg agaactctct gtgctagtaa ccacgttctc ctgatcaaat atcactctcc 11940 tacttacagg actcaacata ctagtcacag ccctatactc cctctacata tttaccacaa 12000 cacaatgggg ctcactcacc caccacatta acaacataaa accctcattc acacgagaaa 12060 acaccctcat gttcatacac ctatccccca ttctcctcct atccctcaac cccgacatca 12120 ttaccgggtt ttcctcttgt aaatatagtt taaccaaaac atcagattgt gaatctgaca 12180 acagaggctt acgacccctt atttaccgag aaagctcaca agaactgcta actcatgccc 12240 ccatgtctaa caacatggct ttctcaactt ttaaaggata acagctatcc attggtctta 12300 ggccccaaaa attttggtgc aactccaaat aaaagtaata accatgcaca ctactataac 12360 caccctaacc ctgacttccc taattccccc catccttacc accctcgtta accctaacaa 12420 aaaaaactca tacccccatt atgtaaaatc cattgtcgca tccaccttta ttatcagtct 12480 cttccccaca acaatattca tgtgcctaga ccaagaagtt attatctcga actgacactg 12540 agccacaacc caaacaaccc agctctccct aagcttcaaa ctagactact tctccataat 12600 attcatccct gtagcattgt tcgttacatg gtccatcata gaattctcac tgtgatatat 12660 aaactcagac ccaaacatta atcagttctt caaatatcta ctcatcttcc taattaccat 12720 actaatctta gttaccgcta acaacctatt ccaactgttc atcggctgag agggcgtagg 12780 aattatatcc ttcttgctca tcagttgatg atacgcccga gcagatgcca acacagcagc 12840 cattcaagca atcctataca accgtatcgg cgatatcggt ttcatcctcg ccttagcatg 12900 atttatccta cactccaact catgagaccc acaacaaata gcccttctaa acgctaatcc 12960 aagcctcacc ccactactag gcctcctcct agcagcagca ggcaaatcag cccaattagg 13020 tctccacccc tgactcccct cagccataga aggccccacc ccagtctcag ccctactcca 13080 ctcaagcact atagttgtag caggaatctt cttactcatc cgcttccacc ccctagcaga 13140 aaatagccca ctaatccaaa ctctaacact atgcttaggc gctatcacca ctctgttcgc 13200 agcagtctgc gcccttacac aaaatgacat caaaaaaatc gtagccttct ccacttcaag 13260 tcaactagga ctcataatag ttacaatcgg catcaaccaa ccacacctag cattcctgca 13320 catctgtacc cacgccttct tcaaagccat actatttatg tgctccgggt ccatcatcca 13380 caaccttaac aatgaacaag atattcgaaa aataggagga ctactcaaaa ccatacctct 13440 cacttcaacc tccctcacca ttggcagcct agcattagca ggaatacctt tcctcacagg 13500 tttctactcc aaagaccaca tcatcgaaac cgcaaacata tcatacacaa acgcctgagc 13560 cctatctatt actctcatcg ctacctccct gacaagcgcc tatagcactc gaataattct 13620 tctcacccta acaggtcaac ctcgcttccc cacccttact aacattaacg aaaataaccc 13680 caccctacta aaccccatta aacgcctggc agccggaagc ctattcgcag gatttctcat 13740 tactaacaac atttccccca catccccctt ccaaacaaca atccccctct acctaaaact 13800 cacagccctc gctgtcactt tcctaggact tctaacagcc ctagacctca actacctaac 13860 caacaaactt aaaataaaat ccccactatg cacattttat ttctccaaca tactcggatt 13920 ctaccctagc atcacacacc gcacaatccc ctatctaggc cttcttacga gccaaaacct 13980 gccgctactc ctcctagacc taacctgact agaaaagcta ttacctaaaa caatttcaca 14040 gcaccaaatc tccacctcca tcatcacctc aacccaaaaa ggcataatta aactttactt 14100 cctctctttc ttcttcccac tcatcctaac cctactccta atcacataac ctattccccc 14160 gagcaatctc aattacaata tatacaccaa caaacaatgt tcaaccagta actactacta 14220 atcaacgccc ataatcatac aaagcccccg caccaatagg atcctcccga atcaaccctg 14280 acccctctcc ttcataaatt attcagcttc ctacactatt aaagtttacc acaaccacca 14340 ccccatcata ctctttcacc cacagcacca atcctacctc catcgctaac cccactaaaa 14400 cactcaccaa gacctcaacc cctgaccccc atgcctcagg atactcctca atagccatcg 14460 ctgtagtata tccaaagaca accatcattc cccctaaata aattaaaaaa actattaaac 14520 ccatataacc tcccccaaaa ttcagaataa taacacaccc gaccacaccg ctaacaatca 14580 atactaaacc cccataaata ggagaaggct tagaagaaaa ccccacaaac cccattacta 14640 aacccacact caacagaaac aaagcataca tcattattct cgcacggact acaaccacga 14700 ccaatgatat gaaaaaccat cgttgtattt caactacaag aacaccaatg accccaatac 14760 gcaaaactaa ccccctaata aaattaatta accactcatt catcgacctc cccaccccat 14820 ccaacatctc cgcatgatga aacttcggct cactccttgg cgcctgcctg atcctccaaa 14880 tcaccacagg actattccta gccatgcact actcaccaga cgcctcaacc gccttttcat 14940 caatcgccca catcactcga gacgtaaatt atggctgaat catccgctac cttcacgcca 15000 atggcgcctc aatattcttt atctgcctct tcctacacat cgggcgaggc ctatattacg 15060 gatcatttct ctactcagaa acctgaaaca tcggcattat cctcctgctt gcaactatag 15120 caacagcctt cataggctat gtcctcccgt gaggccaaat atcattctga ggggccacag 15180 taattacaaa cttactatcc gccatcccat acattgggac agacctagtt caatgaatct 15240 gaggaggcta ctcagtagac agtcccaccc tcacacgatt ctttaccttt cacttcatct 15300 tgcccttcat tattgcagcc ctagcagcac tccacctcct attcttgcac gaaacgggat 15360 caaacaaccc cctaggaatc acctcccatt ccgataaaat caccttccac ccttactaca 15420 caatcaaaga cgccctcggc ttacttctct tccttctctc cttaatgaca ttaacactat 15480 tctcaccaga cctcctaggc gacccagaca attataccct agccaacccc ttaaacaccc 15540 ctccccacat caagcccgaa tgatatttcc tattcgccta cacaattctc cgatccgtcc 15600 ctaacaaact aggaggcgtc cttgccctat tactatccat cctcatccta gcaataatcc 15660 ccatcctcca tatatccaaa caacaaagca taatatttcg cccactaagc caatcacttt 15720 attgactcct agccgcagac ctcctcattc taacctgaat cggaggacaa ccagtaagct 15780 acccttttac catcattgga caagtagcat ccgtactata cttcacaaca atcctaatcc 15840 taataccaac tatctcccta attgaaaaca aaatactcaa atgggcctgt ccttgtagta 15900 taaactaata caccagtctt gtaaaccgga gatgaaaacc tttttccaag gacaaatcag 15960 agaaaaagtc tttaactcca ccattagcac ccaaagctaa gattctaatt taaactattc 16020 tctgttcttt catggggaag cagatttggg taccacccaa gtattgactc acccatcaac 16080 aaccgctatg tatytcgtac attactgcca gccaccatga atattgtacg gtaccataaa 16140 tacttgacca cctgtagtac ataaaaaccc aatccacatc aaaaccccct ccccatgctt 16200 acaagcaagt acagcaatcg accctcaact atcacacatc aactgcaact ccaaagccac 16260 ctctcaccca ctaggatacc aacaaaccta cccaccctta acagtacata gtacataaag 16320 ccatttaccg tacatagcac attacagtca aatcccttct cgtccccatg gatgaccccc 16380 ctcagatagg ggtcccttga ccaccatcct ccgtgaaatc aatatcccgc acaagagtgc 16440 tactctcctc gctccgggcc cataacactt gggggtagct aaagtgaact gtatccgaca 16500 tctggttcct acttcagggc cataaagcct aaatagccca cacgttcccc ttaaataaga 16560 catcacgatg 16570 // ID KX702184; SV 1; circular; genomic DNA; STD; HUM; 16570 BP. XX AC KX702184; XX DT 24-AUG-2016 (Rel. 129, Created) DT 24-AUG-2016 (Rel. 129, Last updated, Version 1) XX DE Homo sapiens haplogroup H8c mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16570 RA Greenspan B.; RT ; RL Submitted (12-AUG-2016) to the INSDC. RL Family Tree DNA - Genealogy by Genetics, Ltd., 1445 North Loop West, Suite RL 820, Houston, TX 77008, USA XX DR MD5; 19f156bc847713e71cd707111c5fd3a5. DR Ensembl-Gn; ENSG00000198695; homo_sapiens. DR Ensembl-Gn; ENSG00000198712; homo_sapiens. DR Ensembl-Gn; ENSG00000198763; homo_sapiens. DR Ensembl-Gn; ENSG00000198804; homo_sapiens. DR Ensembl-Gn; ENSG00000198840; homo_sapiens. DR Ensembl-Gn; ENSG00000198886; homo_sapiens. DR Ensembl-Gn; ENSG00000198888; homo_sapiens. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Gn; ENSG00000228253; homo_sapiens. DR Ensembl-Tr; ENST00000361227; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000361381; homo_sapiens. DR Ensembl-Tr; ENST00000361390; homo_sapiens. DR Ensembl-Tr; ENST00000361453; homo_sapiens. DR Ensembl-Tr; ENST00000361624; homo_sapiens. DR Ensembl-Tr; ENST00000361681; homo_sapiens. DR Ensembl-Tr; ENST00000361739; homo_sapiens. DR Ensembl-Tr; ENST00000361851; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX FH Key Location/Qualifiers FH FT source 1..16570 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="FTDNA B68141" FT /mol_type="genomic DNA" FT /note="ethnicity:Armenian; origin_locality:Turkey: FT Neveshir" FT /db_xref="taxon:9606" FT /haplogroup="H8c" FT D-loop complement(join(16029..16570,1..579)) FT tRNA 579..649 FT /product="tRNA-Phe" FT rRNA 650..1603 FT /product="12S ribosomal RNA" FT tRNA 1604..1672 FT /product="tRNA-Val" FT rRNA 1673..3230 FT /product="16S ribosomal RNA" FT tRNA 3231..3305 FT /product="tRNA-Leu" FT /note="codons recognized: UUR" FT gene 3308..4263 FT /gene="ND1" FT CDS 3308..4263 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4262..4263,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:U5Z754" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:U5Z754" FT /protein_id="AOD41847.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPITISSIPPQT" FT tRNA 4264..4332 FT /product="tRNA-Ile" FT tRNA complement(4330..4401) FT /product="tRNA-Gln" FT tRNA 4403..4470 FT /product="tRNA-Met" FT gene 4471..5512 FT /gene="ND2" FT CDS 4471..5512 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5512,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXY9" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q7GXY9" FT /protein_id="AOD41848.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPFLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5513..5580 FT /product="tRNA-Trp" FT tRNA complement(5588..5656) FT /product="tRNA-Ala" FT tRNA complement(5658..5730) FT /product="tRNA-Asn" FT tRNA complement(5762..5827) FT /product="tRNA-Cys" FT tRNA complement(5827..5892) FT /product="tRNA-Tyr" FT gene 5905..7446 FT /gene="COX1" FT CDS 5905..7446 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:U5YWV7" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:U5YWV7" FT /protein_id="AOD41849.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7446..7517) FT /product="tRNA-Ser" FT /note="codons recognized: UCN" FT tRNA 7519..7586 FT /product="tRNA-Asp" FT gene 7587..8270 FT /gene="COX2" FT CDS 7587..8270 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /db_xref="GOA:U5Z487" FT /db_xref="InterPro:IPR001505" FT /db_xref="InterPro:IPR002429" FT /db_xref="InterPro:IPR008972" FT /db_xref="InterPro:IPR011759" FT /db_xref="InterPro:IPR014222" FT /db_xref="InterPro:IPR034210" FT /db_xref="InterPro:IPR036257" FT /db_xref="UniProtKB/TrEMBL:U5Z487" FT /protein_id="AOD41850.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8296..8365 FT /product="tRNA-Lys" FT gene 8367..8573 FT /gene="ATP8" FT CDS 8367..8573 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /db_xref="GOA:U5YV54" FT /db_xref="InterPro:IPR001421" FT /db_xref="InterPro:IPR039017" FT /db_xref="UniProtKB/TrEMBL:U5YV54" FT /protein_id="AOD41851.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8528..9208 FT /gene="ATP6" FT CDS 8528..9208 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B1D3" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B1D3" FT /protein_id="AOD41852.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMTMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9208..9991 FT /gene="COX3" FT CDS 9208..9991 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9991,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AOD41853.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9992..10059 FT /product="tRNA-Gly" FT gene 10060..10405 FT /gene="ND3" FT CDS 10060..10405 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10405,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXZ5" FT /db_xref="InterPro:IPR000440" FT /db_xref="InterPro:IPR038430" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ5" FT /protein_id="AOD41854.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWTE" FT tRNA 10406..10470 FT /product="tRNA-Arg" FT gene 10471..10767 FT /gene="ND4L" FT CDS 10471..10767 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AOD41855.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10761..12138 FT /gene="ND4" FT CDS 10761..12138 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12138,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:H9EC08" FT /db_xref="InterPro:IPR000260" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="InterPro:IPR010227" FT /db_xref="UniProtKB/TrEMBL:H9EC08" FT /protein_id="AOD41856.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12139..12207 FT /product="tRNA-His" FT tRNA 12208..12266 FT /product="tRNA-Ser" FT /note="codons recognized: AGY" FT tRNA 12267..12337 FT /product="tRNA-Leu" FT /note="codons recognized: CUN" FT gene 12338..14149 FT /gene="ND5" FT CDS 12338..14149 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:A6Z477" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:A6Z477" FT /protein_id="AOD41857.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT TGSLFAGFLITNNISPASPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14150..14674) FT /gene="ND6" FT CDS complement(14150..14674) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /db_xref="GOA:U5Z977" FT /db_xref="InterPro:IPR001457" FT /db_xref="UniProtKB/TrEMBL:U5Z977" FT /protein_id="AOD41858.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14675..14743) FT /product="tRNA-Glu" FT gene 14748..15888 FT /gene="CYTB" FT CDS 14748..15888 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15888,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q6VLV1" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q6VLV1" FT /protein_id="AOD41859.1" FT /translation="MTPMRKTNPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15889..15954 FT /product="tRNA-Thr" FT tRNA complement(15956..16024) FT /product="tRNA-Pro" XX SQ Sequence 16570 BP; 5118 A; 5188 C; 2174 G; 4090 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtatgcacgc gatagcattg cgagacgctg gagccggagc accttatgtc 120 gcagtatctg tctttgattc ctgccccatc ccattattta tcgcacctac gttcaatatt 180 acaggcgaac atacctacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattgaat gtctgcacag ccgctttcca cacagacatc ataacaaaaa atttccacca 300 aacccccccc tccccccgct tctggccaca gcacttaaac acatctctgc caaaccccaa 360 aaacaaagaa ccctaacacc agcctaacca gatttcaaat tttatctttt ggcggtatgc 420 acttttaaca gtcacccccc aactaacaca ttattttccc ctcccactcc catactacta 480 atctcatcaa tacaaccccc gcccatccta cccagcacac acacaccgct gctaacccca 540 taccccgaac caaccaaacc ccaaagacac cccccacagt ttatgtagct tacctcctca 600 aagcaataca ctgaaaatgt ttagacgggc tcacatcacc ccataaacaa ataggtttgg 660 tcctagcctt tctattagct cttagtaaga ttacacatgc aagcatcccc attccagtga 720 gttcaccctc taaatcacca cgatcaaaag ggacaagcat caagcacgca gcaatgcagc 780 tcaaaacgct tagcctagcc acacccccac gggaaacagc agtgattaac ctttagcaat 840 aaacgaaagt ttaactaagc tatactaacc ccagggttgg tcaatttcgt gccagccacc 900 gcggtcacac gattaaccca agtcaataga agccggcgta aagagtgttt tagatcaccc 960 cctccccaat aaagctaaaa ctcacctgag ttgtaaaaaa ctccagttga cacaaaatag 1020 actacgaaag tggctttaac atatctgaac acacaatagc taagacccaa actgggatta 1080 gataccccac tatgcttagc cctaaacctc aacagttaaa tcaacaaaac tgctcgccag 1140 aacactacga gccacagctt aaaactcaaa ggacctggcg gtgcttcata tccctctaga 1200 ggagcctgtt ctgtaatcga taaaccccga tcaacctcac cacctcttgc tcagcctata 1260 taccgccatc ttcagcaaac cctgatgaag gctacaaagt aagcgcaagt acccacgtaa 1320 agacgttagg tcaaggtgta gcccatgagg tggcaagaaa tgggctacat tttctacccc 1380 agaaaactac gatagccctt atgaaactta agggtcgaag gtggatttag cagtaaactg 1440 agagtagagt gcttagttga acagggccct gaagcgcgta cacaccgccc gtcaccctcc 1500 tcaagtatac ttcaaaggac atttaactaa aacccctacg catttatata gaggagacaa 1560 gtcgtaacat ggtaagtgta ctggaaagtg cacttggacg aaccagagtg tagcttaaca 1620 caaagcaccc aacttacact taggagattt caacttaact tgaccgctct gagctaaacc 1680 tagccccaaa cccactccac cttactacca gacaacctta gccaaaccat ttacccaaat 1740 aaagtatagg cgatagaaat tgaaacctgg cgcaatagat atagtaccgc aagggaaaga 1800 tgaaaaatta taaccaagca taatatagca aggactaacc cctatacctt ctgcataatg 1860 aattaactag aaataacttt gcaaggagag ccaaagctaa gacccccgaa accagacgag 1920 ctacctaaga acagctaaaa gagcacaccc gtctatgtag caaaatagtg ggaagattta 1980 taggtagagg cgacaaacct accgagcctg gtgatagctg gttgtccaag atagaatctt 2040 agttcaactt taaatttgcc cacagaaccc tctaaatccc cttgtaaatt taactgttag 2100 tccaaagagg aacagctctt tggacactag gaaaaaacct tgtagagaga gtaaaaaatt 2160 taacacccat agtaggccta aaagcagcca ccaattaaga aagcgttcaa gctcaacacc 2220 cactacctaa aaaatcccaa acatataact gaactcctca cacccaattg gaccaatcta 2280 tcaccctata gaagaactaa tgttagtata agtaacatga aaacattctc ctccgcataa 2340 gcctgcgtca gattaaaaca ctgaactgac aattaacagc ccaatatcta caatcaacca 2400 acaagtcatt attaccctca ctgtcaaccc aacacaggca tgctcataag gaaaggttaa 2460 aaaaagtaaa aggaactcgg caaatcttac cccgcctgtt taccaaaaac atcacctcta 2520 gcatcaccag tattagaggc accgcctgcc cagtgacaca tgtttaacgg ccgcggtacc 2580 ctaaccgtgc aaaggtagca taatcacttg ttccttaaat agggacctgt atgaatggct 2640 ccacgagggt tcagctgtct cttactttta accagtgaaa ttgacctgcc cgtgaagagg 2700 cgggcataac acagcaagac gagaagaccc tatggagctt taatttatta atgcaaacag 2760 tacctaacaa acccacaggt cctaaactac caaacctgca ttaaaaattt cggttggggc 2820 gacctcggag cagaacccaa cctccgagca gtacatgcta agacttcacc agtcaaagcg 2880 aactactata ctcaattgat ccaataactt gaccaacgga acaagttacc ctagggataa 2940 cagcgcaatc ctattctaga gtccatatca acaatagggt ttacgacctc gatgttggat 3000 caggacatcc cgatggtgca gccgctatta aaggttcgtt tgttcaacga ttaaagtcct 3060 acgtgatctg agttcagacc ggagtaatcc aggtcggttt ctatctactt caaattcctc 3120 cctgtacgaa aggacaagag aaataaggcc tacttcacaa agcgccttcc cccgtaaatg 3180 atatcatctc aacttagtat tatacccaca cccacccaag aacagggttt gttaagatgg 3240 cagagcccgg taatcgcata aaacttaaaa ctttacagtc agaggttcaa ttcctcttct 3300 taacaacata cccatggcca acctcctact cctcattgta cccattctaa tcgcaatggc 3360 attcctaatg cttaccgaac gaaaaattct aggctatata caactacgca aaggccccaa 3420 cgttgtaggc ccctacgggc tactacaacc cttcgctgac gccataaaac tcttcaccaa 3480 agagccccta aaacccgcca catctaccat caccctctac atcaccgccc cgaccttagc 3540 tctcaccatc gctcttctac tatgaacccc cctccccata cccaaccccc tggtcaacct 3600 caacctaggc ctcctattta ttctagccac ctctagccta gccgtttact caatcctctg 3660 atcagggtga gcatcaaact caaactacgc cctgatcggc gcactgcgag cagtagccca 3720 aacaatctca tatgaagtca ccctagccat cattctacta tcaacattac taataagtgg 3780 ctcctttaac ctctccaccc ttatcacaac acaagaacac ctctgattac tcctgccatc 3840 atgacccttg gccataatat gatttatctc cacactagca gagaccaacc gaaccccctt 3900 cgaccttgcc gaaggggagt ccgaactagt ctcaggcttc aacatcgaat acgccgcagg 3960 ccccttcgcc ctattcttca tagccgaata cacaaacatt attataataa acaccctcac 4020 cactacaatc ttcctaggaa caacatatga cgcactctcc cctgaactct acacaacata 4080 ttttgtcacc aagaccctac ttctaacctc cctgttctta tgaattcgaa cagcataccc 4140 ccgattccgc tacgaccaac tcatacacct cctatgaaaa aacttcctac cactcaccct 4200 agcattactt atatgatatg tctccatacc cattacaatc tccagcattc cccctcaaac 4260 ctaagaaata tgtctgataa aagagttact ttgatagagt aaataatagg agcttaaacc 4320 cccttatttc taggactatg agaatcgaac ccatccctga gaatccaaaa ttctccgtgc 4380 cacctatcac accccatcct aaagtaaggt cagctaaata agctatcggg cccatacccc 4440 gaaaatgttg gttataccct tcccgtacta attaatcccc tggcccaacc cgtcatctac 4500 tctaccatct ttgcaggcac actcatcaca gcgctaagct cgcactgatt ttttacctga 4560 gtaggcctag aaataaacat gctagctttt attccagttc taaccaaaaa aataaaccct 4620 cgttccacag aagctgccat caagtatttc ctcacgcaag caaccgcatc cataatcctt 4680 ctaatagcta tcctcttcaa caatatactc tccggacaat gaaccataac caatactacc 4740 aatcaatact catcattaat aatcataatg gctatagcaa taaaactagg aatagccccc 4800 tttcacttct gagtcccaga ggttacccaa ggcacccctc tgacatccgg cctgcttctt 4860 ctcacatgac aaaaactagc ccccatctca atcatatacc aaatctctcc ctcactaaac 4920 gtaagccttc tcctcactct ctcaatctta tccatcatag caggcagttg aggtggatta 4980 aaccaaaccc agctacgcaa aatcttagca tactcctcaa ttacccacat aggatgaata 5040 atagcagttc taccgtacaa ccctaacata accattctta atttaactat ttatattatc 5100 ctaactacta ccgcattcct actactcaac ttaaactcca gcaccacgac cctactacta 5160 tctcgcacct gaaacaagct aacatgacta acacccttaa ttccatccac cctcctctcc 5220 ctaggaggcc tgcccccgct aaccggcttt ttgcccaaat gggccattat cgaagaattc 5280 acaaaaaaca atagcctcat catccccacc atcatagcca ccatcaccct ccttaacctc 5340 tacttctacc tacgcctaat ctactccacc tcaatcacac tactccccat atctaacaac 5400 gtaaaaataa aatgacagtt tgaacataca aaacccaccc cattcctccc cacactcatc 5460 gcccttacca cgctactcct acctatctcc ccttttatac taataatctt atagaaattt 5520 aggttaaata cagaccaaga gccttcaaag ccctcagtaa gttgcaatac ttaatttctg 5580 taacagctaa ggactgcaaa accccactct gcatcaactg aacgcaaatc agccacttta 5640 attaagctaa gcccttacta gaccaatggg acttaaaccc acaaacactt agttaacagc 5700 taagcaccct aatcaactgg cttcaatcta cttctcccgc cgccgggaaa aaaggcggga 5760 gaagccccgg caggtttgaa gctgcttctt cgaatttgca attcaatatg aaaatcacct 5820 cggagctggt aaaaagaggc ctaacccctg tctttagatt tacagtccaa tgcttcactc 5880 agccatttta cctcaccccc actgatgttc gccgaccgtt gactattctc tacaaaccac 5940 aaagacattg gaacactata cctattattc ggcgcatgag ctggagtcct aggcacagct 6000 ctaagcctcc ttattcgagc cgagctgggc cagccaggca accttctagg taacgaccac 6060 atctacaacg ttatcgtcac agcccatgca tttgtaataa tcttcttcat agtaataccc 6120 atcataatcg gaggctttgg caactgacta gttcccctaa taatcggtgc ccccgatatg 6180 gcgtttcccc gcataaacaa cataagcttc tgactcttac ctccctctct cctactcctg 6240 ctcgcatctg ctatagtgga ggccggagca ggaacaggtt gaacagtcta ccctccctta 6300 gcagggaact actcccaccc tggagcctcc gtagacctaa ccatcttctc cttacaccta 6360 gcaggtgtct cctctatctt aggggccatc aatttcatca caacaattat caatataaaa 6420 ccccctgcca taacccaata ccaaacgccc ctcttcgtct gatccgtcct aatcacagca 6480 gtcctacttc tcctatctct cccagtccta gctgctggca tcactatact actaacagac 6540 cgcaacctca acaccacctt cttcgacccc gccggaggag gagaccccat tctataccaa 6600 cacctattct gatttttcgg tcaccctgaa gtttatattc ttatcctacc aggcttcgga 6660 ataatctccc atattgtaac ttactactcc ggaaaaaaag aaccatttgg atacataggt 6720 atggtctgag ctatgatatc aattggcttc ctagggttta tcgtgtgagc acaccatata 6780 tttacagtag gaatagacgt agacacacga gcatatttca cctccgctac cataatcatc 6840 gctatcccca ccggcgtcaa agtatttagc tgactcgcca cactccacgg aagcaatatg 6900 aaatgatctg ctgcagtgct ctgagcccta ggattcatct ttcttttcac cgtaggtggc 6960 ctgactggca ttgtattagc aaactcatca ctagacatcg tactacacga cacgtactac 7020 gttgtagccc acttccacta tgtcctatca ataggagctg tatttgccat cataggaggc 7080 ttcattcact gatttcccct attctcaggc tacaccctag accaaaccta cgccaaaatc 7140 catttcacta tcatattcat cggcgtaaat ctaactttct tcccacaaca ctttctcggc 7200 ctatccggaa tgccccgacg ttactcggac taccccgatg catacaccac atgaaacatc 7260 ctatcatctg taggctcatt catttctcta acagcagtaa tattaataat tttcatgatt 7320 tgagaagcct tcgcttcgaa gcgaaaagtc ctaatagtag aagaaccctc cataaacctg 7380 gagtgactat atggatgccc cccaccctac cacacattcg aagaacccgt atacataaaa 7440 tctagacaaa aaaggaagga atcgaacccc ccaaagctgg tttcaagcca accccatggc 7500 ctccatgact ttttcaaaaa ggtattagaa aaaccatttc ataactttgt caaagttaaa 7560 ttataggcta aatcctatat atcttaatgg cacatgcagc gcaagtaggt ctacaagacg 7620 ctacttcccc tatcatagaa gagcttatca cctttcatga tcacgccctc ataatcattt 7680 tccttatctg cttcctagtc ctgtatgccc ttttcctaac actcacaaca aaactaacta 7740 atactaacat ctcagacgct caggaaatag aaaccgtctg aactatcctg cccgccatca 7800 tcctagtcct catcgccctc ccatccctac gcatccttta cataacagac gaggtcaacg 7860 atccctccct taccatcaaa tcaattggcc accaatggta ctgaacctac gagtacaccg 7920 actacggcgg actaatcttc aactcctaca tacttccccc attattccta gaaccaggcg 7980 acctgcgact ccttgacgtt gacaatcgag tagtactccc gattgaagcc cccattcgta 8040 taataattac atcacaagac gtcttgcact catgagctgt ccccacatta ggcttaaaaa 8100 cagatgcaat tcccggacgt ctaaaccaaa ccactttcac cgctacacga ccgggggtat 8160 actacggtca atgctctgaa atctgtggag caaaccacag tttcatgccc atcgtcctag 8220 aattaattcc cctaaaaatc tttgaaatag ggcccgtatt taccctatag caccccctct 8280 accccctcta gagcccactg taaagctaac ttagcattaa ccttttaagt taaagattaa 8340 gagaaccaac acctctttac agtgaaatgc cccaactaaa tactaccgta tggcccacca 8400 taattacccc catactcctt acactattcc tcatcaccca actaaaaata ttaaacacaa 8460 actaccacct acctccctca ccaaagccca taaaaataaa aaattataac aaaccctgag 8520 aaccaaaatg aacgaaaatc tgttcgcttc attcattgcc cccacaatcc taggcctacc 8580 cgccgcagta ctgatcattc tatttccccc tctattgatc cccacctcca aatatctcat 8640 caacaaccga ctaatcacca cccaacaatg actaatcaaa ctaacctcaa aacaaatgat 8700 aaccatacac aacactaaag gacgaacctg atctcttata ctagtatcct taatcatttt 8760 tattgccaca actaacctcc tcggactcct gcctcactca tttacaccaa ccacccaact 8820 atctataaac ctagccatgg ccatcccctt atgagcgggc gcagtgatta taggctttcg 8880 ctctaagatt aaaaatgccc tagcccactt cttaccacaa ggcacaccta caccccttat 8940 ccccatacta gttattatcg aaaccatcag cctactcatt caaccaatag ccctggccgt 9000 acgcctaacc gctaacatta ctgcaggcca cctactcatg cacctaattg gaagcgccac 9060 cctagcaata tcaaccatta accttccctc tacacttatc atcttcacaa ttctaattct 9120 actgactatc ctagaaatcg ctgtcgcctt aatccaagcc tacgttttca cacttctagt 9180 aagcctctac ctgcacgaca acacataatg acccaccaat cacatgccta tcatatagta 9240 aaacccagcc catgacccct aacaggggcc ctctcagccc tcctaatgac ctccggccta 9300 gccatgtgat ttcacttcca ctccataacg ctcctcatac taggcctact aaccaacaca 9360 ctaaccatat accaatgatg gcgcgatgta acacgagaaa gcacgtacca aggccaccac 9420 acaccacctg tccaaaaagg ccttcgatac gggataatcc tatttattac ctcagaagtt 9480 tttttcttcg caggattttt ctgagccttt taccactcca gcctagcccc taccccccaa 9540 ttaggagggc actggccccc aacaggcatc accccgctaa atcccctaga agtcccactc 9600 ctaaacacat ccgtattact cgcatcagga gtatcaatca cctgagctca ccatagtcta 9660 atagaaaaca accgaaacca aataattcaa gcactgctta ttacaatttt actgggtctc 9720 tattttaccc tcctacaagc ctcagagtac ttcgagtctc ccttcaccat ttccgacggc 9780 atctacggct caacattttt tgtagccaca ggcttccacg gacttcacgt cattattggc 9840 tcaactttcc tcactatctg cttcatccgc caactaatat ttcactttac atccaaacat 9900 cactttggct tcgaagccgc cgcctgatac tggcattttg tagatgtggt ttgactattt 9960 ctgtatgtct ccatctattg atgagggtct tactctttta gtataaatag taccgttaac 10020 ttccaattaa ctagttttga caacattcaa aaaagagtaa taaacttcgc cttaatttta 10080 ataatcaaca ccctcctagc cttactacta ataattatta cattttgact accacaactc 10140 aacggctaca tagaaaaatc caccccttac gagtgcggct tcgaccctat atcccccgcc 10200 cgcgtccctt tctccataaa attcttctta gtagctatta ccttcttatt atttgatcta 10260 gaaattgccc tccttttacc cctaccatga gccctacaaa caactaacct gccactaata 10320 gttatgtcat ccctcttatt aatcatcatc ctagccctaa gtctggccta tgagtgacta 10380 caaaaaggat tagactgaac cgaattggta tatagtttaa acaaaacgaa tgatttcgac 10440 tcattaaatt atgataatca tatttaccaa atgcccctca tttacataaa tattatacta 10500 gcatttacca tctcacttct aggaatacta gtatatcgct cacacctcat atcctcccta 10560 ctatgcctag aaggaataat actatcgctg ttcattatag ctactctcat aaccctcaac 10620 acccactccc tcttagccaa tattgtgcct attgccatac tagtctttgc cgcctgcgaa 10680 gcagcggtgg gcctagccct actagtctca atctccaaca catatggcct agactacgta 10740 cataacctaa acctactcca atgctaaaac taatcgtccc aacaattata ttactaccac 10800 tgacatgact ttccaaaaaa cacataattt gaatcaacac aaccacccac agcctaatta 10860 ttagcatcat ccctctacta ttttttaacc aaatcaacaa caacctattt agctgttccc 10920 caaccttttc ctccgacccc ctaacaaccc ccctcctaat actaactacc tgactcctac 10980 ccctcacaat catggcaagc caacgccact tatccagtga accactatca cgaaaaaaac 11040 tctacctctc tatactaatc tccctacaaa tctccttaat tataacattc acagccacag 11100 aactaatcat attttatatc ttcttcgaaa ccacacttat ccccaccttg gctatcatca 11160 cccgatgagg caaccagcca gaacgcctga acgcaggcac atacttccta ttctacaccc 11220 tagtaggctc ccttccccta ctcatcgcac taatttacac tcacaacacc ctaggctcac 11280 taaacattct actactcact ctcactgccc aagaactatc aaactcctga gccaacaact 11340 taatatgact agcttacaca atagctttta tagtaaagat acctctttac ggactccact 11400 tatgactccc taaagcccat gtcgaagccc ccatcgctgg gtcaatagta cttgccgcag 11460 tactcttaaa actaggcggc tatggtataa tacgcctcac actcattctc aaccccctga 11520 caaaacacat agcctacccc ttccttgtac tatccctatg aggcataatt ataacaagct 11580 ccatctgcct acgacaaaca gacctaaaat cgctcattgc atactcttca atcagccaca 11640 tagccctcgt agtaacagcc attctcatcc aaaccccctg aagcttcacc ggcgcagtca 11700 ttctcataat cgcccacggg cttacatcct cattactatt ctgcctagca aactcaaact 11760 acgaacgcac tcacagtcgc atcataatcc tctctcaagg acttcaaact ctactcccac 11820 taatagcttt ttgatgactt ctagcaagcc tcgctaacct cgccttaccc cccactatta 11880 acctactggg agaactctct gtgctagtaa ccacgttctc ctgatcaaat atcactctcc 11940 tacttacagg actcaacata ctagtcacag ccctatactc cctctacata tttaccacaa 12000 cacaatgggg ctcactcacc caccacatta acaacataaa accctcattc acacgagaaa 12060 acaccctcat gttcatacac ctatccccca ttctcctcct atccctcaac cccgacatca 12120 ttaccgggtt ttcctcttgt aaatatagtt taaccaaaac atcagattgt gaatctgaca 12180 acagaggctt acgacccctt atttaccgag aaagctcaca agaactgcta actcatgccc 12240 ccatgtctaa caacatggct ttctcaactt ttaaaggata acagctatcc attggtctta 12300 ggccccaaaa attttggtgc aactccaaat aaaagtaata accatgcaca ctactataac 12360 caccctaacc ctgacttccc taattccccc catccttacc accctcgtta accctaacaa 12420 aaaaaactca tacccccatt atgtaaaatc cattgtcgca tccaccttta ttatcagtct 12480 cttccccaca acaatattca tgtgcctaga ccaagaagtt attatctcga actgacactg 12540 agccacaacc caaacaaccc agctctccct aagcttcaaa ctagactact tctccataat 12600 attcatccct gtagcattgt tcgttacatg gtccatcata gaattctcac tgtgatatat 12660 aaactcagac ccaaacatta atcagttctt caaatatcta ctcatcttcc taattaccat 12720 actaatctta gttaccgcta acaacctatt ccaactgttc atcggctgag agggcgtagg 12780 aattatatcc ttcttgctca tcagttgatg atacgcccga gcagatgcca acacagcagc 12840 cattcaagca atcctataca accgtatcgg cgatatcggt ttcatcctcg ccttagcatg 12900 atttatccta cactccaact catgagaccc acaacaaata gcccttctaa acgctaatcc 12960 aagcctcacc ccactactag gcctcctcct agcagcagca ggcaaatcag cccaattagg 13020 tctccacccc tgactcccct cagccataga aggccccacc ccagtctcag ccctactcca 13080 ctcaagcact atagttgtag ccggaatctt cttactcatc cgcttccacc ccctagcaga 13140 aaatagccca ctaatccaaa ctctaacact atgcttaggc gctatcacca ctctgttcgc 13200 agcagtctgc gcccttacac aaaatgacat caaaaaaatc gtagccttct ccacttcaag 13260 tcaactagga ctcataatag ttacaatcgg catcaaccaa ccacacctag cattcctgca 13320 catctgtacc cacgccttct tcaaagccat actatttatg tgctccgggt ccatcatcca 13380 caaccttaac aatgaacaag atattcgaaa aataggagga ctactcaaaa ccatacctct 13440 cacttcaacc tccctcacca ttggcagcct agcattagca ggaatacctt tcctcacagg 13500 tttctactcc aaagaccaca tcatcgaaac cgcaaacata tcatacacaa acgcctgagc 13560 cctatctatt actctcatcg ctacctccct gacaagcgcc tatagcactc gaataattct 13620 tctcacccta acaggtcaac ctcgcttccc cacccttact aacattaacg aaaataaccc 13680 caccctacta aaccccatta aacgcctggc aaccggaagc ctattcgcag gatttctcat 13740 tactaacaac atttcccccg catccccctt ccaaacaaca atccccctct acctaaaact 13800 cacagccctc gctgtcactt tcctaggact tctaacagcc ctagacctca actacctaac 13860 caacaaactt aaaataaaat ccccactatg cacattttat ttctccaaca tactcggatt 13920 ctaccctagc atcacacacc gcacaatccc ctatctaggc cttcttacga gccaaaacct 13980 gcccctactc ctcctagacc taacctgact agaaaagcta ttacctaaaa caatttcaca 14040 gcaccaaatc tccacctcca tcatcacctc aacccaaaaa ggcataatta aactttactt 14100 cctctctttc ttcttcccac tcatcctaac cctactccta atcacataac ctattccccc 14160 gagcaatctc aattacaata tatacaccaa caaacaatgt tcaaccagta actactacta 14220 atcaacgccc ataatcatac aaagcccccg caccaatagg atcctcccga atcaaccctg 14280 acccctctcc ttcataaatt attcagcttc ctacactatt aaagtttacc acaaccacca 14340 ccccatcata ctctttcacc cacagcacca atcctacctc catcgctaac cccactaaaa 14400 cactcaccaa gacctcaacc cctgaccccc atgcctcagg atactcctca atagccatcg 14460 ctgtagtata tccaaagaca accatcattc cccctaaata aattaaaaaa actattaaac 14520 ccatataacc tcccccaaaa ttcagaataa taacacaccc gaccacaccg ctaacaatca 14580 atactaaacc cccataaata ggagaaggct tagaagaaaa ccccacaaac cccattacta 14640 aacccacact caacagaaac aaagcataca tcattattct cgcacggact acaaccacga 14700 ccaatgatat gaaaaaccat cgttgtattt caactacaag aacaccaatg accccaatac 14760 gcaaaactaa ccccctaata aaattaatta accactcatt catcgacctc cccaccccat 14820 ccaacatctc cgcatgatga aacttcggct cactccttgg cgcctgcctg atcctccaaa 14880 tcaccacagg actattccta gccatgcact actcaccaga cgcctcaacc gccttttcat 14940 caatcgccca catcactcga gacgtaaatt atggctgaat catccgctac cttcacgcca 15000 atggcgcctc aatattcttt atctgcctct tcctacacat cgggcgaggc ctatattacg 15060 gatcatttct ctactcagaa acctgaaaca tcggcattat cctcctgctt gcaactatag 15120 caacagcctt cataggctat gtcctcccgt gaggccaaat atcattctga ggggccacag 15180 taattacaaa cttactatcc gccatcccat acattgggac agacctagtt caatgaatct 15240 gaggaggcta ctcagtagac agtcccaccc tcacacgatt ctttaccttt cacttcatct 15300 tgcccttcat tattgcagcc ctagcagcac tccacctcct attcttgcac gaaacgggat 15360 caaacaaccc cctaggaatc acctcccatt ccgataaaat caccttccac ccttactaca 15420 caatcaaaga cgccctcggc ttacttctct tccttctctc cttaatgaca ttaacactat 15480 tctcaccaga cctcctaggc gacccagaca attataccct agccaacccc ttaaacaccc 15540 ctccccacat caagcccgaa tgatatttcc tattcgccta cacaattctc cgatccgtcc 15600 ctaacaaact aggaggcgtc cttgccctat tactatccat cctcatccta gcaataatcc 15660 ccatcctcca tatatccaaa caacaaagca taatatttcg cccactaagc caatcacttt 15720 attgactcct agccgcagac ctcctcattc taacctgaat cggaggacaa ccagtaagct 15780 acccttttac catcattgga caagtagcat ccgtactata cttcacaaca atcctaatcc 15840 taataccaac tatctcccta attgaaaaca aaatactcaa atgggcctgt ccttgtagta 15900 taaactaata caccagtctt gtaaaccgga gatgaaaacc tttttccaag gacaaatcag 15960 agaaaaagtc tttaactcca ccattagcac ccaaagctaa gattctaatt taaactattc 16020 tctgttcttt catggggaag cagatttggg taccacccaa gtattgactc acccatcaac 16080 aaccgctatg tatctcgtac attactgcca gccaccatga atattgtacg gtaccataaa 16140 tacttgacca cctgtagtac ataaaaaccc aatccacatc aaaaccccct ccccatgctt 16200 acaagcaagt acagcaatca accctcaact atcacacatc aactgcaact ccaaagccac 16260 ccctcaccca ctaggatacc aacaaaccca cccatcctta acagtacata gtacataaag 16320 ccatttaccg tacatagcac attacagtca aatcccttct cgcccccatg gatgaccccc 16380 ctcagatagg ggtcccttga ccaccatcct ccgtgaaatc aatatcccgc acaagagtgc 16440 tactctcctc gctccgggcc cataacactt gggggtagct aaagtgaact gtatccgaca 16500 tctggttcct acttcagggt cataaagcct aaatagccca cacgttcccc ttaaataaga 16560 catcacgatg 16570 // ID KX702185; SV 1; circular; genomic DNA; STD; HUM; 16569 BP. XX AC KX702185; XX DT 24-AUG-2016 (Rel. 129, Created) DT 24-AUG-2016 (Rel. 129, Last updated, Version 1) XX DE Homo sapiens haplogroup H mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16569 RA Greenspan B.; RT ; RL Submitted (12-AUG-2016) to the INSDC. RL Family Tree DNA - Genealogy by Genetics, Ltd., 1445 North Loop West, Suite RL 820, Houston, TX 77008, USA XX DR MD5; aa2218a7baf2508d585b172d2af70130. DR Ensembl-Gn; ENSG00000198695; homo_sapiens. DR Ensembl-Gn; ENSG00000198712; homo_sapiens. DR Ensembl-Gn; ENSG00000198763; homo_sapiens. DR Ensembl-Gn; ENSG00000198786; homo_sapiens. DR Ensembl-Gn; ENSG00000198804; homo_sapiens. DR Ensembl-Gn; ENSG00000198840; homo_sapiens. DR Ensembl-Gn; ENSG00000198886; homo_sapiens. DR Ensembl-Gn; ENSG00000198888; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Tr; ENST00000361227; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000361381; homo_sapiens. DR Ensembl-Tr; ENST00000361390; homo_sapiens. DR Ensembl-Tr; ENST00000361453; homo_sapiens. DR Ensembl-Tr; ENST00000361567; homo_sapiens. DR Ensembl-Tr; ENST00000361624; homo_sapiens. DR Ensembl-Tr; ENST00000361681; homo_sapiens. DR Ensembl-Tr; ENST00000361739; homo_sapiens. XX FH Key Location/Qualifiers FH FT source 1..16569 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="FTDNA 173902" FT /mol_type="genomic DNA" FT /note="ethnicity:Armenian; origin_locality:Turkey: Amasya" FT /db_xref="taxon:9606" FT /haplogroup="H" FT D-loop complement(join(16028..16569,1..578)) FT tRNA 578..648 FT /product="tRNA-Phe" FT rRNA 649..1602 FT /product="12S ribosomal RNA" FT tRNA 1603..1671 FT /product="tRNA-Val" FT rRNA 1672..3229 FT /product="16S ribosomal RNA" FT tRNA 3230..3304 FT /product="tRNA-Leu" FT /note="codons recognized: UUR" FT gene 3307..4262 FT /gene="ND1" FT CDS 3307..4262 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4261..4262,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:U5Z754" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:U5Z754" FT /protein_id="AOD41873.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPITISSIPPQT" FT tRNA 4263..4331 FT /product="tRNA-Ile" FT tRNA complement(4329..4400) FT /product="tRNA-Gln" FT tRNA 4402..4469 FT /product="tRNA-Met" FT gene 4470..5511 FT /gene="ND2" FT CDS 4470..5511 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5511,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXY9" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q7GXY9" FT /protein_id="AOD41874.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPFLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5512..5579 FT /product="tRNA-Trp" FT tRNA complement(5587..5655) FT /product="tRNA-Ala" FT tRNA complement(5657..5729) FT /product="tRNA-Asn" FT tRNA complement(5761..5826) FT /product="tRNA-Cys" FT tRNA complement(5826..5891) FT /product="tRNA-Tyr" FT gene 5904..7445 FT /gene="COX1" FT CDS 5904..7445 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:U5YWV7" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:U5YWV7" FT /protein_id="AOD41875.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7445..7516) FT /product="tRNA-Ser" FT /note="codons recognized: UCN" FT tRNA 7518..7585 FT /product="tRNA-Asp" FT gene 7586..8269 FT /gene="COX2" FT CDS 7586..8269 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /db_xref="GOA:U5Z487" FT /db_xref="InterPro:IPR001505" FT /db_xref="InterPro:IPR002429" FT /db_xref="InterPro:IPR008972" FT /db_xref="InterPro:IPR011759" FT /db_xref="InterPro:IPR014222" FT /db_xref="InterPro:IPR034210" FT /db_xref="InterPro:IPR036257" FT /db_xref="UniProtKB/TrEMBL:U5Z487" FT /protein_id="AOD41876.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8295..8364 FT /product="tRNA-Lys" FT gene 8366..8572 FT /gene="ATP8" FT CDS 8366..8572 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /db_xref="GOA:A0A1B2VWW7" FT /db_xref="InterPro:IPR001421" FT /db_xref="InterPro:IPR039017" FT /db_xref="UniProtKB/TrEMBL:A0A1B2VWW7" FT /protein_id="AOD41877.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSLKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8527..9207 FT /gene="ATP6" FT CDS 8527..9207 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B1D3" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B1D3" FT /protein_id="AOD41878.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMTMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9207..9990 FT /gene="COX3" FT CDS 9207..9990 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9990,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q4GV60" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q4GV60" FT /protein_id="AOD41879.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVTTGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9991..10058 FT /product="tRNA-Gly" FT gene 10059..10404 FT /gene="ND3" FT CDS 10059..10404 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10404,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXZ5" FT /db_xref="InterPro:IPR000440" FT /db_xref="InterPro:IPR038430" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ5" FT /protein_id="AOD41880.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWTE" FT tRNA 10405..10469 FT /product="tRNA-Arg" FT gene 10470..10766 FT /gene="ND4L" FT CDS 10470..10766 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AOD41881.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10760..12137 FT /gene="ND4" FT CDS 10760..12137 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12137,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:H9EC08" FT /db_xref="InterPro:IPR000260" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="InterPro:IPR010227" FT /db_xref="UniProtKB/TrEMBL:H9EC08" FT /protein_id="AOD41882.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12138..12206 FT /product="tRNA-His" FT tRNA 12207..12265 FT /product="tRNA-Ser" FT /note="codons recognized: AGY" FT tRNA 12266..12336 FT /product="tRNA-Leu" FT /note="codons recognized: CUN" FT gene 12337..14148 FT /gene="ND5" FT CDS 12337..14148 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:U5ZC31" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:U5ZC31" FT /protein_id="AOD41883.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPASPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14149..14673) FT /gene="ND6" FT CDS complement(14149..14673) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /db_xref="GOA:U5Z977" FT /db_xref="InterPro:IPR001457" FT /db_xref="UniProtKB/TrEMBL:U5Z977" FT /protein_id="AOD41884.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14674..14742) FT /product="tRNA-Glu" FT gene 14747..15887 FT /gene="CYTB" FT CDS 14747..15887 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15887,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q6VLV1" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q6VLV1" FT /protein_id="AOD41885.1" FT /translation="MTPMRKTNPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15888..15953 FT /product="tRNA-Thr" FT tRNA complement(15955..16023) FT /product="tRNA-Pro" XX SQ Sequence 16569 BP; 5118 A; 5184 C; 2174 G; 4093 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtatgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgcctcatc ctattattta tcgcacctac gttcaatatt 180 acaggcgaac atacttacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattgaat gtctgcacag ccgctttcca cacagacatc ataacaaaaa atttccacca 300 aacccccccc tccccccgct tctggccaca gcacttaaac acatctctgc caaaccccaa 360 aaacaaagaa ccctaacacc agcctaacca gatttcaaat tttatctttt ggcggtatgc 420 acttttaaca gtcacccccc aactaacaca ttattttccc tcccactccc atactactaa 480 tctcatcaat acaacccccg cccatcctac ccagcacaca cacaccgctg ctaaccccat 540 accccgaacc aaccaaaccc caaagacacc ccccacagtt tatgtagctt acctcctcaa 600 agcaatacac tgaaaatgtt tagacgggct cacatcaccc cataaacaaa taggtttggt 660 cctagccttt ctattagctc ttagtaagat tacacatgca agcatccccg ttccagtgag 720 ttcaccctct aaatcaccac gatcaaaagg gacaagcatc aagcacgcag caatgcagct 780 caaaacgctt agcctagcca cacccccacg ggaaacagca gtgattaacc tttagcaata 840 aacgaaagtt taactaagct atactaaccc cagggttggt caatttcgtg ccagccaccg 900 cggtcacacg attaacccaa gtcaatagaa gccggcgtaa agagtgtttt agatcacccc 960 ctccccaata aagctaaaac tcacctgagt tgtaaaaaac tccagttgac acaaaataga 1020 ctacgaaagt ggctttaaca tatctgaaca cacaatagct aagacccaaa ctgggattag 1080 ataccccact atgcttagcc ctaaacctca acagttaaat caacaaaact gctcgccaga 1140 acactacgag ccacagctta aaactcaaag gacctggcgg tgcttcatat ccctctagag 1200 gagcctgttc tgtaatcgat aaaccccgat caacctcacc acctcttgct cagcctatat 1260 accgccatct tcagcaaacc ctgatgaagg ctacaaagta agcgcaagta cccacgtaaa 1320 gacgttaggt caaggtgtag cccatgaggt ggcaagaaat gggctacatt ttctacccca 1380 gaaaactacg atagccctta tgaaacttaa gggtcgaagg tggatttagc agtaaactga 1440 gagtagagtg cttagttgaa cagggccctg aagcgcgtac acaccgcccg tcaccctcct 1500 caagtatact tcaaaggaca tttaactaaa acccctacgc atttatatag aggagacaag 1560 tcgtaacatg gtaagtgtac tggaaagtgc acttggacga accagagtgt agcttaacac 1620 aaagcaccca acttacactt aggagatttc aacttaactt gaccgctctg agctaaacct 1680 agccccaaac ccactccacc ttactaccag acaaccttag ccaaaccatt tacccaaata 1740 aagtataggc gatagaaatt gaaacctggc gcaatagata tagtaccgca agggaaagat 1800 gaaaaattat aaccaagcat aatatagcaa ggactaaccc ctataccttc tgcataatga 1860 attaactaga aataactttg caaggagagc caaagctaag acccccgaaa ccagacgagc 1920 tacctaagaa cagctaaaag agcacacccg tctatgtagc aaaatagtgg gaagatttat 1980 aggtagaggc gacaaaccta ccgagcctgg tgatagctgg ttgtccaaga tagaatctta 2040 gttcaacttt aaatttgccc acagaaccct ctaaatcccc ttgtaaattt aactgttagt 2100 ccaaagagga acagctcttt ggacactagg aaaaaacctt gtagagagag taaaaaattt 2160 aacacccata gtaggcctaa aagcagccac caattaagaa agcgttcaag ctcaacaccc 2220 actacctaaa aaatcccaaa catataactg aactcctcac acccaattgg accaatctat 2280 caccctatag aagaactaat gttagtataa gtaacatgaa aacattctcc tccgcataag 2340 cctgcgtcag attaaaacac tgaactgaca attaacagcc caatatctac aatcaaccaa 2400 caagtcatta ttaccctcac tgtcaaccca acacaggcat gctcataagg aaaggttaaa 2460 aaaagtaaaa ggaactcggc aaatcttacc ccgcctgttt accaaaaaca tcacctctag 2520 catcaccagt attagaggca ccgcctgccc agtgacacat gtttaacggc cgcggtaccc 2580 taaccgtgca aaggtagcat aatcacttgt tccttaaata gggacctgta tgaatggctc 2640 cacgagggtt cagctgtctc ttacttttaa ccagtgaaat tgacctgccc gtgaagaggc 2700 gggcataaca cagcaagacg agaagaccct atggagcttt aatttattaa tgcaaacagt 2760 acctaacaaa cccacaggtc ctaaactacc aaacctgcat taaaaatttc ggttggggcg 2820 acctcggagc agaacccaac ctccgagcag tacatgctaa gacttcacca gtcaaagcga 2880 actactatac tcaattgatc caataacttg accaacggaa caagttaccc tagggataac 2940 agcgcaatcc tattctagag tccatatcaa caatagggtt tacgacctcg atgttggatc 3000 aggacatccc gatggtgcag ccgctattaa aggttcgttt gttcaacgat taaagtccta 3060 cgtgatctga gttcagaccg gagtaatcca ggtcggtttc tatctacttc aaattcctcc 3120 ctgtacgaaa ggacaagaga aataaggcct acttcacaaa gcgccttccc ccgtaaatga 3180 tatcatctca acttagtatt atacccacac ccacccaaga acagggtttg ttaagatggc 3240 agagcccggt aatcgcataa aacttaaaac tttacagtca gaggttcaat tcctcttctt 3300 aacaacatac ccatggccaa cctcctactc ctcattgtac ccattctaat cgcaatggca 3360 ttcctaatgc ttaccgaacg aaaaattcta ggctatatac aactacgcaa aggccccaac 3420 gttgtaggcc cctacgggct actacaaccc ttcgctgacg ccataaaact cttcaccaaa 3480 gagcccctaa aacccgccac atctaccatc accctctaca tcaccgcccc gaccttagct 3540 ctcaccatcg ctcttctact atgaaccccc ctccccatac ccaaccccct ggtcaacctc 3600 aacctaggcc tcctatttat tctagccacc tctagcctag ccgtttactc aatcctctga 3660 tcagggtgag catcaaactc aaactacgcc ctgatcggcg cactgcgagc agtagcccaa 3720 acaatctcat atgaagtcac cctagccatc attctactat caacattact aataagtggc 3780 tcctttaacc tctccaccct tatcacaaca caagaacacc tctgattact cctgccatca 3840 tgacccttgg ccataatatg atttatctcc acactagcag agaccaaccg aacccccttc 3900 gaccttgccg aaggggagtc cgaactagtc tcaggcttca acatcgaata cgccgcaggc 3960 cccttcgccc tattcttcat agccgaatac acaaacatta ttataataaa caccctcacc 4020 actacaatct tcctaggaac aacatatgac gcactctccc ctgaactcta cacaacatat 4080 tttgtcacca agaccctact tctaacctcc ctgttcttat gaattcgaac agcatacccc 4140 cgattccgct acgaccaact catacacctc ctatgaaaaa acttcctacc actcacccta 4200 gcattactta tatgatatgt ctccataccc attacaatct ccagcattcc ccctcaaacc 4260 taagaaatat gtctgataaa agagttactt tgatagagta aataatagga gcttaaaccc 4320 ccttatttct aggactatga gaatcgaacc catccctgag aatccaaaat tctccgtgcc 4380 acctatcaca ccccatccta aagtaaggtc agctaaataa gctatcgggc ccataccccg 4440 aaaatgttgg ttataccctt cccgtactaa ttaatcccct ggcccaaccc gtcatctact 4500 ctaccatctt tgcaggcaca ctcatcacag cgctaagctc gcactgattt tttacctgag 4560 taggcctaga aataaacatg ctagctttta ttccagttct aaccaaaaaa ataaaccctc 4620 gttccacaga agctgccatc aagtatttcc tcacgcaagc aaccgcatcc ataatccttc 4680 taatagctat cctcttcaac aatatactct ccggacaatg aaccataacc aatactacca 4740 atcaatactc atcattaata atcataatgg ctatagcaat aaaactagga atagccccct 4800 ttcacttctg agtcccagag gttacccaag gcacccctct gacatccggc ctgcttcttc 4860 tcacatgaca aaaactagcc cccatctcaa tcatatacca aatctctccc tcactaaacg 4920 taagccttct cctcactctc tcaatcttat ccatcatagc aggcagttga ggtggattaa 4980 accaaaccca gctacgcaaa atcttagcat actcctcaat tacccacata ggatgaataa 5040 tagcagttct accgtacaac cctaacataa ccattcttaa tttaactatt tatattatcc 5100 taactactac cgcattccta ctactcaact taaactccag caccacgacc ctactactat 5160 ctcgcacctg aaacaagcta acatgactaa cacccttaat tccatccacc ctcctctccc 5220 taggaggcct gcccccgcta accggctttt tgcccaaatg ggccattatc gaagaattca 5280 caaaaaacaa tagcctcatc atccccacca tcatagccac catcaccctc cttaacctct 5340 acttctacct acgcctaatc tactccacct caatcacact actccccata tctaacaacg 5400 taaaaataaa atgacagttt gaacatacaa aacccacccc attcctcccc acactcatcg 5460 cccttaccac gctactccta cctatctccc cttttatact aataatctta tagaaattta 5520 ggttaaatac agaccaagag ccttcaaagc cctcagtaag ttgcaatact taatttctgt 5580 aacagctaag gactgcaaaa ccccactctg catcaactga acgcaaatca gccactttaa 5640 ttaagctaag cccttactag accaatggga cttaaaccca caaacactta gttaacagct 5700 aagcacccta atcaactggc ttcaatctac ttctcccgcc gccgggaaaa aaggcgggag 5760 aagccccggc aggtttgaag ctgcttcttc gaatttgcaa ttcaatatga aaatcacctc 5820 ggagctggta aaaagaggcc taacccctgt ctttagattt acagtccaat gcttcactca 5880 gccattttac ctcaccccca ctgatgttcg ccgaccgttg actattctct acaaaccaca 5940 aagacattgg aacactatac ctattattcg gcgcatgagc tggagtccta ggcacagctc 6000 taagcctcct tattcgagcc gagctgggcc agccaggcaa ccttctaggt aacgaccaca 6060 tctacaacgt tatcgtcaca gcccatgcat ttgtaataat cttcttcata gtaataccca 6120 tcataatcgg aggctttggc aactgactag ttcccctaat aatcggtgcc cccgatatgg 6180 cgtttccccg cataaacaac ataagcttct gactcttacc tccctctctc ctactcctgc 6240 tcgcatctgc tatagtggag gccggagcag gaacaggttg aacagtctac cctcccttag 6300 cagggaacta ctcccaccct ggagcctccg tagacctaac catcttctcc ttacacctag 6360 caggtgtctc ctctatctta ggggccatca atttcatcac aacaattatc aatataaaac 6420 cccctgccat aacccaatac caaacgcccc tcttcgtctg atccgtccta atcacagcag 6480 tcctacttct cctatctctc ccagtcctag ctgctggcat cactatacta ctaacagacc 6540 gcaacctcaa caccaccttc ttcgaccccg ccggaggagg agaccccatt ctataccaac 6600 acctattctg atttttcggt caccctgaag tttatattct tatcctacca ggcttcggaa 6660 taatctccca tattgtaact tactactccg gaaaaaaaga accatttgga tacataggta 6720 tggtctgagc tatgatatca attggcttcc tagggtttat cgtgtgagca caccatatat 6780 ttacagtagg aatagacgta gacacacgag catatttcac ctccgctacc ataatcatcg 6840 ctatccccac cggcgtcaaa gtatttagct gactcgccac actccacgga agcaatatga 6900 aatgatctgc tgcagtgctc tgagccctag gattcatctt tcttttcacc gtaggtggcc 6960 tgactggcat tgtattagca aactcatcac tagacatcgt actacacgac acgtactacg 7020 ttgtagccca cttccactat gtcctatcaa taggagctgt atttgccatc ataggaggct 7080 tcattcactg atttccccta ttctcaggct acaccctaga ccaaacctac gccaaaatcc 7140 atttcactat catattcatc ggcgtaaatc taactttctt cccacaacac tttctcggcc 7200 tatccggaat gccccgacgt tactcggact accccgatgc atacaccaca tgaaacatcc 7260 tatcatctgt aggctcattc atttctctaa cagcagtaat attaataatt ttcatgattt 7320 gagaagcctt cgcttcgaag cgaaaagtcc taatagtaga agaaccctcc ataaacctgg 7380 agtgactata tggatgcccc ccaccctacc acacattcga agaacccgta tacataaaat 7440 ctagacaaaa aaggaaggaa tcgaaccccc caaagctggt ttcaagccaa ccccatggcc 7500 tccatgactt tttcaaaaag gtattagaaa aaccatttca taactttgtc aaagttaaat 7560 tataggctaa atcctatata tcttaatggc acatgcagcg caagtaggtc tacaagacgc 7620 tacttcccct atcatagaag agcttatcac ctttcatgat cacgccctca taatcatttt 7680 ccttatctgc ttcctagtcc tgtatgccct tttcctaaca ctcacaacaa aactaactaa 7740 tactaacatc tcagacgctc aggaaataga aaccgtctga actatcctgc ccgccatcat 7800 cctagtcctc atcgccctcc catccctacg catcctttac ataacagacg aggtcaacga 7860 tccctccctt accatcaaat caattggcca ccaatggtac tgaacctacg agtacaccga 7920 ctacggcgga ctaatcttca actcctacat acttccccca ttattcctag aaccaggcga 7980 cctgcgactc cttgacgttg acaatcgagt agtactcccg attgaagccc ccattcgtat 8040 aataattaca tcacaagacg tcttgcactc atgagctgtc cccacattag gcttaaaaac 8100 agatgcaatt cccggacgtc taaaccaaac cactttcacc gctacacgac cgggggtata 8160 ctacggtcaa tgctctgaaa tctgtggagc aaaccacagt ttcatgccca tcgtcctaga 8220 attaattccc ctaaaaatct ttgaaatagg gcccgtattt accctatagc accccctcta 8280 ccccctctag agcccactgt aaagctaact tagcattaac cttttaagtt aaagattaag 8340 agaaccaaca cctctttaca gtgaaatgcc ccaactaaat actaccgtat ggcccaccat 8400 aattaccccc atactcctta cactattcct catcacccaa ctaaaaatat taaacacaaa 8460 ctaccaccta cctccctcac taaagcccat aaaaataaaa aattataaca aaccctgaga 8520 accaaaatga acgaaaatct gttcgcttca ttcattgccc ccacaatcct aggcctaccc 8580 gccgcagtac tgatcattct atttccccct ctattgatcc ccacctccaa atatctcatc 8640 aacaaccgac taatcaccac ccaacaatga ctaatcaaac taacctcaaa acaaatgata 8700 accatacaca acactaaagg acgaacctga tctcttatac tagtatcctt aatcattttt 8760 attgccacaa ctaacctcct cggactcctg cctcactcat ttacaccaac cacccaacta 8820 tctataaacc tagccatggc catcccctta tgagcgggcg cagtgattat aggctttcgc 8880 tctaagatta aaaatgccct agcccacttc ttaccacaag gcacacctac accccttatc 8940 cccatactag ttattatcga aaccatcagc ctactcattc aaccaatagc cctggccgta 9000 cgcctaaccg ctaacattac tgcaggccac ctactcatgc acctaattgg aagcgccacc 9060 ctagcaatat caaccattaa ccttccctct acacttatca tcttcacaat tctaattcta 9120 ctgactatcc tagaaatcgc tgtcgcctta atccaagcct acgttttcac acttctagta 9180 agcctctacc tgcacgacaa cacataatga cccaccaatc acatgcctat catatagtaa 9240 aacccagccc atgaccccta acaggggccc tctcagccct cctaatgacc tccggcctag 9300 ccatgtgatt tcacttccac tccataacgc tcctcatact aggcctacta accaacacac 9360 taaccatata ccaatgatgg cgcgatgtaa cacgagaaag cacataccaa ggccaccaca 9420 caccacctgt ccaaaaaggc cttcgatacg ggataatcct atttattacc tcagaagttt 9480 ttttcttcgc aggatttttc tgagcctttt accactccag cctagcccct accccccaat 9540 taggagggca ctggccccca acaggcatca ccccgctaaa tcccctagaa gtcccactcc 9600 taaacacatc cgtattactc gcatcaggag tatcaatcac ctgagctcac catagtctaa 9660 tagaaaacaa ccgaaaccaa ataattcaag cactgcttat tacaatttta ctgggtctct 9720 attttaccct cctacaagcc tcagagtact tcgagtctcc cttcaccatt tccgacggca 9780 tctacggctc aacatttttt gtaaccacag gcttccacgg acttcacgtc attattggct 9840 caactttcct cactatctgc ttcatccgcc aactaatatt tcactttaca tccaaacatc 9900 actttggctt cgaagccgcc gcctgatact ggcattttgt agatgtggtt tgactatttc 9960 tgtatgtctc catctattga tgagggtctt actcttttag tataaatagt accgttaact 10020 tccaattaac tagttttgac aacattcaaa aaagagtaat aaacttcgcc ttaattttaa 10080 taatcaacac cctcctagcc ttactactaa taattattac attttgacta ccacaactca 10140 acggctacat agaaaaatcc accccttacg agtgcggctt cgaccctata tcccccgccc 10200 gcgtcccttt ctccataaaa ttcttcttag tagctattac cttcttatta tttgatctag 10260 aaatcgccct ccttttaccc ctaccatgag ccctacaaac aactaacctg ccactaatag 10320 ttatgtcatc cctcttatta atcatcatcc tagccctaag tctggcctat gagtgactac 10380 aaaaaggatt agactgaacc gaattggtat atagtttaaa caaaacgaat gatttcgact 10440 cattaaatta tgataatcat atttaccaaa tgcccctcat ttacataaat attatactag 10500 catttaccat ctcacttcta ggaatactag tatatcgctc acacctcata tcctccctac 10560 tatgcctaga aggaataata ctatcgctgt tcattatagc tactctcata accctcaaca 10620 cccactccct cttagccaat attgtgccta ttgccatact agtctttgcc gcctgcgaag 10680 cagcggtggg cctagcccta ctagtctcaa tctccaacac atatggccta gactacgtac 10740 ataacctaaa cctactccaa tgctaaaact aatcgtccca acaattatat tactaccact 10800 gacatgactt tccaaaaaac acataatttg aatcaacaca accacccaca gcctaattat 10860 tagcatcatc cctctactat tttttaacca aatcaacaac aacctattta gctgttcccc 10920 aaccttttcc tccgaccccc taacaacccc cctcctaata ctaactacct gactcctacc 10980 cctcacaatc atggcaagcc aacgccactt atccagtgaa ccactatcac gaaaaaaact 11040 ctacctctct atactaatct ccctacaaat ctccttaatt ataacattca cagccacaga 11100 actaatcata ttttatatct tcttcgaaac cacacttatc cccaccttgg ctatcatcac 11160 ccgatgaggc aaccagccag aacgcctgaa cgcaggcaca tacttcctat tctacaccct 11220 agtaggctcc cttcccctac tcatcgcact aatttacact cacaacaccc taggctcact 11280 aaacattcta ctactcactc tcactgccca agaactatca aactcctgag ccaacaactt 11340 aatatgacta gcttacacaa tagcttttat agtaaagata cctctttacg gactccactt 11400 atgactccct aaagcccatg tcgaagcccc catcgctggg tcaatagtac ttgccgcagt 11460 actcttaaaa ctaggcggct atggtataat acgcctcaca ctcattctca accccctgac 11520 aaaacacata gcctacccct tccttgtact atccctatga ggcataatta taacaagctc 11580 catctgccta cgacaaacag acctaaaatc gctcattgca tactcttcaa tcagccacat 11640 agccctcgta gtaacagcca ttctcatcca aaccccctga agcttcaccg gcgcagtcat 11700 tctcataatc gcccacgggc ttacatcctc attactattc tgcctagcaa actcaaacta 11760 cgaacgcact cacagtcgca tcataatcct ctctcaagga cttcaaactc tactcccact 11820 aatagctttt tgatgacttc tagcaagcct cgctaacctc gccttacccc ccactattaa 11880 cctactggga gaactctctg tgctagtaac cacgttctcc tgatcaaata tcactctcct 11940 acttacagga ctcaacatac tagtcacagc cctatactcc ctctacatat ttaccacaac 12000 acaatggggc tcactcaccc accacattaa caacataaaa ccctcattca cacgagaaaa 12060 caccctcatg ttcatacacc tatcccccat tctcctccta tccctcaacc ccgacatcat 12120 taccgggttt tcctcttgta aatatagttt aaccaaaaca tcagattgtg aatctgacaa 12180 cagaggctta cgacccctta tttaccgaga aagctcacaa gaactgctaa ctcatgcccc 12240 catgtctaac aacatggctt tctcaacttt taaaggataa cagctatcca ttggtcttag 12300 gccccaaaaa ttttggtgca actccaaata aaagtaataa ccatgcacac tactataacc 12360 accctaaccc tgacttccct aattcccccc atccttacca ccctcgttaa ccctaacaaa 12420 aaaaactcat acccccatta tgtaaaatcc attgtcgcat ccacctttat tatcagtctc 12480 ttccccacaa caatattcat gtgcctagac caagaagtta ttatctcgaa ctgacactga 12540 gccacaaccc aaacaaccca gctctcccta agcttcaaac tagactactt ctccataata 12600 ttcatccctg tagcattgtt cgttacatgg tccatcatag aattctcact gtgatatata 12660 aactcagacc caaacattaa tcagttcttc aaatatctac tcatcttcct aattaccata 12720 ctaatcttag ttaccgctaa caacctattc caactgttca tcggctgaga gggcgtagga 12780 attatatcct tcttgctcat cagttgatga tacgcccgag cagatgccaa cacagcagcc 12840 attcaagcaa tcctatacaa ccgtatcggc gatatcggtt tcatcctcgc cttagcatga 12900 tttatcctac actccaactc atgagaccca caacaaatag cccttctaaa cgctaatcca 12960 agcctcaccc cactactagg cctcctccta gcagcagcag gcaaatcagc ccaattaggt 13020 ctccacccct gactcccctc agccatagaa ggccccaccc cagtctcagc cctactccac 13080 tcaagcacta tagttgtagc aggaatcttc ttactcatcc gcttccaccc cctagcagaa 13140 aatagcccac taatccaaac tctaacacta tgcttaggcg ctatcaccac tctgttcgca 13200 gcagtctgcg cccttacaca aaatgacatc aaaaaaatcg tagccttctc cacttcaagt 13260 caactaggac tcataatagt tacaatcggc atcaaccaac cacacctagc attcctgcac 13320 atctgtaccc acgccttctt caaagccata ctatttatgt gctccgggtc catcatccac 13380 aaccttaaca atgaacaaga tattcgaaaa ataggaggac tactcaaaac catacctctc 13440 acttcaacct ccctcaccat tggcagccta gcattagcag gaataccttt cctcacaggt 13500 ttctactcca aagaccacat catcgaaacc gcaaacatat catacacaaa cgcctgagcc 13560 ctatctatta ctctcatcgc tacctccctg acaagcgcct atagcactcg aataattctt 13620 ctcaccctaa caggtcaacc tcgcttcccc acccttacta acattaacga aaataacccc 13680 accctactaa accccattaa acgcctggca gccggaagcc tattcgcagg atttctcatt 13740 actaacaaca tttcccccgc atcccccttc caaacaacaa tccccctcta cctaaaactc 13800 acagccctcg ctgtcacttt cctaggactt ctaacagccc tagacctcaa ctacctaacc 13860 aacaaactta aaataaaatc cccactatgc acattttatt tctccaacat actcggattc 13920 taccctagca tcacacaccg cacaatcccc tatctaggcc ttcttacgag ccaaaacctg 13980 cccctactcc tcctagacct aacctgacta gaaaagctat tacctaaaac aatttcacag 14040 caccaaatct ccacctccat catcacctca acccaaaaag gcataattaa actttacttc 14100 ctctctttct tcttcccact catcctaacc ctactcctaa tcacataacc tattcccccg 14160 agcaatctca attacaatat atacaccaac aaacaatgtt caaccagtaa ctactactaa 14220 tcaacgccca taatcataca aagcccccgc accaatagga tcctcccgaa tcaaccctga 14280 cccctctcct tcataaatta ttcagcttcc tacactatta aagtttacca caaccaccac 14340 cccatcatac tctttcaccc acagcaccaa tcctacctcc atcgctaacc ccactaaaac 14400 actcaccaag acctcaaccc ctgaccccca tgcctcagga tactcctcaa tagccatcgc 14460 tgtagtatat ccaaagacaa ccatcattcc ccctaaataa attaaaaaaa ctattaaacc 14520 catataacct cccccaaaat tcagaataat aacacacccg accacaccgc taacaatcaa 14580 tactaaaccc ccataaatag gagaaggctt agaagaaaac cccacaaacc ccattactaa 14640 acccacactc aacagaaaca aagcatacat cattattctc gcacggacta caaccacgac 14700 caatgatatg aaaaaccatc gttgtatttc aactacaaga acaccaatga ccccaatacg 14760 caaaactaac cccctaataa aattaattaa ccactcattc atcgacctcc ccaccccatc 14820 caacatctcc gcatgatgaa acttcggctc actccttggc gcctgcctga tcctccaaat 14880 caccacagga ctattcctag ccatgcacta ctcaccagac gcctcaaccg ccttttcatc 14940 aatcgcccac atcactcgag acgtaaatta tggctgaatc atccgctacc ttcacgccaa 15000 tggcgcctca atattcttta tctgcctctt cctacacatc gggcgaggcc tatattacgg 15060 atcatttctc tactcagaaa cctgaaacat cggcattatc ctcctgcttg caactatagc 15120 aacagccttc ataggctatg tcctcccgtg aggccaaata tcattctgag gggccacagt 15180 aattacaaac ttactatccg ccatcccata cattgggaca gacctagttc aatgaatctg 15240 aggaggctac tcagtagaca gtcccaccct cacacgattc tttacctttc acttcatctt 15300 gcccttcatt attgcagccc tagcagcact ccacctccta ttcttgcacg aaacgggatc 15360 aaacaacccc ctaggaatca cctcccattc cgataaaatc accttccacc cttactacac 15420 aatcaaagac gccctcggct tacttctctt ccttctctcc ttaatgacat taacactatt 15480 ctcaccagac ctcctaggcg acccagacaa ttatacccta gccaacccct taaacacccc 15540 tccccacatc aagcccgaat gatatttcct attcgcctac acaattctcc gatccgtccc 15600 taacaaacta ggaggcgtcc ttgccctatt actatccatc ctcatcctag caataatccc 15660 catcctccat atatccaaac aacaaagcat aatatttcgc ccactaagcc aatcacttta 15720 ttgactccta gccgcagacc tcctcattct aacctgaatc ggaggacaac cagtaagcta 15780 cccttttacc atcattggac aagtagcatc cgtactatac ttcacaacaa tcctaatcct 15840 aataccaact atctccctaa ttgaaaacaa aatactcaaa tgggcctgtc cttgtagtat 15900 aaactaatac accagtcttg taaaccggag atgaaaacct ttttccaagg acaaatcaga 15960 gaaaaagtct ttaactccac cattagcacc caaagctaag attctaattt aaactattct 16020 ctgttctttc atggggaagc agatttgggt accacccaag tattgactca cccatcaaca 16080 accgctatgt atttcgtaca ttactgccag ccaccatgaa tattgtacgg taccataaat 16140 acttgaccac ctgtagtaca taaaaaccca atccacatca aaaccccctc cccatgctta 16200 caagcaagta cagcaatcaa ccctcaacta tcacacatca cctgcaactc caaagccacc 16260 cctcacccac taggatacca acaaacctac ccacccttaa cagcacatag tacataaagc 16320 catttaccgt acatagcaca ttacagtcaa atcccttctc gtccccatgg atgacccccc 16380 tcagataggg gtcccttgac caccatcctc cgtgaaatca atatcccgca caagagtgct 16440 actctcctcg ctccgggccc ataacacttg ggggtagcta aagtgaactg tatccgacat 16500 ctggttccta cttcagggtc ataaagccta aatagcccac acgttcccct taaataagac 16560 atcacgatg 16569 // ID KX702186; SV 1; circular; genomic DNA; STD; HUM; 16570 BP. XX AC KX702186; XX DT 24-AUG-2016 (Rel. 129, Created) DT 24-AUG-2016 (Rel. 129, Last updated, Version 1) XX DE Homo sapiens haplogroup H29 mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16570 RA Greenspan B.; RT ; RL Submitted (12-AUG-2016) to the INSDC. RL Family Tree DNA - Genealogy by Genetics, Ltd., 1445 North Loop West, Suite RL 820, Houston, TX 77008, USA XX DR MD5; 80226ebaf1246f6f8263a0eebed4eb22. DR Ensembl-Gn; ENSG00000198695; homo_sapiens. DR Ensembl-Gn; ENSG00000198712; homo_sapiens. DR Ensembl-Gn; ENSG00000198763; homo_sapiens. DR Ensembl-Gn; ENSG00000198786; homo_sapiens. DR Ensembl-Gn; ENSG00000198804; homo_sapiens. DR Ensembl-Gn; ENSG00000198840; homo_sapiens. DR Ensembl-Gn; ENSG00000198886; homo_sapiens. DR Ensembl-Gn; ENSG00000198888; homo_sapiens. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Gn; ENSG00000228253; homo_sapiens. DR Ensembl-Tr; ENST00000361227; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000361381; homo_sapiens. DR Ensembl-Tr; ENST00000361390; homo_sapiens. DR Ensembl-Tr; ENST00000361453; homo_sapiens. DR Ensembl-Tr; ENST00000361567; homo_sapiens. DR Ensembl-Tr; ENST00000361624; homo_sapiens. DR Ensembl-Tr; ENST00000361681; homo_sapiens. DR Ensembl-Tr; ENST00000361739; homo_sapiens. DR Ensembl-Tr; ENST00000361851; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX FH Key Location/Qualifiers FH FT source 1..16570 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="FTDNA 307165" FT /mol_type="genomic DNA" FT /note="ethnicity:Armenian; origin_locality:Turkey: FT Parchentz" FT /db_xref="taxon:9606" FT /haplogroup="H29" FT D-loop complement(join(16029..16570,1..579)) FT tRNA 579..649 FT /product="tRNA-Phe" FT rRNA 650..1603 FT /product="12S ribosomal RNA" FT tRNA 1604..1672 FT /product="tRNA-Val" FT rRNA 1673..3230 FT /product="16S ribosomal RNA" FT tRNA 3231..3305 FT /product="tRNA-Leu" FT /note="codons recognized: UUR" FT gene 3308..4263 FT /gene="ND1" FT CDS 3308..4263 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4262..4263,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:U5Z754" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:U5Z754" FT /protein_id="AOD41886.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPITISSIPPQT" FT tRNA 4264..4332 FT /product="tRNA-Ile" FT tRNA complement(4330..4401) FT /product="tRNA-Gln" FT tRNA 4403..4470 FT /product="tRNA-Met" FT gene 4471..5512 FT /gene="ND2" FT CDS 4471..5512 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5512,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXY9" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q7GXY9" FT /protein_id="AOD41887.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPFLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5513..5580 FT /product="tRNA-Trp" FT tRNA complement(5588..5656) FT /product="tRNA-Ala" FT tRNA complement(5658..5730) FT /product="tRNA-Asn" FT tRNA complement(5762..5827) FT /product="tRNA-Cys" FT tRNA complement(5827..5892) FT /product="tRNA-Tyr" FT gene 5905..7446 FT /gene="COX1" FT CDS 5905..7446 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:U5YWV7" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:U5YWV7" FT /protein_id="AOD41888.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7446..7517) FT /product="tRNA-Ser" FT /note="codons recognized: UCN" FT tRNA 7519..7586 FT /product="tRNA-Asp" FT gene 7587..8270 FT /gene="COX2" FT CDS 7587..8270 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /db_xref="GOA:U5Z487" FT /db_xref="InterPro:IPR001505" FT /db_xref="InterPro:IPR002429" FT /db_xref="InterPro:IPR008972" FT /db_xref="InterPro:IPR011759" FT /db_xref="InterPro:IPR014222" FT /db_xref="InterPro:IPR034210" FT /db_xref="InterPro:IPR036257" FT /db_xref="UniProtKB/TrEMBL:U5Z487" FT /protein_id="AOD41889.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8296..8365 FT /product="tRNA-Lys" FT gene 8367..8573 FT /gene="ATP8" FT CDS 8367..8573 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /db_xref="GOA:U5YV54" FT /db_xref="InterPro:IPR001421" FT /db_xref="InterPro:IPR039017" FT /db_xref="UniProtKB/TrEMBL:U5YV54" FT /protein_id="AOD41890.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8528..9208 FT /gene="ATP6" FT CDS 8528..9208 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B1D3" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B1D3" FT /protein_id="AOD41891.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMTMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9208..9991 FT /gene="COX3" FT CDS 9208..9991 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9991,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AOD41892.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9992..10059 FT /product="tRNA-Gly" FT gene 10060..10405 FT /gene="ND3" FT CDS 10060..10405 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10405,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXZ5" FT /db_xref="InterPro:IPR000440" FT /db_xref="InterPro:IPR038430" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ5" FT /protein_id="AOD41893.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWTE" FT tRNA 10406..10470 FT /product="tRNA-Arg" FT gene 10471..10767 FT /gene="ND4L" FT CDS 10471..10767 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AOD41894.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10761..12138 FT /gene="ND4" FT CDS 10761..12138 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12138,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:H9EC08" FT /db_xref="InterPro:IPR000260" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="InterPro:IPR010227" FT /db_xref="UniProtKB/TrEMBL:H9EC08" FT /protein_id="AOD41895.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12139..12207 FT /product="tRNA-His" FT tRNA 12208..12266 FT /product="tRNA-Ser" FT /note="codons recognized: AGY" FT tRNA 12267..12337 FT /product="tRNA-Leu" FT /note="codons recognized: CUN" FT gene 12338..14149 FT /gene="ND5" FT CDS 12338..14149 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:U5ZC31" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:U5ZC31" FT /protein_id="AOD41896.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPASPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14150..14674) FT /gene="ND6" FT CDS complement(14150..14674) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /db_xref="GOA:U5Z977" FT /db_xref="InterPro:IPR001457" FT /db_xref="UniProtKB/TrEMBL:U5Z977" FT /protein_id="AOD41897.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14675..14743) FT /product="tRNA-Glu" FT gene 14748..15888 FT /gene="CYTB" FT CDS 14748..15888 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15888,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q6VLV1" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q6VLV1" FT /protein_id="AOD41898.1" FT /translation="MTPMRKTNPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15889..15954 FT /product="tRNA-Thr" FT tRNA complement(15956..16024) FT /product="tRNA-Pro" XX SQ Sequence 16570 BP; 5116 A; 5183 C; 2176 G; 4095 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtatgcacgc gatagcattg cgggacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgcctcatc ctattattta tcgcacctac gttcaatatt 180 acaggcgaac atacttacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattgaat gtctgcacag ccgctttcca cacagacatc ataacaaaaa atttccacca 300 aaccccccct cccccccgct tctggccaca gcacttaaac acatctctgc caaaccccaa 360 aaacaaagaa ccctaacacc agcctaacca gatttcaaat tttatctttt ggcggtatgc 420 acttttaaca gtcacccccc aactaacaca ttattttccc ctcccactcc catactacta 480 atctcatcaa tacaaccccc gcccatccta cccagcacac acaccgctgc taaccccata 540 ccccgaacca accaaacccc aaagacaccc cccccacagt ttatgtagct tacctcctca 600 aagcaataca ctgaaaatgt ttagacgggc tcacatcacc ccataaacaa ataggtttgg 660 tcctagcctt tctattagct cttagtaaga ttacacatgc aagcatcccc gttccagtga 720 gttcaccctc taaatcacca cgatcaaaag ggacaagcat caagcacgca gcaatgcagc 780 tcaaaacgct tagcctagcc acacccccac gggaaacagc agtgattaac ctttagcaat 840 aaacgaaagt ttaactaagc tatactaacc ccagggttgg tcaatttcgt gccagccacc 900 gcggtcacac gattaaccca agtcaataga agccggcgta aagagtgttt tagatcaccc 960 cctccccaat aaagctaaaa ctcacctgag ttgtaaaaaa ctccagttga cacaaaatag 1020 actacgaaag tggctttaac atatctgaac acacaatagc taagacccaa actgggatta 1080 gataccccac tatgcttagc cctaaacctc aacagttaaa tcaacaaaac tgctcgccag 1140 aacactacga gccacagctt aaaactcaaa ggacctggcg gtgcttcata tccctctaga 1200 ggagcctgtt ctgtaatcga taaaccccga tcaacctcac cacctcttgc tcagcctata 1260 taccgccatc ttcagcaaac cctgatgaag gctacaaagt aagcgcaagt acccacgtaa 1320 agacgttagg tcaaggtgta gcccatgagg tggcaagaaa tgggctacat tttctacccc 1380 agaaaactac gatagccctt atgaaactta agggtcgaag gtggatttag cagtaaactg 1440 agagtagagt gcttagttga acagggccct gaagcgcgta cacaccgccc gtcaccctcc 1500 tcaagtatac ttcaaaggac atttaactaa aacccctacg catttatata gaggagacaa 1560 gtcgtaacat ggtaagtgta ctggaaagtg cacttggacg aaccagagtg tagcttaaca 1620 caaagcaccc aacttacact taggagattt caacttaact tgaccgctct gagctaaacc 1680 tagccccaaa cccactccac cttactacca gacaacctta gccaaaccat ttacccaaat 1740 aaagtatagg cgatagaaat tgaaacctgg cgcaatagat atagtaccgc aagggaaaga 1800 tgaaaaatta taaccaagca taatatagca aggactaacc cctatacctt ctgcataatg 1860 aattaactag aaataacttt gcaaggagag ccaaagctaa gacccccgaa accagacgag 1920 ctacctaaga acagctaaaa gagcacaccc gtctatgtag caaaatagtg ggaagattta 1980 taggtagagg cgacaaacct accgagcctg gtgatagctg gttgtccaag atagaatctt 2040 agttcaactt taaatttgcc cacagaaccc tctaaatccc cttgtaaatt taactgttag 2100 tccaaagagg aacagctctt tggacactag gaaaaaacct tgtagagaga gtaaaaaatt 2160 taacacccat agtaggccta aaagcagcca ccaattaaga aagcgttcaa gctcaacacc 2220 cactacctaa aaaatcccaa acatataact gaactcctca cacccaattg gaccaatcta 2280 tcaccctata gaagaactaa tgttagtata agtaacatga aaacattctc ctccgcataa 2340 gcctgcgtca gattaaaaca ctgaactgac aattaacagc ccaatatcta caatcaacca 2400 acaagtcatt attaccctca ctgtcaaccc aacacaggca tgctcataag gaaaggttaa 2460 aaaaagtaaa aggaactcgg caaatcttac cccgcctgtt taccaaaaac atcacctcta 2520 gcatcaccag tattagaggc accgcctgcc cagtgacaca tgtttaacgg ccgcggtacc 2580 ctaaccgtgc aaaggtagca taatcacttg ttccttaaat agggacctgt atgaatggct 2640 ccacgagggt tcagctgtct cttactttta accagtgaaa ttgacctgcc cgtgaagagg 2700 cgggcataac acagcaagac gagaagaccc tatggagctt taatttatta atgcaaacag 2760 tacctaacaa acccacaggt cctaaactac caaacctgca ttaaaaattt cggttggggc 2820 gacctcggag cagaacccaa cctccgagca gtacatgcta agacttcacc agtcaaagcg 2880 aactactata ctcaattgat ccaataactt gaccaacgga acaagttacc ctagggataa 2940 cagcgcaatc ctattctaga gtccatatca acaatagggt ttacgacctc gatgttggat 3000 caggacatcc cgatggtgca gccgctatta aaggttcgtt tgttcaacga ttaaagtcct 3060 acgtgatctg agttcagacc ggagtaatcc aggtcggttt ctatctactt caaattcctc 3120 cctgtacgaa aggacaagag aaataaggcc tacttcacaa agcgccttcc cccgtaaatg 3180 atatcatctc aacttagtat tatacccaca cccacccaag aacagggttt gttaagatgg 3240 cagagcccgg taatcgcata aaacttaaaa ctttacagtc agaggttcaa ttcctcttct 3300 taacaacata cccatggcca acctcctact cctcattgta cccattctaa tcgcaatggc 3360 attcctaatg cttaccgaac gaaaaattct aggctatata caactacgca aaggccccaa 3420 cgttgtaggc ccctacgggc tactacaacc cttcgctgac gccataaaac tcttcaccaa 3480 agagccccta aaacccgcca catctaccat caccctctac atcaccgccc cgaccttagc 3540 tctcaccatc gctcttctac tatgaacccc cctccccata cccaaccccc tggtcaacct 3600 caacctaggc ctcctattta ttctagccac ctctagccta gccgtttact caatcctctg 3660 atcagggtga gcatcaaact caaactacgc cctgatcggc gcactgcgag cagtagccca 3720 aacaatctca tatgaagtca ccctagccat cattctacta tcaacattac taataagtgg 3780 ctcctttaac ctctccaccc ttatcacaac acaagaacac ctctgattac tcctgccatc 3840 atgacccttg gccataatat gatttatctc cacactagca gagaccaacc gaaccccctt 3900 cgaccttgcc gaaggggagt ccgaactagt ctcaggcttc aacatcgaat acgccgcagg 3960 ccccttcgcc ctattcttca tagccgaata cacaaacatt attataataa acaccctcac 4020 cactacaatc ttcctaggaa caacatatga cgcactctcc cctgaactct acacaacata 4080 ttttgtcacc aagaccctac ttctaacctc cctgttctta tgaattcgaa cagcataccc 4140 ccgattccgc tacgaccaac tcatacacct cctatgaaaa aacttcctac cactcaccct 4200 agcattactt atatgatatg tctccatacc cattacaatc tccagcattc cccctcaaac 4260 ctaagaaata tgtctgataa aagagttact ttgatagagt aaataatagg agcttaaacc 4320 cccttatttc taggactatg agaatcgaac ccatccctga gaatccaaaa ttctccgtgc 4380 cacctatcac accccatcct aaagtaaggt cagctaaata agctatcggg cccatacccc 4440 gaaaatgttg gttataccct tcccgtacta attaatcccc tggcccaacc cgtcatctac 4500 tctaccatct ttgcaggcac actcatcaca gcgctaagct cgcactgatt ttttacctga 4560 gtaggcctag aaataaacat gctagctttt attccagttc taaccaaaaa aataaaccct 4620 cgttccacag aagctgccat caagtatttc ctcacgcaag caaccgcatc cataatcctt 4680 ctaatagcta tcctcttcaa caatatactc tccggacaat gaaccataac caatactacc 4740 aatcaatact catcattaat aatcataatg gctatagcaa taaaactagg aatagccccc 4800 tttcacttct gagtcccaga ggttacccaa ggcacccctc tgacatccgg cctgcttctt 4860 ctcacatgac aaaaactagc ccccatctca atcatatacc aaatctctcc ctcactaaac 4920 gtaagccttc tcctcactct ctcaatctta tccatcatag caggcagttg aggtggatta 4980 aaccaaaccc agctacgcaa aatcttagca tactcctcaa ttacccacat aggatgaata 5040 atagcagttc taccgtacaa ccctaacata accattctta atttaactat ttatattatc 5100 ctaactacta ccgcattcct actactcaac ttaaactcca gcaccacgac cctactacta 5160 tctcgcacct gaaacaagct aacatgacta acacccttaa ttccatccac cctcctctcc 5220 ctaggaggcc tgcccccgct aaccggcttt ttgcccaaat gggccattat cgaagaattc 5280 acaaaaaaca atagcctcat catccccacc atcatagcca ccatcaccct ccttaacctc 5340 tacttctacc tacgcctaat ctactccacc tcaatcacac tactccccat atctaacaac 5400 gtaaaaataa aatgacagtt tgaacataca aaacccaccc cattcctccc cacactcatc 5460 gcccttacca cgctactcct acctatctcc ccttttatac taataatctt atagaaattt 5520 aggttaaata cagaccaaga gccttcaaag ccctcagtaa gttgcaatac ttaatttctg 5580 tagcagctaa ggactgcaaa accccactct gcatcaactg aacgcaaatc agccacttta 5640 attaagctaa gcccttacta gaccaatggg acttaaaccc acaaacactt agttaacagc 5700 taagcaccct aatcaactgg cttcaatcta cttctcccgc cgccgggaaa aaaggcggga 5760 gaagccccgg caggtttgaa gctgcttctt cgaatttgca attcaatatg aaaatcacct 5820 cggagctggt aaaaagaggc ctaacccctg tctttagatt tacagtccaa tgcttcactc 5880 agccatttta cctcaccccc actgatgttc gccgaccgtt gactattctc tacaaaccac 5940 aaagacattg gaacactata cctattattc ggcgcatgag ctggagtcct aggcacagct 6000 ctaagcctcc ttattcgagc cgagctgggc cagccaggca accttctagg taacgaccac 6060 atctacaacg ttatcgtcac agcccatgca tttgtaataa tcttcttcat agtaataccc 6120 atcataatcg gaggctttgg caactgacta gttcccctaa taatcggtgc ccccgatatg 6180 gcgtttcccc gcataaacaa cataagcttc tgactcttac ctccctctct cctactcctg 6240 ctcgcatctg ctatagtgga ggccggagca ggaacaggtt gaacagtcta ccctccctta 6300 gcagggaact actcccaccc tggagcctcc gtagacctaa ccatcttctc cttacaccta 6360 gcaggtgtct cctctatctt aggggccatc aatttcatca caacaattat caatataaaa 6420 ccccctgcca taacccaata ccaaacgccc ctcttcgtct gatccgtcct aatcacagca 6480 gtcctacttc tcctatctct cccagtccta gctgctggca tcactatact actaacagac 6540 cgcaacctca acaccacctt cttcgacccc gccggaggag gagaccccat tctataccaa 6600 cacctattct gatttttcgg tcaccctgaa gtttatattc ttatcctacc aggcttcgga 6660 ataatctccc atattgtaac ttactactcc ggaaaaaaag aaccatttgg atacataggt 6720 atggtctgag ctatgatatc aattggcttc ctagggttta tcgtgtgagc acaccatata 6780 tttacagtag gaatagacgt agacacacga gcatatttca cctccgctac cataatcatc 6840 gctatcccca ccggcgtcaa agtatttagc tgactcgcca cactccacgg aagcaatatg 6900 aaatgatctg ctgcagtgct ctgagcccta ggattcatct ttcttttcac cgtaggtggc 6960 ctgactggca ttgtattagc aaactcatca ctagacatcg tactacacga cacgtactac 7020 gttgtagccc acttccacta tgtcctatca ataggagctg tatttgccat cataggaggc 7080 ttcattcact gatttcccct attctcaggc tacaccctag accaaaccta cgccaaaatc 7140 catttcacta tcatattcat cggcgtaaat ctaactttct tcccacaaca ctttctcggc 7200 ctatccggaa tgccccgacg ttactcggac taccccgatg catacaccac atgaaacatc 7260 ctatcatctg taggctcatt catttctcta acagcagtaa tattaataat tttcatgatt 7320 tgagaagcct tcgcttcgaa gcgaaaagtc ctaatagtag aagaaccctc cataaacctg 7380 gagtgactat atggatgccc cccaccctac cacacattcg aagaacccgt atacataaaa 7440 tctagacaaa aaaggaagga atcgaacccc ccaaagctgg tttcaagcca accccatggc 7500 ctccatgact ttttcaaaaa ggtattagaa aaaccatttc ataactttgt caaagttaaa 7560 ttataggcta aatcctatat atcttaatgg cacatgcagc gcaagtaggt ctacaagacg 7620 ctacttcccc tatcatagaa gagcttatca cctttcatga tcacgccctc ataatcattt 7680 tccttatctg cttcctagtc ctgtatgccc ttttcctaac actcacaaca aaactaacta 7740 atactaacat ctcagacgct caggaaatag aaaccgtctg aactatcctg cccgccatca 7800 tcctagtcct catcgccctc ccatccctac gcatccttta cataacagac gaggtcaacg 7860 atccctccct taccatcaaa tcaattggcc accaatggta ctgaacctac gagtacaccg 7920 actacggcgg actaatcttc aactcctaca tacttccccc attattccta gaaccaggcg 7980 acctgcgact ccttgacgtt gacaatcgag tagtactccc gattgaagcc cccattcgta 8040 taataattac atcacaagac gtcttgcact catgagctgt ccccacatta ggcttaaaaa 8100 cagatgcaat tcccggacgt ctaaaccaaa ccactttcac cgctacacga ccgggggtat 8160 actacggtca atgctctgaa atctgtggag caaaccacag tttcatgccc atcgtcctag 8220 aattaattcc cctaaaaatc tttgaaatag ggcccgtatt taccctatag caccccctct 8280 accccctcta gagcccactg taaagctaac ttagcattaa ccttttaagt taaagattaa 8340 gagaaccaac acctctttac agtgaaatgc cccaactaaa tactaccgta tggcccacca 8400 taattacccc catactcctt acactattcc tcatcaccca actaaaaata ttaaacacaa 8460 actaccacct acctccctca ccaaagccca taaaaataaa aaattataac aaaccctgag 8520 aaccaaaatg aacgaaaatc tgttcgcttc attcattgcc cccacaatcc taggcctacc 8580 cgccgcagta ctgatcattc tatttccccc tctattgatc cccacctcca aatatctcat 8640 caacaaccga ctaatcacca cccaacaatg actaatcaaa ctaacctcaa aacaaatgat 8700 aaccatacac aacactaaag gacgaacctg atctcttata ctagtatcct taatcatttt 8760 tattgccaca actaacctcc tcggactcct gcctcactca tttacaccaa ccacccaact 8820 atctataaac ctagccatgg ccatcccctt atgagcgggc gcagtgatta taggctttcg 8880 ctctaagatt aaaaatgccc tagcccactt cttaccacaa ggcacaccta caccccttat 8940 ccccatacta gttattatcg aaaccatcag cctactcatt caaccaatag ccctggccgt 9000 acgcctaacc gctaacatta ctgcaggcca cctactcatg cacctaattg gaagcgccac 9060 cctagcaata tcaaccatta accttccctc tacacttatc atcttcacaa ttctaattct 9120 actgactatc ctagaaatcg ctgtcgcctt aatccaagcc tacgttttca cacttctagt 9180 aagcctctac ctgcacgaca acacataatg acccaccaat cacatgccta tcatatagta 9240 aaacccagcc catgacccct aacaggggcc ctctcagccc tcctaatgac ctccggccta 9300 gccatgtgat ttcacttcca ctccataacg ctcctcatac taggcctact aaccaacaca 9360 ctaaccatat accaatgatg gcgcgatgta acacgagaaa gcacatacca aggccaccac 9420 acaccacctg tccaaaaagg ccttcgatac gggataatcc tatttattac ctcagaagtt 9480 tttttcttcg caggattttt ctgagccttt taccactcca gcctagcccc taccccccaa 9540 ttaggagggc actggccccc aacaggcatc accccgctaa atcccctaga agtcccactc 9600 ctaaacacat ccgtattact cgcatcagga gtatcaatca cctgagctca ccatagtcta 9660 atagaaaaca accgaaacca aataattcaa gcactgctta ttacaatttt actgggtctc 9720 tattttaccc tcctacaagc ctcagagtac ttcgagtctc ccttcaccat ttccgacggc 9780 atctacggct caacattttt tgtagccaca ggcttccacg gacttcacgt cattattggc 9840 tcaactttcc tcactatctg cttcatccgc caactaatat ttcactttac atccaaacat 9900 cactttggct tcgaagccgc cgcctgatac tggcattttg tagatgtggt ttgactattt 9960 ctgtatgtct ccatctattg atgagggtct tactctttta gtataaatag taccgttaac 10020 ttccaattaa ctagttttga caacattcaa aaaagagtaa taaacttcgc cttaatttta 10080 ataatcaaca ccctcctagc cttactacta ataattatta cattttgact accacaactc 10140 aacggctaca tagaaaaatc caccccttac gagtgcggct tcgaccctat atcccccgcc 10200 cgcgtccctt tctccataaa attcttctta gtagctatta ccttcttatt atttgatcta 10260 gaaattgccc tccttttacc cctaccatga gccctacaaa caactaacct gccactaata 10320 gttatgtcat ccctcttatt aatcatcatc ctagccctaa gtctggccta tgagtgacta 10380 caaaaaggat tagactgaac tgaattggta tatagtttaa acaaaacgaa tgatttcgac 10440 tcattaaatt atgataatca tatttaccaa atgcccctca tttacataaa tattatacta 10500 gcatttacca tctcacttct aggaatacta gtatatcgct cacacctcat atcctcccta 10560 ctatgcctag aaggaataat actatcgctg ttcattatag ctactctcat aaccctcaac 10620 acccactccc tcttagccaa tattgtgcct attgccatac tagtctttgc cgcctgcgaa 10680 gcagcggtgg gcctagccct actagtctca atctccaaca catatggcct agactacgta 10740 cataacctaa acctactcca atgctaaaac taatcgtccc aacaattata ttactaccac 10800 tgacatgact ttccaaaaaa cacataattt gaatcaacac aaccacccac agcctaatta 10860 ttagcatcat ccctctacta ttttttaacc aaatcaacaa caacctattt agctgttccc 10920 caaccttttc ctccgacccc ctaacaaccc ccctcctaat actaactacc tgactcctac 10980 ccctcacaat catggcaagc caacgccact tatccagtga accactatca cgaaaaaaac 11040 tctacctctc tatactaatc tccctacaaa tctccttaat tataacattc acagccacag 11100 aactaatcat attttatatc ttcttcgaaa ccacacttat ccccaccttg gctatcatca 11160 cccgatgagg caaccagcca gaacgcctga acgcaggcac atacttccta ttctacaccc 11220 tagtaggctc ccttccccta ctcatcgcac taatttacac tcacaacacc ctaggctcac 11280 taaacattct actactcact ctcactgccc aagaactatc aaactcctga gccaacaact 11340 taatatgact agcttacaca atagctttta tagtaaagat acctctttac ggactccact 11400 tatgactccc taaagcccat gtcgaagccc ccatcgctgg gtcaatagta cttgccgcag 11460 tactcttaaa actaggcggc tatggtataa tacgcctcac actcattctc aaccccctga 11520 caaaacacat agcctacccc ttccttgtac tatccctatg aggcataatt ataacaagct 11580 ccatctgcct acgacaaaca gacctaaaat cgctcattgc atactcttca atcagccaca 11640 tagccctcgt agtaacagcc attctcatcc aaaccccctg aagcttcacc ggcgcagtca 11700 ttctcataat cgcccacggg cttacatcct cattactatt ctgcctagca aactcaaact 11760 acgaacgcac tcacagtcgc atcataatcc tctctcaagg acttcaaact ctactcccac 11820 taatagcttt ttgatgactt ctagcaagcc tcgctaacct cgccttaccc cccactatta 11880 acctactggg agaactctct gtgctagtaa ccacattctc ctgatcaaat atcactctcc 11940 tacttacagg actcaacata ctagtcacag ccctatactc cctctacata tttaccacaa 12000 cacaatgggg ctcactcacc caccacatta acaacataaa accctcattc acacgagaaa 12060 acaccctcat gttcatacac ctatccccca ttctcctcct atccctcaac cccgacatca 12120 ttaccgggtt ttcttcttgt aaatatagtt taaccaaaac atcagattgt gaatctgaca 12180 acagaggctt acgacccctt atttaccgag aaagctcaca agaactgcta actcatgccc 12240 ccatgtctaa caacatggct ttctcaactt ttaaaggata acagctatcc attggtctta 12300 ggccccaaaa attttggtgc aactccaaat aaaagtaata accatgcaca ctactataac 12360 caccctaacc ctgacttccc taattccccc catccttacc accctcgtta accctaacaa 12420 aaaaaactca tacccccatt atgtaaaatc cattgtcgca tccaccttta ttatcagtct 12480 cttccccaca acaatattca tgtgcctaga ccaagaagtt attatctcga actgacactg 12540 agccacaacc caaacaaccc agctctccct aagcttcaaa ctagactact tctccataat 12600 attcatccct gtagcattgt tcgttacatg gtccatcata gaattctcac tgtgatatat 12660 aaactcagac ccaaacatta atcagttctt caaatatcta ctcatcttcc taattaccat 12720 actaatctta gttaccgcta acaacctatt ccaactgttc atcggctgag agggcgtagg 12780 aattatatcc ttcttgctca tcagttgatg atacgcccga gcagatgcca acacagcagc 12840 cattcaagca atcctataca accgtatcgg cgatatcggt ttcatcctcg ccttagcatg 12900 atttatccta cactccaact catgagaccc acaacaaata gcccttctaa acgctaatcc 12960 aagcctcacc ccactactag gcctcctcct agcagcagca ggcaaatcag cccaattagg 13020 tctccacccc tgactcccct cagccataga aggccccacc ccagtctcag ccctactcca 13080 ctcaagcact atagttgtag caggaatctt cttactcatc cgcttccacc ccctagcaga 13140 aaatagccca ctaatccaaa ctctaacact atgcttaggc gctatcacca ctctgttcgc 13200 agcagtctgc gcccttacac aaaatgacat caaaaaaatc gtagccttct ccacttcaag 13260 tcaactagga ctcataatag ttacaatcgg catcaaccaa ccacacctag cattcctgca 13320 catctgtacc cacgccttct tcaaagccat actatttatg tgctccgggt ccatcatcca 13380 caaccttaac aatgaacaag atattcgaaa aataggagga ctactcaaaa ccatacctct 13440 cacttcaacc tccctcacca ttggcagcct agcattagca ggaatacctt tcctcacagg 13500 tttctactcc aaagaccaca tcatcgaaac cgcaaacata tcatacacaa acgcctgagc 13560 cctatctatt actctcatcg ctacctccct gacaagcgcc tatagcactc gaataattct 13620 tctcacccta acaggtcaac ctcgcttccc cacccttact aacattaacg aaaataaccc 13680 caccctacta aaccccatta aacgcctggc agccggaagc ctattcgcag gatttctcat 13740 tactaacaac atttcccccg catccccctt ccaaacaaca atccccctct acctaaaact 13800 cacagccctc gctgtcactt tcctaggact tctaacagcc ctagacctca actacctaac 13860 caacaaactt aaaataaaat ccccactatg cacattttat ttctccaaca tactcggatt 13920 ctaccctagc atcacacacc gcacaatccc ctatctaggc cttcttacga gccaaaacct 13980 gcccctactc ctcctagacc taacctgact agaaaagcta ttacctaaaa caatttcaca 14040 gcaccaaatc tccacctcca tcatcacctc aacccaaaaa ggcataatta aactttactt 14100 cctctctttc ttcttcccgc tcatcctaac cctactccta atcacataac ctattccccc 14160 gagcaatctc aattacaata tatacaccaa caaacaatgt tcaaccagta actactacta 14220 atcaacgccc ataatcatac aaagcccccg caccaatagg atcctcccga atcaaccctg 14280 acccctctcc ttcataaatt attcagcttc ctacactatt aaagtttacc acaaccacca 14340 ccccatcata ctctttcacc cacagcacca atcctacctc catcgctaac cccactaaaa 14400 cactcaccaa gacctcaacc cctgaccccc atgcctcagg atactcctca atagccatcg 14460 ctgtagtata tccaaagaca accatcattc cccctaaata aattaaaaaa actattaaac 14520 ccatataacc tcccccaaaa ttcagaataa taacacaccc gaccacaccg ctaacaatca 14580 atactaaacc cccataaata ggagaaggct tagaagaaaa ccccacaaac cccattacta 14640 aacccacact caacagaaac aaagcataca tcattattct cgcacggact acaaccacga 14700 ccaatgatat gaaaaaccat cgttgtattt caactacaag aacaccaatg accccaatac 14760 gcaaaactaa ccccctaata aaattaatta accactcatt catcgacctc cccaccccat 14820 ccaacatctc cgcatgatga aacttcggct cactccttgg cgcctgcctg atcctccaaa 14880 tcaccacagg actattccta gccatgcact actcaccaga cgcctcaacc gccttttcat 14940 caatcgccca catcactcga gacgtaaatt atggctgaat catccgctac cttcacgcca 15000 atggcgcctc aatattcttt atctgcctct tcctacacat cgggcgaggc ctatattacg 15060 gatcatttct ctactcagaa acctgaaaca tcggcattat cctcctgctt gcaactatag 15120 caacagcctt cataggctat gtcctcccgt gaggccaaat atcattctga ggggccacag 15180 taattacaaa cttactatcc gccatcccat acattgggac agacctagtt caatgaatct 15240 gaggaggcta ctcagtagac agtcccaccc tcacacgatt ctttaccttt cacttcatct 15300 tgcccttcat tattgcagcc ctagcagcac tccacctcct attcttgcac gaaacgggat 15360 caaacaaccc cctaggaatc acctcccatt ccgataaaat caccttccac ccttactaca 15420 caatcaaaga cgccctcggc ttacttctct tccttctctc cttaatgaca ttaacactat 15480 tctcaccaga cctcctaggc gacccagaca attataccct agccaacccc ttaaacaccc 15540 ctccccacat caagcccgaa tgatatttcc tattcgccta cacaattctc cgatccgtcc 15600 ctaacaaact aggaggcgtc cttgccctat tactatccat cctcatccta gcaataatcc 15660 ccatcctcca tatatccaaa caacaaagca taatatttcg cccactaagc caatcacttt 15720 attgactcct agccgcagac ctcctcattc taacctgaat cggaggacaa ccagtaagct 15780 acccttttac catcattgga caagtagcat ccgtactata cttcacaaca atcctaatcc 15840 taataccaac tatctcccta attgaaaaca aaatactcaa atgggcctgt ccttgtagta 15900 taaactaata caccagtctt gtaaaccgga aatgaaaacc tttttccaag gacaaatcag 15960 agaaaaagtc tttaactcca ccattagcac ccaaagctaa gattctaatt taaactattc 16020 tctgttcttt catggggaag cagatttggg taccacccaa gtattgactc acccatcaac 16080 aaccgctatg tatttcgtac attactgcca gccaccatga atattgtacg gtaccataaa 16140 tacttgacca cctgtagtac ataaaaaccc aatccacatc aaaaccccct ccccatgctt 16200 acaagcaagt acagcaatca accctcaact atcacacatc aactgcaact ccaaagccac 16260 ccctcaccca ctaggatacc aacaaaccta cccaccctta acagtacata gtacataaag 16320 ccatttaccg tacatagcac attacagtca aatcccttct cgtccccatg gatgaccccc 16380 ctcagatagg ggtcccttga ccaccatcct ccgtgaaatc aatatcccgc acaagagtgc 16440 tactctcctc gctccgggcc cataacactt gggggtagct aaagtgaact gtatccgaca 16500 tctggttcct acttcagggc cataaagcct aaatagccca cacgttcccc ttaaataaga 16560 catcacgatg 16570 // ID KX702187; SV 1; circular; genomic DNA; STD; HUM; 16571 BP. XX AC KX702187; XX DT 24-AUG-2016 (Rel. 129, Created) DT 24-AUG-2016 (Rel. 129, Last updated, Version 1) XX DE Homo sapiens haplogroup H13a1-T152C mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16571 RA Greenspan B.; RT ; RL Submitted (12-AUG-2016) to the INSDC. RL Family Tree DNA - Genealogy by Genetics, Ltd., 1445 North Loop West, Suite RL 820, Houston, TX 77008, USA XX DR MD5; 4daf16e9a8cc6a4056b64eec756fb357. DR Ensembl-Gn; ENSG00000198695; homo_sapiens. DR Ensembl-Gn; ENSG00000198712; homo_sapiens. DR Ensembl-Gn; ENSG00000198763; homo_sapiens. DR Ensembl-Gn; ENSG00000198786; homo_sapiens. DR Ensembl-Gn; ENSG00000198804; homo_sapiens. DR Ensembl-Gn; ENSG00000198840; homo_sapiens. DR Ensembl-Gn; ENSG00000198886; homo_sapiens. DR Ensembl-Gn; ENSG00000198888; homo_sapiens. DR Ensembl-Gn; ENSG00000198938; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Gn; ENSG00000228253; homo_sapiens. DR Ensembl-Tr; ENST00000361227; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000361381; homo_sapiens. DR Ensembl-Tr; ENST00000361390; homo_sapiens. DR Ensembl-Tr; ENST00000361453; homo_sapiens. DR Ensembl-Tr; ENST00000361567; homo_sapiens. DR Ensembl-Tr; ENST00000361624; homo_sapiens. DR Ensembl-Tr; ENST00000361681; homo_sapiens. DR Ensembl-Tr; ENST00000361739; homo_sapiens. DR Ensembl-Tr; ENST00000361851; homo_sapiens. DR Ensembl-Tr; ENST00000362079; homo_sapiens. XX FH Key Location/Qualifiers FH FT source 1..16571 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="FTDNA 302194" FT /mol_type="genomic DNA" FT /note="ethnicity:Armenian; origin_locality:Iran: Shiraz" FT /db_xref="taxon:9606" FT /haplogroup="H13a1-T152C" FT D-loop complement(join(16030..16571,1..580)) FT tRNA 580..650 FT /product="tRNA-Phe" FT rRNA 651..1604 FT /product="12S ribosomal RNA" FT tRNA 1605..1673 FT /product="tRNA-Val" FT rRNA 1674..3231 FT /product="16S ribosomal RNA" FT tRNA 3232..3306 FT /product="tRNA-Leu" FT /note="codons recognized: UUR" FT gene 3309..4264 FT /gene="ND1" FT CDS 3309..4264 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4263..4264,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:U5Z754" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:U5Z754" FT /protein_id="AOD41860.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWYVSMPITISSIPPQT" FT tRNA 4265..4333 FT /product="tRNA-Ile" FT tRNA complement(4331..4402) FT /product="tRNA-Gln" FT tRNA 4404..4471 FT /product="tRNA-Met" FT gene 4472..5513 FT /gene="ND2" FT CDS 4472..5513 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5513,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXY9" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q7GXY9" FT /protein_id="AOD41861.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPFLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5514..5581 FT /product="tRNA-Trp" FT tRNA complement(5589..5657) FT /product="tRNA-Ala" FT tRNA complement(5659..5731) FT /product="tRNA-Asn" FT tRNA complement(5763..5828) FT /product="tRNA-Cys" FT tRNA complement(5828..5893) FT /product="tRNA-Tyr" FT gene 5906..7447 FT /gene="COX1" FT CDS 5906..7447 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:U5YWV7" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:U5YWV7" FT /protein_id="AOD41862.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7447..7518) FT /product="tRNA-Ser" FT /note="codons recognized: UCN" FT tRNA 7520..7587 FT /product="tRNA-Asp" FT gene 7588..8271 FT /gene="COX2" FT CDS 7588..8271 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /db_xref="GOA:U5Z487" FT /db_xref="InterPro:IPR001505" FT /db_xref="InterPro:IPR002429" FT /db_xref="InterPro:IPR008972" FT /db_xref="InterPro:IPR011759" FT /db_xref="InterPro:IPR014222" FT /db_xref="InterPro:IPR034210" FT /db_xref="InterPro:IPR036257" FT /db_xref="UniProtKB/TrEMBL:U5Z487" FT /protein_id="AOD41863.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8297..8366 FT /product="tRNA-Lys" FT gene 8368..8574 FT /gene="ATP8" FT CDS 8368..8574 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /db_xref="GOA:U5YV54" FT /db_xref="InterPro:IPR001421" FT /db_xref="InterPro:IPR039017" FT /db_xref="UniProtKB/TrEMBL:U5YV54" FT /protein_id="AOD41864.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8529..9209 FT /gene="ATP6" FT CDS 8529..9209 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B1D3" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B1D3" FT /protein_id="AOD41865.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMTMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9209..9992 FT /gene="COX3" FT CDS 9209..9992 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9992,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GIM7" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:Q7GIM7" FT /protein_id="AOD41866.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9993..10060 FT /product="tRNA-Gly" FT gene 10061..10406 FT /gene="ND3" FT CDS 10061..10406 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10406,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXZ5" FT /db_xref="InterPro:IPR000440" FT /db_xref="InterPro:IPR038430" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ5" FT /protein_id="AOD41867.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWTE" FT tRNA 10407..10471 FT /product="tRNA-Arg" FT gene 10472..10768 FT /gene="ND4L" FT CDS 10472..10768 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AOD41868.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10762..12139 FT /gene="ND4" FT CDS 10762..12139 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12139,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:H9EC08" FT /db_xref="InterPro:IPR000260" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="InterPro:IPR010227" FT /db_xref="UniProtKB/TrEMBL:H9EC08" FT /protein_id="AOD41869.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12140..12208 FT /product="tRNA-His" FT tRNA 12209..12267 FT /product="tRNA-Ser" FT /note="codons recognized: AGY" FT tRNA 12268..12338 FT /product="tRNA-Leu" FT /note="codons recognized: CUN" FT gene 12339..14150 FT /gene="ND5" FT CDS 12339..14150 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:U5ZC31" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:U5ZC31" FT /protein_id="AOD41870.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPASPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSII FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14151..14675) FT /gene="ND6" FT CDS complement(14151..14675) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /db_xref="GOA:U5Z977" FT /db_xref="InterPro:IPR001457" FT /db_xref="UniProtKB/TrEMBL:U5Z977" FT /protein_id="AOD41871.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14676..14744) FT /product="tRNA-Glu" FT gene 14749..15889 FT /gene="CYTB" FT CDS 14749..15889 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15889,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q6VLV1" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q6VLV1" FT /protein_id="AOD41872.1" FT /translation="MTPMRKTNPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15890..15955 FT /product="tRNA-Thr" FT tRNA complement(15957..16025) FT /product="tRNA-Pro" XX SQ Sequence 16571 BP; 5116 A; 5185 C; 2177 G; 4093 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtatgcacgc gatagcattg cgggacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgcctcatc ccattattta tcgcacctac gttcaatatt 180 acaggcgaac atacttacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattgaat gtctgcacag ccgctttcca cacagacatc ataacaaaaa atttccacca 300 aacccccccc ctccccccgc ttctggccac agcacttaaa cacatctctg ccaaacccca 360 aaaacaaaga accctaacac cagcctaacc agatttcaaa ttttatcttt tggcggtatg 420 cacttttaac agtcaccccc caactaacac attattttcc cctcccactc ccatactact 480 aatctcatca atacaacccc cgcccatcct acccagcaca cacacaccgc tgctaacccc 540 ataccccgaa ccaaccaaac cccaaagaca ccccccacag tttatgtagc ttacctcctc 600 aaagcaatac actgaaaatg tttagacggg ctcacatcac cccataaaca aataggtttg 660 gtcctagcct ttctattagc tcttagtaag attacacatg caagcatccc cgttccagtg 720 agttcaccct ctaaatcacc acgatcaaaa gggacaagca tcaagcacgc agcaatgcag 780 ctcaaaacgc ttagcctagc cacaccccca cgggaaacag cagtgattaa cctttagcaa 840 taaacgaaag tttaactaag ctatactaac cccagggttg gtcaatttcg tgccagccac 900 cgcggtcaca cgattaaccc aagtcaatag aagccggcgt aaagagtgtt ttagatcacc 960 ccctccccaa taaagctaaa actcacctga gttgtaaaaa actccagttg acacaaaata 1020 gactacgaaa gtggctttaa catatctgaa cacacaatag ctaagaccca aactgggatt 1080 agatacccca ctatgcttag ccctaaacct caacagttaa atcaacaaaa ctgctcgcca 1140 gaacactacg agccacagct taaaactcaa aggacctggc ggtgcttcat acccctctag 1200 aggagcctgt tctgtaatcg ataaaccccg atcaacctca ccacctcttg ctcagcctat 1260 ataccgccat cttcagcaaa ccctgatgaa ggctacaaag taagcgcaag tacccacgta 1320 aagacgttag gtcaaggtgt agcccatgag gtggcaagaa atgggctaca ttttctaccc 1380 cagaaaacta cgatagccct tatgaaactt aagggtcgaa ggtggattta gcagtaaact 1440 gagagtagag tgcttagttg aacagggccc tgaagcgcgt acacaccgcc cgtcaccctc 1500 ctcaagtata cttcaaagga catttaacta aaacccctac gcatttatat agaggagaca 1560 agtcgtaaca tggtaagtgt actggaaagt gcacttggac gaaccagagt gtagcttaac 1620 acaaagcacc caacttacac ttaggagatt tcaacttaac ttgaccgctc tgagctaaac 1680 ctagccccaa acccactcca ccttactacc agacaacctt agccaaacca tttacccaaa 1740 taaagtatag gcgatagaaa ttgaaacctg gcgcaataga tatagtaccg caagggaaag 1800 atgaaaaatt ataaccaagc ataatatagc aaggactaac ccctatacct tctgcataat 1860 gaattaacta gaaataactt tgcaaggaga gccaaagcta agacccccga aaccagacga 1920 gctacctaag aacagctaaa agagcacacc cgtctatgta gcaaaatagt gggaagattt 1980 ataggtagag gcgacaaacc taccgagcct ggtgatagct ggttgtccaa gatagaatct 2040 tagttcaact ttaaatttgc ccacagaacc ctctaaatcc ccttgtaaat ttaactgtta 2100 gtccaaagag gaacagctct ttggacacta ggaaaaaacc ttgtagagag agtaaaaaat 2160 ttaacaccca tagtaggcct aaaagcagcc accaattaag aaagcgttca agctcaacac 2220 ccactaccta aaaaatccca aacatataac tgaactcctc atacccaatt ggaccaatct 2280 atcaccctat agaagaacta atgttagtat aagtaacatg aaaacattct cctccgcata 2340 agcctgcgtc agattaaaac actgaactga caattaacag cccaatatcc acaatcaacc 2400 aacaagtcat tattaccctc actgtcaacc caacacaggc atgctcataa ggaaaggtta 2460 aaaaaagtaa aaggaactcg gcaaatctta ccccgcctgt ttaccaaaaa catcacctct 2520 agcatcacca gtattagagg caccgcctgc ccagtgacac atgtttaacg gccgcggtac 2580 cctaaccgtg caaaggtagc ataatcactt gttccttaaa tagggacctg tatgaatggc 2640 tccacgaggg ttcagctgtc tcttactttt aaccagtgaa attgacctgc ccgtgaagag 2700 gcgggcataa cacagcaaga cgagaagacc ctatggagct ttaatttatt aatgcaaaca 2760 gtacctaaca aacccacagg tcctaaacta ccaaacctgc attaaaaatt tcggttgggg 2820 cgacctcgga gcagaaccca acctccgagc agtacatgct aagacttcac cagtcaaagc 2880 gaactactat actcaattga tccaataact tgaccaacgg aacaagttac cctagggata 2940 acagcgcaat cctattctag agtccatatc aacaataggg tttacgacct cgatgttgga 3000 tcaggacatc ccgatggtgc agccgctatt aaaggttcgt ttgttcaacg attaaagtcc 3060 tacgtgatct gagttcagac cggagtaatc caggtcggtt tctatctact tcaaattcct 3120 ccctgtacga aaggacaaga gaaataaggc ctacttcaca aagcgccttc ccccgtaaat 3180 gatatcatct caacttagta ttatacccac acccacccaa gaacagggtt tgttaagatg 3240 gcagagcccg gtaatcgcat aaaacttaaa actttacagt cagaggttca attcctcttc 3300 ttaacaacat acccatggcc aacctcctac tcctcattgt acccattcta atcgcaatgg 3360 cattcctaat gcttaccgaa cgaaaaattc taggctatat acaactacgc aaaggcccca 3420 acgttgtagg cccctacggg ctactacaac ccttcgctga cgccataaaa ctcttcacca 3480 aagagcccct aaaacccgcc acatctacca tcaccctcta catcaccgcc ccgaccttag 3540 ctctcaccat cgctcttcta ctatgaaccc ccctccccat acccaacccc ctggtcaacc 3600 tcaacctagg cctcctattt attctagcca cctctagcct agccgtttac tcaatcctct 3660 gatcagggtg agcatcaaac tcaaactacg ccctgatcgg cgcactgcga gcagtagccc 3720 aaacaatctc atatgaagtc accctagcca tcattctact atcaacatta ctaataagtg 3780 gctcctttaa cctctccacc cttatcacaa cacaagaaca cctctgatta ctcctgccat 3840 catgaccctt ggccataata tgatttatct ccacactagc agagaccaac cgaaccccct 3900 tcgaccttgc cgaaggggag tccgaactag tctcaggctt caacatcgaa tacgccgcag 3960 gccccttcgc cctattcttc atagccgaat acacaaacat tattataata aacaccctca 4020 ccactacaat cttcctagga acaacatatg acgcactctc ccctgaactc tacacaacat 4080 attttgtcac caagacccta cttctaacct ccctgttctt atgaattcga acagcatacc 4140 cccgattccg ctacgaccaa ctcatacacc tcctatgaaa aaacttccta ccactcaccc 4200 tagcattact tatatgatat gtctccatac ccattacaat ctccagcatt ccccctcaaa 4260 cctaagaaat atgtctgata aaagagttac tttgatagag taaataatag gagcttaaac 4320 ccccttattt ctaggactat gagaatcgaa cccatccctg agaatccaaa attctccgtg 4380 ccacctatca caccccatcc taaagtaagg tcagctaaat aagctatcgg gcccataccc 4440 cgaaaatgtt ggttataccc ttcccgtact aattaatccc ctggcccaac ccgtcatcta 4500 ctctaccatc tttgcaggca cactcatcac agcgctaagc tcgcactgat tttttacctg 4560 agtaggccta gaaataaaca tgctagcttt tattccagtt ctaaccaaaa aaataaaccc 4620 tcgttccaca gaagctgcca tcaagtattt cctcacgcaa gcaaccgcat ccataatcct 4680 tctaatagct atcctcttca acaatatact ctccggacaa tgaaccataa ccaatactac 4740 caatcagtac tcatcattaa taatcataat ggctatagca ataaaactag gaatagcccc 4800 ctttcacttc tgagtcccag aggttaccca aggcacccct ctgacatccg gcctgcttct 4860 tctcacatga caaaaactag cccccatctc aatcatatac caaatctctc cctcactaaa 4920 cgtaagcctt ctcctcactc tctcaatctt atccatcata gcaggcagtt gaggtggatt 4980 aaaccaaacc cagctacgca aaatcttagc atactcctca attacccaca taggatgaat 5040 aatagcagtt ctaccgtaca accctaacat aaccattctt aatttaacta tttatattat 5100 cctaactact accgcattcc tactactcaa cttaaactcc agcaccacga ccctactact 5160 atctcgcacc tgaaacaagc taacatgact aacaccctta attccatcca ccctcctctc 5220 cctaggaggc ctgcccccgc taaccggctt tttgcccaaa tgggccatta tcgaagaatt 5280 cacaaaaaac aatagcctca tcatccccac catcatagcc accatcaccc tccttaacct 5340 ctacttctac ctacgcctaa tctactccac ctcaatcaca ctactcccca tatctaacaa 5400 cgtaaaaata aaatgacagt ttgaacatac aaaacccacc ccattcctcc ccacactcat 5460 cgcccttacc acgctactcc tacctatctc cccttttata ctaataatct tatagaaatt 5520 taggttaaat acagaccaag agccttcaaa gccctcagta agttgcaata cttaatttct 5580 gtaacagcta aggactgcaa aaccccactc tgcatcaact gaacgcaaat cagccacttt 5640 aattaagcta agcccttact agaccaatgg gacttaaacc cacaaacact tagttaacag 5700 ctaagcaccc taatcaactg gcttcaatct acttctcccg ccgccgggaa aaaaggcggg 5760 agaagccccg gcaggtttga agctgcttct tcgaatttgc aattcaatat gaaaatcacc 5820 tcggagctgg taaaaagagg cctaacccct gtctttagat ttacagtcca atgcttcact 5880 cagccatttt acctcacccc cactgatgtt cgccgaccgt tgactattct ctacaaacca 5940 caaagacatt ggaacactat acctattatt cggcgcatga gctggagtcc taggcacagc 6000 tctaagcctc cttattcgag ccgagctggg ccagccaggc aaccttctag gtaacgacca 6060 catctacaac gttatcgtca cagcccatgc atttgtaata atcttcttca tagtaatacc 6120 catcataatc ggaggctttg gcaactgact agttccccta ataatcggtg cccccgatat 6180 ggcgtttccc cgcataaaca acataagctt ctgactctta cctccctctc tcctactcct 6240 gctcgcatct gctatagtgg aggccggagc aggaacaggt tgaacagtct accctccctt 6300 agcagggaac tactcccacc ctggagcctc cgtagaccta accatcttct ccttacacct 6360 agcaggtgtc tcctctatct taggggccat caatttcatc acaacaatta tcaatataaa 6420 accccctgcc ataacccaat accaaacgcc cctcttcgtc tgatccgtcc taatcacagc 6480 agtcctactt ctcctatctc tcccagtcct agctgctggc atcactatac tactaacaga 6540 ccgcaacctc aacaccacct tcttcgaccc cgccggagga ggagacccca ttctatacca 6600 acacctattc tgatttttcg gtcaccctga agtttatatt cttatcctac caggcttcgg 6660 aataatctcc catattgtaa cttactactc cggaaaaaaa gaaccatttg gatacatagg 6720 tatggtctga gctatgatat caattggctt cctagggttt atcgtgtgag cacaccatat 6780 atttacagta ggaatagacg tagacacacg agcatatttc acctccgcta ccataatcat 6840 cgctatcccc accggcgtca aagtatttag ctgactcgcc acactccacg gaagcaatat 6900 gaaatgatct gctgcagtgc tctgagccct aggattcatc tttcttttca ccgtaggtgg 6960 cctgactggc attgtattag caaactcatc actagacatc gtactacacg acacgtacta 7020 cgttgtagcc cacttccact atgtcctatc aataggagct gtatttgcca tcataggagg 7080 cttcattcac tgatttcccc tattctcagg ctacacccta gaccaaacct acgccaaaat 7140 ccatttcact atcatattca tcggcgtaaa tctaactttc ttcccacaac actttctcgg 7200 cctatccgga atgccccgac gttactcgga ctaccccgat gcatacacca catgaaacat 7260 cctatcatct gtaggctcat tcatttctct aacagcagta atattaataa ttttcatgat 7320 ttgagaagcc ttcgcttcga agcgaaaagt cctaatagta gaagaaccct ccataaacct 7380 ggagtgacta tatggatgcc ccccacccta ccacacattc gaagaacccg tatacataaa 7440 atctagacaa aaaaggaagg aatcgaaccc cccaaagctg gtttcaagcc aaccccatgg 7500 cctccatgac tttttcaaaa aggtattaga aaaaccattt cataactttg tcaaagttaa 7560 attataggct aaatcctata tatcttaatg gcacatgcag cgcaagtagg tctacaagac 7620 gctacttccc ctatcataga agagcttatc acctttcatg atcacgccct cataatcatt 7680 ttccttatct gcttcctagt cctgtatgcc cttttcctaa cactcacaac aaaactaact 7740 aatactaaca tctcagacgc tcaggaaata gaaaccgtct gaactatcct gcccgccatc 7800 atcctagtcc tcatcgccct cccatcccta cgcatccttt acataacaga cgaggtcaac 7860 gatccctccc ttaccatcaa atcaattggc caccaatggt actgaaccta cgagtacacc 7920 gactacggcg gactaatctt caactcctac atacttcccc cattattcct agaaccaggc 7980 gacctgcgac tccttgacgt tgacaatcga gtagtactcc cgattgaagc ccccattcgt 8040 ataataatta catcacaaga cgtcttgcac tcatgagctg tccccacatt aggcttaaaa 8100 acagatgcaa ttcccggacg tctaaaccaa accactttca ccgctacacg accgggggta 8160 tactacggtc aatgctctga aatctgtgga gcaaaccaca gtttcatgcc catcgtccta 8220 gaattaattc ccctaaaaat ctttgaaata gggcccgtat ttaccctata gcaccccctc 8280 taccccctct agagcccact gtaaagctaa cttagcatta accttttaag ttaaagatta 8340 agagaaccaa cacctcttta cagtgaaatg ccccaactaa atactaccgt atggcccacc 8400 ataattaccc ccatactcct tacactattc ctcatcaccc aactaaaaat attaaacaca 8460 aactaccacc tacctccctc accaaagccc ataaaaataa aaaattataa caaaccctga 8520 gaaccaaaat gaacgaaaat ctgttcgctt cattcattgc ccccacaatc ctaggcctac 8580 ccgccgcagt actgatcatt ctatttcccc ctctattgat ccccacctcc aaatatctca 8640 tcaacaaccg actaatcacc acccaacaat gactaatcaa actaacctca aaacaaatga 8700 taaccataca caacactaaa ggacgaacct gatctcttat actagtatcc ttaatcattt 8760 ttattgccac aactaacctc ctcggactcc tgcctcactc atttacacca accacccaac 8820 tatctataaa cctagccatg gccatcccct tatgagcggg cgcagtgatt ataggctttc 8880 gctctaagat taaaaatgcc ctagcccact tcttaccaca aggcacacct acacccctta 8940 tccccatact agttattatc gaaaccatca gcctactcat tcaaccaata gccctggccg 9000 tacgcctaac cgctaacatt actgcaggcc acctactcat gcacctaatt ggaagcgcca 9060 ccctagcaat atcaaccatt aaccttccct ctacacttat catcttcaca attctaattc 9120 tactgactat cctagaaatc gctgtcgcct taatccaagc ctacgttttc acacttctag 9180 taagcctcta cctgcacgac aacacataat gacccaccaa tcacatgcct atcatatagt 9240 aaaacccagc ccatgacccc taacaggggc cctctcagcc ctcctaatga cctccggcct 9300 agccatgtga tttcacttcc actccataac gctcctcata ctaggcctac taaccaacac 9360 actaaccata taccaatgat ggcgcgatgt aacacgagaa agcacatacc aaggccacca 9420 cacaccacct gtccaaaaag gccttcgata cgggataatc ctatttatta cctcagaagt 9480 ttttttcttc gcaggatttt tctgagcctt ttaccactcc agcctagccc ctacccccca 9540 attaggaggg cactggcccc caacaggcat caccccgcta aatcccctag aagtcccact 9600 cctaaacaca tccgtattac tcgcatcagg agtatcaatc acctgagctc accatagtct 9660 aatagaaaac aaccgaaacc aaataattca agcactgctt attacaattt tactgggtct 9720 ctattttacc ctcctacaag cctcagagta cttcgagtct cccttcacca tttccgacgg 9780 catctacggc tcaacatttt ttgtagccac aggcttccac ggacttcacg tcattattgg 9840 ctcaactttc ctcactatct gcttcatccg ccaactaata tttcacttta catccaaaca 9900 tcactttggc ttcgaagccg ccgcctgata ctggcatttt gtagatgtgg tttgactatt 9960 tctgtatgtc tccatctatt gatgagggtc ttactctttt agtataaata gtaccgttaa 10020 cttccaatta actagttttg acaacattca aaaaagagta ataaacttcg ccttaatttt 10080 aataatcaac accctcctag ccttactact aataattatt acattttgac taccacaact 10140 caacggctac atagaaaaat ccacccctta cgagtgcggc ttcgacccta tatcccccgc 10200 ccgcgtccct ttctccataa aattcttctt agtagctatt accttcttat tatttgatct 10260 agaaattgcc ctccttttac ccctaccatg agccctacaa acaactaacc tgccactaat 10320 agttatgtca tccctcttat taatcatcat cctagcccta agtctggcct atgagtgact 10380 acaaaaagga ttagactgaa ccgaattggt atatagttta aacaaaacga atgatttcga 10440 ctcattaaat tatgataatc atatttacca aatgcccctc atttacataa atattatact 10500 agcatttacc atctcacttc taggaatact agtatatcgc tcacacctca tatcctccct 10560 actatgccta gaaggaataa tactatcgct gttcattata gctactctca taaccctcaa 10620 cacccactcc ctcttagcca atattgtgcc tattgccata ctagtctttg ccgcctgcga 10680 agcagcggtg ggcctagccc tactagtctc aatctccaac acatatggcc tagactacgt 10740 acataaccta aacctactcc aatgctaaaa ctaatcgtcc caacaattat attactacca 10800 ctgacatgac tttccaaaaa acacataatt tgaatcaaca caaccaccca cagcctaatt 10860 attagcatca tccctctact attttttaac caaatcaaca acaacctatt tagctgttcc 10920 ccaacctttt cctccgaccc cctaacaacc cccctcctaa tactaactac ctgactccta 10980 cccctcacaa tcatggcaag ccaacgccac ttatccagtg aaccactatc acgaaaaaaa 11040 ctctacctct ctatactaat ctccctacaa atctccttaa ttataacatt cacagccaca 11100 gaactaatca tattttatat cttcttcgaa accacactta tccccacctt ggctatcatc 11160 acccgatgag gcaaccagcc agaacgcctg aacgcaggca catacttcct attctacacc 11220 ctagtaggct cccttcccct actcatcgca ctaatttaca ctcacaacac cctaggctca 11280 ctaaacattc tactactcac tctcactgcc caagaactat caaactcctg agccaacaac 11340 ttaatatgac tagcttacac aatagctttt atagtaaaga tacctcttta cggactccac 11400 ttatgactcc ctaaagccca tgtcgaagcc cccatcgctg ggtcaatagt acttgccgca 11460 gtactcttaa aactaggcgg ctatggtata atacgcctca cactcattct caaccccctg 11520 acaaaacaca tagcctaccc cttccttgta ctatccctat gaggcataat tataacaagc 11580 tccatctgcc tacgacaaac agacctaaaa tcgctcattg catactcttc aatcagccac 11640 atagccctcg tagtaacagc cattctcatc caaaccccct gaagcttcac cggcgcagtc 11700 attctcataa tcgcccacgg gcttacatcc tcattactat tctgcctagc aaactcaaac 11760 tacgaacgca ctcacagtcg catcataatc ctctctcaag gacttcaaac tctactccca 11820 ctaatagctt tttgatgact tctagcaagc ctcgctaacc tcgccttacc ccccactatt 11880 aacctactgg gagaactctc tgtgctagta accacgttct cctgatcaaa tatcactctc 11940 ctacttacag gactcaacat actagtcaca gccctatact ccctctacat atttaccaca 12000 acacaatggg gctcactcac ccaccacatt aacaacataa aaccctcatt cacacgagaa 12060 aacaccctca tgttcataca cctatccccc attctcctcc tatccctcaa ccccgacatc 12120 attaccgggt tttcctcttg taaatatagt ttaaccaaaa catcagattg tgaatctgac 12180 aacagaggct tacgacccct tatttaccga gaaagctcac aagaactgct aactcatgcc 12240 cccatgtcta acaacatggc tttctcaact tttaaaggat aacagctatc cattggtctt 12300 aggccccaaa aattttggtg caactccaaa taaaagtaat aaccatgcac actactataa 12360 ccaccctaac cctgacttcc ctaattcccc ccatccttac caccctcgtt aaccctaaca 12420 aaaaaaactc atacccccat tatgtaaaat ccattgtcgc atccaccttt atcatcagtc 12480 tcttccccac aacaatattc atgtgcctag accaagaagt tattatctcg aactgacact 12540 gagccacaac ccaaacaacc cagctctccc taagcttcaa actagactac ttctccataa 12600 tattcatccc tgtagcattg ttcgttacat ggtccatcat agaattctca ctgtgatata 12660 taaactcaga cccaaacatt aatcagttct tcaaatatct actcatcttc ctaattacca 12720 tactaatctt agttaccgct aacaacctat tccaactgtt catcggctga gagggcgtag 12780 gaattatatc cttcttgctc atcagttgat gatacgcccg agcagatgcc aacacagcag 12840 ccattcaagc aatcctatac aaccgtatcg gcgatatcgg tttcatcctc gccttagcat 12900 gatttatcct acactccaac tcatgagacc cacaacaaat agcccttcta aacgctaatc 12960 caagcctcac cccactacta ggcctcctcc tagcagcagc aggcaaatca gcccaattag 13020 gtctccaccc ctgactcccc tcagccatag aaggccccac cccagtctca gccctactcc 13080 actcaagcac tatagttgta gcaggaatct tcttactcat ccgcttccac cccctagcag 13140 aaaatagccc actaatccaa actctaacac tatgcttagg cgctatcacc actctgttcg 13200 cagcagtctg cgcccttaca caaaatgaca tcaaaaaaat cgtagccttc tccacttcaa 13260 gtcaactagg actcataata gttacaatcg gcatcaacca accacaccta gcattcctgc 13320 acatctgtac ccacgccttc ttcaaagcca tactatttat gtgctccggg tccatcatcc 13380 acaaccttaa caatgaacaa gatattcgaa aaataggagg actactcaaa accatacctc 13440 tcacttcaac ctccctcacc attggcagcc tagcattagc aggaatacct ttcctcacag 13500 gtttctactc caaagaccac atcatcgaaa ccgcaaacat atcatacaca aacgcctgag 13560 ccctatctat tactctcatc gctacctccc tgacaagcgc ctatagcact cgaataattc 13620 ttctcaccct aacaggtcaa cctcgcttcc ccacccttac taacattaac gaaaataacc 13680 ccaccctact aaaccccatt aaacgcctgg cagccggaag cctattcgca ggatttctca 13740 ttactaacaa catttccccc gcatccccct tccaaacaac aatccccctc tacctaaaac 13800 tcacagccct cgctgtcact ttcctaggac ttctaacagc cctagacctc aactacctaa 13860 ccaacaaact taaaataaaa tccccactat gcacatttta tttctccaac atactcggat 13920 tctaccctag catcacacac cgcacaatcc cctatctagg ccttcttacg agccaaaacc 13980 tgcccctact cctcctagac ctaacctgac tagaaaagct attacctaaa acaatttcac 14040 agcaccaaat ctccacctcc atcatcacct caacccaaaa aggcataatt aaactttact 14100 tcctctcttt cttcttccca ctcatcctaa ccctactcct aatcacataa cctattcccc 14160 cgagcaatct caattacaat atatacacca acaaacaatg ttcaaccagt aactactact 14220 aatcaacgcc cataatcata caaagccccc gcaccaatag gatcctcccg aatcaaccct 14280 gacccctctc cttcataaat tattcagctt cctacactat taaagtttac cacaaccacc 14340 accccatcat actctttcac ccacagcacc aatcctacct ccatcgctaa ccccactaaa 14400 acactcacca agacctcaac ccctgacccc catgcctcag gatactcctc aatagccatc 14460 gctgtagtat atccaaagac aaccatcatt ccccctaaat aaattaaaaa aactattaaa 14520 cccatataac ctcccccaaa attcagaata ataacacacc cgaccacacc gctaacaatc 14580 aatactaaac ccccataaat aggagaaggc ttagaagaaa accccacaaa ccccattact 14640 aaacccacac tcaacagaaa caaagcatac atcattattc tcgcacggac tacaaccacg 14700 accaatgata tgaaaaacca tcgttgtatt tcaactacaa gaacaccaat gaccccaata 14760 cgcaaaacta accccctaat aaaattaatt aaccactcat tcatcgacct ccccacccca 14820 tccaacatct ccgcatgatg aaacttcggc tcactccttg gcgcctgcct gattctccaa 14880 atcaccacag gactattcct agccatgcac tactcaccag acgcctcaac cgccttttca 14940 tcaatcgccc acatcactcg agacgtaaat tatggctgaa tcatccgcta ccttcacgcc 15000 aatggcgcct caatattctt tatctgcctc ttcctacaca tcgggcgagg cctatattac 15060 ggatcatttc tctactcaga aacctgaaac atcggcatta tcctcctgct tgcaactata 15120 gcaacagcct tcataggcta tgtcctcccg tgaggccaaa tatcattctg aggggccaca 15180 gtaattacaa acttactatc cgccatccca tacattggga cagacctagt tcaatgaatc 15240 tgaggaggct actcagtaga cagtcccacc ctcacacgat tctttacctt tcacttcatc 15300 ttgcccttca ttattgcagc cctagcagca ctccacctcc tattcttgca cgaaacggga 15360 tcaaacaacc ccctaggaat cacctcccat tccgataaaa tcaccttcca cccttactac 15420 acaatcaaag acgccctcgg cttacttctc ttccttctct ccttaatgac attaacacta 15480 ttctcaccag acctcctagg cgacccagac aattataccc tagccaaccc cttaaacacc 15540 cctccccaca tcaagcccga atgatatttc ctattcgcct acacaattct ccgatccgtc 15600 cctaacaaac taggaggcgt ccttgcccta ttactatcca tcctcatcct agcaataatc 15660 cccatcctcc atatatccaa acaacaaagc ataatatttc gcccactaag ccaatcactt 15720 tattgactcc tagccgcaga cctcctcatt ctaacctgaa tcggaggaca accagtaagc 15780 taccctttta ccatcattgg acaagtagca tccgtactat acttcacaac aatcctaatc 15840 ctaataccaa ctatctccct aattgaaaac aaaatactca aatgggcctg tccttgtagt 15900 ataaactaat acaccagtct tgtaaaccgg agatgaaaac ctttttccaa ggacaaatca 15960 gagaaaaagt ctttaactcc accattagca cccaaagcta agattctaat ttaaactatt 16020 ctctgttctt tcatggggaa gcagatttgg gtaccaccca agtattgact cacccatcaa 16080 caaccgctat gtatttcgta cattactgcc agtcaccatg aatattgtac ggtaccataa 16140 atacttgacc acctgtagta cataaaaacc caatccacat caaaaccccc tccccatgct 16200 tacaagcaag tacagcaatc aaccctcaac tatcacacat caactgcaac tccaaagcca 16260 cccctcaccc actaggatac caacaaacct acccaccctt aacagtacat agtacataaa 16320 gccatttacc gtacatagca cattacagtc aaatcccttc tcgtccccat ggatgacccc 16380 cctcagatag gggtcccttg accaccatcc tccgtgaaat caatatcccg cacaagagtg 16440 ctactctcct cgctccgggc ccataacact tgggggtagc taaagtgaac tgtatccgac 16500 atctggttcc tacttcaggg tcataaagcc taaatagccc acacgttccc cttaaataag 16560 acatcacgat g 16571 // ID KX702229; SV 1; circular; genomic DNA; STD; HUM; 16570 BP. XX AC KX702229; XX DT 24-AUG-2016 (Rel. 129, Created) DT 24-AUG-2016 (Rel. 129, Last updated, Version 1) XX DE Homo sapiens haplogroup R2b mitochondrion, complete genome. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OG Mitochondrion XX RN [1] RP 1-16570 RA Greenspan B.; RT ; RL Submitted (12-AUG-2016) to the INSDC. RL Family Tree DNA - Genealogy by Genetics, Ltd., 1445 North Loop West, Suite RL 820, Houston, TX 77008, USA XX DR MD5; 62773938ad41fbf151c0d08f8286ef2c. DR Ensembl-Gn; ENSG00000198695; homo_sapiens. DR Ensembl-Gn; ENSG00000198712; homo_sapiens. DR Ensembl-Gn; ENSG00000198763; homo_sapiens. DR Ensembl-Gn; ENSG00000198804; homo_sapiens. DR Ensembl-Gn; ENSG00000198840; homo_sapiens. DR Ensembl-Gn; ENSG00000198886; homo_sapiens. DR Ensembl-Gn; ENSG00000212907; homo_sapiens. DR Ensembl-Gn; ENSG00000228253; homo_sapiens. DR Ensembl-Tr; ENST00000361227; homo_sapiens. DR Ensembl-Tr; ENST00000361335; homo_sapiens. DR Ensembl-Tr; ENST00000361381; homo_sapiens. DR Ensembl-Tr; ENST00000361453; homo_sapiens. DR Ensembl-Tr; ENST00000361624; homo_sapiens. DR Ensembl-Tr; ENST00000361681; homo_sapiens. DR Ensembl-Tr; ENST00000361739; homo_sapiens. DR Ensembl-Tr; ENST00000361851; homo_sapiens. XX FH Key Location/Qualifiers FH FT source 1..16570 FT /organism="Homo sapiens" FT /organelle="mitochondrion" FT /isolate="FTDNA 327440" FT /mol_type="genomic DNA" FT /note="ethnicity:Armenian; origin_locality:Turkey: Mus" FT /db_xref="taxon:9606" FT /haplogroup="R2b" FT D-loop complement(join(16029..16570,1..579)) FT tRNA 579..649 FT /product="tRNA-Phe" FT rRNA 650..1603 FT /product="12S ribosomal RNA" FT tRNA 1604..1672 FT /product="tRNA-Val" FT rRNA 1673..3230 FT /product="16S ribosomal RNA" FT tRNA 3231..3305 FT /product="tRNA-Leu" FT /note="codons recognized: UUR" FT gene 3308..4263 FT /gene="ND1" FT CDS 3308..4263 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:4262..4263,aa:TERM) FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9B1L5" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:Q9B1L5" FT /protein_id="AOD41808.1" FT /translation="MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGL FT LQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLF FT ILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLS FT TLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFAL FT FFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFR FT YDQLMHLLWKNFLPLTLALLMWHVSMPITISSIPPQT" FT tRNA 4264..4332 FT /product="tRNA-Ile" FT tRNA complement(4330..4401) FT /product="tRNA-Gln" FT tRNA 4403..4470 FT /product="tRNA-Met" FT gene 4471..5512 FT /gene="ND2" FT CDS 4471..5512 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:5512,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXY9" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q7GXY9" FT /protein_id="AOD41809.1" FT /translation="MNPLAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLT FT KKMNPRSTEAAIKYFLTQATASMILLMAILFNNMLSGQWTMTNTTNQYSSLMIMMAMAM FT KLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTLSILSIM FT AGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLN FT SSTTTLLLSRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTI FT MATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPFLPTLIALTTLLLPIS FT PFMLMIL" FT tRNA 5513..5580 FT /product="tRNA-Trp" FT tRNA complement(5588..5656) FT /product="tRNA-Ala" FT tRNA complement(5658..5730) FT /product="tRNA-Asn" FT tRNA complement(5762..5827) FT /product="tRNA-Cys" FT tRNA complement(5827..5892) FT /product="tRNA-Tyr" FT gene 5905..7446 FT /gene="COX1" FT CDS 5905..7446 FT /codon_start=1 FT /transl_table=2 FT /gene="COX1" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:U5YWV7" FT /db_xref="InterPro:IPR000883" FT /db_xref="InterPro:IPR023615" FT /db_xref="InterPro:IPR023616" FT /db_xref="InterPro:IPR033944" FT /db_xref="InterPro:IPR036927" FT /db_xref="UniProtKB/TrEMBL:U5YWV7" FT /protein_id="AOD41810.1" FT /translation="MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPG FT NLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWL FT LPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN FT FITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP FT AGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG FT FLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW FT ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPL FT FSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGS FT FISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS" FT tRNA complement(7446..7517) FT /product="tRNA-Ser" FT /note="codons recognized: UCN" FT tRNA 7519..7586 FT /product="tRNA-Asp" FT gene 7587..8270 FT /gene="COX2" FT CDS 7587..8270 FT /codon_start=1 FT /transl_table=2 FT /gene="COX2" FT /product="cytochrome c oxidase subunit II" FT /db_xref="GOA:U5Z487" FT /db_xref="InterPro:IPR001505" FT /db_xref="InterPro:IPR002429" FT /db_xref="InterPro:IPR008972" FT /db_xref="InterPro:IPR011759" FT /db_xref="InterPro:IPR014222" FT /db_xref="InterPro:IPR034210" FT /db_xref="InterPro:IPR036257" FT /db_xref="UniProtKB/TrEMBL:U5Z487" FT /protein_id="AOD41811.1" FT /translation="MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLT FT LTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQW FT YWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSW FT AVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMG FT PVFTL" FT tRNA 8296..8365 FT /product="tRNA-Lys" FT gene 8367..8573 FT /gene="ATP8" FT CDS 8367..8573 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP8" FT /product="ATP synthase F0 subunit 8" FT /db_xref="GOA:U5YV54" FT /db_xref="InterPro:IPR001421" FT /db_xref="InterPro:IPR039017" FT /db_xref="UniProtKB/TrEMBL:U5YV54" FT /protein_id="AOD41812.1" FT /translation="MPQLNTTVWPTMITPMLLTLFLITQLKMLNTNYHLPPSPKPMKMK FT NYNKPWEPKWTKICSLHSLPPQS" FT gene 8528..9208 FT /gene="ATP6" FT CDS 8528..9208 FT /codon_start=1 FT /transl_table=2 FT /gene="ATP6" FT /product="ATP synthase F0 subunit 6" FT /db_xref="GOA:Q9B1D3" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="InterPro:IPR035908" FT /db_xref="UniProtKB/TrEMBL:Q9B1D3" FT /protein_id="AOD41813.1" FT /translation="MNENLFASFIAPTILGLPAAVLIILFPPLLIPTSKYLINNRLITT FT QQWLIKLTSKQMMTMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAM FT AIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTAN FT ITAGHLLMHLIGSATLAMSTINLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYL FT HDNT" FT gene 9208..9991 FT /gene="COX3" FT CDS 9208..9991 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:9991,aa:TERM) FT /gene="COX3" FT /product="cytochrome c oxidase subunit III" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:B2KLD8" FT /db_xref="InterPro:IPR000298" FT /db_xref="InterPro:IPR013833" FT /db_xref="InterPro:IPR024791" FT /db_xref="InterPro:IPR033945" FT /db_xref="InterPro:IPR035973" FT /db_xref="UniProtKB/TrEMBL:B2KLD8" FT /protein_id="AOD41814.1" FT /translation="MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLML FT GLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHS FT SLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQAL FT LITILLGLYFTLLQTSEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQ FT LMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS" FT tRNA 9992..10059 FT /product="tRNA-Gly" FT gene 10060..10405 FT /gene="ND3" FT CDS 10060..10405 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:10405,aa:TERM) FT /gene="ND3" FT /product="NADH dehydrogenase subunit 3" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q7GXZ5" FT /db_xref="InterPro:IPR000440" FT /db_xref="InterPro:IPR038430" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ5" FT /protein_id="AOD41815.1" FT /translation="MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMS FT PARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAY FT EWLQKGLDWTE" FT tRNA 10406..10470 FT /product="tRNA-Arg" FT gene 10471..10767 FT /gene="ND4L" FT CDS 10471..10767 FT /codon_start=1 FT /transl_table=2 FT /gene="ND4L" FT /product="NADH dehydrogenase subunit 4L" FT /db_xref="GOA:Q7GXZ4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR039428" FT /db_xref="UniProtKB/TrEMBL:Q7GXZ4" FT /protein_id="AOD41816.1" FT /translation="MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMAT FT LMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQC" FT gene 10761..12138 FT /gene="ND4" FT CDS 10761..12138 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:12138,aa:TERM) FT /gene="ND4" FT /product="NADH dehydrogenase subunit 4" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:H9EC08" FT /db_xref="InterPro:IPR000260" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="InterPro:IPR010227" FT /db_xref="UniProtKB/TrEMBL:H9EC08" FT /protein_id="AOD41817.1" FT /translation="MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQI FT NNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQI FT SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIA FT LIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVE FT APIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTD FT LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSR FT IMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN FT MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS FT S" FT tRNA 12139..12207 FT /product="tRNA-His" FT tRNA 12208..12266 FT /product="tRNA-Ser" FT /note="codons recognized: AGY" FT tRNA 12267..12337 FT /product="tRNA-Leu" FT /note="codons recognized: CUN" FT gene 12338..14149 FT /gene="ND5" FT CDS 12338..14149 FT /codon_start=1 FT /transl_table=2 FT /gene="ND5" FT /product="NADH dehydrogenase subunit 5" FT /db_xref="GOA:B2KM00" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR010934" FT /db_xref="UniProtKB/TrEMBL:B2KM00" FT /protein_id="AOD41818.1" FT /translation="MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFI FT ISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFS FT LWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARAD FT ANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAG FT KSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLAENSPLIQTLTLCLG FT AITTLFAAVCALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLF FT MCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETA FT NMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLA FT AGSLFAGFLITNNISPASPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPL FT CTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSIV FT TSTQKGMIKLYFLSFFFPLILTLLLIT" FT gene complement(14150..14674) FT /gene="ND6" FT CDS complement(14150..14674) FT /codon_start=1 FT /transl_table=2 FT /gene="ND6" FT /product="NADH dehydrogenase subunit 6" FT /db_xref="GOA:U5Z977" FT /db_xref="InterPro:IPR001457" FT /db_xref="UniProtKB/TrEMBL:U5Z977" FT /protein_id="AOD41819.1" FT /translation="MMYALFLLSVGLVMGFVGFSSKPSPIYGGLVLIVSGVVGCVIILN FT FGGGYMGLMVFLIYLGGMMVVFGYTTAMAIEEYPEAWGSGVEVLVSVLVGLAMEVGLVL FT WVKEYDGVVVVVNFNSVGSWMIYEGEGSGLIREDPIGAGALYDYGRWLVVVTGWTLFVG FT VYIVIEIARGN" FT tRNA complement(14675..14743) FT /product="tRNA-Glu" FT gene 14748..15888 FT /gene="CYTB" FT CDS 14748..15888 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:15888,aa:TERM) FT /gene="CYTB" FT /product="cytochrome b" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q6VJ80" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR027387" FT /db_xref="InterPro:IPR030689" FT /db_xref="InterPro:IPR036150" FT /db_xref="UniProtKB/TrEMBL:Q6VJ80" FT /protein_id="AOD41820.1" FT /translation="MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQI FT TTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYY FT GSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW FT IWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHP FT YYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTIL FT RSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGG FT QPVSYPFTIIGQVASVLYFTTILILMPTISLIENKMLKWA" FT tRNA 15889..15954 FT /product="tRNA-Thr" FT tRNA complement(15956..16024) FT /product="tRNA-Pro" XX SQ Sequence 16570 BP; 5121 A; 5187 C; 2172 G; 4090 T; 0 other; gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt 60 cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc 120 gcagtatctg tctttgattc ctgcctcatc ccattattta tcgcacctac gttcaatatt 180 acaggcgaac atacttacta aagtgtgtta attaattaat gcttgtagga cataataata 240 acaattgaat gtctgcacag ccgctttcca cacagacatc ataacaaaaa atttccacca 300 aacccccccc tccccccgct tctggccaca gcacttaaac acatctctgc caaaccccaa 360 aaacaaagaa ccctaacacc agcctaacca gatttcaaat tttatctttt ggcggtatgc 420 acttttaaca gtcacccccc aactaacaca ttattttccc ctcccactcc catactacta 480 atctcatcaa tacaaccccc gcccatccta cccagcacac acacaccgct gctaacccca 540 taccccgaac caaccaaacc ccaaagacac cccccacagt ttatgtagct tacctcctca 600 aagcaataca ctgaaaatgt ttagacgggc tcacatcacc ccataaacaa ataggtttgg 660 tcctagcctt tctattagct cttagtaaga ttacacatgc aagcatcccc gttccagtga 720 gttcaccctc taaatcacca cgatcaaaag ggacaagcat caagcacgca gcaatgcagc 780 tcaaaacgct tagcctagcc acacccccac gggaaacagc agtgattaac ctttagcaat 840 aaacgaaagt ttaactaagc tatactaacc ccagggttgg tcaatttcgt gccagccacc 900 gcggtcacac gattaaccca agtcaataga agccggcgta aagagtgttt tagatcaccc 960 cctccccaat aaagctaaaa ctcacctgag ttgtaaaaaa ctccagttga cacaaaatag 1020 actacgaaag tggctttaac atatctgaac acacaatagc taagacccaa actgggatta 1080 gataccccac tatgcttagc cctaaacctc aacagttaaa tcaacaaaac tgctcgccag 1140 aacactacga gccacagctt aaaactcaaa ggacctggcg gtgcttcata tccctctaga 1200 ggagcctgtt ctgtaatcga taaaccccga tcaacctcac cacctcttgc tcagcctata 1260 taccgccatc ttcagcaaac cctgatgaag gctacaaagt aagcgcaagt acccacgtaa 1320 agacgttagg tcaaggtgta gcccatgagg tggcaagaaa tgggctacat tttctacccc 1380 agaaaactac gatagccctt atgaaactta agggtcgaag gtggatttag cagtaaactg 1440 agagtagagt gcttagttga acagggccct gaagcgcgta cacaccgccc gtcaccctcc 1500 tcaagtatac ttcaaaggac atttaactaa aacccctacg catttatata gaggagacaa 1560 gtcgtaacat ggtaagtgta ctggaaagtg cacttggacg aaccagagtg tagcttaaca 1620 caaagcaccc aacttacact taggagattt caacttaact tgaccgctct gagctaaacc 1680 tagccccaaa cccactccac cttactacca gacaacctta gccaaaccat ttacccaaat 1740 aaagtatagg cgatagaaat tgaaacctgg cgcaatagat atagtaccgc aagggaaaga 1800 tgaaaaatta taaccaagca taatatagca aggactaacc cctatacctt ctgcataatg 1860 aattaactag aaataacttt gcaaggagag ccaaagctaa gacccccgaa accagacgag 1920 ctacctaaga acagctaaaa gagcacaccc gtctatgtag caaaatagtg ggaagattta 1980 taggtagagg cgacaaacct accgagcctg gtgatagctg gttgtccaag atagaatctt 2040 agttcaactt taaatttgcc cacagaaccc tctaaatccc cttgtaaatt taactgttag 2100 tccaaagagg aacagctctt tggacactag gaaaaaacct tgtagagaga gtaaaaaatt 2160 taacacccat agtaggccta aaagcagcca ccaattaaga aagcgttcaa gctcaacacc 2220 cactacctaa aaaatcccaa acatataact gaactcctca cacccaattg gaccaatcta 2280 tcaccctata gaagaactaa tgttagtata agtaacatga aaacattctc ctccgcataa 2340 gcctgcgtca gattaaaaca ctgaactgac aattaacagc ccaatatcta caatcaacca 2400 acaagtcatt attaccctca ctgtcaaccc aacacaggca tgctcataag gaaaggttaa 2460 aaaaagtaaa aggaactcgg caaatcttac cccgcctgtt taccaaaaac atcacctcta 2520 gcatcaccag tattagaggc accgcctgcc cagtgacaca tgtttaacgg ccgcggtacc 2580 ctaaccgtgc aaaggtagca taatcacttg ttccttaaat agggacctgt atgaatggct 2640 ccacgagggt tcagctgtct cttactttta accagtgaaa ttgacctgcc cgtgaagagg 2700 cgggcatgac acagcaagac gagaagaccc tatggagctt taatttatta atgcaaacag 2760 tacctaacaa acccacaggt cctaaactac caaacctgca ttaaaaattt cggttggggc 2820 gacctcggag cagaacccaa cctccgagca gtacatgcta agacttcacc agtcaaagcg 2880 aactactata ctcaattgat ccaataactt gaccaacgga acaagttacc ctagggataa 2940 cagcgcaatc ctattctaga gtccatatca acaatagggt ttacgacctc gatgttggat 3000 caggacatcc cgatggtgca gccgctatta aaggttcgtt tgttcaacga ttaaagtcct 3060 acgtgatctg agttcagacc ggagtaatcc aggtcggttt ctatctactt caaattcctc 3120 cctgtacgaa aggacaagag aaataaggcc tacttcacaa agcgccttcc cccgtaaatg 3180 atatcatctc aacttagtat tatacccaca cccacccaag aacagggttt gttaagatgg 3240 cagagcccgg taatcgcata aaacttaaaa ctttacagtc agaggttcaa ttcctcttct 3300 taacaacata cccatggcca acctcctact cctcattgta cccattctaa tcgcaatggc 3360 attcctaatg cttaccgaac gaaaaattct aggctatata caactacgca aaggccccaa 3420 cgttgtaggc ccctacgggc tactacaacc cttcgctgac gccataaaac tcttcaccaa 3480 agagccccta aaacccgcca catctaccat caccctctac atcaccgccc cgaccttagc 3540 tctcaccatc gctcttctac tatgaacccc cctccccata cccaaccccc tggtcaacct 3600 caacctaggc ctcctattta ttctagccac ctctagccta gccgtttact caatcctctg 3660 atcagggtga gcatcaaact caaactacgc cctgatcggc gcactgcgag cagtagccca 3720 aacaatctca tatgaagtca ccctagccat cattctacta tcaacattac taataagtgg 3780 ctcctttaac ctctccaccc ttatcacaac acaagaacac ctctgattac tcctgccatc 3840 atgacccttg gccataatat gatttatctc cacactagca gagaccaacc gaaccccctt 3900 cgaccttgcc gaaggggagt ccgaactagt ctcaggcttc aacatcgaat acgccgcagg 3960 ccccttcgcc ctattcttca tagccgaata cacaaacatt attataataa acaccctcac 4020 cactacaatc ttcctaggaa caacatatga cgcactctcc cctgaactct acacaacata 4080 ttttgtcacc aagaccctac ttctaacctc cctgttctta tgaattcgaa cagcataccc 4140 ccgattccgc tacgaccaac tcatacacct cctatgaaaa aacttcctac cactcaccct 4200 agcattactt atatgacatg tctccatacc cattacaatc tccagcattc cccctcaaac 4260 ctaagaaata tgtctgataa aagagttact ttgatagagt aaataatagg agcttaaacc 4320 cccttatttc taggactatg agaatcgaac ccatccctga gaatccaaaa ttctccgtgc 4380 cacctatcac accccatcct aaagtaaggt cagctaaata agctatcggg cccatacccc 4440 gaaaatgttg gttataccct tcccgtacta attaatcccc tggcccaacc cgtcatctac 4500 tctaccatct ttgcaggcac actcatcaca gcgctaagct cgcactgatt ttttacctga 4560 gtaggcctag aaataaacat gctagctttt attccagttc taaccaaaaa aataaaccct 4620 cgttccacag aagctgccat caagtatttc ctcacgcaag caaccgcatc cataatcctt 4680 ctaatagcta tcctcttcaa caatatactc tccggacaat gaaccataac caatactacc 4740 aatcaatact catcattaat aatcataata gctatagcaa taaaactagg aatagccccc 4800 tttcacttct gagtcccaga ggttacccaa ggcacccctc tgacatccgg cctgcttctt 4860 ctcacatgac aaaaactagc ccccatctca atcatatacc aaatctctcc ctcactaaac 4920 gtaagccttc tcctcactct ctcaatctta tccatcatag caggcagttg aggtggatta 4980 aaccaaaccc agctacgcaa aatcttagca tactcctcaa ttacccacat aggatgaata 5040 atagcagttc taccgtacaa ccctaacata accattctta atttaactat ttatattatc 5100 ctaactacta ccgcattcct actactcaac ttaaactcca gcaccacgac cctactacta 5160 tctcgcacct gaaacaagct aacatgacta acacccttaa ttccatccac cctcctctcc 5220 ctaggaggcc tgcccccgct aaccggcttt ttgcccaaat gggccattat cgaagaattc 5280 acaaaaaaca atagcctcat catccccacc atcatagcca ccatcaccct ccttaacctc 5340 tacttctacc tacgcctaat ctactccacc tcaatcacac tactccccat atctaacaac 5400 gtaaaaataa aatgacagtt tgaacataca aaacccaccc cattcctccc cacactcatc 5460 gcccttacca cgctactcct acctatctcc ccttttatac taataatctt atagaaattt 5520 aggttaaata cagaccaaga gccttcaaag ccctcagtaa gttgcaatac ttaatttctg 5580 taacagctaa ggactgcaaa accccactct gcatcaactg aacgcaaatc agccacttta 5640 attaagctaa gcccttacta gaccaatggg acttaaaccc acaaacactt agttaacagc 5700 taagcaccct aatcaactgg cttcaatcta cttctcccgc cgccgggaaa aaaggcggga 5760 gaagccccgg caggtttgaa gctgcttctt cgaatttgca attcaatatg aaaatcacct 5820 cggagctggt aaaaagaggc ctaacccctg tctttagatt tacagtccaa tgcttcactc 5880 agccatttta cctcaccccc actgatgttc gccgaccgtt gactattctc tacaaaccac 5940 aaagacattg gaacactata cctattattc ggcgcatgag ctggagtcct aggcacagct 6000 ctaagcctcc ttattcgagc cgagctgggc cagccaggca accttctagg taacgaccac 6060 atctacaacg ttatcgtcac agcccatgca tttgtaataa tcttcttcat agtaataccc 6120 atcataatcg gaggctttgg caactgacta gttcccctaa taatcggtgc ccccgatatg 6180 gcgtttcccc gcataaacaa cataagcttc tgactcttac ctccctctct cctactcctg 6240 ctcgcatctg ctatagtgga ggccggagca ggaacaggtt gaacagtcta ccctccctta 6300 gcagggaact actcccaccc tggagcctcc gtagacctaa ccatcttctc cttacaccta 6360 gcaggtgtct cctctatctt aggggccatc aatttcatca caacaattat caatataaaa 6420 ccccctgcca taacccaata ccaaacgccc ctcttcgtct gatccgtcct aatcacagca 6480 gtcctacttc tcctatctct cccagtccta gctgctggca tcactatact actaacagac 6540 cgcaacctca acaccacctt cttcgacccc gccggaggag gagaccccat tctataccaa 6600 cacctattct gatttttcgg tcaccctgaa gtttatattc ttatcctacc aggcttcgga 6660 ataatctccc atattgtaac ttactactcc ggaaaaaaag aaccatttgg atacataggt 6720 atggtctgag ctatgatatc aattggcttc ctagggttta tcgtgtgagc acaccatata 6780 tttacagtag gaatagacgt agacacacga gcatatttca cctccgctac cataatcatc 6840 gctatcccca ccggcgtcaa agtatttagc tgactcgcca cactccacgg aagcaatatg 6900 aaatgatctg ctgcagtgct ctgagcccta ggattcatct ttcttttcac cgtaggtggc 6960 ctgactggca ttgtattagc aaactcatca ctagacatcg tactacacga cacgtactac 7020 gttgtagctc acttccacta tgtcctatca ataggagctg tatttgccat cataggaggc 7080 ttcattcact gatttcccct attctcaggc tacaccctag accaaaccta cgccaaaatc 7140 catttcacta tcatattcat cggcgtaaat ctaactttct tcccacaaca ctttctcggc 7200 ctatccggaa tgccccgacg ttactcggac taccccgatg catacaccac atgaaacatc 7260 ctatcatctg taggctcatt catttctcta acagcagtaa tattaataat tttcatgatt 7320 tgagaagcct tcgcttcgaa gcgaaaagtc ctaatagtag aagaaccctc cataaacctg 7380 gagtgactat atggatgccc cccaccctac cacacattcg aagaacccgt atacataaaa 7440 tctagacaaa aaaggaagga atcgaacccc ccaaagctgg tttcaagcca accccatggc 7500 ctccatgact ttttcaaaaa ggtattagaa aaaccatttc ataactttgt caaagttaaa 7560 ttataggcta aatcctatat atcttaatgg cacatgcagc gcaagtaggt ctacaagacg 7620 ctacttcccc tatcatagaa gagcttatca cctttcacga tcacgccctc ataatcattt 7680 tccttatctg cttcctagtc ctgtatgccc ttttcctaac actcacaaca aaactaacta 7740 atactaacat ctcagacgct caggaaatag aaaccgtctg aactatcctg cccgccatca 7800 tcctagtcct catcgccctc ccatccctac gcatccttta cataacagac gaggtcaacg 7860 atccctccct taccatcaaa tcaattggcc accaatggta ctgaacctac gagtacaccg 7920 actacggcgg actaatcttc aactcctaca tacttccccc attattccta gaaccaggcg 7980 acctgcgact ccttgacgtt gacaatcgag tagtactccc gattgaagcc cccattcgta 8040 taataattac atcacaagac gtcttgcact catgagctgt ccccacatta ggcttaaaaa 8100 cagatgcaat tcccggacgt ctaaaccaaa ccactttcac cgctacacga ccgggggtat 8160 actacggtca atgctctgaa atctgtggag caaaccacag tttcatgccc atcgtcctag 8220 aattaattcc cctaaaaatc tttgaaatag ggcccgtatt taccctatag caccccctct 8280 accccctcta gagcccactg taaagctaac ttagcattaa ccttttaagt taaagattaa 8340 gagaaccaac acctctttac agtgaaatgc cccaactaaa tactaccgta tggcccacca 8400 taattacccc catactcctt acactattcc tcatcaccca actaaaaata ttaaacacaa 8460 actaccacct acccccctca ccaaagccca taaaaataaa aaattataac aaaccctgag 8520 aaccaaaatg aacgaaaatc tgttcgcttc attcattgcc cccacaatcc taggcctacc 8580 cgccgcagta ctgatcattc tatttccccc tctattgatc cccacctcca aatatctcat 8640 caacaaccga ctaatcacca cccaacaatg actaatcaaa ctaacctcaa aacaaatgat 8700 aaccatacac aacactaaag gacgaacctg atctcttata ctagtatcct taatcatttt 8760 tattgccaca actaacctcc tcggactcct acctcactca tttacaccaa ccacccaact 8820 atctataaac ctagccatgg ccatcccctt atgagcgggc gcagtgatta taggctttcg 8880 ctctaagatt aaaaatgccc tagcccactt cttaccacaa ggcacaccta caccccttat 8940 ccccatacta gttattatcg aaaccatcag cctactcatt caaccaatag ccctggccgt 9000 acgcctaacc gctaacatta ctgcaggcca cctactcatg cacctaattg gaagcgccac 9060 cctagcaata tcaaccatta accttccctc tacacttatc atcttcacaa ttctaattct 9120 actgactatc ctagaaatcg ctgtcgcctt aatccaagcc tacgttttca cacttctagt 9180 aagcctctac ctgcacgaca acacataatg acccaccaat cacatgccta tcatatagta 9240 aaacccagcc catgacccct aacaggggcc ctctcagccc tcctaatgac ctccggccta 9300 gccatgtgat ttcacttcca ctccataacg ctcctcatac taggcctact aaccaacaca 9360 ctaaccatat accaatgatg gcgcgatgta acacgagaaa gcacatacca aggccaccac 9420 acaccacctg tccaaaaagg ccttcgatac gggataatcc tatttattac ctcagaagtt 9480 tttttcttcg caggattttt ctgagccttt taccactcca gcctagcccc taccccccaa 9540 ttaggagggc actggccccc aacaggcatc accccgctaa atcccctaga agtcccactc 9600 ctaaacacat ccgtattact cgcatcagga gtatcaatca cctgagctca ccatagtcta 9660 atagaaaaca accgaaacca aataattcaa gcactgctta ttacaatttt actgggtctc 9720 tattttaccc tcctacaaac ctcagagtac ttcgagtctc ccttcaccat ttcc