ID LN875695; SV 1; linear; genomic DNA; STD; HUM; 262 BP. XX AC LN875695; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5301 (IKZF1-#179) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-262 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 11b2f3211f1dd11b165ff5c5815c91a6. XX FH Key Location/Qualifiers FH FT source 1..262 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5301 (IKZF1-#179)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>102 FT /gene="IKZF1" FT /number=3 FT variation 102^103 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 103..104 FT /note="additional sequence of 2 nucleotides" FT variation 104^105 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <105..>262 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 262 BP; 70 A; 55 C; 47 G; 90 T; 0 other; gagtctgtga aggtcacacc ctctggtctt ctcccagccc atagggtata aataatctga 60 attgacggca tccagggatc tcagaaatta ttagtacatc ccccgaaaca tcaagtctag 120 tgtaactgtt tcttcttcaa ggtgatttgc attttattcc tgaatgcctg agggttcttt 180 atttaacctt gaagttaaat accctaatta ggatgtatct tggtctattc attcggaata 240 aaaaattcct gccattttgt ct 262 // ID LN875696; SV 1; linear; genomic DNA; STD; HUM; 267 BP. XX AC LN875696; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5367 (IKZF1-#186) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-267 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 83843592d76df22566002a92a3975f49. XX FH Key Location/Qualifiers FH FT source 1..267 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5367 (IKZF1-#186)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>101 FT /gene="IKZF1" FT /number=3 FT variation 101^102 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 102..112 FT /note="additional sequence of 11 nucleotides" FT variation 112^113 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <113..>267 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 267 BP; 69 A; 58 C; 50 G; 90 T; 0 other; gagtctgtga aggtcacacc ctctggtctt ctcccagccc atagggtata aataatctga 60 attgacggca tccagggatc tcagaaatta ttagtacatc cgccgcccgc tgaacatcaa 120 gtctagtgta actgtttctt cttcaaggtg atttgcattt tattcctgaa tgcctgaggg 180 ttctttattt aaccttgaag ttaaataccc taattaggat gtatcttggt ctattcattc 240 ggaataaaaa attcctgcca ttttgtc 267 // ID LN875697; SV 1; linear; genomic DNA; STD; HUM; 257 BP. XX AC LN875697; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5460 (IKZF1-#197) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-257 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 1eefa334416bea408afe07957c9173ce. XX FH Key Location/Qualifiers FH FT source 1..257 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5460 (IKZF1-#197)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>100 FT /gene="IKZF1" FT /number=3 FT variation 100^101 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 101..103 FT /note="additional sequence of 3 nucleotides" FT variation 103^104 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <104..>257 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 257 BP; 69 A; 53 C; 46 G; 89 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtacatcc gacacatcaa gtctagtgta 120 actgtttctt cttcaaggtg atttgcattt tattcctgaa tgcctgaggg ttctttattt 180 aaccttgaag ttaaataccc taattaggat gtatcttggt ctattcattc ggaataaaaa 240 attcctgcca ttttgtc 257 // ID LN875698; SV 1; linear; genomic DNA; STD; HUM; 200 BP. XX AC LN875698; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5473 (IKZF1-#198) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-200 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 99f41045e3cd950019de605fbfec2f24. XX FH Key Location/Qualifiers FH FT source 1..200 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5473 (IKZF1-#198)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>100 FT /gene="IKZF1" FT /number=3 FT variation 100^101 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 101..107 FT /note="additional sequence of 7 nucleotides" FT variation 107^108 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <108..>200 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 200 BP; 54 A; 43 C; 38 G; 65 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtacatcc aaacaggcaa gtctagtgta 120 actgtttctt cttcaaggtg atttgcattt tattcctgaa tgcctgaggg ttctttattt 180 aaccttgaag ttaaataccc 200 // ID LN875699; SV 1; linear; genomic DNA; STD; HUM; 257 BP. XX AC LN875699; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5504 (IKZF1-#203) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-257 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 8f00ddd9c81d59b5b9bfdb3e22eda892. XX FH Key Location/Qualifiers FH FT source 1..257 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5504 (IKZF1-#203)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>100 FT /gene="IKZF1" FT /number=3 FT variation 100^101 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 101..104 FT /note="additional sequence of 4 nucleotides" FT variation 104^105 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <105..>257 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 257 BP; 70 A; 53 C; 45 G; 89 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtacatcc aaaccatcaa gtctagtgta 120 actgtttctt cttcaaggtg atttgcattt tattcctgaa tgcctgaggg ttctttattt 180 aaccttgaag ttaaataccc taattaggat gtatcttggt ctattcattc ggaataaaaa 240 attcctgcca ttttgtc 257 // ID LN875700; SV 1; linear; genomic DNA; STD; HUM; 257 BP. XX AC LN875700; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5527 (IKZF1-#205) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-257 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 0ec5add1a3810b6655e060e241f1306c. XX FH Key Location/Qualifiers FH FT source 1..257 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5527 (IKZF1-#205)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>98 FT /gene="IKZF1" FT /number=3 FT variation 98^99 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 99..102 FT /note="additional sequence of 4 nucleotides" FT variation 102^103 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <103..>257 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 257 BP; 70 A; 50 C; 48 G; 89 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtacatag ggacatcaag tctagtgtaa 120 ctagtttctt cttcaaggtg atttgcattt tattcctgaa tgcctgaggg ttctttattt 180 aaccttgaag ttaaataccc taattaggat gtatcttggt ctattcattc ggaataaaaa 240 attcctgcca ttttgtc 257 // ID LN875701; SV 1; linear; genomic DNA; STD; HUM; 255 BP. XX AC LN875701; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5543 (IKZF1-#207) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-255 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; e3ec8975962e9165c3fe162b48ee76c7. XX FH Key Location/Qualifiers FH FT source 1..255 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5543 (IKZF1-#207)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>101 FT /gene="IKZF1" FT /number=3 FT variation 101^102 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 102..104 FT /note="additional sequence of 3 nucleotides" FT variation 104^105 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <105..>255 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 255 BP; 66 A; 51 C; 49 G; 89 T; 0 other; gagtctgtga aggtcacacc ctctggtctt ctcccagccc atagggtata aataatctga 60 attgacggca tccagggatc tcagaaatta ttagtacatc cgggtcaagt ctagtgtaac 120 tgtttcttct tcaaggtgat ttgcatttta ttcctgaatg cctgagggtt ctttatttaa 180 ccttgaagtt aaatacccta attaggatgt atcttggtct attcattcgg aataaaaaat 240 tcctgccatt ttgtc 255 // ID LN875702; SV 1; linear; genomic DNA; STD; HUM; 127 BP. XX AC LN875702; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5593 (IKZF1-#217) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-127 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 19f15187fca665099bc6da3ef64ed580. XX FH Key Location/Qualifiers FH FT source 1..127 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5593 (IKZF1-#217)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>45 FT /gene="IKZF1" FT /number=3 FT variation 45^46 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 46 FT /note="additional sequence of 1 nucleotide" FT variation 46^47 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <47..>127 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 127 BP; 33 A; 23 C; 23 G; 48 T; 0 other; tctgaattga cggcatccag ggatctcaga aattattagt acatctaaca tcaagtctag 60 tgtaactgtt tcttcttcaa ggtgatttgc attttattcc tgaatgcctg agggttcttt 120 atttaac 127 // ID LN875703; SV 1; linear; genomic DNA; STD; HUM; 240 BP. XX AC LN875703; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5687 (IKZF1-#233) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-240 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; e537c2fdb5128086f5a88f11b9b9cd97. XX FH Key Location/Qualifiers FH FT source 1..240 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5687 (IKZF1-#233)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>83 FT /gene="IKZF1" FT /number=3 FT variation 83^84 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 84..92 FT /note="additional sequence of 9 nucleotides" FT variation 92^93 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <93..>240 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 240 BP; 61 A; 52 C; 45 G; 82 T; 0 other; tctgtgaagg tcacaccctc tggtcttctc ccagcccata gggtataaat aatctgaatt 60 gacggcatcc agggatctca gaaccccgaa cgagtctagt gtaactgttt cttcttcaag 120 gtgatttgca ttttattcct gaatgcctga gggttcttta tttaaccttg aagttaaata 180 ccctaattag gatgtatctt ggtctattca ttcggaataa aaaattcctg ccattttgtc 240 // ID LN875704; SV 1; linear; genomic DNA; STD; HUM; 255 BP. XX AC LN875704; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5711 (IKZF1-#236) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-255 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 6b269e844f597cb5f1e16db3d178c495. XX FH Key Location/Qualifiers FH FT source 1..255 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5711 (IKZF1-#236)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>96 FT /gene="IKZF1" FT /number=3 FT variation 96^97 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <96..>255 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 255 BP; 70 A; 50 C; 46 G; 89 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtacgaaa catcaagtct agtgtaactg 120 tttcttcttc aaggtgattt gcattttatt cctgaatgcc tgagggttct ttatttaacc 180 ttgaagttaa ataccctaat taggatgtat cttggtctat tcattcggaa taaaaaattc 240 ctgccatttt gtcta 255 // ID LN875705; SV 1; linear; genomic DNA; STD; HUM; 253 BP. XX AC LN875705; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5800 (IKZF1-#257) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-253 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; e3eda76b915da01f24e6a70a6f953f72. XX FH Key Location/Qualifiers FH FT source 1..253 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5800 (IKZF1-#257)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>96 FT /gene="IKZF1" FT /number=3 FT variation 96^97 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 97..99 FT /note="additional sequence of 3 nucleotides" FT variation 99^100 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <100..>253 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 253 BP; 67 A; 50 C; 45 G; 91 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtacttta catcaagtct agtgtaactg 120 tttcttcttc aaggtgattt gcattttatt cctgaatgcc tgagggttct ttatttaacc 180 ttgaagttaa ataccctaat taggatgtat cttggtctat tcattcggaa taaaaaattc 240 ctgccatttt gtc 253 // ID LN875706; SV 1; linear; genomic DNA; STD; HUM; 269 BP. XX AC LN875706; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5859 (IKZF1-#267) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-269 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 12b571046d36775ca0ecf4e4d64a1223. XX FH Key Location/Qualifiers FH FT source 1..269 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5859 (IKZF1-#267)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>108 FT /gene="IKZF1" FT /number=3 FT variation 108^109 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 109..115 FT /note="additional sequence of 7 nucleotides" FT variation 115^116 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <116..>269 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 269 BP; 71 A; 52 C; 54 G; 92 T; 0 other; aagtctggag tctgtgaagg tcacaccctc tggtcttctc ccagcccata gggtataaat 60 aatctgaatt gacggcatcc agggatctca gaaattatta gtacatccgg gagggatcaa 120 gtctagtgta actgtttctt cttcaaggtg atttgcattt tattcctgaa tgcctgaggg 180 ttctttattt aaccttgaag ttaaataccc taattaggat gtatcttggt ctattcattc 240 ggaataaaaa attcctgcca ttttgtcta 269 // ID LN875707; SV 1; linear; genomic DNA; STD; HUM; 243 BP. XX AC LN875707; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5964 (IKZF1-#276) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-243 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 523926a89ace501927386fa563739a49. XX FH Key Location/Qualifiers FH FT source 1..243 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5964 (IKZF1-#276)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>89 FT /gene="IKZF1" FT /number=3 FT variation 89^90 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 90 FT /note="additional sequence of 1 nucleotide" FT variation 90^91 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <91..>243 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 243 BP; 64 A; 53 C; 40 G; 86 T; 0 other; tcacaccctc tggtcttctc ccagcccata gggtataaat aatctgaatt gacggcatcc 60 agggatctca gaaattatta gtacatcccc catcaagtct agtgtaactg tttcttcttc 120 aaggtgattt gcattttatt cctgaatgcc tgagggttct ttatttaacc ttgaagttaa 180 ataccctaat taggatgtat cttggtctat tcattcggaa taaaaaattc ctgccatttt 240 gtc 243 // ID LN875708; SV 1; linear; genomic DNA; STD; HUM; 262 BP. XX AC LN875708; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 6057 (IKZF1-#285) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-262 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 07c3a8a4eee9e323ea9300725aa9c76a. XX FH Key Location/Qualifiers FH FT source 1..262 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 6057 (IKZF1-#285)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>96 FT /gene="IKZF1" FT /number=3 FT variation 96^97 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 97..111 FT /note="additional sequence of 15 nucleotides" FT variation 111^112 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <112..>262 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 262 BP; 69 A; 58 C; 47 G; 88 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtaccctc ccccaccaga gcatcaagtc 120 tagtgtaact gtttcttctt caaggtgatt tgcattttat tcctgaatgc ctgagggttc 180 tttatttaac cttgaagtta aataccctaa ttaggatgta tcttggtcta ttcattcgga 240 ataaaaaatt cctgccattt tg 262 // ID LN875709; SV 1; linear; genomic DNA; STD; HUM; 248 BP. XX AC LN875709; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 6170 (IKZF1-#295) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-248 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 4e6427b4ced8667540cc12c6b6c672ff. XX FH Key Location/Qualifiers FH FT source 1..248 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 6170 (IKZF1-#295)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>96 FT /gene="IKZF1" FT /number=3 FT variation 96^97 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 97..107 FT /note="additional sequence of 11 nucleotides" FT variation 107^108 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <108..>248 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 248 BP; 64 A; 50 C; 49 G; 85 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtacccag agccggggtg taactgtttc 120 ttcttcaagg tgatttgcat tttattcctg aatgcctgag ggttctttat ttaaccttga 180 agttaaatac cctaattagg atgtatcttg gtctattcat tcggaataaa aaattcctgc 240 cattttgt 248 // ID LN875710; SV 1; linear; genomic DNA; STD; HUM; 261 BP. XX AC LN875710; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 6379 (IKZF1-#320) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-261 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 5bfae847dce74f4d535e4386378b9dc2. XX FH Key Location/Qualifiers FH FT source 1..261 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 6379 (IKZF1-#320)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>101 FT /gene="IKZF1" FT /number=3 FT variation 101^102 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 102..105 FT /note="additional sequence of 4 nucleotides" FT variation 105^106 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <106..>261 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 261 BP; 69 A; 54 C; 47 G; 91 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtacatcc ctcggaacat caagtctagt 120 gtaactgttt cttcttcaag gtgatttgca ttttattcct gaatgcctga gggttcttta 180 tttaaccttg aagttaaata ccctaattag gatgtatctt ggtctattca ttcggaataa 240 aaaattcctg ccattttgtc t 261 // ID LN875711; SV 1; linear; genomic DNA; STD; HUM; 113 BP. XX AC LN875711; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 6607 (IKZF1-#335) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-113 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 9ec93db08343d2c7fb48e3083674b8cc. XX FH Key Location/Qualifiers FH FT source 1..113 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 6607 (IKZF1-#335)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>31 FT /gene="IKZF1" FT /number=3 FT variation 31^32 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 32..38 FT /note="unknown sequence of 7 nucleotides" FT variation 38^39 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <39..>113 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 113 BP; 27 A; 19 C; 22 G; 38 T; 7 other; gacggcatcc agggatctca gaaattatta gnnnnnnnaa acatcaagtc tagtgtaact 60 gtttcttctt caaggtgatt tgcattttat tcctgaatgc ctgagggttc ttt 113 // ID LN875712; SV 1; linear; genomic DNA; STD; HUM; 264 BP. XX AC LN875712; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 6615 (IKZF1-#338), clone 1 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-264 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 0e06745e62ebcc6b020bd2bfcdfcedc4. XX FH Key Location/Qualifiers FH FT source 1..264 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 6615 (IKZF1-#338), clone 1" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>99 FT /gene="IKZF1" FT /number=3 FT variation 99^100 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 100..107 FT /note="additional sequence of 8 nucleotides" FT variation 107^108 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <108..>264 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 264 BP; 70 A; 53 C; 48 G; 93 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtacatct ggttctcgaa acatcaagtc 120 tagtgtaact gtttcttctt caaggtgatt tgcattttat tcctgaatgc ctgagggttc 180 tttatttaac cttgaagtta aataccctaa ttaggatgta tcttggtcta ttcattcgga 240 ataaaaaatt cctgccattt tgtc 264 // ID LN875713; SV 1; linear; genomic DNA; STD; HUM; 391 BP. XX AC LN875713; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 6615 (IKZF1-#338), clone 2 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-391 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 4b896d648cd4b77e9cc8b23333669a8a. XX FH Key Location/Qualifiers FH FT source 1..391 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 6615 (IKZF1-#338), clone 2" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>292 FT /gene="IKZF1" FT /number=3 FT variation 292^293 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 293 FT /note="additional sequence of 1 nucleotide" FT variation 293^294 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <294..>391 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 391 BP; 84 A; 108 C; 80 G; 119 T; 0 other; acagctctca gtgacagtgt cattgaggct aacaaggaca gagtactgct ttcagccacc 60 atttgtccaa tgagtggctg atctccaggc ctctggcttt gagaacatct gtgatatcta 120 aggcagcatc cattgtgggc tttcccccat gcttctgttt ccttcctgtc acatagcttt 180 gcctcctcct gcaagcagcc tgctgtagca gaaccggtgt tcctgaagcc agaaacccaa 240 aggtcgtgtc caatgcttcc ctgctgttct gctccccacc tgcaagcgcc catacatcaa 300 gtctagtgta actgtttctt cttcaaggtg atttgcattt tattcctgaa tgcctgaggg 360 ttctttattt aaccttgaag ttaaataccc t 391 // ID LN875714; SV 1; linear; genomic DNA; STD; HUM; 268 BP. XX AC LN875714; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 6629 (IKZF1-#342) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-268 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 32af28616b3e3b7f467c266039e0cc81. XX FH Key Location/Qualifiers FH FT source 1..268 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 6629 (IKZF1-#342)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>100 FT /gene="IKZF1" FT /number=3 FT variation 100^101 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 101..102 FT /note="additional sequence of 2 nucleotides" FT variation 102^103 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <103..>268 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 268 BP; 74 A; 53 C; 50 G; 91 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtacatcc gagaaacatc aagtctagtg 120 taactgtttc ttcttcaagg tgatttgcat tttattcctg aatgcctgag ggttctttat 180 ttaaccttga agttaaatac cctaattagg atgtatcttg gtctattcat tcggaataaa 240 aaattcctgc cattttgtct agagagtc 268 // ID LN875715; SV 1; linear; genomic DNA; STD; HUM; 257 BP. XX AC LN875715; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 6648 (IKZF1-#343) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-257 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; c0c512b58cbca4e0d4a0c680689662e3. XX FH Key Location/Qualifiers FH FT source 1..257 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 6648 (IKZF1-#343)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>96 FT /gene="IKZF1" FT /number=3 FT variation 96^97 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 97..100 FT /note="additional sequence of 4 nucleotides" FT variation 100^101 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <101..>257 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 257 BP; 69 A; 54 C; 46 G; 88 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtaccccc gaaacatcaa gtctagtgta 120 actgtttctt cttcaaggtg atttgcattt tattcctgaa tgcctgaggg ttctttattt 180 aaccttgaag ttaaataccc taattaggat gtatcttggt ctattcattc ggaataaaaa 240 attcctgcca ttttgtc 257 // ID LN875716; SV 1; linear; genomic DNA; STD; HUM; 260 BP. XX AC LN875716; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 6677 (IKZF1-#345) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-260 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 6acbe17138697367c81cf80049e9be1f. XX FH Key Location/Qualifiers FH FT source 1..260 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 6677 (IKZF1-#345)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>101 FT /gene="IKZF1" FT /number=3 FT variation 101^102 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 102 FT /note="additional sequence of 1 nucleotide" FT variation 102^103 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <103..>260 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 260 BP; 70 A; 52 C; 49 G; 89 T; 0 other; gagtctgtga aggtcacacc ctctggtctt ctcccagccc atagggtata aataatctga 60 attgacggca tccagggatc tcagaaatta ttagtacatc cgggaaacat caagtctagt 120 gtaactgttt cttcttcaag gtgatttgca ttttattcct gaatgcctga gggttcttta 180 tttaaccttg aagttaaata ccctaattag gatgtatctt ggtctattca ttcggaataa 240 aaaattcctg ccattttgtc 260 // ID LN875717; SV 1; linear; genomic DNA; STD; HUM; 152 BP. XX AC LN875717; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 6781 (IKZF1-#355) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-152 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; ba1aedb8ef8614c5496630b81d9dc959. XX FH Key Location/Qualifiers FH FT source 1..152 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 6781 (IKZF1-#355)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>49 FT /gene="IKZF1" FT /number=3 FT variation 49^50 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 50..53 FT /note="unknown sequence of 4 nucleotides" FT variation 53^54 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <54..>152 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 152 BP; 40 A; 28 C; 25 G; 54 T; 5 other; taatctgaat tgacggcatc cagggatctc agaaattatt agtacatccn nnncatcaag 60 tctagtgtaa ctgtttcttc ttcaaggtga tttgcntttt attcctgaat gcctgagggt 120 tctttattta accttgaagt taaataccct aa 152 // ID LN875718; SV 1; linear; genomic DNA; STD; HUM; 253 BP. XX AC LN875718; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 6784 (IKZF1-#356) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-253 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 0921241e264199283045c4b700570ff1. XX FH Key Location/Qualifiers FH FT source 1..253 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 6784 (IKZF1-#356)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>96 FT /gene="IKZF1" FT /number=3 FT variation 96^97 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 97 FT /note="additional sequence of 1 nucleotide" FT variation 97^98 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <98..>253 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 253 BP; 69 A; 49 C; 48 G; 87 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtacggga aacatcaagt ctagtgtaac 120 tgtttcttct tcaaggtgat ttgcatttta ttcctgaatg cctgagggtt ctttatttaa 180 ccttgaagtt aaatacccta attaggatgt atcttggtct attcattcgg aataaaaaat 240 tcctgccatt ttg 253 // ID LN875719; SV 1; linear; genomic DNA; STD; HUM; 259 BP. XX AC LN875719; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 6846 (IKZF1-#361) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-259 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; fca4533ec611aa3e933d6e358a3ceed5. XX FH Key Location/Qualifiers FH FT source 1..259 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 6846 (IKZF1-#361)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>101 FT /gene="IKZF1" FT /number=3 FT variation 101^102 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 102..105 FT /note="additional sequence of 4 nucleotides" FT variation 105^106 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <106..>259 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 259 BP; 69 A; 51 C; 50 G; 89 T; 0 other; gagtctgtga aggtcacacc ctctggtctt ctcccagccc atagggtata aataatctga 60 attgacggca tccagggatc tcagaaatta ttagtacatc cggggaacat caagtctagt 120 gtaactgttt cttcttcaag gtgatttgca ttttattcct gaatgcctga gggttcttta 180 tttaaccttg aagttaaata ccctaattag gatgtatctt ggtctattca ttcggaataa 240 aaaattcctg ccattttgt 259 // ID LN875720; SV 1; linear; genomic DNA; STD; HUM; 249 BP. XX AC LN875720; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 6860 (IKZF1-#362) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-249 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 568d56bc2af66232d0d637eaf7c5eeea. XX FH Key Location/Qualifiers FH FT source 1..249 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 6860 (IKZF1-#362)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>99 FT /gene="IKZF1" FT /number=3 FT variation 99^100 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 100..111 FT /note="additional sequence of 12 nucleotides" FT variation 111^112 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <112..>249 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 249 BP; 66 A; 49 C; 48 G; 86 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtacatcg aaagtctggg cgtaactgtt 120 tcttcttcaa ggtgatttgc attttattcc tgaatgcctg agggttcttt atttaacctt 180 gaagttaaat accctaatta ggatgtatct tggtctattc attcggaata aaaaattcct 240 gccattttg 249 // ID LN875721; SV 1; linear; genomic DNA; STD; HUM; 265 BP. XX AC LN875721; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 6898 (IKZF1-#365) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-265 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 22753bcb138ae9b06c1e10bf5a3665b8. XX FH Key Location/Qualifiers FH FT source 1..265 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 6898 (IKZF1-#365)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>106 FT /gene="IKZF1" FT /number=3 FT variation 106^107 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 107..117 FT /note="additional sequence of 11 nucleotides" FT variation 117^118 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <118..>265 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 265 BP; 72 A; 54 C; 53 G; 86 T; 0 other; gaagtctgga gtctgtgaag gtcacaccct ctggtcttct cccagcccat agggtataaa 60 taatctgaat tgacggcatc cagggatctc agaaattatt agtacacccc aagggggaca 120 tcaagtctag tgtaactgtt tcttcttcaa ggtgatttgc attttattcc tgaatgcctg 180 agggttcttt atttaacctt gaagttaaat accctaatta ggatgtatct tggtctattc 240 attcggaata aaaaattcct gccat 265 // ID LN875722; SV 1; linear; genomic DNA; STD; HUM; 257 BP. XX AC LN875722; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 6924 (IKZF1-#370) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-257 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; aa97ceaf2e7655aedb96ce8423e6e8d2. XX FH Key Location/Qualifiers FH FT source 1..257 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 6924 (IKZF1-#370)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>97 FT /gene="IKZF1" FT /number=3 FT variation 97^98 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 98..104 FT /note="additional sequence of 7 nucleotides" FT variation 104^105 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <105..>257 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 257 BP; 68 A; 51 C; 50 G; 88 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtacacgg ggcgacatca agtctagtgt 120 aactgtttct tcttcaaggt gatttgcatt ttattcctga atgcctgagg gttctttatt 180 taaccttgaa gttaaatacc ctaattagga tgtatcttgg tctattcatt cggaataaaa 240 aattcctgcc attttgt 257 // ID LN875723; SV 1; linear; genomic DNA; STD; HUM; 249 BP. XX AC LN875723; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7012 (IKZF1-#376) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-249 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 65801736701d8c780c8e08dd93d11cdf. XX FH Key Location/Qualifiers FH FT source 1..249 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7012 (IKZF1-#376)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>92 FT /gene="IKZF1" FT /number=3 FT variation 92^93 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <92..>249 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 249 BP; 68 A; 49 C; 44 G; 88 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat taaacatcaa gtctagtgta actgtttctt 120 cttcaaggtg atttgcattt tattcctgaa tgcctgaggg ttctttattt aaccttgaag 180 ttaaataccc taattaggat gtatcttggt ctattcattc ggaataaaaa attcctgcca 240 ttttgtcta 249 // ID LN875724; SV 1; linear; genomic DNA; STD; HUM; 112 BP. XX AC LN875724; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7155 (IKZF1-#395) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-112 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; d7110ab62933a8992b043852403efa0d. XX FH Key Location/Qualifiers FH FT source 1..112 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7155 (IKZF1-#395)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>39 FT /gene="IKZF1" FT /number=3 FT variation 39^40 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 40..41 FT /note="unknown sequence of 2 nucleotides" FT variation 41^42 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <42..>112 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 112 BP; 27 A; 18 C; 22 G; 43 T; 2 other; gaattgatgg catccaggga tctcagaaat tattagtacn ntagtgtaac tgtttcttct 60 tcaaggtgat ttgcatttta ttcctgaatg cctgagggtt ctttatttaa cc 112 // ID LN875725; SV 1; linear; genomic DNA; STD; HUM; 259 BP. XX AC LN875725; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7516 (IKZF1-#437) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-259 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 21c51f05a329fdfa6d9fb31b0905f5bd. XX FH Key Location/Qualifiers FH FT source 1..259 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7516 (IKZF1-#437)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>102 FT /gene="IKZF1" FT /number=3 FT variation 102^103 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <102..>259 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 259 BP; 70 A; 53 C; 47 G; 89 T; 0 other; gagtctgtga aggtcacacc ctctggtctt ctcccagccc atagggtata aataatctga 60 attgacggca tccagggatc tcagaaatta ttagtacatc ccgaaacatc aagtctagtg 120 taactgtttc ttcttcaagg tgatttgcat tttattcctg aatgcctgag ggttctttat 180 ttaaccttga agttaaatac cctaattagg atgtatcttg gtctattcat tcggaataaa 240 aaattcctgc cattttgtc 259 // ID LN875726; SV 1; linear; genomic DNA; STD; HUM; 255 BP. XX AC LN875726; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7173 (IKZF1-#470) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-255 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 1a810259e2bb37b61d74c93959291ad1. XX FH Key Location/Qualifiers FH FT source 1..255 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7173 (IKZF1-#470)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>100 FT /gene="IKZF1" FT /number=3 FT variation 100^101 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 101..102 FT /note="additional sequence of 2 nucleotides" FT variation 102^103 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <103..>255 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 255 BP; 69 A; 51 C; 46 G; 88 T; 1 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtacatcc gnaacatcaa gtctagtgta 120 actgtttctt cttcaaggtg atttgcattt tattcctgaa tgcctgaggg ttctttattt 180 aaccttgaag ttaaataccc taattaggat gtatcttggt ctattcattc ggaataaaaa 240 attcctgcca ttttg 255 // ID LN875727; SV 1; linear; genomic DNA; STD; HUM; 245 BP. XX AC LN875727; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7176 (IKZF1-#405) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-245 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 2ae3d5e19d117e924d4a558641deb742. XX FH Key Location/Qualifiers FH FT source 1..245 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7176 (IKZF1-#405)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>96 FT /gene="IKZF1" FT /number=3 FT variation 96^97 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 97..104 FT /note="additional sequence of 8 nucleotides" FT variation 104^105 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <105..>245 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 245 BP; 63 A; 49 C; 47 G; 86 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtacccgt cagggtgtaa ctgtttcttc 120 ttcaaggtga tttgcatttt attcctgaat gcctgagggt tctttattta accttgaagt 180 taaataccct aattaggatg tatcttggtc tattcattcg gaataaaaaa ttcctgccat 240 tttgt 245 // ID LN875728; SV 1; linear; genomic DNA; STD; HUM; 256 BP. XX AC LN875728; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7208 (IKZF1-#400) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-256 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 294be2b3e76cb7ce2a4604c399aafc40. XX FH Key Location/Qualifiers FH FT source 1..256 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7208 (IKZF1-#400)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>96 FT /gene="IKZF1" FT /number=3 FT variation 96^97 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 97..98 FT /note="additional sequence of 2 nucleotides" FT variation 98^99 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <99..>256 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 256 BP; 70 A; 50 C; 45 G; 91 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtacttaa acatcaagtc tagtgtaact 120 gtttcttctt caaggtgatt tgcattttat tcctgaatgc ctgagggttc tttatttaac 180 cttgaagtta aataccctaa ttaggatgta tcttggtcta ttcattcgga ataaaaaatt 240 cctgccattt tgtcta 256 // ID LN875729; SV 1; linear; genomic DNA; STD; HUM; 257 BP. XX AC LN875729; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7228 (IKZF1-#403) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-257 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 7266e79205f7004006fbc8ebfaf1d297. XX FH Key Location/Qualifiers FH FT source 1..257 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7228 (IKZF1-#403)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>100 FT /gene="IKZF1" FT /number=3 FT variation 100^101 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 101..108 FT /note="additional sequence of 8 nucleotides" FT variation 108^109 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <109..>257 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 257 BP; 69 A; 50 C; 50 G; 88 T; 0 other; gagtctgtga aggtcacacc ctctggtctt ctcccagccc atagggtata aataatctga 60 attgacggca tccagggatc tcagaaatta ttagtacatc ggggacgaat caagtctagt 120 gtaactgttt cttcttcaag gtgatttgca ttttattcct gaatgcctga gggttcttta 180 tttaaccttg aagttaaata ccctaattag gatgtatctt ggtctattca ttcggaataa 240 aaaattcctg ccatttt 257 // ID LN875730; SV 1; linear; genomic DNA; STD; HUM; 257 BP. XX AC LN875730; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7235 (IKZF1-#407) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-257 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 1ee1290d447786a88b5ab2f27b218eae. XX FH Key Location/Qualifiers FH FT source 1..257 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7235 (IKZF1-#407)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>97 FT /gene="IKZF1" FT /number=3 FT variation 97^98 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 98..101 FT /note="additional sequence of 4 nucleotides" FT variation 101^102 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <102..>257 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 257 BP; 70 A; 54 C; 45 G; 88 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtacaccc caaacatcaa gtctagtgta 120 actgtttctt cttcaaggtg atttgcattt tattcctgaa tgcctgaggg ttctttattt 180 aaccttgaag ttaaataccc taattaggat gtatcttggt ctattcattc ggaataaaaa 240 attcctgcca ttttgtc 257 // ID LN875731; SV 1; linear; genomic DNA; STD; HUM; 261 BP. XX AC LN875731; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7267 (IKZF1-#414) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-261 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 23fc9c57a06b9334748fb93b3906b036. XX FH Key Location/Qualifiers FH FT source 1..261 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7267 (IKZF1-#414)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>100 FT /gene="IKZF1" FT /number=3 FT variation 100^101 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 101..104 FT /note="additional sequence of 4 nucleotides" FT variation 104^105 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <105..>261 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 261 BP; 70 A; 53 C; 47 G; 91 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtacatcc ggctaacatc aagtctagtg 120 taactgtttc ttcttcaagg tgatttgcat tttattcctg aatgcctgag ggttctttat 180 ttaaccttga agttaaatac cctaattagg atgtatcttg gtctattcat tcggaataaa 240 aaattcctgc cattttgtct a 261 // ID LN875732; SV 1; linear; genomic DNA; STD; HUM; 255 BP. XX AC LN875732; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7324 (IKZF1-#417) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-255 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; a1d2f22c1d18f556b768571c9ca1898d. XX FH Key Location/Qualifiers FH FT source 1..255 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7324 (IKZF1-#417)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>100 FT /gene="IKZF1" FT /number=3 FT variation 100^101 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 101..102 FT /note="additional sequence of 2 nucleotides" FT variation 102^103 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <103..>255 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 255 BP; 69 A; 51 C; 47 G; 88 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtacatcc ggaacatcaa gtctagtgta 120 actgtttctt cttcaaggtg atttgcattt tattcctgaa tgcctgaggg ttctttattt 180 aaccttgaag ttaaataccc taattaggat gtatcttggt ctattcattc ggaataaaaa 240 attcctgcca ttttg 255 // ID LN875733; SV 1; linear; genomic DNA; STD; HUM; 203 BP. XX AC LN875733; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7423 (IKZF1-#425) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-203 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 0c91abddcdbe67bc7a33b5eab426899e. XX FH Key Location/Qualifiers FH FT source 1..203 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7423 (IKZF1-#425)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>44 FT /gene="IKZF1" FT /number=3 FT variation 44^45 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 45..47 FT /note="additional sequence of 3 nucleotides" FT variation 47^48 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <48..>203 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 203 BP; 56 A; 38 C; 35 G; 74 T; 0 other; gaattgacgg catccaggga tctcagaaat tattagtaca tccccagaca tcaagtctag 60 tgtaactgtt tcttcttcaa ggtgatttgc attttattcc tgaatgcctg agggttcttt 120 atttaacctt gaagttaaat accctaatta ggatgtatct tggtctattc attcggaata 180 aaaaattcct gccattttgt cta 203 // ID LN875734; SV 1; linear; genomic DNA; STD; HUM; 253 BP. XX AC LN875734; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7490 (IKZF1-#434) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-253 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; e95c4b0f80cdb5c7c93c1e516c24edc7. XX FH Key Location/Qualifiers FH FT source 1..253 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7490 (IKZF1-#434)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>98 FT /gene="IKZF1" FT /number=3 FT variation 98^99 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 99 FT /note="additional sequence of 1 nucleotide" FT variation 99^100 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <100..>253 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 253 BP; 69 A; 51 C; 44 G; 89 T; 0 other; tctgtgaagg tcacaccctc tggtcttctc ccagcccata gggtataaat aatctgaatt 60 gacggcatcc agggatctca gaaattatta gtacatccta aacatcaagt ctagtgtaac 120 tgtttcttct tcaaggtgat ttgcatttta ttcctgaatg cctgagggtt ctttatttaa 180 ccttgaagtt aaatacccta attaggatgt atcttggtct attcattcgg aataaaaaat 240 tcctgccatt ttg 253 // ID LN875735; SV 1; linear; genomic DNA; STD; HUM; 186 BP. XX AC LN875735; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7545 (IKZF1-#441) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-186 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; a7e1c53a4a5feadf03127d720cd2c0e4. XX FH Key Location/Qualifiers FH FT source 1..186 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7545 (IKZF1-#441)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>99 FT /gene="IKZF1" FT /number=3 FT variation 99^100 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 100..108 FT /note="additional sequence of 9 nucleotides" FT variation 108^109 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <109..>186 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 186 BP; 47 A; 37 C; 37 G; 65 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtacatct tttaagggca tcaagtctag 120 tgtaactgtt tcttcttcaa ggtgatttgc attttattcc tgaatgcctg agggttcttt 180 atttaa 186 // ID LN875736; SV 1; linear; genomic DNA; STD; HUM; 259 BP. XX AC LN875736; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7686 (IKZF1-#452) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-259 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 8e3e338b44db63d9fa25142fe6c22b20. XX FH Key Location/Qualifiers FH FT source 1..259 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7686 (IKZF1-#452)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>101 FT /gene="IKZF1" FT /number=3 FT variation 101^102 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 102..103 FT /note="additional sequence of 2 nucleotides" FT variation 103^104 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <104..>259 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 259 BP; 71 A; 51 C; 48 G; 89 T; 0 other; gagtctgtga aggtcacacc ctctggtctt ctcccagccc atagggtata aataatctga 60 attgacggca tccagggatc tcagaaatta ttagtacatc cgagaaacat caagtctagt 120 gtaactgttt cttcttcaag gtgatttgca ttttattcct gaatgcctga gggttcttta 180 tttaaccttg aagttaaata ccctaattag gatgtatctt ggtctattca ttcggaataa 240 aaaattcctg ccattttgt 259 // ID LN875737; SV 1; linear; genomic DNA; STD; HUM; 107 BP. XX AC LN875737; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 6277 (IKZF1-#461) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-107 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 12c314e741662bd4f9ac273cce86fd3a. XX FH Key Location/Qualifiers FH FT source 1..107 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 6277 (IKZF1-#461)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>40 FT /gene="IKZF1" FT /number=3 FT variation 40^41 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 41..53 FT /note="unknown sequence of 13 nucleotides" FT gap 41..53 FT /estimated_length=13 FT variation 53^54 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <54..>107 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 107 BP; 25 A; 16 C; 19 G; 34 T; 13 other; gaattgacgg catccaggga tctcagaaat tattagtaca nnnnnnnnnn nnnagtctag 60 tgtaactgtt tcttcttcaa ggtgatttgc attttattcc tgaatgc 107 // ID LN875738; SV 1; linear; genomic DNA; STD; HUM; 256 BP. XX AC LN875738; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7220 (IKZF1-#479) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-256 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; b20a64414d65ac5d0340f6086d03d574. XX FH Key Location/Qualifiers FH FT source 1..256 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7220 (IKZF1-#479)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>97 FT /gene="IKZF1" FT /number=3 FT variation 97^98 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 98..104 FT /note="additional sequence of 7 nucleotides" FT variation 104^105 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <105..>256 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 256 BP; 67 A; 52 C; 49 G; 88 T; 0 other; aagtctgtga aggtcacacc ctctggtctt ctcccagccc atagggtata aataatctga 60 attgacggca tccagggatc tcagaaatta ttagtacccc ggggatcaag tctagtgtaa 120 ctgtttcttc ttcaaggtga tttgcatttt attcctgaat gcctgagggt tctttattta 180 accttgaagt taaataccct aattaggatg tatcttggtc tattcattcg gaataaaaaa 240 ttcctgccat tttgtc 256 // ID LN875739; SV 1; linear; genomic DNA; STD; HUM; 197 BP. XX AC LN875739; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7480 (IKZF1-#483) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-197 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 13b4ea74e6adee63507a7f67042a5d7d. XX FH Key Location/Qualifiers FH FT source 1..197 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7480 (IKZF1-#483)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>43 FT /gene="IKZF1" FT /number=3 FT variation 43^44 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 44..45 FT /note="additional sequence of 2 nucleotides" FT variation 45^46 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <46..>197 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 197 BP; 53 A; 35 C; 34 G; 75 T; 0 other; gaattgacgg catccaggga tctcagaaat tattagtaca tccttcatca agtctagtgt 60 aactgtttct tcttcaaggt gatttgcatt ttattcctga atgcctgagg gttctttatt 120 taaccttgaa gttaaatacc ctaattagga tgtatcttgg tctattcatt cggaataaaa 180 aattcctgcc attttgt 197 // ID LN875740; SV 1; linear; genomic DNA; STD; HUM; 256 BP. XX AC LN875740; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 4949 (IKZF1-#500) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-256 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 9822eb32e35ed37cd3ad918a9c87cbf6. XX FH Key Location/Qualifiers FH FT source 1..256 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 4949 (IKZF1-#500)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>101 FT /gene="IKZF1" FT /number=3 FT variation 101^102 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 102..105 FT /note="additional sequence of 4 nucleotides" FT variation 105^106 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <106..>256 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 256 BP; 68 A; 51 C; 49 G; 88 T; 0 other; gagtctgtga aggtcacacc ctctggtctt ctcccagccc atagggtata aataatctga 60 attgacggca tccagggatc tcagaaatta ttagtacatc cggagcatca agtctagtgt 120 aactgtttct tcttcaaggt gatttgcatt ttattcctga atgcctgagg gttctttatt 180 taaccttgaa gttaaatacc ctaattagga tgtatcttgg tctattcatt cggaataaaa 240 aattcctgcc attttg 256 // ID LN875741; SV 1; linear; genomic DNA; STD; HUM; 256 BP. XX AC LN875741; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5995 (IKZF1-#509) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-256 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; a4a453bdc5f4b2453d8f8b1b6cd36c6a. XX FH Key Location/Qualifiers FH FT source 1..256 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5995 (IKZF1-#509)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-7" FT /db_xref="taxon:9606" FT intron <1..>96 FT /gene="IKZF1" FT /number=3 FT variation 96^97 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT misc_feature 97..101 FT /note="additional sequence of 5 nucleotides" FT variation 101^102 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-7 IKZF1" FT intron <102..>256 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 256 BP; 68 A; 52 C; 46 G; 90 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtaccctt gaacatcaag tctagtgtaa 120 ctgtttcttc ttcaaggtga tttgcatttt attcctgaat gcctgagggt tctttattta 180 accttgaagt taaataccct aattaggatg tatcttggtc tattcattcg gaataaaaaa 240 ttcctgccat tttgtc 256 // ID LN875742; SV 1; linear; genomic DNA; STD; HUM; 180 BP. XX AC LN875742; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 3396 (IKZF1-#46) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-180 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 4c08c804315f63f74d898f5c9cf388d6. XX FH Key Location/Qualifiers FH FT source 1..180 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 3396 (IKZF1-#46)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>36 FT /gene="IKZF1" FT /number=3 FT variation 36^37 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 37..50 FT /note="additional sequence of 14 nucleotides" FT variation 50^51 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <51..>180 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 180 BP; 39 A; 51 C; 45 G; 45 T; 0 other; agaagtctgg agtctgtgaa ggtcacaccc tctggtgggg gataatctgg cctgtatgcc 60 gagacatgct tgggatctcc tagctccaca ctctgtctct catgagtctg agccctttgg 120 gtttctgtga cttccagtcc cctcctgcca gtagcaacct acaaaacaga aaccgagacg 180 // ID LN875743; SV 1; linear; genomic DNA; STD; HUM; 253 BP. XX AC LN875743; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 3408 (IKZF1-#49) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-253 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 9a7a221b6726464f367909485511b3ce. XX FH Key Location/Qualifiers FH FT source 1..253 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 3408 (IKZF1-#49)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>98 FT /gene="IKZF1" FT /number=3 FT variation 98^99 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 99..101 FT /note="additional sequence of 3 nucleotides" FT variation 101^102 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <102..>253 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 253 BP; 58 A; 73 C; 54 G; 68 T; 0 other; gtctgtgaag gtcacaccct ctggtcttct cccagcccat agggtataaa taatctgaat 60 tgacggcatc cagggatctc agaaattatt agtacatcgg actgacatgc tggctctctt 120 ccctgtatgc cgagacatgc ttgggatctc ctagctccac actctgtctc tcatgagtct 180 gagccctttg ggtttctgtg acttccagtc ccctcctgcc agtagcaacc tacaaaacag 240 aaaccgagac gtg 253 // ID LN875744; SV 1; linear; genomic DNA; STD; HUM; 260 BP. XX AC LN875744; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 3600 (IKZF1-#59) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-260 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 64f128b97acb37a3a92effa0b666cac6. XX FH Key Location/Qualifiers FH FT source 1..260 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 3600 (IKZF1-#59)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>102 FT /gene="IKZF1" FT /number=3 FT variation 102^103 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 103..104 FT /note="additional sequence of 2 nucleotides" FT variation 104^105 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <105..>260 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 260 BP; 59 A; 76 C; 56 G; 69 T; 0 other; gagtctgtga aggtcacacc ctctggtctt ctcccagccc atagggtata aataatctga 60 attgacggca tccagggatc tcagaaatta ttagtacatc cccatgggct gacatgctgg 120 ctctcttccc tgtatgccga gacatgcttg ggatctccta gctccacact ctgtctctca 180 tgagtctgag ccctttgggt ttctgtgact tccagtcccc tcctgccagt agcaacctac 240 aaaacagaaa ccgagacgtg 260 // ID LN875745; SV 1; linear; genomic DNA; STD; HUM; 214 BP. XX AC LN875745; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 4548 (IKZF1-#97) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-214 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 233391d70e3eade45a234d916e83fac5. XX FH Key Location/Qualifiers FH FT source 1..214 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 4548 (IKZF1-#97)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>68 FT /gene="IKZF1" FT /number=3 FT variation 68^69 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 69..72 FT /note="additional sequence of 4 nucleotides" FT variation 72^73 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <73..>214 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 214 BP; 45 A; 65 C; 47 G; 57 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcgt cgggctctct tccctgtatg ccgagacatg cttgggatct cctagctcca 120 cactctgtct ctcatgagtc tgagcccttt gggtttctgt gacttccagt cccctcctgc 180 cagtagcaac ctacaaaaca gaaaccgaga cgtg 214 // ID LN875746; SV 1; linear; genomic DNA; STD; HUM; 158 BP. XX AC LN875746; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 4649 (IKZF1-#101), clone 1 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-158 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 78e2bfc482972a0f1d43802e43c542a7. XX FH Key Location/Qualifiers FH FT source 1..158 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 4649 (IKZF1-#101), clone 1" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>61 FT /gene="IKZF1" FT /number=3 FT variation 61^62 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 62..71 FT /note="additional sequence of 10 nucleotides" FT variation 71^72 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <72..>158 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 158 BP; 30 A; 46 C; 39 G; 43 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 tccgacggcg ggtgggctga catgctggct ctcttccctg tatgccgaga catgcttggg 120 atctcctagc tccacactct gtctctcatg agtctgag 158 // ID LN875747; SV 1; linear; genomic DNA; STD; HUM; 140 BP. XX AC LN875747; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 4649 (IKZF1-#101), clone 2 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-140 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; a9629f10296281410b53447857b6ef19. XX FH Key Location/Qualifiers FH FT source 1..140 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 4649 (IKZF1-#101), clone 2" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>39 FT /gene="IKZF1" FT /number=3 FT variation 39^40 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 40..45 FT /note="additional sequence of 6 nucleotides" FT variation 45^46 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <46..>140 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 140 BP; 48 A; 27 C; 26 G; 39 T; 0 other; gaattgacgg catccaggga tctcagaaat tattagtact cccaaatcaa gggtctacgt 60 ggaatagtgc ttttccacag agtagctact agccacacat ggctatttca atttacatta 120 taatgaaata gaattgaaac 140 // ID LN875748; SV 1; linear; genomic DNA; STD; HUM; 167 BP. XX AC LN875748; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5334 (IKZF1-#108) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-167 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; c3dad673168da2ea648fe3324069d7ff. XX FH Key Location/Qualifiers FH FT source 1..167 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5334 (IKZF1-#108)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>43 FT /gene="IKZF1" FT /number=3 FT variation 43^44 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 44..46 FT /note="additional sequence of 3 nucleotides" FT variation 46^47 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <47..>167 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 167 BP; 31 A; 50 C; 36 G; 50 T; 0 other; gaattgacgg catccaggga tctcagaaat tattagtaca tccataggct gacatgctgg 60 ctctcttccc tgtatgccga gacatgcttg ggatctccta gctccacact ctgtctctca 120 tgagtctgag ccctttgggt ttctgtgact tccagtcccc tcctgcc 167 // ID LN875749; SV 1; linear; genomic DNA; STD; HUM; 125 BP. XX AC LN875749; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5356 (IKZF1-#111), clone 1 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-125 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 27cd7626d0a52b76e09cf31505e07ac4. XX FH Key Location/Qualifiers FH FT source 1..125 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5356 (IKZF1-#111), clone 1" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>30 FT /gene="IKZF1" FT /number=3 FT variation 30^31 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 31..41 FT /note="unknown sequence of 11 nucleotides" FT gap 31..41 FT /estimated_length=11 FT variation 41^42 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <42..>125 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 125 BP; 21 A; 35 C; 25 G; 33 T; 11 other; taatctgaat tgacggcatc cagggatctc nnnnnnnnnn ntgacatgct ggctctcttc 60 cctgtatgcc gagacatgct tgggatctcc tagctccaca ctctgtctct catgagtctg 120 agccc 125 // ID LN875750; SV 1; linear; genomic DNA; STD; HUM; 479 BP. XX AC LN875750; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5356 (IKZF1-#111), clone 2 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-479 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 2d7a3d717d71920fa22696fe2cd83b3b. XX FH Key Location/Qualifiers FH FT source 1..479 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5356 (IKZF1-#111), clone 2" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>42 FT /gene="IKZF1" FT /number=3 FT variation 42^43 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 43..51 FT /note="additional sequence of 9 nucleotides" FT variation 51^52 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <52..>479 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 479 BP; 127 A; 117 C; 103 G; 132 T; 0 other; gaattgacgg catccaggga tctcagaaat tattagtaca tcagggtatt atgtttcttt 60 ctttccccac atcaagggtc tacgtggaat agtgcttttc cacagagtag ctactagcca 120 cacatggcta tttcaattta cattataatg aaatagaatt gaaacttcag cccttcagtt 180 gtactagcca tattccaggt gttctatcag cagatgtgac tgtacccacc atattggaca 240 gcacaaatgt ggaagcagac gtttccattg ttgtagaagg ctctgtcggg aagtgctgat 300 gacatgccag tacctgcctt gctccctgga gctccccaag gtctagcaca gtgcctggca 360 caaggtgagg ggggtgccca gaaaagattc aattccctct ccaagtaaac cattcattcc 420 cagcttcccc aaagaagtct tccctggggt actaaatcct gaaggctgcc ttcagtatt 479 // ID LN875751; SV 1; linear; genomic DNA; STD; HUM; 255 BP. XX AC LN875751; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 4851 (IKZF1-#123) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-255 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 8e4672edb3931aed14f81699c434d060. XX FH Key Location/Qualifiers FH FT source 1..255 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 4851 (IKZF1-#123)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>90 FT /gene="IKZF1" FT /number=3 FT variation 90^91 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 91..100 FT /note="additional sequence of 10 nucleotides" FT variation 100^101 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <101..>255 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 255 BP; 56 A; 76 C; 56 G; 67 T; 0 other; ggagtctgtg aaggtcacac cctctggtct tctcccagcc catagggtat aaataatctg 60 aattgacggc atccagggat ctcagaaatt ctccttgcga gctgacatgc tggctctctt 120 ccctgtatgc cgagacatgc ttgggatctc ctagctccac actctgtctc tcatgagtct 180 gagccctttg ggtttctgtg acttccagtc ccctcctgcc agtagcaacc tacaaaacag 240 aaaccgagac gtgca 255 // ID LN875752; SV 1; linear; genomic DNA; STD; HUM; 257 BP. XX AC LN875752; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 4879 (IKZF1-#127) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-257 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 9020eeb32085abbce5197e05b08d34a7. XX FH Key Location/Qualifiers FH FT source 1..257 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 4879 (IKZF1-#127)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>102 FT /gene="IKZF1" FT /number=3 FT variation 102^103 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 103 FT /note="additional sequence of 1 nucleotide" FT variation 103^104 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <104..>257 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 257 BP; 58 A; 76 C; 55 G; 68 T; 0 other; gagtctgtga aggtcacacc ctctggtctt ctcccagccc atagggtata aataatctga 60 attgacggca tccagggatc tcagaaatta ttagtacatc cccggctgac atgctggctc 120 tcttccctgt atgccgagac atgcttggga tctcctagct ccacactctg tctctcatga 180 gtctgagccc tttgggtttc tgtgacttcc agtcccctcc tgccagtagc aacctacaaa 240 acagaaaccg agacgtg 257 // ID LN875753; SV 1; linear; genomic DNA; STD; HUM; 159 BP. XX AC LN875753; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5035 (IKZF1-#139) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-159 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; b0bb7a5ac8802ae5afc6735ca67de795. XX FH Key Location/Qualifiers FH FT source 1..159 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5035 (IKZF1-#139)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>79 FT /gene="IKZF1" FT /number=3 FT variation 79^80 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 80..86 FT /note="additional sequence of 7 nucleotides" FT variation 86^87 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <87..>159 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 159 BP; 44 A; 43 C; 35 G; 37 T; 0 other; tcttagaagt ctggagtctg tgaaggtcac accctctggt cttctcccag cccatagggt 60 ataaataatc tgaattgacc cagggagttt ctgtgacttc cagtcccctc ctgccagtag 120 caacctacaa aacagaaacc gagacgtgca atagcagga 159 // ID LN875754; SV 1; linear; genomic DNA; STD; HUM; 227 BP. XX AC LN875754; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5067 (IKZF1-#143) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-227 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; c8b9c7f71ef9af47d75798846389b9b7. XX FH Key Location/Qualifiers FH FT source 1..227 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5067 (IKZF1-#143)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>83 FT /gene="IKZF1" FT /number=3 FT variation 83^84 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 84..87 FT /note="additional sequence of 4 nucleotides" FT variation 87^88 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <88..>227 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 227 BP; 49 A; 70 C; 47 G; 61 T; 0 other; gagtctgtga aggtcacacc ctctggtctt ctcccagccc atagggtata aataatctga 60 attgacggca tccagggatc tcacttcctc tcttccctgt atgccgagac atgcttggga 120 tctcctagct ccacactctg tctctcatga gtctgagccc tttgggtttc tgtgacttcc 180 agtcccctcc tgccagtagc aacctacaaa acagaaaccg agacgtg 227 // ID LN875755; SV 1; linear; genomic DNA; STD; HUM; 254 BP. XX AC LN875755; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5156 (IKZF1-#154) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-254 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; eb78ffe4802281a34b82fe165c360007. XX FH Key Location/Qualifiers FH FT source 1..254 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5156 (IKZF1-#154)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>97 FT /gene="IKZF1" FT /number=3 FT variation 97^98 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 98..99 FT /note="additional sequence of 2 nucleotides" FT variation 99^100 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <100..>254 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 254 BP; 58 A; 75 C; 54 G; 67 T; 0 other; gagtctgtga aggtcacacc ctctggtctt ctcccagccc atagggtata aataatctga 60 attgacggca tccagggatc tcagaaatta ttagtacccg ctgacatgct ggctctcttc 120 cctgtatgcc gagacatgct tgggatctcc tagctccaca ctctgtctct catgagtctg 180 agccctttgg gtttctgtga cttccagtcc cctcctgcca gtagcaacct acaaaacaga 240 aaccgagacg tgca 254 // ID LN875756; SV 1; linear; genomic DNA; STD; HUM; 124 BP. XX AC LN875756; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5216 (IKZF1-#160) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-124 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 1f68c265fe6ba5a628d888ecbef16587. XX FH Key Location/Qualifiers FH FT source 1..124 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5216 (IKZF1-#160)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>39 FT /gene="IKZF1" FT /number=3 FT variation 39^40 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 40..46 FT /note="unknown sequence of 7 nucleotides" FT variation 46^47 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <47..>124 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 124 BP; 25 A; 32 C; 26 G; 34 T; 7 other; gaattgacgg catccaggga tctcagaaat tattagtacn nnnnnngctg acatgctggc 60 tctcttccct gtatgccgag acatgcttgg gatctcctag ctccacactc tgtctctcat 120 gagt 124 // ID LN875757; SV 1; linear; genomic DNA; STD; HUM; 142 BP. XX AC LN875757; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5275 (IKZF1-#175) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-142 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 577b5819f32aadb1f4e88dbd00fd3ed4. XX FH Key Location/Qualifiers FH FT source 1..142 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5275 (IKZF1-#175)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>46 FT /gene="IKZF1" FT /number=3 FT variation 46^47 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 47..61 FT /note="unknown sequence of 15 nucleotides" FT gap 47..61 FT /estimated_length=15 FT variation 61^62 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <62..>142 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 142 BP; 27 A; 35 C; 27 G; 38 T; 15 other; tctgaattga cggcatccag ggatctcaga aattattagt acatccnnnn nnnnnnnnnn 60 ntgacatgct ggctctcttc cctgtatgcc gagacatgct tgggatctcc tagctccaca 120 ctctgtctct catgagtctg ag 142 // ID LN875758; SV 1; linear; genomic DNA; STD; HUM; 135 BP. XX AC LN875758; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5394 (IKZF1-#189) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-135 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; a9c6fefcb22de82fb394b2e3b9f15c54. XX FH Key Location/Qualifiers FH FT source 1..135 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5394 (IKZF1-#189)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>44 FT /gene="IKZF1" FT /number=3 FT variation 44^45 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 45..47 FT /note="unknown sequence of 3 nucleotides" FT variation 47^48 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <48..>135 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 135 BP; 27 A; 37 C; 30 G; 38 T; 3 other; tctgaattga cggcatccag ggatctcaga aattattagt acatnnnggg ctgacatgct 60 ggctctcttc cctgtatgcc gagacatgct tgggatctcc tagctccaca ctctgtctct 120 catgagtctg agccc 135 // ID LN875759; SV 1; linear; genomic DNA; STD; HUM; 264 BP. XX AC LN875759; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5415 (IKZF1-#191) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-264 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 790087b4e676068584fe488484864975. XX FH Key Location/Qualifiers FH FT source 1..264 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5415 (IKZF1-#191)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>101 FT /gene="IKZF1" FT /number=3 FT variation 101^102 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 102..107 FT /note="additional sequence of 6 nucleotides" FT variation 107^108 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <108..>264 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 264 BP; 60 A; 75 C; 61 G; 68 T; 0 other; gagtctgtga aggtcacacc ctctggtctt ctcccagccc atagggtata aataatctga 60 attgacggca tccagggatc tcagaaatta ttagtacatc cggagggggg ctgacatgct 120 ggctctcttc cctgtatgcc gagacatgct tgggatctcc tagctccaca ctctgtctct 180 catgagtctg agccctttgg gtttctgtga cttccagtcc cctcctgcca gtagcaacct 240 acaaaacaga aaccgagacg tgca 264 // ID LN875760; SV 1; linear; genomic DNA; STD; HUM; 221 BP. XX AC LN875760; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5553 (IKZF1-#210) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-221 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 63247e328457289c165217c014d9e891. XX FH Key Location/Qualifiers FH FT source 1..221 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5553 (IKZF1-#210)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>89 FT /gene="IKZF1" FT /number=3 FT variation 89^90 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 90..94 FT /note="additional sequence of 5 nucleotides" FT variation 94^95 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <95..>221 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 221 BP; 44 A; 66 C; 46 G; 64 T; 1 other; gaaggtcaca ccctctggtc ttctcccagc ccatagggta taaataatct gaattgacgg 60 catccaggga tctcagaaat tattagtact cccatgggct gacatgctgg ctctcttccc 120 tgtatgccga gacatgcttg ggatctccta gctccacact ctgtctctca tgagtctgag 180 ccctttgggt ttctgtgact tccantcccc tcctgccagt a 221 // ID LN875761; SV 1; linear; genomic DNA; STD; HUM; 256 BP. XX AC LN875761; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5735 (IKZF1-#243) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-256 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; a032551515840e92dadb80eb00bafbe6. XX FH Key Location/Qualifiers FH FT source 1..256 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5735 (IKZF1-#243)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>97 FT /gene="IKZF1" FT /number=3 FT variation 97^98 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 98..100 FT /note="additional sequence of 3 nucleotides" FT variation 100^101 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <101..>256 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 256 BP; 58 A; 74 C; 56 G; 68 T; 0 other; gagtctgtga aggtcacacc ctctggtctt ctcccagccc atagggtata aataatctga 60 attgacggca tccagggatc tcagaaatta ttagtaccca tgggctgaca tgctggctct 120 cttccctgta tgccgagaca tgcttgggat ctcctagctc cacactctgt ctctcatgag 180 tctgagccct ttgggtttct gtgacttcca gtcccctcct gccagtagca acctacaaaa 240 cagaaaccga gacgtg 256 // ID LN875762; SV 1; linear; genomic DNA; STD; HUM; 258 BP. XX AC LN875762; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 6133 (IKZF1-#289) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-258 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 58ec92f6cb60f5564dc459cb30e7fc28. XX FH Key Location/Qualifiers FH FT source 1..258 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 6133 (IKZF1-#289)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>96 FT /gene="IKZF1" FT /number=3 FT variation 96^97 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 97..103 FT /note="additional sequence of 7 nucleotides" FT variation 103^104 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <104..>258 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 258 BP; 61 A; 77 C; 53 G; 67 T; 0 other; agtctgtgaa ggtcacaccc tctggtcttc tcccagccca tagggtataa ataatctgaa 60 ttgacggcat ccagggatct cagaaattat tagtaccccc aaagctgaca tgctggctct 120 cttccctgta tgccgagaca tgcttgggat ctcctagctc cacactctgt ctctcatgag 180 tctgagccct ttgggtttct gtgacttcca gtcccctcct gccagtagca acctacaaaa 240 cagaaaccga gacgtgca 258 // ID LN875763; SV 1; linear; genomic DNA; STD; HUM; 136 BP. XX AC LN875763; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 6830 (IKZF1-#360), clone 1 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-136 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; d2226c6c1654f752a04c747c79f00cc9. XX FH Key Location/Qualifiers FH FT source 1..136 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 6830 (IKZF1-#360), clone 1" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>43 FT /gene="IKZF1" FT /number=3 FT variation 43^44 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 44..50 FT /note="additional sequence of 7 nucleotides" FT variation 50^51 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <51..>136 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 136 BP; 29 A; 36 C; 33 G; 37 T; 1 other; gaattgacgg catccaggga tctcagaaat tattantaca tccggggaca tgggctgaca 60 tgctggctct cttccctgta tgccgagaca tgcttgggat ctcctagctc cacactctgt 120 ctctcatgag tctgag 136 // ID LN875764; SV 1; linear; genomic DNA; STD; HUM; 159 BP. XX AC LN875764; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 6830 (IKZF1-#360), clone 2 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-159 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 0c793dc7ce7b0cdd10bcd0e709982111. XX FH Key Location/Qualifiers FH FT source 1..159 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 6830 (IKZF1-#360), clone 2" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>78 FT /gene="IKZF1" FT /number=3 FT variation 78^79 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 79..81 FT /note="additional sequence of 3 nucleotides" FT variation 81^82 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <82..>159 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 159 BP; 32 A; 47 C; 38 G; 42 T; 0 other; gagtctgtga aggtcacacc ctctggtctt ctcccagccc atagggtata aataatctga 60 attgacggca tccagggaag ggctggctct cttccctgta tgccgagaca tgcttgggat 120 ctcctagctc cacactctgt ctctcatgag tctgagccc 159 // ID LN875765; SV 1; linear; genomic DNA; STD; HUM; 131 BP. XX AC LN875765; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 6898 (IKZF1-#365) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-131 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 1abadb28c0750bb5c07dfde2e2faac48. XX FH Key Location/Qualifiers FH FT source 1..131 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 6898 (IKZF1-#365)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>42 FT /gene="IKZF1" FT /number=3 FT variation 42^43 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 43..46 FT /note="additional sequence of 4 nucleotides" FT variation 46^47 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <47..>131 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 131 BP; 27 A; 36 C; 31 G; 37 T; 0 other; tctgaattga cggcatccag ggatctcaga aattattagt acccaggggc tgacatgctg 60 gctctcttcc ctgtatgccg agacatgctt gggatctcct agctccacac tctgtctctc 120 atgagtctga g 131 // ID LN875766; SV 1; linear; genomic DNA; STD; HUM; 136 BP. XX AC LN875766; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7155 (IKZF1-#395) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-136 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 7b6ca20ed041d75495696a69a001d8be. XX FH Key Location/Qualifiers FH FT source 1..136 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7155 (IKZF1-#395)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>46 FT /gene="IKZF1" FT /number=3 FT variation 46^47 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 47..48 FT /note="unknown sequence of 2 nucleotides" FT variation 48^49 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <49..>136 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 136 BP; 27 A; 38 C; 30 G; 38 T; 3 other; tctgaattga nggcatccag ggatctcaga aattattagt acatccnngg gctgacatgc 60 tggctctctt ccctgtatgc cgagacatgc ttgggatctc ctagctccac actctgtctc 120 tcatgagtct gagccc 136 // ID LN875767; SV 1; linear; genomic DNA; STD; HUM; 123 BP. XX AC LN875767; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7208 (IKZF1-#400) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-123 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 68bb646abf371784610c2d321d793e74. XX FH Key Location/Qualifiers FH FT source 1..123 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7208 (IKZF1-#400)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>43 FT /gene="IKZF1" FT /number=3 FT variation 43^44 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 44 FT /note="unknown sequence of 1 nucleotide" FT variation 44^45 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <45..>123 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 123 BP; 26 A; 33 C; 28 G; 35 T; 1 other; tctgaattga cggcatccag ggatctcaga aattattagt acangggctg acatgctggc 60 tctcttccct gtatgccgag acatgcttgg gatctcctag ctccacactc tgtctctcat 120 gag 123 // ID LN875768; SV 1; linear; genomic DNA; STD; HUM; 258 BP. XX AC LN875768; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7234 (IKZF1-#406) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-258 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 7eb81057dbe2db974a4a65ef56b237b4. XX FH Key Location/Qualifiers FH FT source 1..258 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7234 (IKZF1-#406)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>97 FT /gene="IKZF1" FT /number=3 FT variation 97^98 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 98..102 FT /note="additional sequence of 5 nucleotides" FT variation 102^103 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <103..>258 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 258 BP; 58 A; 76 C; 56 G; 68 T; 0 other; gagtctgtga aggtcacacc ctctggtctt ctcccagccc atagggtata aataatctga 60 attgacggca tccagggatc tcagaaatta ttagtacccc catgggctga catgctggct 120 ctcttccctg tatgccgaga catgcttggg atctcctagc tccacactct gtctctcatg 180 agtctgagcc ctttgggttt ctgtgacttc cagtcccctc ctgccagtag caacctacaa 240 aacagaaacc gagacgtg 258 // ID LN875769; SV 1; linear; genomic DNA; STD; HUM; 246 BP. XX AC LN875769; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7719 (IKZF1-#469) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-246 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 26de20f4b54dea6fa36c6f673aa03691. XX FH Key Location/Qualifiers FH FT source 1..246 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7719 (IKZF1-#469)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>100 FT /gene="IKZF1" FT /number=3 FT variation 100^101 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 101..116 FT /note="additional sequence of 16 nucleotides" FT variation 116^117 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <117..>246 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 246 BP; 56 A; 76 C; 51 G; 63 T; 0 other; gagtctgtga aggtcacacc ctctggtctt ctcccagccc atagggtata aataatctga 60 attgacggca tccagggatc tcagaaatta ttagtacatc tcctcccccc ccgccgtgta 120 tgccgagaca tgcttgggat ctcctagctc cacactctgt ctctcatgag tctgagccct 180 ttgggtttct gtgacttcca gtcccctcct gccagtagca acctacaaaa cagaaaccga 240 gacgtg 246 // ID LN875770; SV 1; linear; genomic DNA; STD; HUM; 453 BP. XX AC LN875770; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7173 (IKZF1-#470), clone 1 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-453 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 84cbda4cbe2324db04d5191d8a0c3851. XX FH Key Location/Qualifiers FH FT source 1..453 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7173 (IKZF1-#470), clone 1" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>43 FT /gene="IKZF1" FT /number=3 FT variation 43^44 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 44..50 FT /note="additional sequence of 7 nucleotides" FT variation 50^51 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <51..>453 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 453 BP; 123 A; 113 C; 100 G; 117 T; 0 other; gaattgacgg catccaggga tctcagaaat tattagtaca tcctccagag tcaagggtct 60 acgtggaata gtgcttttcc acagagtagc tactagccac acatggctat ttcaatttac 120 attataatga aatagaattg aaacttcagc ccttcagttg tactagccat attccaggtg 180 ttctatcagc agatgtgact gtacccacca tattggacag cacaaatgtg gaagcagacg 240 tttccattgt tgtagaaggc tctgtcggga agtgctgatg acatgccagt acctgccttg 300 ctccctggag ctccccaagg tctagcacag tgcctggcac aaggtgaggg gggtgcccag 360 aaaagattca attccctctc caagtaaacc attcattccc agcttcccca aagaagtctt 420 ccctggggta ctaaatcctg aaggctgcct tca 453 // ID LN875771; SV 1; linear; genomic DNA; STD; HUM; 116 BP. XX AC LN875771; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7173 (IKZF1-#470), clone 2 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-116 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; edfa171bfba1ed108b0250a40579e7cd. XX FH Key Location/Qualifiers FH FT source 1..116 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7173 (IKZF1-#470), clone 2" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>34 FT /gene="IKZF1" FT /number=3 FT variation 34^35 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 35..41 FT /note="unknown sequence of 7 nucleotides" FT variation 41^42 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <42..>116 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 116 BP; 22 A; 29 C; 27 G; 31 T; 7 other; gggtataaat aatctgaatt gacggcatcc agggnnnnnn ngctggctct cttccctgta 60 tgccgagaca tgcttgggat ctcctagctc cacactctgt ctctcatgag tctgag 116 // ID LN875772; SV 1; linear; genomic DNA; STD; HUM; 220 BP. XX AC LN875772; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7173 (IKZF1-#470), clone 3 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-220 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 08508b26a4c2bfce1610ed69dc362136. XX FH Key Location/Qualifiers FH FT source 1..220 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7173 (IKZF1-#470), clone 3" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>68 FT /gene="IKZF1" FT /number=3 FT variation 68^69 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 69..75 FT /note="additional sequence of 7 nucleotides" FT variation 75^76 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <76..>220 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 220 BP; 45 A; 68 C; 49 G; 58 T; 0 other; gagtctgtga aggtcacacc ctctggtctt ctcccagccc atagggtata aataatctga 60 attgacggcc ctcgggctgg ctctcttccc tgtatgccga gacatgcttg ggatctccta 120 gctccacact ctgtctctca tgagtctgag ccctttgggt ttctgtgact tccagtcccc 180 tcctgccagt agcaacctac aaaacagaaa ccgagacgtg 220 // ID LN875773; SV 1; linear; genomic DNA; STD; HUM; 679 BP. XX AC LN875773; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 4399 (IKZF1-#495) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-679 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 98d9ada752e0ca8bcaa01d6e61166c0f. XX FH Key Location/Qualifiers FH FT source 1..679 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 4399 (IKZF1-#495)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 4-8" FT /db_xref="taxon:9606" FT intron <1..>36 FT /gene="IKZF1" FT /number=3 FT variation 36^37 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature 37..43 FT /note="additional sequence of 7 nucleotides" FT variation 43^44 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 4-8 IKZF1" FT misc_feature <44..>679 FT /gene="IKZF1" FT /note="downstream of IKZF1 3' UTR" XX SQ Sequence 679 BP; 160 A; 182 C; 149 G; 188 T; 0 other; gaattgacgg catccaggga tctcagaaat tattagcccc cggtctttct ttccccacat 60 caagggtcta cgtggaatag tgcttttcca cagagtagct actagccaca catggctatt 120 tcaatttaca ttataatgaa atagaattga aacttcagcc cttcagttgt actagccata 180 ttccaggtgt tctatcagca gatgtgactg tacccaccat attggacagc acaaatgtgg 240 aagcagacgt ttccattgtt gtagaaggct ctgtcgggaa gtgctgatga catgccagta 300 cctgccttgc tccctggagc tccccaaggt ctagcacagt gcctggcaca aggtgagggg 360 ggtgcccaga aaagattcaa ttccctctcc aagtaaacca ttcattccca gcttccccaa 420 agaagtcttc cctggggtac taaatcctga aggctgcctt cagtattcga agcatgcagc 480 aactttcact tcttcttttt cgacctggcc cttcactctg cctgagaggg aaatgtcact 540 tgcctgagga catgtgcttt ttctcaagca ggcacactgg tccctttcaa ggtgtgggct 600 gacatgctgg ctctcttccc tgtatgccga gacatgcttg ggatctccta gctccacact 660 ctgtctctca tgagtctga 679 // ID LN875774; SV 1; linear; genomic DNA; STD; HUM; 551 BP. XX AC LN875774; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 5641 (IKZF1-#225) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-551 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; c88773cc5e2b77b8c7b11a294f52857f. XX FH Key Location/Qualifiers FH FT source 1..551 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 5641 (IKZF1-#225)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 5-7" FT /db_xref="taxon:9606" FT intron <1..>472 FT /gene="IKZF1" FT /number=4 FT variation 472^473 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="deletion breakpoint" FT /note="microdeletion leading to loss of exons 5-7 IKZF1" FT intron <472..>551 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 551 BP; 173 A; 97 C; 110 G; 171 T; 0 other; ttgggaaaat gatgacgatg acttgaaatc agaccctcgt atgctgcttc cgtgggggcg 60 aacaaaaata tgttcatcaa aaattaagca gaaatgcaga aaattttgtg agccaaaaaa 120 gctgtgttat caggaaatgc agatatttgt ggggttgtaa ttttttatat ttgaatcggg 180 cggttttcaa aatgatctat tccatttgta gtgtatctga agacctataa aaataagttg 240 atatcaatag atatccatct tccataaaaa ttcaacttct aaaattaagc aaactttgct 300 ttttctaatg gcccctttat cctcaaatta cccactgaaa tagacggatc acactcagcc 360 ctaagtgaag caagcgtgca tgagagtagt cccagcctcg cctttgtaat gaggtggaaa 420 ttaacatgaa ggtaggctac cctgtgatag acacttaaca ggatactcgg ggacatcaag 480 tctagtgtaa ctgtttcttc ttcaaggtga tttgcatttt attcctgaat gcctgagggt 540 tctttattta a 551 // ID LN875775; SV 1; linear; genomic DNA; STD; HUM; 541 BP. XX AC LN875775; XX DT 04-JAN-2016 (Rel. 127, Created) DT 04-OCT-2017 (Rel. 134, Last updated, Version 3) XX DE Homo sapiens sequence, leukemia patient 7409 (IKZF1-#424) XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-541 RA Burmeister T.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL CHARITE, Charite, CBF, Medizinische Klinik fuer, Haematologie, Onkologie,, RL Hindenburgdamm 30, 12200 Berlin, GERMANY. XX RN [2] RX DOI; .3324/haematol.2016.161273. RX PUBMED; 28751559. RA Kobitzsch B., Gokbuget N., Schwartz S., Reinhardt R., Bruggemann M., RA Viardot A., Wasch R., Starck M., Thiel E., Hoelzer D., Burmeister T.; RT "Loss-of-function but not dominant-negative intragenic IKZF1 deletions are RT associated with an adverse prognosis in adult BCR-ABL-negative acute RT lymphoblastic leukemia"; RL Haematologica 102(10):1739-1747(2017). XX DR MD5; 202b9e83c039f5ec30da85fd9f0ee28e. XX FH Key Location/Qualifiers FH FT source 1..541 FT /organism="Homo sapiens" FT /chromosome="7" FT /map="7p12" FT /isolate="patient 7409 (IKZF1-#424)" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /note="DNA from a patient with acute lymphoblastic B-cell FT precursor leukemia; carrying a IKZF1 (7p12) microdeletion FT leading to loss of exons 5-7" FT /db_xref="taxon:9606" FT intron <1..>461 FT /gene="IKZF1" FT /number=4 FT variation 461^462 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="proximal deletion breakpoint" FT /note="microdeletion leading to loss of exons 5-7 IKZF1" FT misc_feature 462..470 FT /note="additional sequence of 9 nucleotides" FT variation 470^471 FT /phenotype="acute lymphoblastic B-cell precursor leukemia" FT /note="distal deletion breakpoint" FT /note="microdeletion leading to loss of exons 5-7 IKZF1" FT intron <471..>541 FT /gene="IKZF1" FT /number=7 XX SQ Sequence 541 BP; 170 A; 96 C; 107 G; 168 T; 0 other; aaaggcctag cagattctat aagatacctt gggaaaatga tgacgatgac ttgaaatcag 60 accctcgtat gctgcttccg tgggggcgaa caaaaatatg ttcatcaaaa attaagcaga 120 aatgcagaaa attttgtgag ccaaaaaagc tgtgttatca ggaaatgcag atatttgtgg 180 ggttgtaatt ttttatattt gaatcgggcg gttttcaaaa tgatctattc catttgtagt 240 gtatctgaaa acctataaaa ataagttgat atcaatagat atccatcttc cataaaaatt 300 caacttctaa aattaagcaa actttgcttt ttctaatggc ccctttatcc tcaaattacc 360 cactgaaata gacggatcac actcagccct aagtgaagca agcgtgcatg agagtagtcc 420 cagcctcgcc tttgtaatga ggtggaaatt aacatgaagg tttccggggc tcaagtctag 480 tgtaactgtt tcttcttcaa ggtgatttgc attttattcc tgaatgcctg agggttcttt 540 a 541 // ID LN875779; SV 1; linear; genomic DNA; STD; HUM; 257 BP. XX AC LN875779; XX DT 20-AUG-2015 (Rel. 125, Created) DT 20-AUG-2015 (Rel. 125, Last updated, Version 1) XX DE Homo sapiens partial HLA-DRB1 gene for MHC class II antigen, allele DE HLA-DRB1**14, exon 1 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-257 RA Cappuzzo V.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL Immunogenetica, A.O. Ospedali Riuniti Villa Sofia-Cervello, 90146, Palermo, RL ITALY. XX RN [2] RA Cappuzzo V.C., Ingrassia F.I.; RT "Caracterization of a new HLA DRB1 allele"; RL Unpublished. XX DR MD5; 8382957d285bb7fab73833143818d207. DR IMGT/HLA; HLA-DRB1*14:172; HLA14621. XX FH Key Location/Qualifiers FH FT source 1..257 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT exon 1..257 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1**14" FT /number=1 FT CDS <42..>257 FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1**14" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A0K3AYW4" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR014745" FT /db_xref="UniProtKB/TrEMBL:A0A0K3AYW4" FT /protein_id="CTQ87353.1" FT /translation="NGTERVRFLDRYFHNQEEFVRFDSDVGEYRAVTELGRPAAEHWNS FT QKDLLERRRAEVXTYCRHNYGVVESFT" XX SQ Sequence 257 BP; 51 A; 62 C; 93 G; 50 T; 1 other; cacgtttctt ggagtactct acgtctgagt gtcatttctt caatgggacg gagcgggtgc 60 ggttcctgga cagatacttc cataaccagg aggagttcgt gcgcttcgac agcgacgtgg 120 gggagtaccg ggcggtgacg gagctggggc ggcctgctgc ggagcactgg aacagccaga 180 aggacctcct ggagcggagg cgggccgagg tggncaccta ttgcagacac aactacgggg 240 ttgtggagag cttcaca 257 // ID LN875780; SV 1; linear; genomic DNA; STD; HUM; 652 BP. XX AC LN875780; XX DT 20-SEP-2015 (Rel. 126, Created) DT 20-SEP-2015 (Rel. 126, Last updated, Version 1) XX DE Homo sapiens partial HLA-DQB1 gene for MHC class II antigen, allele DE HLA-DQB1*03 new, exons 2-3 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-652 RA Schuett S.; RT ; RL Submitted (20-JUL-2015) to the INSDC. RL HLA-Labor, Institut fuer Medizinische Diagnostik, Nicolaistrasse 22, RL Berlin, 12247, GERMANY. XX RN [2] RA Schuett S., Von Baehr V., Ortmann S., Nagy M.; RT "Sequenced-based typing of a novel HLA-DQB1*03 allele"; RL Unpublished. XX DR MD5; 35fd3031f087c0460d2a93ccc469f6ad. DR IMGT/HLA; HLA-DQB1*03:206; HLA13993. XX FH Key Location/Qualifiers FH FT source 1..652 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT CDS join(<1..270,371..>652) FT /codon_start=3 FT /transl_table=1 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03 new" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A0M7B520" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A0M7B520" FT /protein_id="CTQ87354.1" FT /translation="DFVYQFKAMCYFTNGTERVRYVTRYIYNREEYARFDSDVEVYRAV FT TPLGPPDAEYWNSQKEVLERTRAELDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEAL FT NHHNLLVCSVTDFYPAQIKVRWFRNDQEETTGVVSTPLIRNGDWTFQILVMMEMTPQHG FT DVYTCHVEHPSLQNPITVEW" FT exon 1..270 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03 new" FT /number=2 FT intron 271..370 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03 new" FT /number=2 FT exon 371..652 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03 new" FT /number=3 XX SQ Sequence 652 BP; 129 A; 164 C; 162 G; 97 T; 100 other; aggatttcgt gtaccagttt aaggccatgt gctacttcac caacgggacg gagcgcgtgc 60 gttatgtgac cagatacatc tataaccgag aggagtacgc acgcttcgac agcgacgtgg 120 aggtgtaccg ggcggtgacg ccgctggggc cgcctgacgc cgagtactgg aacagccaga 180 aggaagtcct ggagaggacc cgggcggagt tggacacggt gtgcagacac aactaccagt 240 tggagctccg cacgaccttg cagcggcgag nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn tggagcccac agtgaccatc tccccatcca ggacagaggc cctcaaccac 420 cacaacctgc tggtctgctc agtgacagat ttctatccag cccagatcaa agtccggtgg 480 tttcggaatg accaggagga gacaaccggc gttgtgtcca ccccccttat taggaacggt 540 gactggacct tccagatcct ggtgatgatg gaaatgactc cccagcatgg agacgtctac 600 acctgccacg tggagcaccc cagcctccag aaccccatca ccgtggagtg gc 652 // ID LN875781; SV 1; linear; genomic DNA; STD; HUM; 646 BP. XX AC LN875781; XX DT 13-AUG-2015 (Rel. 125, Created) DT 13-AUG-2015 (Rel. 125, Last updated, Version 1) XX DE Homo sapiens partial HLA-C gene for MHC class I antigen, allele HLA-C*03, DE exons 2-3 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-646 RA Elsermans V.; RT ; RL Submitted (21-JUL-2015) to the INSDC. RL CHRU Lille, Institut d'Immunologie-HLA, Boulevard du Pr. J. Leclercq, 59037 RL LILLE cedex, Nord, FRANCE. XX RN [2] RA Elsermans V., Top I., Farchi O., Varlet P., Labalette M.; RT "A novel HLA-C allele identified by sequence-based typing in a French HSC RT volunteer donor"; RL Unpublished. XX DR MD5; 442d7d90ce4d512cb51ef77261653def. DR IMGT/HLA; HLA-C*03:302; HLA14095. XX FH Key Location/Qualifiers FH FT source 1..646 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT CDS join(<1..270,371..>646) FT /codon_start=3 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*03" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A0K3ATK6" FT /protein_id="CTQ87355.1" FT /translation="SHSMRYFYTAVSRPGRGEPHFIAVGYVDDTQFVRFDSDAASPRGE FT PRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRNLRGYYNQSEAGSHTLQWMCGCDLGP FT DGRLLRGYDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQLRAYLEGLC FT VEWLRRYLKNGKETLQRA" FT exon 1..270 FT /gene="HLA-C" FT /allele="HLA-C*03" FT /number=2 FT exon 371..646 FT /gene="HLA-C" FT /allele="HLA-C*03" FT /number=3 XX SQ Sequence 646 BP; 104 A; 168 C; 200 G; 74 T; 100 other; gctcccactc catgaggtat ttctacaccg ctgtgtcccg gcccggccgc ggggagcccc 60 acttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120 cgagtccgag aggggagccg cgggcgccgt gggtggagca ggaggggccg gagtattggg 180 accgggagac acagaagtac aagcgccagg cacagactga ccgagtgagc ctgcggaacc 240 tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn ggtctcacac cctccagtgg atgtgtggct gcgacctggg gcccgacggg 420 cgcctcctcc gcgggtatga ccagtacgcc tacgacggca aggattacat cgccctgaac 480 gaggatctgc gctcctggac cgccgcggac acggcggctc agatcaccca gcgcaagtgg 540 gaggcggccc gtgaggcgga gcagctgaga gcctacctgg agggcctgtg cgtggagtgg 600 ctccgcagat acctgaagaa tgggaaggag acgctgcagc gcgcgg 646 // ID LN875782; SV 1; linear; genomic DNA; STD; HUM; 1678 BP. XX AC LN875782; XX DT 13-AUG-2015 (Rel. 125, Created) DT 13-AUG-2015 (Rel. 125, Last updated, Version 1) XX DE Homo sapiens genomic DNA for DARC pseudogene, isolate 2014-004087, null DE allele FY*02.151delT XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1678 RA Henny C.; RT ; RL Submitted (21-JUL-2015) to the INSDC. RL Research and Development, Blood Transfusion Service SRC Bern Ltd., RL Murtenstrasse 133, , 3008 Bern, SWITZERLAND. XX RN [2] RC Supplement 1, June 2015.Abstract for 25th Regional Congress of the RC International Society of Blood Transfusion. Abstract Number P-578 RA Henny C., Lejon Crottet S., Niederhauser C., Hustinx H.; RT "A PATIENT OF CAUCASIAN ORIGIN WITH AN APPARENT FY(A-B-) PHENOTYPE"; RL Vox Sang. 109:P-578-P-578(2015). XX DR MD5; 323bc1050c65e529d22683f41db09048. XX FH Key Location/Qualifiers FH FT source 1..1678 FT /organism="Homo sapiens" FT /isolate="2014-004087" FT /mol_type="genomic DNA" FT /tissue_type="blood" FT /db_xref="taxon:9606" FT exon <1..162 FT /gene="DARC" FT /allele="FY*02.151delT" FT /number=1 FT CDS join(142..162,642..1627) FT /codon_start=1 FT /transl_table=1 FT /gene="DARC" FT /allele="FY*02.151delT" FT /note="Duffy antigen/atypical chemokine receptor" FT /pseudogene="allelic" FT intron 163..641 FT /gene="DARC" FT /allele="FY*02.151delT" FT /number=1 FT exon 642..1678 FT /gene="DARC" FT /allele="FY*02.151delT" FT /number=2 FT misc_feature 771 FT /gene="DARC" FT /allele="FY*02.151delT" FT /number=1 FT /note="151delT, deletion of nucleotide T after nucleotide FT at position 770. This deletion leads to a frameshift with FT an aberrant protein sequence starting from amino acid 51 FT and a premature stop codon at position 74." XX SQ Sequence 1678 BP; 240 A; 560 C; 398 G; 480 T; 0 other; gcgtggggta aggcttcctg atgccccctg tccctgccca gaacctgatg gccctcatta 60 gtccttggct cttatcttgg aagcacaggc gctgacagcc gtcccagccc ttctgtctgc 120 gggcctgaac caaacggtgc catggggaac tgtctgcaca gggtgagtat ggggccaggc 180 cccagagtcc cttatcccta tgcccctcat ttcccctgct gtttgcccct cagtctttat 240 atctcttcct tttcctcctc atcttttctc ccttcctgct tttttcctct tccttcaaag 300 tctttttcct tttctccttc ctatgctagc ctcctagctc cctcttgtgt ccctcccttt 360 gcctttgagt cagttccatc ctggtctctt ggtgcctttc cttctgacct tgcactgctc 420 ctccagcccc agctgccctg gcttccccag gactgttcct gctccggctc ttcaggctcc 480 ctgctttgtc cttttccact gtccgcactg catctgactc ctgcagagac cttgttctcc 540 cacccgacct tcctctctgt cctcccctcc cacctgcccc tcaattccca ggagactctt 600 ccggtgtaac tctgatggcc tcctctgggt atgtcctcca ggcggagctc tccccctcaa 660 ctgagaactc aagtcagctg gacttcgaag atgtatggaa ttcttcctat ggtgtgaatg 720 attccttccc agatggagac tatgatgcca acctggaagc agctgccccc gccactcctg 780 taacctgctg gatgactctg cactgccctt cttcatcctc accagtgtcc tgggtatcct 840 agctagcagc actgtcctct tcatgctttt cagacctctc ttccgctggc agctctgccc 900 tggctggcct gtcctgacac agctggctgt gggcagtgcc ctcttcagca ttgtggtgcc 960 cgtcttggcc ccagggctag gtagcactcg cagctctgcc ctgtgtagcc tgggctactg 1020 tgtctggtat ggctcagcct ttgcccaggc tttgctgcta gggtgccatg cctccctggg 1080 ccacagactg ggtgcaggcc aggtcccagg cctcaccctg gggctcactg tgggaatttg 1140 gggagtggct gccctactga cactgcctgt caccctggcc agtggtgctt ctggtggact 1200 ctgcaccctg atatacagca cggagctgaa ggctttgcag gccacacaca ctgtagcctg 1260 tcttgccatc tttgtcttgt tgccattggg tttgtttgga gccaaggggc tgaagaaggc 1320 attgggtatg gggccaggcc cctggatgaa tatcctgtgg gcctggttta ttttctggtg 1380 gcctcatggg gtggttctag gactggattt cctggtgagg tccaagctgt tgctgttgtc 1440 aacatgtctg gcccagcagg ctctggacct gctgctgaac ctggcagaag ccctggcaat 1500 tttgcactgt gtggctacgc ccctgctcct cgccctattc tgccaccagg ccacccgcac 1560 cctcttgccc tctctgcccc tccctgaagg atggtcttct catctggaca cccttggaag 1620 caaatcctag ttctcttccc acctgtcaac ctgaattaaa gtctacactg cctttgtg 1678 // ID LN877294; SV 2; linear; genomic DNA; STD; HUM; 3311 BP. XX AC LN877294; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*39:06:02 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3311 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 239958ba6e2b5784064285c7b1ce9593. DR IMGT/HLA; HLA-B*39:06:02:01; HLA00280. XX FH Key Location/Qualifiers FH FT source 1..3311 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300101" FT /db_xref="taxon:9606" FT CDS join(285..357,486..755,1001..1276,1849..2124,2218..2334, FT 2776..2808,2915..2958) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:I3ZN83" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:I3ZN83" FT /protein_id="CUA55037.1" FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQICKTNTQTDRESLRN FT LRGYYNQSEAGSHTWQTMYGCDVGPDGRLLRGHNQFAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRTYLEGTCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=1 FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=2 FT intron 756..1000 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=2 FT exon 1001..1276 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=3 FT intron 1277..1848 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=3 FT exon 1849..2124 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=4 FT intron 2125..2217 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=4 FT exon 2218..2334 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=5 FT intron 2335..2775 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=5 FT exon 2776..2808 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=6 FT intron 2809..2914 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=6 FT exon 2915..>2958 FT /gene="HLA-B" FT /allele="HLA-B*39:06:02" FT /number=7 XX SQ Sequence 3311 BP; 621 A; 962 C; 1036 G; 692 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccctgagtt tcacttcttc 120 tcccaacttg tgtcgggtcc ttcttccagg atactcgtga cgcatcccca cttcccactc 180 ccattgggtg tcggatatct agagaagcca atcagcgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagagtct cctcagacgc cgagatgctg gtcatggcgc 300 cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc gggagggaaa tggcctctgc cgggaggagc gaggggaccg caggcggggg 420 cgcaggacct gaggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcta cacctccgtg tcccggcccg gccgcgggga 540 gccccgcttc atctcagtgg gctacgtgga cgacacgcag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggaata 660 ttgggaccgg aacacacaga tctgcaagac caacacacag actgaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg ggacggggct gaccgcgggg ccggggccag ggtctcacac ttggcagacg 1020 atgtatggct gcgacgtggg gccggacggg cgcctcctcc gcgggcataa ccagttcgcc 1080 tacgacggca aggattacat cgccctgaac gaggacctga gctcctggac cgcggcggac 1140 accgcggctc agatcaccca gcgcaagtgg gaggcggccc gtgtggcgga gcagctgaga 1200 acctacctgg agggcacgtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag 1260 acgctgcagc gcgcgggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc 1320 cggggatggc ctccaacgag aagaagagga aaatgggatc agcgctagaa tgtcgccctc 1380 ccttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc 1440 taggacaatt aagggatgac gtctctgagg aaatggaggg gaagacagtc cctagaatac 1500 tgatcagggg tcccctttga cccctgcagc agccttggga accatgactt ttcctctcag 1560 gccttgttct ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc 1620 actttacctc cactcagatc aggagcagaa gtctctgttc cccgctcaga gactcgaact 1680 ttccaatgaa tagattatcc caggtgcctg cgtccaggct ggtgtctggg ttctgtgccc 1740 cttccccacc ccaggtgtcc tgtccattct caggctggtc acatgggtgg tcctagggtg 1800 tcccatgaga gatgcaaagc gcctgaattt tctgactctt cccatcagac cccccaaaga 1860 cacatgtgac ccaccacccc atctctgacc atgaggccac cctgaggtgc tgggccctgg 1920 gcttctaccc tgcggagatc acactgacct ggcagcggga tggcgaggac caaactcagg 1980 acaccgagct tgtggagacc agaccagcag gagacagaac cttccagaag tgggcagctg 2040 tggtggtgcc ttctggagaa gagcagagat acacatgcca tgtacagcat gaggggctgc 2100 cgaagcccct caccctgaga tggggtaagg agggggatga ggggtcatat ctcttctcag 2160 ggaaagcagg agcccttcag cagggtcagg gcccctcatc ttcccctcct ttcccagagc 2220 catcttccca gtccaccgtc cccatcgtgg gcattgttgc tggcctggct gtcctagcag 2280 ttgtggtcat cggagctgtg gtcgctgctg tgatgtgtag gaggaagagt tcaggtaggg 2340 aaggggtgag gggtggggtc tgggttttct tgtcccactg ggggtttcaa gccccaggta 2400 gaagtgttcc ctgcatcatt actgggaagc agcatgcaca caggggctaa cgcagcctgg 2460 gaccctgtgt gccagcactt actcttttgt gcagcacatg tgacaatgaa ggacggatgt 2520 atcaccttga tggttgtggt gttggggtcc tgattccagc attcatgagt caggggaagg 2580 tccctgctaa ggacagacct taggagggca gttggtccag gacccacact tgctttcctc 2640 gtgtttcctg atcctgccct gggtctgtag tcatacttct ggaaattcct tttgggtcca 2700 agactaggag gttcctctaa gatctcatgg ccctgcttcc tcccagtccc ctcacaggac 2760 attttcttcc cacaggtgga aaaggaggga gctactctca ggctgcgtgt aagtggtggg 2820 ggtgggagtg tggaggagct cacccacccc ataattcctc ctgtcccacg tctcctgtgg 2880 gctctgacca ggtcctgttt ttgttctact ccagccagcg acagtgccca gggctctgat 2940 gtgtctctca cagcttgaaa aggtgagatt cttggggtct agagtgggcg ggggggcggg 3000 gagggggcag aggggaaagg cctgggtaat ggagattctt tgattgggat gtttcgcgtg 3060 tgtgatgggc tgttcagagt gtcatcactt accatgacta accagaattt gttcatgact 3120 gttgttttct gtagcctgag acagctgtct tgtgagggac tgagatgcag gatttcttca 3180 cgcctcccct ttgtgacttc aagagcctct ggcatctctt tctgcaaagg cacctgaatg 3240 tgtctgcgtc cctgttagca taatgtgagg aggtggagag acagcccacc cttgtgtcca 3300 ctgtgacccc t 3311 // ID LN877295; SV 2; linear; genomic DNA; STD; HUM; 3299 BP. XX AC LN877295; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-A gene for MHC class I antigen, allele HLA-A*03new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3299 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 56d35241e4120839e2089850cdc8717a. DR IMGT/HLA; HLA-A*03:231:01; HLA14076. XX FH Key Location/Qualifiers FH FT source 1..3299 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300101" FT /db_xref="taxon:9606" FT CDS join(301..373,504..773,1015..1290,1869..2144,2247..2363, FT 2806..2838,2981..3028,3198..3202) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-A" FT /allele="HLA-A*03new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A0S4XR96" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A0S4XR96" FT /protein_id="CUA55038.1" FT /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGT FT LRGYYNQSEAGSHTIQIMYGCDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMA FT AQITKRKWEAARRAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRK FT GGSYTQAASSDSAQGSDVSLTACKV" FT exon <301..373 FT /gene="HLA-A" FT /allele="HLA-A*03:231" FT /number=1 FT intron 374..503 FT /gene="HLA-A" FT /allele="HLA-A*03:231" FT /number=1 FT exon 504..773 FT /gene="HLA-A" FT /allele="HLA-A*03:231" FT /number=2 FT intron 774..1014 FT /gene="HLA-A" FT /allele="HLA-A*03:231" FT /number=2 FT exon 1015..1290 FT /gene="HLA-A" FT /allele="HLA-A*03:231" FT /number=3 FT intron 1291..1868 FT /gene="HLA-A" FT /allele="HLA-A*03:231" FT /number=3 FT exon 1869..2144 FT /gene="HLA-A" FT /allele="HLA-A*03:231" FT /number=4 FT intron 2145..2246 FT /gene="HLA-A" FT /allele="HLA-A*03:231" FT /number=4 FT exon 2247..2363 FT /gene="HLA-A" FT /allele="HLA-A*03:231" FT /number=5 FT intron 2364..2805 FT /gene="HLA-A" FT /allele="HLA-A*03:231" FT /number=5 FT exon 2806..2838 FT /gene="HLA-A" FT /allele="HLA-A*03:231" FT /number=6 FT intron 2839..2980 FT /gene="HLA-A" FT /allele="HLA-A*03:231" FT /number=6 FT exon 2981..3028 FT /gene="HLA-A" FT /allele="HLA-A*03:231" FT /number=7 FT intron 3029..3197 FT /gene="HLA-A" FT /allele="HLA-A*03:231" FT /number=7 FT exon 3198..>3202 FT /gene="HLA-A" FT /allele="HLA-A*03:231" FT /number=8 XX SQ Sequence 3299 BP; 628 A; 954 C; 1023 G; 694 T; 0 other; caggagcaga ggggtcaggg cgaagtccca gggccccagg cgtggctctc agagtctcag 60 gccccgaagg cggtgtatgg attggggagt cccagccttg gggattcccc aactccgcag 120 tttcttttct ccctctccca acctacgtag ggtccttcat cctggatact cacgacgcgg 180 acccagttct cactcccatt gggtgtcggg tttccagaga agccaatcag tgtcgtcgcg 240 gtcgctgttc taaagcccgc acgcacccac cgggactcag attctcccca gacgccgagg 300 atggccgtca tggcgccccg aaccctcctc ctgctactct cgggggccct ggccctgacc 360 cagacctggg cgggtgagtg cggggtcggg agggaaaccg cctctgcggg gagaagcaag 420 gggccctcct ggcgggggcg caggaccggg ggagccgcgc cgggacgagg gtcgggcagg 480 tctcagccac tgctcgcccc caggctccca ctccatgagg tatttcttca catccgtgtc 540 ccggcccggc cgcggggagc cccgcttcat cgccgtgggc tacgtggacg acacgcagtt 600 cgtgcggttc gacagcgacg ccgcgagcca gaggatggag ccgcgggcgc cgtggataga 660 gcaggagggg ccggagtatt gggaccagga gacacggaat gtgaaggccc agtcacagac 720 tgaccgagtg gacctgggga ccctgcgcgg ctactacaac cagagcgagg ccggtgagtg 780 accccggccg ggggcgcagg tcaggacccc tcatccccca cggacgggcc aggtcgccca 840 cagtctccgg gtccgagatc caccccgaag ccgcgggacc ccgagaccct tgccccggga 900 gaggcccagg cgcctttacc cggtttcatt ttcagtttag gccaaaaatc cccccgggtt 960 ggtcggggct gggcggggct cgggggactg ggctgaccgc ggggtcgggg ccaggttctc 1020 acaccatcca gataatgtat ggctgcgacg tggggtcgga cgggcgcttc ctccgcgggt 1080 accggcagga cgcctacgac ggcaaggatt acatcgccct gaacgaggac ctgcgctcct 1140 ggaccgcggc ggacatggca gctcagatca ccaagcgcaa gtgggaggcg gcccgtcggg 1200 cggagcagct gagagcctac ctggatggca cgtgcgtgga gtggctccgc agatacctgg 1260 agaacgggaa ggagacgctg cagcgcacgg gtaccagggg ccacggggcg cctccctgat 1320 cgcctgtaga tctcccgggc tggcctccca caaggagggg agacaattgg gaccaacact 1380 agaatatcac cctccctctg gtcctgaggg agaggaatcc tcctgggttc cagatcctgt 1440 accagagagt gactctgagg ttccgccctg ctctctgaca caattaaggg ataaaatctc 1500 tgaaggagtg acgggaagac gatccctcga atactgatga gtggttccct ttgacaccgg 1560 cagcagcctt gggcccgtga cttttcctct caggccttgt tctctgcttc acactcaatg 1620 tgtgtggggg tctgagtcca gcacttctga gtccctcagc ctccactcag gtcaggacca 1680 gaagtcgctg ttcccttctc agggaataga agattatccc aggtgcctgt gtccaggctg 1740 gtgtctgggt tctgtgctct cttccccatc ccgggtgtcc tgtccattct caagatggcc 1800 acatgcgtgc tggtggagtg tcccatgaca gatgcaaaat gcctgaattt tctgactctt 1860 cccgtcagac ccccccaaga cacatatgac ccaccacccc atctctgacc atgaggccac 1920 cctgaggtgc tgggccctgg gcttctaccc tgcggagatc acactgacct ggcagcggga 1980 tggggaggac cagacccagg acacggagct cgtggagacc aggcctgcag gggatggaac 2040 cttccagaag tgggcggctg tggtggtgcc ttctggagag gagcagagat acacctgcca 2100 tgtgcagcat gagggtctgc ccaagcccct caccctgaga tggggtaagg agggagatgg 2160 gggtgtcatg tctcttaggg aaagcaggag cctctctgga gacctttagc agggtcaggg 2220 cccctcacct tcccctcttt tcccagagct gtcttcccag cccaccatcc ccatcgtggg 2280 catcattgct ggcctggttc tccttggagc tgtgatcact ggagctgtgg tcgctgccgt 2340 gatgtggagg aggaagagct caggtggaga aggggtgaag ggtggggtct gagatttctt 2400 gtctcactga gggttccaag ccccagctag aaatgtgccc tgtctcatta ctgggaagca 2460 ccgtccacaa tcatgggcct acccagtctg ggccctgtgt gccagcactt actcttttgt 2520 aaagcacctg ttaaaatgaa ggacagattt atcaccttga ttacggcggt gatgggacct 2580 gatcccagca gtcacaagtc acaggggaag gtccctgagg acagacctca ggagggctat 2640 tggtccagga cccacacctg ctttcttcat gtttcctgat cccgccctgg gtctgcagtc 2700 acacatttct ggaaacttct ctggggtcca agactaggag gttcctctag gaccttaagg 2760 ccctggctcc tttctggtat ctcacaggac attttcttct cacagataga aaaggaggga 2820 gttacactca ggctgcaagt aagtatgaag gaggctgatg cctgaggtcc ttgggatatt 2880 gtgtttggga gcccatgggg gagcccaccc acctcacaat tcctcctcta gccacatctt 2940 ctgtgggatc tgaccaggtt ctgtttttgt tctaccccag gcagtgacag tgcccagggc 3000 tctgatgtgt ccctcacagc ttgtaaaggt gagagcttgg aggacctaat gtgtgttggg 3060 tgttgggcgg aacagtggac acagctgtgc tatggggttt ctttgcattg gatgtattga 3120 gcatgcgatg ggctgtttaa ggtgtgaccc ctcactgtga tggatatgaa tttgttcatg 3180 aatatttttt tctatagtgt gagacagctg ccttgtgtgg gactgagagg caagagttgt 3240 tcctgccctt ccctttgtga cttgaagaac cctgactttg tttctgcaaa ggcacctgc 3299 // ID LN877296; SV 2; linear; genomic DNA; STD; HUM; 3299 BP. XX AC LN877296; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-A gene for MHC class I antigen, allele HLA-A*03new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3299 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 1e24eecb53b52c407e8bcc87a5fa3e3f. DR IMGT/HLA; HLA-A*03:89:02; HLA14077. XX FH Key Location/Qualifiers FH FT source 1..3299 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300102" FT /db_xref="taxon:9606" FT CDS join(301..373,504..773,1015..1290,1869..2144,2247..2363, FT 2806..2838,2981..3028,3198..3202) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-A" FT /allele="HLA-A*03new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A1D0C3Y2" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A1D0C3Y2" FT /protein_id="CUA55039.1" FT /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGT FT LRGYYNQSEAGSHTIQIMYGCDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMA FT AQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRK FT GGSYTQAASSDSAQGSDVSLTACKV" FT exon <301..373 FT /gene="HLA-A" FT /allele="HLA-A*03:89:02" FT /number=1 FT intron 374..503 FT /gene="HLA-A" FT /allele="HLA-A*03:89:02" FT /number=1 FT exon 504..773 FT /gene="HLA-A" FT /allele="HLA-A*03:89:02" FT /number=2 FT intron 774..1014 FT /gene="HLA-A" FT /allele="HLA-A*03:89:02" FT /number=2 FT exon 1015..1290 FT /gene="HLA-A" FT /allele="HLA-A*03:89:02" FT /number=3 FT intron 1291..1868 FT /gene="HLA-A" FT /allele="HLA-A*03:89:02" FT /number=3 FT exon 1869..2144 FT /gene="HLA-A" FT /allele="HLA-A*03:89:02" FT /number=4 FT intron 2145..2246 FT /gene="HLA-A" FT /allele="HLA-A*03:89:02" FT /number=4 FT exon 2247..2363 FT /gene="HLA-A" FT /allele="HLA-A*03:89:02" FT /number=5 FT intron 2364..2805 FT /gene="HLA-A" FT /allele="HLA-A*03:89:02" FT /number=5 FT exon 2806..2838 FT /gene="HLA-A" FT /allele="HLA-A*03:89:02" FT /number=6 FT intron 2839..2980 FT /gene="HLA-A" FT /allele="HLA-A*03:89:02" FT /number=6 FT exon 2981..3028 FT /gene="HLA-A" FT /allele="HLA-A*03:89:02" FT /number=7 FT intron 3029..3197 FT /gene="HLA-A" FT /allele="HLA-A*03:89:02" FT /number=7 FT exon 3198..>3202 FT /gene="HLA-A" FT /allele="HLA-A*03:89:02" FT /number=8 XX SQ Sequence 3299 BP; 629 A; 952 C; 1023 G; 695 T; 0 other; caggagcaga ggggtcaggg cgaagtccca gggccccagg cgtggctctc agagtctcag 60 gccccgaagg cggtgtatgg attggggagt cccagccttg gggattcccc aactccgcag 120 tttcttttct ccctctccca acctacgtag ggtccttcat cctggatact cacgacgcgg 180 acccagttct cactcccatt gggtgtcggg tttccagaga agccaatcag tgtcgtcgcg 240 gtcgctgttc taaagcccgc acgcacccac cgggactcag attctcccca gacgccgagg 300 atggccgtca tggcgccccg aaccctcctc ctgctactct cgggggccct ggccctgacc 360 cagacctggg cgggtgagtg cggggtcggg agggaaaccg cctctgcggg gagaagcaag 420 gggccctcct ggcgggggcg caggaccggg ggagccgcgc cgggacgagg gtcgggcagg 480 tctcagccac tgctcgcccc caggctccca ctccatgagg tatttcttca catccgtgtc 540 ccggcccggc cgcggggagc cccgcttcat cgccgtgggc tacgtggacg acacgcagtt 600 cgtgcggttc gacagcgacg ccgcgagcca gaggatggag ccgcgggcgc cgtggataga 660 gcaggagggg ccggagtatt gggacgggga gacacggaaa gtgaaggccc actcacagac 720 tcaccgagtg gacctgggga ccctgcgcgg ctactacaac cagagcgagg ccggtgagtg 780 accccggccg ggggcgcagg tcaggacccc tcatccccca cggacgggcc aggtcgccca 840 cagtctccgg gtccgagatc caccccgaag ccgcgggacc ccgagaccct tgccccggga 900 gaggcccagg cgcctttacc cggtttcatt ttcagtttag gccaaaaatc cccccgggtt 960 ggtcggggct gggcggggct cgggggactg ggctgaccgc ggggtcgggg ccaggttctc 1020 acaccatcca gataatgtat ggctgcgacg tggggtcgga cgggcgcttc ctccgcgggt 1080 accggcagga cgcctacgac ggcaaggatt acatcgccct gaacgaggac ctgcgctctt 1140 ggaccgcggc ggacatggcg gctcagatca ccaagcgcaa gtgggaggcg gcccatgagg 1200 cggagcagtt gagagcctac ctggatggca cgtgcgtgga gtggctccgc agatacctgg 1260 agaacgggaa ggagacgctg cagcgcacgg gtaccagggg ccacggggcg cctccctgat 1320 cgcctgtaga tctcccgggc tggcctccca caaggagggg agacaattgg gaccaacact 1380 agaatatcac cctccctctg gtcctgaggg agaggaatcc tcctgggttc cagatcctgt 1440 accagagagt gactctgagg ttccgccctg ctctctgaca caattaaggg ataaaatctc 1500 tgaaggagtg acgggaagac gatccctcga atactgatga gtggttccct ttgacaccgg 1560 cagcagcctt gggcccgtga cttttcctct caggccttgt tctctgcttc acactcaatg 1620 tgtgtggggg tctgagtcca gcacttctga gtccctcagc ctccactcag gtcaggacca 1680 gaagtcgctg ttcccttctc agggaataga agattatccc aggtgcctgt gtccaggctg 1740 gtgtctgggt tctgtgctct cttccccatc ccgggtgtcc tgtccattct caagatggcc 1800 acatgcgtgc tggtggagtg tcccatgaca gatgcaaaat gcctgaattt tctgactctt 1860 cccgtcagac ccccccaaga cacatatgac ccaccacccc atctctgacc atgaggccac 1920 cctgaggtgc tgggccctgg gcttctaccc tgcggagatc acactgacct ggcagcggga 1980 tggggaggac cagacccagg acacggagct cgtggagacc aggcctgcag gggatggaac 2040 cttccagaag tgggcggctg tggtggtgcc ttctggagag gagcagagat acacctgcca 2100 tgtgcagcat gagggtctgc ccaagcccct caccctgaga tggggtaagg agggagatgg 2160 gggtgtcatg tctcttaggg aaagcaggag cctctctgga gacctttagc agggtcaggg 2220 cccctcacct tcccctcttt tcccagagct gtcttcccag cccaccatcc ccatcgtggg 2280 catcattgct ggcctggttc tccttggagc tgtgatcact ggagctgtgg tcgctgccgt 2340 gatgtggagg aggaagagct caggtggaga aggggtgaag ggtggggtct gagatttctt 2400 gtctcactga gggttccaag ccccagctag aaatgtgccc tgtctcatta ctgggaagca 2460 ccgtccacaa tcatgggcct acccagtctg ggccctgtgt gccagcactt actcttttgt 2520 aaagcacctg ttaaaatgaa ggacagattt atcaccttga ttacggcggt gatgggacct 2580 gatcccagca gtcacaagtc acaggggaag gtccctgagg acagacctca ggagggctat 2640 tggtccagga cccacacctg ctttcttcat gtttcctgat cccgccctgg gtctgcagtc 2700 acacatttct ggaaacttct ctggggtcca agactaggag gttcctctag gaccttaagg 2760 ccctggctcc tttctggtat ctcacaggac attttcttct cacagataga aaaggaggga 2820 gttacactca ggctgcaagt aagtatgaag gaggctgatg cctgaggtcc ttgggatatt 2880 gtgtttggga gcccatgggg gagcccaccc acctcacaat tcctcctcta gccacatctt 2940 ctgtgggatc tgaccaggtt ctgtttttgt tctaccccag gcagtgacag tgcccagggc 3000 tctgatgtgt ccctcacagc ttgtaaaggt gagagcttgg aggacctaat gtgtgttggg 3060 tgttgggcgg aacagtggac acagctgtgc tatggggttt ctttgcattg gatgtattga 3120 gcatgcgatg ggctgtttaa ggtgtgaccc ctcactgtga tggatatgaa tttgttcatg 3180 aatatttttt tctatagtgt gagacagctg ccttgtgtgg gactgagagg caagagttgt 3240 tcctgccctt ccctttgtga cttgaagaac cctgactttg tttctgcaaa ggcacctgc 3299 // ID LN877297; SV 2; linear; genomic DNA; STD; HUM; 3332 BP. XX AC LN877297; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*55:01:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3332 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; b19860ce7d3e3feec3da15d850ffaf83. DR IMGT/HLA; HLA-B*55:01:01:01; HLA00368. XX FH Key Location/Qualifiers FH FT source 1..3332 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300102" FT /db_xref="taxon:9606" FT CDS join(285..357,486..755,1001..1276,1852..2127,2232..2348, FT 2790..2822,2929..2972) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*55:01:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q3ZV43" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q3ZV43" FT /protein_id="CUA55040.1" FT /translation="MRVTAPRTLLLLLWGALALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRN FT LRGYYNQSEAGSHTWQTMYGCDLGPDGRLLRGHNQLAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAAREAEQLRAYLEGTCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*55:01:01" FT /number=1 FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*55:01:01" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*55:01:01" FT /number=2 FT intron 756..1000 FT /gene="HLA-B" FT /allele="HLA-B*55:01:01" FT /number=2 FT exon 1001..1276 FT /gene="HLA-B" FT /allele="HLA-B*55:01:01" FT /number=3 FT intron 1277..1851 FT /gene="HLA-B" FT /allele="HLA-B*55:01:01" FT /number=3 FT exon 1852..2127 FT /gene="HLA-B" FT /allele="HLA-B*55:01:01" FT /number=4 FT intron 2128..2231 FT /gene="HLA-B" FT /allele="HLA-B*55:01:01" FT /number=4 FT exon 2232..2348 FT /gene="HLA-B" FT /allele="HLA-B*55:01:01" FT /number=5 FT intron 2349..2789 FT /gene="HLA-B" FT /allele="HLA-B*55:01:01" FT /number=5 FT exon 2790..2822 FT /gene="HLA-B" FT /allele="HLA-B*55:01:01" FT /number=6 FT intron 2823..2928 FT /gene="HLA-B" FT /allele="HLA-B*55:01:01" FT /number=6 FT exon 2929..>2972 FT /gene="HLA-B" FT /allele="HLA-B*55:01:01" FT /number=7 XX SQ Sequence 3332 BP; 617 A; 964 C; 1054 G; 697 T; 0 other; gatcaggacg aagtcccatg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagagtct cctcagacac cgagatgcgg gtcacggcac 300 cccgaaccct cctcctgctg ctctgggggg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc gggagggaaa tggcctctgt ggggaggagc gaggggaccg caggcggggg 420 cgcaggaccc ggggagccgc gccgggagga gggtctggcg ggtctcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcta caccgccatg tcccggcccg gccgcgggga 540 gccccgcttc atcgcagtgg gctacgtgga cgacacgcag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggagta 660 ttgggaccgg aacacacaga tctacaaggc ccaggcacag actgaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg ggacggggct gaccgcgggg ccggggccag ggtctcacac ttggcagacg 1020 atgtatggct gcgacctggg gccggacggg cgcctcctcc gcgggcataa ccagttagcc 1080 tacgacggca aggattacat cgccctgaac gaggacctga gctcctggac cgcggcggac 1140 accgcggctc agatcaccca gcgcaagtgg gaggcggccc gtgaggcgga gcagctgaga 1200 gcctacctgg agggcacgtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag 1260 acgctgcagc gcgcgggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc 1320 cggggatggc ctcccacgag aagaggagga aaatgggatc agcgctagaa tgtcgccctc 1380 ccttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc 1440 taggacaatt aagggatgac gtctctgagg aaatggaggg gaagacagtc cctagaatac 1500 tgatcagggg tcctctttga cccctgcagc agccttggga accgtgactt ttcctctcag 1560 gccttgttct ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc 1620 actttacctc cactcagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact 1680 ttccaatgaa taggagatta tcccaggtgc ctgcgtccag gctggtgtct gggttctgtg 1740 ccccttcccc accccaggtg tcctgtccat tctcaggctg gtcacatggg tggtcctagg 1800 gtgtcctatg agagatgcaa agcgcctgaa ttttctgact cttcccatca gaccccccaa 1860 agacacacgt gacccaccac cccatctctg accatgaggc caccctgagg tgctgggccc 1920 tgggcttcta ccctgcggag atcacactga cctggcagcg ggatggcgag gaccaaactc 1980 aggacactga gcttgtggag accagaccag caggagatag aaccttccag aagtgggcag 2040 ctgtggtggt gccttctgga gaagagcaga gatacacatg ccatgtacag catgaggggc 2100 tgccgaagcc cctcaccctg agatggggta aggaggggga tgaggggtca tatctcttct 2160 cagggaaagc aggagccctt ctggagccct tcagcagggt cagggcccct cgtcttcccc 2220 tcctttccca gagccatctt cccagtccac catccccatc gtgggcattg ttgctggcct 2280 ggctgtccta gcagttgtgg tcatcggagc tgtggtcgct actgtgatgt gtaggaggaa 2340 gagctcaggt agggaagggg tgaggggtgg ggtctgggtt ttcttgtccc actgggggtt 2400 tcaagcccca ggtagaagtg ttccctgcct cattactggg aagcagcatc cacacagggg 2460 ctaatgcagc ctgggaccct gtgtgccagc acttactctt ttgtgcagca catgtgacaa 2520 tgaaggacgg atgtatcacc ttgatggttg tggtgttggg gtcctgattt cagcattcat 2580 gagtcagggg aaggtccctg ctaaggacag accttaggag ggcagttggt ccaggaccca 2640 cacttgcttt cctcgtgttt cctgatcctg ccttgggtct gtagtcatac ttctggaaat 2700 tccttttggg tccaagacga ggaggttcct ctaagatctc atggccctgc ttcctcccag 2760 tcccctcaca ggacattttc ttcccacagg tggaaaagga gggagctact ctcaggctgc 2820 gtgtaagtgg tgggggtggg agtgtggagg agctcaccca ccccataatt cctcctgtcc 2880 cacgtctcct gcgggctctg accaggtcct gtttttgttc tactccagcc agcgacagtg 2940 cccagggctc tgatgtgtct ctcacagctt gaaaaggtga gattcttggg gtctagagtg 3000 ggcggggggg ggtggggtgg ggagggggca gaggggaaag gcctgggtaa tggagattct 3060 ttgattggga tgtttcgcgt gtgtggtggg ctgtttagag tgtcatcact taccatgact 3120 aaccagaatt tgttcatgac tgttgttttc tgtagcctga gacagctgtc ttgtgaggga 3180 ctgagatgca ggatttcttc actcctcccc tttgtgactt caagagcctc tggcatctct 3240 ttctgcaaag gcacctgaat gtgtctgcgt ccctgttagc ataatgtgag gaggtggaga 3300 gacagcccac ccccgtgtcc actgtgaccc ct 3332 // ID LN877298; SV 2; linear; genomic DNA; STD; HUM; 3354 BP. XX AC LN877298; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*07:06 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3354 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 3ac9135bdf1975f31d5f501cb5b62c98. DR IMGT/HLA; HLA-C*07:06:01:01; HLA00438. XX FH Key Location/Qualifiers FH FT source 1..3354 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300103" FT /db_xref="taxon:9606" FT CDS join(281..353,484..753,1004..1279,1867..2142,2267..2386, FT 2827..2859,2967..3014,3179..3183) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*07:06" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:C1K0Y0" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:C1K0Y0" FT /protein_id="CUA55041.1" FT /translation="MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQNYKRQAQADRVSLRN FT LRGYYNQSEDGSHTLQRMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA FT AQITQRKLEAARAAEQLRAYLEGTCVEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY FT TCHMQHEGLQEPLTLSWEPSSQPTIPIMGIVAGLAVLVVLAVLGAVVTAKMCRRKSSGG FT KGGSCSQVACSNSAQGSDESLITCKA" FT exon <281..353 FT /gene="HLA-C" FT /allele="HLA-C*07:06" FT /number=1 FT intron 354..483 FT /gene="HLA-C" FT /allele="HLA-C*07:06" FT /number=1 FT exon 484..753 FT /gene="HLA-C" FT /allele="HLA-C*07:06" FT /number=2 FT intron 754..1003 FT /gene="HLA-C" FT /allele="HLA-C*07:06" FT /number=2 FT exon 1004..1279 FT /gene="HLA-C" FT /allele="HLA-C*07:06" FT /number=3 FT intron 1280..1866 FT /gene="HLA-C" FT /allele="HLA-C*07:06" FT /number=3 FT exon 1867..2142 FT /gene="HLA-C" FT /allele="HLA-C*07:06" FT /number=4 FT intron 2143..2266 FT /gene="HLA-C" FT /allele="HLA-C*07:06" FT /number=4 FT exon 2267..2386 FT /gene="HLA-C" FT /allele="HLA-C*07:06" FT /number=5 FT intron 2387..2826 FT /gene="HLA-C" FT /allele="HLA-C*07:06" FT /number=5 FT exon 2827..2859 FT /gene="HLA-C" FT /allele="HLA-C*07:06" FT /number=6 FT intron 2860..2966 FT /gene="HLA-C" FT /allele="HLA-C*07:06" FT /number=6 FT exon 2967..3014 FT /gene="HLA-C" FT /allele="HLA-C*07:06" FT /number=7 FT intron 3015..3178 FT /gene="HLA-C" FT /allele="HLA-C*07:06" FT /number=7 FT exon 3179..>3183 FT /gene="HLA-C" FT /allele="HLA-C*07:06" FT /number=8 XX SQ Sequence 3354 BP; 622 A; 991 C; 1042 G; 699 T; 0 other; gatcaggacg aagtcccagg tcccgggcgg ggctctcagg gtctcaggct ccaagggccg 60 tgtctgcatt ggggaggcgc cgcgttgggg attctccact cccctgagtt tcacttctcc 120 caacctgcgt cgggtccttc ttcctgaata ctcatgacgc gtccccaatt cccactccca 180 ttgggtgtcg ggttctagag aagccaatca gcgtctccgc agtcccggtt ctaaagtccc 240 cagtcaccca cccggactca cattctcccc agaggccgag atgcgggtca tggcgccccg 300 agccctcctc ctgctgctct cgggaggcct ggccctgacc gagacctggg cctgtgagtg 360 cggggttggg agggaagcgg cctctgcgga gaggagcgag gggcccgccc ggcgagggcg 420 caggacccgg ggagccgcgc agggaggtgg gtcgggcggg tctcagcccc tcctcgcccc 480 caggctccca ctccatgagg tatttcgaca ccgccgtgtc ccggcccggc cgcggagagc 540 cccgcttcat ctcagtgggc tacgtggacg acacgcagtt cgtgcggttc gacagcgacg 600 ccgcgagtcc gagaggggag ccgcgggcgc cgtgggtgga gcaggagggg ccggagtatt 660 gggaccggga gacacagaac tacaagcgcc aggcacaggc tgaccgagtg agcctgcgga 720 acctgcgcgg ctactacaac cagagcgagg acggtgagtg accccggccc ggggcgcagg 780 tcacgacccc tccccatccc ccacggacgg cccgggtcgc cccgagtctc cccgtctgag 840 atccacccca aggtggatct gcggaacccg cccagaccct cgaccggaga gagccccagt 900 cgcctttacc cggtttcatt ttcggtttag gccaaaatcc ccgcgggttg gtcggggcgg 960 ggcggggctc gggggactgg gctgaccgcg ggggcggggc cagggtctca caccctccag 1020 aggatgtatg gctgcgacct ggggcccgac gggcgcctcc tccgcgggta tgaccagtcc 1080 gcctacgacg gcaaggatta catcgccctg aacgaggacc tgcgctcctg gaccgccgcg 1140 gacaccgcgg ctcagatcac ccagcgcaag ttggaggcgg cccgtgcggc ggagcagctg 1200 agagcctacc tggagggcac gtgcgtggag tggctccgca gatacctgga gaacgggaag 1260 gagacgctgc agcgcgcagg taccaggggc agtggggagc cttccccatc tcctatagat 1320 ctcccgggat ggcctcccac gaggagggga ggaaaatggg atcagcactg gaatatcgcc 1380 ctcccttgaa tggagaatgg catgagtttt cctgagtttc ctctgagggc cccctctgct 1440 ctctaggaca attaagggat gaagtctctg aggaaatgga ggggaagaca gtccctggaa 1500 tactgatcag gggtctcctt tgaccacttt gaccactgca gcagctgtgg tcaggctgct 1560 gacttttctc tcaggccttg ttctctgcct cacactcaat gtgtctgaag gtttgattcc 1620 agcttttctg agtcctgcag cctccactca ggtcaggacc agaagtcgct gttcctccct 1680 cagagactag aactttccaa tgaataggag attatcccag gtgcctgtgt ccaggctggc 1740 gtctgggttc tgtgccgcct tccccacccc aggtgtcctg tccattctca ggatggtcac 1800 atgggcgctg ctggagtgtc ccaagagaga tgcaaagtgt ctgaattttc tgactcttcc 1860 cgtcagaacc cccaaagaca cacgtgaccc accaccccct ctctgaccat gaggccaccc 1920 tgaggtgctg ggccctgggc ttctaccctg cggagatcac actgacctgg cagcgggatg 1980 gggaggacca gacccaggac accgagcttg tggagaccag gccagcagga gatggaacct 2040 tccagaagtg ggcagctgtg gtggtgcctt ctggacaaga gcagagatac acgtgccata 2100 tgcagcacga ggggctgcaa gagcccctca ccctgagctg gggtaaggag gggaatgggg 2160 ggtcacatct cttatcagag aaagcagaag tccttctgga gcccttcagc cgggtcaggg 2220 ctgaggcttg ggggtcaggg cccctcacct tctcctcttt tcccagagcc atcttcccag 2280 cccaccatcc ccatcatggg catcgttgct ggcctggctg tcctggttgt cctagctgtc 2340 cttggagctg tggtcaccgc taagatgtgt aggaggaaga gctcaggtag ggaaggggtg 2400 aagagcgggg tctgggtttt cttgtcccac tgggagtttc aagccccagg tagaagtgtg 2460 ccccgccttg ttactggaag caccatccac acatgggcca tcccagcctg ggaccctgtg 2520 tgccagcact tactcttttg tgaagcacat gtgacaatga aggacggatg tatcaccttg 2580 atgattatgg tgttggggtc ctgattccag cattcatgag tcaggggaag gtccctgcta 2640 aggacagacc ttaggagggc agttggtcca gaacccacaa ctgctttccc catgtttcct 2700 gatcctgccc tgggtctgca gtcgtagttc tggaaacttc tcttgggtcc aagactagga 2760 ggttccccta agatcacatg gccctgcctc ctcccagtcc cctcataggg cattttcttc 2820 ccacaggtgg aaaaggaggg agctgctctc aggttgcgtg taagtgatgg cggcgggcgt 2880 gtggaggagc tcacctactc cataattcct cttgtcccac atctcctgcg ggctctgacc 2940 aggtcttttt ttttgttcta ccccaggcag caacagtgcc cagggctctg atgagtctct 3000 catcacttgt aaaggtgaga ttctggggag ctgaagtggt cgggggtggg gcagagggaa 3060 aaggcctggg taatggggat tctttgattg ggacgtttcg agtgtgtggt gggccgttca 3120 gagtgtcatc acttaccatg actgacctga atttgttcat gactattgtg ttctgtagcc 3180 tgagacagct gcctgtgtgg gactgagatg caggatttct tcacacctct cctttgtgac 3240 ttcaagagcc tctggcatct ctttctgcaa aggcatctga atgtgtctgc gtccctgtta 3300 gcataatgtg aggaggtgga gagacagccc acccccgtgt ccaccgtgac ccct 3354 // ID LN877299; SV 2; linear; genomic DNA; STD; HUM; 3323 BP. XX AC LN877299; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*44:03:02 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3323 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; e3aa5c321aa34c497ab2836b7d4175be. DR Ensembl-Gn; ENSG00000224608; homo_sapiens. DR Ensembl-Tr; ENST00000435618; homo_sapiens. DR IMGT/HLA; HLA-B*44:03:02; HLA00320. XX FH Key Location/Qualifiers FH FT source 1..3323 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300103" FT /db_xref="taxon:9606" FT CDS join(285..357,487..756,1000..1275,1851..2126,2220..2336, FT 2778..2810,2917..2960) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*44:03:02" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q2L6G2" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q2L6G2" FT /protein_id="CUA55042.1" FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRT FT ALRYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQDAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGLCVESLRRYLENGKETLQRADPPKTHVTHHPISDHE FT VTLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*44:03:02" FT /number=1 FT intron 358..486 FT /gene="HLA-B" FT /allele="HLA-B*44:03:02" FT /number=1 FT exon 487..756 FT /gene="HLA-B" FT /allele="HLA-B*44:03:02" FT /number=2 FT intron 757..999 FT /gene="HLA-B" FT /allele="HLA-B*44:03:02" FT /number=2 FT exon 1000..1275 FT /gene="HLA-B" FT /allele="HLA-B*44:03:02" FT /number=3 FT intron 1276..1850 FT /gene="HLA-B" FT /allele="HLA-B*44:03:02" FT /number=3 FT exon 1851..2126 FT /gene="HLA-B" FT /allele="HLA-B*44:03:02" FT /number=4 FT intron 2127..2219 FT /gene="HLA-B" FT /allele="HLA-B*44:03:02" FT /number=4 FT exon 2220..2336 FT /gene="HLA-B" FT /allele="HLA-B*44:03:02" FT /number=5 FT intron 2337..2777 FT /gene="HLA-B" FT /allele="HLA-B*44:03:02" FT /number=5 FT exon 2778..2810 FT /gene="HLA-B" FT /allele="HLA-B*44:03:02" FT /number=6 FT intron 2811..2916 FT /gene="HLA-B" FT /allele="HLA-B*44:03:02" FT /number=6 FT exon 2917..>2960 FT /gene="HLA-B" FT /allele="HLA-B*44:03:02" FT /number=7 XX SQ Sequence 3323 BP; 614 A; 965 C; 1052 G; 692 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccct cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggccggtg 360 agtgcggggt cgggagggaa atggcctctg tggggaggag agaggggacc gcaggcgggg 420 gcgcaggacc cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg 540 agccccgctt catcaccgtg ggctacgtgg acgacacgct gttcgtgagg ttcgacagcg 600 acgccacgag tccgaggaag gagccgcggg cgccatggat agagcaggag gggccggagt 660 attgggaccg ggagacacag atctccaaga ccaacacaca gacttaccga gagaacctgc 720 gcaccgcgct ccgctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgccccc gaggccgcgg gacccgccca gaccctcgac cggcgagagc cccaggcgcg 900 tttacccggt ttcattttca gttgaggcca aaatccccgc gggttggtcg gggcggggcg 960 gggctcgggg gacggggctg accgcggggc cggggccagg gtctcacatc atccagagga 1020 tgtatggctg cgacgtgggg ccggacgggc gcctcctccg cgggtatgac caggacgcct 1080 acgacggcaa ggattacatc gccctgaacg aggacctgag ctcctggacc gcggcggaca 1140 ccgcggctca gatcacccag cgcaagtggg aggcggcccg tgtggcggag cagctgagag 1200 cctacctgga gggcctgtgc gtggagtcgc tccgcagata cctggagaac gggaaggaga 1260 cgctgcagcg cgcgggtacc aggggcagtg gggagccttc cccatctcct ataggtcgcc 1320 ggggatggcc tcccacgaga agaggaggaa aatgggatca gcgctagaat gtcgccctcc 1380 cttgaatgga gaatggcatg agttttcctg agtttcctct gagggccccc tcttctctct 1440 aggacaatta agggatgacg tctctgagga aatggagggg aagacagtcc ctagaatact 1500 gatcaggggt cccctttgac ccctgcagca gccttgggaa ccgtgacttt tcctctcagg 1560 ccttgttctc tgcctcacac tcagtgtgtt tggggctctg attccagcac ttctgagtca 1620 ctttacctcc actcagatca ggagcagaag tccctgttcc ccgctcagag actcgaactt 1680 tccaatgaat aggagattat cccaggtgcc tgcgtccagg ctggtgtctg ggttctgtgc 1740 cccttcccca ccccaggtgt cctgtccatt ctcaggctgg tcacatgggt ggtcctaggg 1800 tgtcccatga gagatgcaaa gcgcctgaat tttctgactc ttcccatcag accccccaaa 1860 gacacatgtg acccaccacc ccatctctga ccatgaggtc accctgaggt gctgggccct 1920 gggcttctac cctgcggaga tcacactgac ctggcagcgg gatggcgagg accaaactca 1980 ggacaccgag cttgtggaga ccagaccagc aggagataga accttccaga agtgggcagc 2040 tgtggtggtg ccttctggag aagagcagag atacacatgc catgtacagc atgaggggct 2100 gccgaagccc ctcaccctga gatggggtaa ggagggggat gaggggtcat atctcttctc 2160 agggaaagca ggagcccttc agcagggtca gggcccctca tcttcccttc ctttcccaga 2220 gccgtcttcc cagtccaccg tccccatcgt gggcattgtt gctggcctgg ctgtcctagc 2280 agttgtggtc atcggagctg tggtcgctgc tgtgatgtgt aggaggaaga gctcaggtag 2340 ggaaggggtg aggggtgggg tctgggtttt cttgtcccac tgggggtttc aagccccagg 2400 tagaagtgtt ccctgcctca ttactgggaa gcagcatcca cacaggggct aacgcagcct 2460 gggaccctgt gtgccagcac ttactctttt gtgcagcaca tgtgacaatg aaggacggat 2520 gtatcacctt ggtggttgtg gtgttggggt cctgattcca gcattcatga gtcaggggaa 2580 ggtccctgct aaggacagac cttaggaggg cagttggtcc aggacccaca cttgctttcc 2640 tcgtgtttcc tgatcctgcc ttgggtctgt agtcatactt ctggaaattc cttttgggtc 2700 caagacgagg aggttcctct aagatctcat ggccctgctt cctcccagtc ccctcacagg 2760 gcattttctt cccacaggtg gaaaaggagg gagctactct caggctgcgt gtaagtgatg 2820 ggggcgggag tgtggaggag ctcacccacc ccataattcc tcctgtccca cgtctcctgc 2880 gggctctgac caggtcctgt ttttgttcta ctccaggcag cgacagtgcc cagggctctg 2940 atgtgtctct cacagcttga aaaggtgaga ttcttggggt ctagagtggg tggggtggca 3000 ggtctggggg tgggtggggc agtggggaaa ggcctgggta atggagattc tttgattggg 3060 atgtttcgcg tgtgtggtgg gctgtttaga gtgtcatcac ttaccatgac taaccagaat 3120 ttgttcatga ctgttgtttt ctgtagcctg agacagctgt cttgtgaggg actgagatgc 3180 aggatttctt cacgcctccc ctttgtgact tcaagagcct ctggcatctc tttctgcaaa 3240 ggcacctgaa tgtgtctgcg tccctgttag cataatgtga ggaggtggag agacagccca 3300 cccccgtgtc caccgtgacc cct 3323 // ID LN877300; SV 2; linear; genomic DNA; STD; HUM; 3300 BP. XX AC LN877300; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-A gene for MHC class I antigen, allele HLA-A*11:183 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3300 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 59c9f65597cf57485cfeb2afc6ccdf2c. DR IMGT/HLA; HLA-A*11:183; HLA10955. XX FH Key Location/Qualifiers FH FT source 1..3300 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300103" FT /db_xref="taxon:9606" FT CDS join(301..373,504..773,1015..1290,1870..2145,2248..2364, FT 2807..2839,2982..3029,3199..3203) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-A" FT /allele="HLA-A*11:183" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A1D0BSQ3" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A1D0BSQ3" FT /protein_id="CUA55043.1" FT /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGT FT LRGYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMA FT AQITKRKWEAAHVAEQWRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRK FT GGSYTQAASSDSAQGSDVSLTACKV" FT exon <301..373 FT /gene="HLA-A" FT /allele="HLA-A*11:183" FT /number=1 FT intron 374..503 FT /gene="HLA-A" FT /allele="HLA-A*11:183" FT /number=1 FT exon 504..773 FT /gene="HLA-A" FT /allele="HLA-A*11:183" FT /number=2 FT intron 774..1014 FT /gene="HLA-A" FT /allele="HLA-A*11:183" FT /number=2 FT exon 1015..1290 FT /gene="HLA-A" FT /allele="HLA-A*11:183" FT /number=3 FT intron 1291..1869 FT /gene="HLA-A" FT /allele="HLA-A*11:183" FT /number=3 FT exon 1870..2145 FT /gene="HLA-A" FT /allele="HLA-A*11:183" FT /number=4 FT intron 2146..2247 FT /gene="HLA-A" FT /allele="HLA-A*11:183" FT /number=4 FT exon 2248..2364 FT /gene="HLA-A" FT /allele="HLA-A*11:183" FT /number=5 FT intron 2365..2806 FT /gene="HLA-A" FT /allele="HLA-A*11:183" FT /number=5 FT exon 2807..2839 FT /gene="HLA-A" FT /allele="HLA-A*11:183" FT /number=6 FT intron 2840..2981 FT /gene="HLA-A" FT /allele="HLA-A*11:183" FT /number=6 FT exon 2982..3029 FT /gene="HLA-A" FT /allele="HLA-A*11:183" FT /number=7 FT intron 3030..3198 FT /gene="HLA-A" FT /allele="HLA-A*11:183" FT /number=7 FT exon 3199..>3203 FT /gene="HLA-A" FT /allele="HLA-A*11:183" FT /number=8 XX SQ Sequence 3300 BP; 631 A; 952 C; 1021 G; 696 T; 0 other; caagagcaga ggggtcaggg cgaagtccca gggccccagg cgtggctctc agggtctcag 60 gccccgaagg cggtgtatgg attggggagt cccagccttg gggattcccc aactccgcag 120 tttcttttct ccctctccca acctacgtag ggtccttcat cctggatact cacgacgcgg 180 acccagttct cactcccatt gggtgtcggg tttccagaga agccaatcag tgtcttcgcg 240 gtcgctcttc taaagtccgc acgcacccac cgggactcag attctcccca gaccccgagg 300 atggccgtca tggcgccccg aaccctcctc ctgctactct cgggggccct ggccctgacc 360 cagacctggg cgggtgagtg cggggtcggg agggaaaccg cctctgcggg gagaagcaag 420 gggccctcct ggcgggggcg caggaccggg ggagccgcgc cgggaggagg gtcgggcagg 480 tctcagccac tgctcgcccc caggctccca ctccatgagg tatttctaca cctccgtgtc 540 ccggcccggc cgcggggagc cccgcttcat cgccgtgggc tacgtggacg acacgcagtt 600 cgtgcggttc gacagcgacg ccgcgagcca gaggatggag ccgcgggcgc cgtggataga 660 gcaggagggg ccggagtatt gggaccagga gacacggaat gtgaaggccc agtcacagac 720 tgaccgagtg gacctgggga ccctgcgcgg ctactacaac cagagcgagg acggtgagtg 780 accccggccc ggggcgcagg tcacgacccc tcatccccca cggacgggcc aggtggccca 840 cagtctccgg gtccgagatc caccccgaag ccgcgggacc ccgagaccct tgccccggga 900 gaggcccagg cgcctttacc cggtttcatt ttcagtttag gccaaaaatc cccccgggtt 960 ggtcggggcc gggcagggct tgggggactg ggctgaccgc ggggtcgggg ccaggttctc 1020 acaccatcca gataatgtat ggctgcgacg tggggccgga cgggcgcttc ctccgcgggt 1080 accggcagga cgcctacgac ggcaaggatt acatcgccct gaacgaggac ctgcgctctt 1140 ggaccgcggc ggacatggca gctcagatca ccaagcgcaa gtgggaggcg gcccatgtgg 1200 cggagcagtg gagagcctac ctggagggcc ggtgcgtgga gtggctccgc agatacctgg 1260 agaacgggaa ggagacgctg cagcgcacgg gtaccagggg ccacggggcg cctccctgat 1320 cgcctataga tctcccgggc tggcctccca caaggagggg agacaattgg gaccaacact 1380 agaatatcac cctccctctg gtcctgaggg agaggaatcc tcctgggttt ccagatcctg 1440 taccagagag tgactctgag gttccgccct gctctctgac acaattaagg gataaaatct 1500 ctgaaggagt gacgggaaga cgatccctcg aatactgatg agtggttccc tttgacaccg 1560 gcagcagcct tgggcccgtg acttttcctc tcaggccttg ttctctgctt cacactcaat 1620 gtgtgtgggg gtctgagtcc agcacttctg agtctctcag cctccactca ggtcaggacc 1680 agaagtcgct gttcccttct cagggaatag aagattatcc caggtgcctg tgtccaggct 1740 ggtgtctggg ttctgtgctc tcttccccat cccgggtgtc ctgtccattc tcaagatggc 1800 cacatgcgtg ctggtggagt gtcccatgac agatgcaaaa tgcctgaatt ttctgactct 1860 tcccgtcaga cccccccaag acacatatga cccaccaccc catctctgac catgaggcca 1920 ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc tggcagcggg 1980 atggggagga ccagacccag gacacggagc tcgtggagac caggcctgca ggggatggaa 2040 ccttccagaa gtgggcggct gtggtggtgc cttctggaga ggagcagaga tacacctgcc 2100 atgtgcagca tgagggtctg cccaagcccc tcaccctgag atggggtaag gagggagatg 2160 ggggtgtcat gtctcttagg gaaagcagga gcctctctgg agacctttag cagggtcagg 2220 gcccctcacc ttcccctctt ttcccagagc tgtcttccca gcccaccatc cccatcgtgg 2280 gcatcattgc tggcctggtt ctccttggag ctgtgatcac tggagctgtg gtcgctgccg 2340 tgatgtggag gaggaagagc tcaggtggag aaggggtgaa aggtggggtc tgagatttct 2400 tgtctcactg agggttccaa gccccagcta gaaatgtgcc ctgtctcatt actgggaagc 2460 accttccaca atcatgggcc gacccagcct gggccctgtg tgccagcact tactcttttg 2520 taaagcacct gttaaaatga aggacagatt tatcaccttg attacggcgg tgatgggacc 2580 tgataccagc agtcacaagt cacaggggaa ggtccctgag gacagacctc aggagggcta 2640 ttggtccagg acccacacct gctttcttca tgtttcctga tcccgccctg ggtctgcagt 2700 cacacatttc tggaaacttc tctggggtcc aagactagga ggttcctcta ggaccttaag 2760 gccctggctc ctttctggta tctcacagga cattttcttc ccacagatag aaaaggaggg 2820 agttacactc aggctgcaag taagtatgaa ggaggctgat gcctgaggtc cttgggatat 2880 tgtgtttggg agcccatggg ggagctcacc caccccacaa ttcctcctct agccacatct 2940 tctgtgggat ctgaccaggt tctgtttttg ttctacccca ggcagtgaca gtgcccaggg 3000 ctctgatgtg tctctcacag cttgtaaagg tgagagcttg gagggcctga tgtgtgttgg 3060 gtgttgggcg gaacagtgga cacagctgtg ctatggggtt tctttgcatt ggatgtattg 3120 agcatgcgat gggctgttta aggtgtgacc cctcactgtg atggatatga atttgttcat 3180 gaatattttt ttctatagtg tgagacagct gccttgtgtg ggactgagag gcaagagttg 3240 ttcctgccct tccctttgtg acttgaagaa ccctgacttt gtttctgcaa aggcacctgc 3300 // ID LN877301; SV 2; linear; genomic DNA; STD; HUM; 3314 BP. XX AC LN877301; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-A gene for MHC class I antigen, allele HLA-A*26new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3314 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 959aea811881d072aa315497639bdb62. DR Ensembl-Gn; ENSG00000206505; homo_sapiens. DR Ensembl-Tr; ENST00000383605; homo_sapiens. DR Ensembl-Tr; ENST00000549224; homo_sapiens. DR IMGT/HLA; HLA-A*26:01:39; HLA14078. XX FH Key Location/Qualifiers FH FT source 1..3314 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300104" FT /db_xref="taxon:9606" FT CDS join(301..373,504..773,1015..1290,1891..2166,2266..2382, FT 2821..2853,2996..3043,3213..3217) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-A" FT /allele="HLA-A*26new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q5SPM2" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q5SPM2" FT /protein_id="CUA55044.1" FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAHSQTDRANLGT FT LRGYYNQSEDGSHTIQRMYGCDVGPDGRFLRGYQQDAYDGKDYIALNEDLRSWTAADMA FT AQITQRKWETAHEAEQWRAYLEGRCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWASVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVIAGAVVAAVMWRRKSSDRK FT GGSYSQAASSDSAQGSDMSLTACKV" FT exon <301..373 FT /gene="HLA-A" FT /allele="HLA-A*26:01:39" FT /number=1 FT intron 374..503 FT /gene="HLA-A" FT /allele="HLA-A*26:01:39" FT /number=1 FT exon 504..773 FT /gene="HLA-A" FT /allele="HLA-A*26:01:39" FT /number=2 FT intron 774..1014 FT /gene="HLA-A" FT /allele="HLA-A*26:01:39" FT /number=2 FT exon 1015..1290 FT /gene="HLA-A" FT /allele="HLA-A*26:01:39" FT /number=3 FT intron 1291..1890 FT /gene="HLA-A" FT /allele="HLA-A*26:01:39" FT /number=3 FT exon 1891..2166 FT /gene="HLA-A" FT /allele="HLA-A*26:01:39" FT /number=4 FT intron 2167..2265 FT /gene="HLA-A" FT /allele="HLA-A*26:01:39" FT /number=4 FT exon 2266..2382 FT /gene="HLA-A" FT /allele="HLA-A*26:01:39" FT /number=5 FT intron 2383..2820 FT /gene="HLA-A" FT /allele="HLA-A*26:01:39" FT /number=5 FT exon 2821..2853 FT /gene="HLA-A" FT /allele="HLA-A*26:01:39" FT /number=6 FT intron 2854..2995 FT /gene="HLA-A" FT /allele="HLA-A*26:01:39" FT /number=6 FT exon 2996..3043 FT /gene="HLA-A" FT /allele="HLA-A*26:01:39" FT /number=7 FT intron 3044..3212 FT /gene="HLA-A" FT /allele="HLA-A*26:01:39" FT /number=7 FT exon 3213..>3217 FT /gene="HLA-A" FT /allele="HLA-A*26:01:39" FT /number=8 XX SQ Sequence 3314 BP; 630 A; 957 C; 1028 G; 699 T; 0 other; caggagcaga ggggtcaggg cgaagtccca gggccccagg cgtggctctc agggtctcag 60 gccccgaagg cggtatatgg attggggagt cccagccttg gggattcccc aactccgcag 120 tttcttttct ccctctccca acctatgtag ggtccttctt cctggatact cacgacgcgg 180 acccagttct cactcccatt gggtgtcggg tttccagaga agccaatcag tgtcgtcgcg 240 gtcgcggttc taaagtccgc acgcacccac cgggactcag attctcccca gacgccgagg 300 atggccgtca tggcgccccg aaccctcgtc ctgctactct cgggggccct ggccctgacc 360 cagacctggg cgggtgagtg cggggtcggg agggaaacgg cctctgtggg gagaagcaag 420 gggcccgccc ggcgggggcg caggacccgg gaagccgcgc ctggaggagg gtcgggcggg 480 tctcagccac tcctcgcccc caggctccca ctccatgagg tatttctaca cctccgtgtc 540 ccggcccggc cgcggggagc cccgcttcat cgccgtgggc tacgtggacg acacgcagtt 600 cgtgcggttc gacagcgacg ccgcgagcca gaggatggag ccgcgggcgc cgtggataga 660 gcaggagggg ccggagtatt gggaccggaa cacacggaat gtgaaggccc actcacagac 720 tgaccgagcg aacctgggga ccctgcgcgg ctactacaac cagagcgagg acggtgagtg 780 accccggccc ggggcgcagg tcacgacccc tcatccccca cggacgggcc aggtcgccca 840 cagtctccgg gtccgagatc cgccccgaag ccgcgggacc ccgagaccct tgccccggga 900 gaggcccagg cgcctttacc cggtttcatt ttcagtttag gccaaaaatc cccccgggtt 960 ggtcggggcg gggcggggct cgggggaccg ggctgacctc ggggtccggg ccaggttctc 1020 acaccatcca gaggatgtat ggttgcgacg tggggccgga cgggcgcttc ctccgcgggt 1080 accagcagga cgcttacgac ggcaaggatt acatcgccct gaacgaggac ctgcgctctt 1140 ggaccgcggc ggacatggcg gctcagatca cccagcgcaa gtgggagacg gcccatgagg 1200 cggagcagtg gagagcctac ctggagggcc ggtgcgtgga gtggctccgc agatacctgg 1260 agaacgggaa ggagacgctg cagcgcacgg gtaccagggg ccacggggcg cctccctgat 1320 cgcctgtaga tctcccgggc tggcctccca caaggagggg agacaattgg gaccaacact 1380 agaatatcgc cctccctctg gtcctgaggg agaggaatcc tcctgggttt ccagatcctg 1440 taccagagag tgactctgag gttccgccct gctctctgac acaattaagg gataaaatct 1500 ctgaaggaat gacgggaaga cgatccctcg aatactgatg agtggttccc tttgacacac 1560 accggcagca gccttgggcc cgtgactttt cctctcaggc cttgttctct gcttcacact 1620 caatgtgtgt gggggtctga gtccagcact tctgagtccc tcagcctcca ctcaggtcag 1680 gaccagaagt cgctgttccc tcttcaggga ctagaatttt ccacggaata ggagattatc 1740 ccaggtgcct gtgtccaggc tggtgtctgg gttctgtgct cccttcccca tcccaggtgt 1800 cctgtccatt ctcaagatag ccacatgtgt gctggaggag tgtcccatga cagatgcaaa 1860 atgcctgaat gttctgactc ttcctgacag acgcccccaa gacgcatatg actcaccacg 1920 ctgtctctga ccatgaggcc accctgaggt gctgggccct gagcttctac cctgcggaga 1980 tcacactgac ctggcagcgg gatggggagg accagaccca ggacacggag ctcgtggaga 2040 ccaggcctgc aggggatggg accttccaga agtgggcgtc tgtggtggtg ccttctggac 2100 aggagcagag atacacctgc catgtgcagc atgagggtct gcccaagccc ctcaccctga 2160 gatggggtaa ggagggagac gggggtgtca tgtcttttag ggaaagcagg agcctctctg 2220 acctttagca gggtcagggc ccctcacctt cccctctttt cccagagccg tcttcccagc 2280 ccaccatccc catcgtgggc atcattgctg gcctggttct ctttggagct gtgatcgctg 2340 gagctgtggt cgctgctgtg atgtggagga ggaagagctc aggtggggaa gggatgaagg 2400 gtgggtctga gatttcttgt ctcactgagg gttccaagac ccaggtagaa gtgtgccctg 2460 cctcgttact gggaagcacc atccacaatt atgagcctac ccagcctggg ccctgtgtgc 2520 cagcacttac tcttttgtaa agcacctgtt aaaatgaagg acagatttat caccttgatt 2580 acggcggtga tgggacctga tcccagcagt cacaagtcac aggggaaggt ccctgaggac 2640 cttcaggagg gcggttggtc caggacccac acctgctttc ttcatgtttc ctgatcccgc 2700 cctgggtctg cagtcacaca tttctggaaa cttctctgag gtccaagact tggaggttcc 2760 tctaggacct taaggccctg gctcctttct ggtatctcac aggacatttt cttcccacag 2820 atagaaaagg agggagctac tctcaggctg caagtaagta tgaaggaggc tgatgcctga 2880 ggtccttggg atattgtgtt tgggagcccg tgggggagct cacccacccc acaattcctc 2940 ctctagccac atgttctgtg ggatctgacc aggttctgtt tttgtcctac cccaggcagt 3000 gacagtgccc agggctctga tatgtctctc acagcttgta aaggtgagag cctggagggc 3060 ctgatgtgtg ttgggtgttg ggcggaacag tggacgcagc tgtgctatgg ggtttctttg 3120 cattggatgt attgagcatg cgatgggctg tttaaagtgt gactcctcac tgtgacagat 3180 acgaatttgt tcatgaatat ttttttctat agtgtgagac agctgccttg tgtgggactg 3240 agaggcaaga tttgttcctg cccttccctt tgtgacttga agaaccctga ctttgtttct 3300 gcaaaggcac ctgc 3314 // ID LN877302; SV 2; linear; genomic DNA; STD; HUM; 3312 BP. XX AC LN877302; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*14:33 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3312 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 3ddee89748d45fb61894cb9fc3b275e7. DR IMGT/HLA; HLA-B*14:33; HLA08376. XX FH Key Location/Qualifiers FH FT source 1..3312 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300105" FT /db_xref="taxon:9606" FT CDS join(285..357,486..755,1002..1277,1850..2125,2219..2335, FT 2777..2809,2916..2959) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*14:33" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A1D0BQW3" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A1D0BQW3" FT /protein_id="CUA55045.1" FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTAVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQICKTNTQTDRESLRN FT LRGYYNQSEAGSHTLQWMYGCDVGPDGRLLRGYDQYAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAAREAEQLRAYLEGTCVEWLRRHLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*14:33" FT /number=1 FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*14:33" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*14:33" FT /number=2 FT intron 756..1001 FT /gene="HLA-B" FT /allele="HLA-B*14:33" FT /number=2 FT exon 1002..1277 FT /gene="HLA-B" FT /allele="HLA-B*14:33" FT /number=3 FT intron 1278..1849 FT /gene="HLA-B" FT /allele="HLA-B*14:33" FT /number=3 FT exon 1850..2125 FT /gene="HLA-B" FT /allele="HLA-B*14:33" FT /number=4 FT intron 2126..2218 FT /gene="HLA-B" FT /allele="HLA-B*14:33" FT /number=4 FT exon 2219..2335 FT /gene="HLA-B" FT /allele="HLA-B*14:33" FT /number=5 FT intron 2336..2776 FT /gene="HLA-B" FT /allele="HLA-B*14:33" FT /number=5 FT exon 2777..2809 FT /gene="HLA-B" FT /allele="HLA-B*14:33" FT /number=6 FT intron 2810..2915 FT /gene="HLA-B" FT /allele="HLA-B*14:33" FT /number=6 FT exon 2916..>2959 FT /gene="HLA-B" FT /allele="HLA-B*14:33" FT /number=7 XX SQ Sequence 3312 BP; 620 A; 962 C; 1039 G; 691 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccctgagtt tcacttcttc 120 tcccaacttg tgtcgggtcc ttcttccagg atactcgtga cgcatcccca cttcccactc 180 ccattgggtg tcggatatct agagaagcca atcagcgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagagtct cctcagacgc caagatgctg gtcatggcgc 300 cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc gggagggaaa tggcctctgc cgggaggagc gaggggaccg caggcggggg 420 cgcaggacct gaggagccgc gccgggagga gggtcgggcg ggtttcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcta caccgccgtg tcccggcccg gccgcgggga 540 gccccgcttc atctcagtgg gctacgtgga cgacacgcag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggaata 660 ttgggaccgg aacacacaga tctgcaagac caacacacag actgaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacggacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttgggc ggggcggggc 960 ggggctcggg gggactgggc tgaccgcggg ggcggggcca gggtctcaca ccctccagtg 1020 gatgtatggc tgcgacgtgg ggcccgacgg gcgcctcctc cgcgggtatg accagtacgc 1080 ctacgacggc aaggattaca tcgccctgaa cgaggacctg agctcctgga ccgcggcgga 1140 caccgcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgaggcgg agcagctgag 1200 agcctacctg gagggcacgt gcgtggagtg gctccgcaga cacctggaga acgggaagga 1260 gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320 ccggggatgg cctcccacga gaagaagagg aaaatgggat cagcgctaga atgtcgccct 1380 cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440 ctaggacaat taagggatga cgtctctgag gaaatggagg ggaagacagt ccctagaata 1500 ctgatcaggg gtcccctttg acccctgcag cagccttggg aaccatgact tttcttctca 1560 ggccttgttc tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt 1620 cactttacct ccactcagat caggagcaga agtctctgtt ccccgctcag agactcgaac 1680 tttccaatga atagattatc ccaggtgcct gcgtccaggc tggtgtctgg gttctgtgtc 1740 ccttccccac cccaggtgtc ctgtccattc tcaggctggt cacatgggtg gtcctagggt 1800 gtcccatgag agatgcaaag cgcctgaatt ttctgactct tcccatcaga ccccccaaag 1860 acacatgtga cccaccaccc catctctgac catgaggcca ccctgaggtg ctgggccctg 1920 ggcttctacc ctgcggagat cacactgacc tggcagcggg atggcgagga ccaaactcag 1980 gacaccgagc ttgtggagac cagaccagca ggagacagaa ccttccagaa gtgggcagct 2040 gtggtggtgc cttctggaga agagcagaga tacacatgcc atgtacagca tgaggggctg 2100 ccgaagcccc tcaccctgag atggggtaag gagggggatg aggggtcata tctcttctca 2160 gggaaagcag gagcccttca gcagggtcag ggcccctcat cttcccctcc tttcccagag 2220 ccatcttccc agtccaccgt ccccatcgtg ggcattgttg ctggcctggc tgtcctagca 2280 gttgtggtca tcggagctgt ggtcgctgct gtgatgtgta ggaggaagag ttcaggtagg 2340 gaaggggtga ggggtggggt ctgggttttc ttgtcccact gggggtttca agccccaggt 2400 agaagtgttc cctgcatcat tactgggaag cagcatgcac acaggggcta acgcagcctg 2460 ggaccctgtg tgccagcact tactcttttg tgcagcacat gtgacaatga aggacggatg 2520 tatcaccttg atggttgtgg tgttggggtc ctgattccag cattcatgag tcaggggaag 2580 gtccctgcta aggacagacc ttaggagggc agttggtcca ggacccacac ttgctttcct 2640 cgtgtttcct gatcctgccc tgggtctgta gtcatacttc tggaaattcc ttttgggtcc 2700 aagactagga ggttcctcta agatctcatg gccctgcttc ctcccagtcc cctcacagga 2760 cattttcttc ccacaggtgg aaaaggaggg agctactctc aggctgcgtg taagtggtgg 2820 gggtgggagt gtggaggagc tcacccaccc cataattcct cctgtcccac gtctcctgtg 2880 ggctctgacc aggtcctgtt tttgttctac tccagccagc gacagtgccc agggctctga 2940 tgtgtctctc acagcttgaa aaggtgagat tcttggggtc tagagtgggc gggggggcgg 3000 ggagggggca gaggggaaag gcctgggtaa tggagattct ttgattggga tgtttcgcgt 3060 gtgtgatggg ctgttcagag tgtcatcact taccatgact aaccagaatt tgttcatgac 3120 tgttgttttc tgtagcctga gacagctgtc ttgtgaggga ctgagatgca ggatttcttc 3180 acgcctcccc tttgtgactt caagagcctc tggcatctct ttctgcaaag gcacctgaat 3240 gtgtctgcgt ccctgttagc ataatgtgag gaggtggaga gacagcccac ccttgtgtcc 3300 actgtgaccc ct 3312 // ID LN877303; SV 2; linear; genomic DNA; STD; HUM; 3349 BP. XX AC LN877303; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*04:01new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3349 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 655532e23d89c98d6c3ad0544edcdba2. DR IMGT/HLA; HLA-C*04:01:01:06; HLA13527. XX FH Key Location/Qualifiers FH FT source 1..3349 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300106" FT /db_xref="taxon:9606" FT CDS join(284..356,487..756,1003..1278,1866..2141,2263..2382, FT 2822..2854,2962..3009,3174..3178) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q5D1W8" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q5D1W8" FT /protein_id="CUA55046.1" FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFSTSVSWPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPREPWVEQEGPEYWDRETQKYKRQAQADRVNLRK FT LRGYYNQSEDGSHTLQRMFGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWKPSSQPTIPIVGIVAGLAVLAVLAVLGAMVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT exon <284..356 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=1 FT intron 357..486 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=1 FT exon 487..756 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=2 FT intron 757..1002 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=2 FT exon 1003..1278 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=3 FT intron 1279..1865 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=3 FT exon 1866..2141 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=4 FT intron 2142..2262 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=4 FT exon 2263..2382 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=5 FT intron 2383..2821 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=5 FT exon 2822..2854 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=6 FT intron 2855..2961 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=6 FT exon 2962..3009 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=7 FT intron 3010..3173 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=7 FT exon 3174..>3178 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=8 XX SQ Sequence 3349 BP; 627 A; 974 C; 1046 G; 702 T; 0 other; aatcaggacg aagtcccagg tcccgggcgg ggctctcagg gtctcaggct ccaagggccg 60 tgtctgcact ggggaggcgc cgcgttgggg attctccact cccctgagtt tcacttcttc 120 tcccaacctg cgtcgggtcc ttcttcctga atactcatga cgcgtcccca attcccactc 180 ccattgggtg tcgggttcta gagaagccaa tcagcgtctc cgcagtcccg gttctaaagt 240 ccccagtcac ccacccggac tcagattctc cccagacgcc gagatgcggg tcatggcgcc 300 ccgaaccctc atcctgctgc tctcgggagc cctggccctg accgagacct gggccggtga 360 gtgcggggtt gggagggaaa cggcctctgg ggagaggagc gaggggcccg cccggcgagg 420 gcgcaggacc cggggagccg cgcagggagg agggtcgggc gggtctcagc cactcctcgt 480 ccccaggctc ccactccatg aggtatttct ccacatccgt gtcctggccc ggccgcgggg 540 agccccgctt catcgcagtg ggctacgtgg acgacacgca gttcgtgcgg ttcgacagcg 600 acgccgcgag tccaagaggg gagccgcggg agccgtgggt ggagcaggag gggccggagt 660 attgggaccg ggagacacag aagtacaagc gccaggcaca ggctgaccga gtgaacctgc 720 ggaaactgcg cggctactac aaccagagcg aggacggtga gtgaccccgg cccggggcgc 780 aggtcacgac ccctccccat cccccacgga cggcccgggt cgccccgagt ctccccgtct 840 gagatccacc ccgaggctgc ggaacccgcc cagaccctcg accggagaga gccccagtca 900 cctttacccg gtttcatttt cagtttaggc caaaatcccc gcgggttggt cgggactggg 960 gcggggctcg ggggaccggg ctgaccacgg gggcggggcc agggtctcac accctccaga 1020 ggatgtttgg ctgcgacctg gggccggacg ggcgcctcct ccgcgggtat aaccagttcg 1080 cctacgacgg caaggattac atcgccctga acgaggatct gcgctcctgg accgccgcgg 1140 acacggcggc tcagatcacc cagcgcaagt gggaggcggc ccgtgaggcg gagcagcgga 1200 gagcctacct ggagggcacg tgcgtggagt ggctccgcag atacctggag aacgggaagg 1260 agacgctgca gcgcgcgggt accaggggca gtggggagcc ttccccatct cccgtagatc 1320 tcccgggatg gcctcccacg aggaggggag gaaaatggga tcagcgctag aatatcgccc 1380 tcccttgaat ggagaatggg atgagttttc ctgagtttcc tctgagggcc ccctctgctc 1440 tctaggacaa ttaagggatg aagtccttga ggaaatggag gggaagacag tccctggaat 1500 actgatcagg ggtccccttt gaccactttg accactgcag cagctgtggt caggctgctg 1560 acctttctct caggccttgt tctctgcctg acgctcaatg tgtttgaagg tttgattcca 1620 gcttttctga gtccttcggc ctccactcag gtcaggacca gaagtcgctg ttcctccctc 1680 agagactaga actttccaat gaataggaga ttatcccagg tgcctgtgtc caggctggcg 1740 tctgggttct gtgccccctt ccccacccca ggtgtcctgt ccattctcag gatggtcaca 1800 tgggcgctgt tggagtgtcg caagagagat acaaagtgtc tgaattttct gactcttccc 1860 atcagaacac ccaaagacac acgtgaccca ccatcccgtc tctgaccatg aggccaccct 1920 gaggtgctgg gccctgggct tctaccctgc ggagatcaca ctgacctggc agtgggatgg 1980 ggaggaccaa actcaggaca ccgagcttgt ggagaccagg ccagcaggag atggaacctt 2040 ccagaagtgg gcagctgtgg tggtgccttc tggagaagag cagagataca cgtgccatgt 2100 tcagcacgag gggctgccgg agcccctcac cctgagatgg agtaaggagg gggatgaggg 2160 gtgatgtgtc ttctcaggga aagcagaagt cctggagccc ttcagccggg tcagggctga 2220 ggcttggagg tcagggcccc tcaccttccc ctcctttccc agagccgtct tcccagccca 2280 ccatccccat cgtgggcatc gttgctggcc tggctgtcct ggctgtccta gctgtcctag 2340 gagctatggt ggctgttgtg atgtgtagga ggaagagctc aggtagggaa ggggtgagga 2400 gtggggtctg ggttttcttg ttccactggg agtttcaagc cccaggtaga agtgtgcccc 2460 acctcgttac tggaagcacc atccacacgt gggccatccc agcctgggac cctgtgtgcc 2520 agcacttact ctgttgtgaa gcacatgaca atgaaggaca gatgtatcac cttgatgatt 2580 atggtgttgg ggtccttgat tccagcattc atgagtcagg ggaaggtccc tgctaaggac 2640 agaccttagg agggcagttg cttcagaacc cacagctgct ttccccgtgt ttcctgatcc 2700 tgccctgggt ctgcagtcat agttctggaa acttctcttg ggtccaagac taggaggttc 2760 ccctaagatc gcatggccct gcctcctccc tgtcccctca cagggcattt tcttcccaca 2820 ggtggaaaag gagggagctg ctctcaggct gcgtgtaagt gatggcggtg ggcgtgtgga 2880 ggagctcacc caccccataa ttcctcttgt cccacatctc ctgcgggctc tgaccaggtc 2940 tttttttttg ttctacccca gccagcaaca gtgcccaggg ctctgatgag tctctcatcg 3000 cttgtaaagg tgagattctg gggagctgaa gtggtcgggg gtggggcaga gggaaaaggc 3060 ctaggtaatg gggatccttt gattgggacg tttcgaatgt gtggtgagct gttcagagtg 3120 tcatcactta ccatgactga cctgaatttg ttcatgacta ttgtgttctg tagcctgaga 3180 cagctgcctg tgtgggactg agatgcagga tttcttcaca cctctccttt gtgacttcaa 3240 gagcctctgg catctctttc tgcaaaggca tctgaatgtg tctgcgttcc tgttagcata 3300 atgtgaggag gtggagagac agcccacccc cgtgtccacc gtgacccct 3349 // ID LN877304; SV 2; linear; genomic DNA; STD; HUM; 3323 BP. XX AC LN877304; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*44:02new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3323 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; dae2b8abe4a3d07273b7f0d29744eb7e. DR IMGT/HLA; HLA-B*44:229; HLA14079. XX FH Key Location/Qualifiers FH FT source 1..3323 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300106" FT /db_xref="taxon:9606" FT CDS join(285..357,487..756,1000..1275,1851..2126,2220..2336, FT 2778..2810,2917..2960) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*44:02new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A1D0BZT1" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A1D0BZT1" FT /protein_id="CUA55047.1" FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSLSMRYFYTAMSRPGRGEPR FT FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRT FT ALRYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQDAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQDRAYLEGLCVESLRRYLENGKETLQRADPPKTHVTHHPISDHE FT VTLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*44:02new" FT /number=1 FT intron 358..486 FT /gene="HLA-B" FT /allele="HLA-B*44:02new" FT /number=1 FT exon 487..756 FT /gene="HLA-B" FT /allele="HLA-B*44:02new" FT /number=2 FT intron 757..999 FT /gene="HLA-B" FT /allele="HLA-B*44:02new" FT /number=2 FT exon 1000..1275 FT /gene="HLA-B" FT /allele="HLA-B*44:02new" FT /number=3 FT intron 1276..1850 FT /gene="HLA-B" FT /allele="HLA-B*44:02new" FT /number=3 FT exon 1851..2126 FT /gene="HLA-B" FT /allele="HLA-B*44:02new" FT /number=4 FT intron 2127..2219 FT /gene="HLA-B" FT /allele="HLA-B*44:02new" FT /number=4 FT exon 2220..2336 FT /gene="HLA-B" FT /allele="HLA-B*44:02new" FT /number=5 FT intron 2337..2777 FT /gene="HLA-B" FT /allele="HLA-B*44:02new" FT /number=5 FT exon 2778..2810 FT /gene="HLA-B" FT /allele="HLA-B*44:02new" FT /number=6 FT intron 2811..2916 FT /gene="HLA-B" FT /allele="HLA-B*44:02new" FT /number=6 FT exon 2917..>2960 FT /gene="HLA-B" FT /allele="HLA-B*44:02new" FT /number=7 XX SQ Sequence 3323 BP; 614 A; 966 C; 1052 G; 691 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccct cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggccggtg 360 agtgcggggt cgggagggaa atggcctctg tggggaggag agaggggacc gcaggcgggg 420 gcgcaggacc cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc cctctccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg 540 agccccgctt catcaccgtg ggctacgtgg acgacacgct gttcgtgagg ttcgacagcg 600 acgccacgag tccgaggaag gagccgcggg cgccatggat agagcaggag gggccggagt 660 attgggaccg ggagacacag atctccaaga ccaacacaca gacttaccga gagaacctgc 720 gcaccgcgct ccgctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgccccc gaggccgcgg gacccgccca gaccctcgac cggcgagagc cccaggcgcg 900 tttacccggt ttcattttca gttgaggcca aaatccccgc gggttggtcg gggcggggcg 960 gggctcgggg gacggggctg accgcggggc cggggccagg gtctcacatc atccagagga 1020 tgtacggctg cgacgtgggg ccggacgggc gcctcctccg cgggtatgac caggacgcct 1080 acgacggcaa ggattacatc gccctgaacg aggacctgag ctcctggacc gcggcggaca 1140 ccgcggctca gatcacccag cgcaagtggg aggcggcccg tgtggcggag caggacagag 1200 cctacctgga gggcctgtgc gtggagtcgc tccgcagata cctggagaac gggaaggaga 1260 cgctgcagcg cgcgggtacc aggggcagtg gggagccttc cccatctcct ataggtcgcc 1320 ggggatggcc tcccacgaga agaggaggaa aatgggatca gcgctagaat gtcgccctcc 1380 cttgaatgga gaatggcatg agttttcctg agtttcctct gagggccccc tcttctctct 1440 aggacaatta agggatgacg tctctgagga aatggagggg aagacagtcc ctagaatact 1500 gatcaggggt cccctttgac ccctgcagca gccttgggaa ccgtgacttt tcctctcagg 1560 ccttgttctc tgcctcacac tcagtgtgtt tggggctctg attccagcac ttctgagtca 1620 ctttacctcc actcagatca ggagcagaag tccctgttcc ccgctcagag actcgaactt 1680 tccaatgaat aggagattat cccaggtgcc tgcgtccagg ctggtgtctg ggttctgtgc 1740 cccttcccca ccccaggtgt cctgtccatt ctcaggctgg tcacatgggt ggtcctaggg 1800 tgtcccatga gagatgcaaa gcgcctgaat tttctgactc ttcccatcag accccccaaa 1860 gacacatgtg acccaccacc ccatctctga ccatgaggtc accctgaggt gctgggccct 1920 gggcttctac cctgcggaga tcacactgac ctggcagcgg gatggcgagg accaaactca 1980 ggacaccgag cttgtggaga ccagaccagc aggagataga accttccaga agtgggcagc 2040 tgtggtggtg ccttctggag aagagcagag atacacatgc catgtacagc atgaggggct 2100 gccgaagccc ctcaccctga gatggggtaa ggagggggat gaggggtcat atctcttctc 2160 agggaaagca ggagcccttc agcagggtca gggcccctca tcttcccttc ctttcccaga 2220 gccgtcttcc cagtccaccg tccccatcgt gggcattgtt gctggcctgg ctgtcctagc 2280 agttgtggtc atcggagctg tggtcgctgc tgtgatgtgt aggaggaaga gctcaggtag 2340 ggaaggggtg aggggtgggg tctgggtttt cttgtcccac tgggggtttc aagccccagg 2400 tagaagtgtt ccctgcctca ttactgggaa gcagcatcca cacaggggct aacgcagcct 2460 gggaccctgt gtgccagcac ttactctttt gtgcagcaca tgtgacaatg aaggacggat 2520 gtatcacctt ggtggttgtg gtgttggggt cctgattcca gcattcatga gtcaggggaa 2580 ggtccctgct aaggacagac cttaggaggg cagttggtcc aggacccaca cttgctttcc 2640 tcgtgtttcc tgatcctgcc ttgggtctgt agtcatactt ctggaaattc cttttgggtc 2700 caagacgagg aggttcctct aagatctcat ggccctgctt cctcccagtc ccctcacagg 2760 gcattttctt cccacaggtg gaaaaggagg gagctactct caggctgcgt gtaagtgatg 2820 ggggcgggag tgtggaggag ctcacccacc ccataattcc tcctgtccca cgtctcctgc 2880 gggctctgac caggtcctgt ttttgttcta ctccaggcag cgacagtgcc cagggctctg 2940 atgtgtctct cacagcttga aaaggtgaga ttcttggggt ctagagtggg tggggtggca 3000 ggtctggggg tgggtggggc agtggggaaa ggcctgggta atggagattc tttgattggg 3060 atgtttcgcg tgtgtggtgg gctgtttaga gtgtcatcac ttaccatgac taaccagaat 3120 ttgttcatga ctgttgtttt ctgtagcctg agacagctgt cttgtgaggg actgagatgc 3180 aggatttctt cacgcctccc ctttgtgact tcaagagcct ctggcatctc tttctgcaaa 3240 ggcacctgaa tgtgtctgcg tccctgttag cataatgtga ggaggtggag agacagccca 3300 cccccgtgtc caccgtgacc cct 3323 // ID LN877305; SV 2; linear; genomic DNA; STD; HUM; 3336 BP. XX AC LN877305; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*15:01new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3336 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; d3313c391c7923586908f03b3a03544d. DR Ensembl-Gn; ENSG00000232126; homo_sapiens. DR Ensembl-Tr; ENST00000450871; homo_sapiens. DR IMGT/HLA; HLA-B*15:01:01:04; HLA14080. XX FH Key Location/Qualifiers FH FT source 1..3336 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300106" FT /db_xref="taxon:9606" FT CDS join(285..357,487..756,1002..1277,1853..2128,2233..2349, FT 2791..2823,2930..2973) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*15:01new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:D9J307" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:D9J307" FT /protein_id="CUA55048.1" FT /translation="MRVTAPRTVLLLLSGALALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDRETQISKTNTQTYRESLRN FT LRGYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAAREAEQWRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*15:01new" FT /number=1 FT intron 358..486 FT /gene="HLA-B" FT /allele="HLA-B*15:01new" FT /number=1 FT exon 487..756 FT /gene="HLA-B" FT /allele="HLA-B*15:01new" FT /number=2 FT intron 757..1001 FT /gene="HLA-B" FT /allele="HLA-B*15:01new" FT /number=2 FT exon 1002..1277 FT /gene="HLA-B" FT /allele="HLA-B*15:01new" FT /number=3 FT intron 1278..1852 FT /gene="HLA-B" FT /allele="HLA-B*15:01new" FT /number=3 FT exon 1853..2128 FT /gene="HLA-B" FT /allele="HLA-B*15:01new" FT /number=4 FT intron 2129..2232 FT /gene="HLA-B" FT /allele="HLA-B*15:01new" FT /number=4 FT exon 2233..2349 FT /gene="HLA-B" FT /allele="HLA-B*15:01new" FT /number=5 FT intron 2350..2790 FT /gene="HLA-B" FT /allele="HLA-B*15:01new" FT /number=5 FT exon 2791..2823 FT /gene="HLA-B" FT /allele="HLA-B*15:01new" FT /number=6 FT intron 2824..2929 FT /gene="HLA-B" FT /allele="HLA-B*15:01new" FT /number=6 FT exon 2930..>2973 FT /gene="HLA-B" FT /allele="HLA-B*15:01new" FT /number=7 XX SQ Sequence 3336 BP; 616 A; 972 C; 1049 G; 699 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagagcct 60 tgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcaaaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccgt cctcctgctg ctctcgggag ccctggccct gaccgagacc tgggccggtg 360 agtgcggggt cggcagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg 420 gcgcaggacc cggggagccg cgcagggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg 540 agccccgctt catcgcagtg ggctacgtgg acgacaccca gttcgtgagg ttcgacagcg 600 acgccgcgag tccgaggatg gcgccccggg cgccatggat agagcaggag gggccggagt 660 attgggaccg ggagacacag atctccaaga ccaacacaca gacttaccga gagagcctgc 720 ggaacctgcg cggctactac aaccagagcg aggccggtga gtgaccccgg cctggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgccccc ctgaggccgc gggacccgcc caaaccctcg accggcgaga gccccaggcg 900 cgtttacccg gtttcatttt cagttgaggc caaaatcccc gcgggttggt cggggcgggg 960 cggggctcgg gggacggggc tgaccgcggg gcctgggcca gggtctcaca ccctccagag 1020 gatgtacggc tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcatg accagtccgc 1080 ctacgacggc aaggattaca tcgccctgaa cgaggacctg agctcctgga ccgcggcgga 1140 cacggcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgaggcgg agcagtggag 1200 agcctacctg gagggcctgt gcgtggagtg gctccgcaga tacctggaga acgggaagga 1260 gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320 ccggggatgg cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct 1380 cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440 ctaggacaat taagggatga cgtctctgag gaaatggagg ggaagacagt ccctaggata 1500 gtgatcaggg gtcccctttg acccctgcag cagccttggg aaccgtgact tttcctctca 1560 ggccttgttc tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt 1620 cactttacct ccactcagat caggagcaga agtccctgtt ccccgctcag agactcgaac 1680 tttccaatga ataggagatt atcccaggtg cctgcgtcca ggctggtgtc tgggttctgt 1740 gccccttccc caccccaggt gtcctgtcca ttctcaggct ggtcacatgg gtggtcctag 1800 ggtgtcccat gagagatgca aagcgcctga attttctgac tcttcccatc agacccccca 1860 aagacacatg tgacccacca ccccatctct gaccatgagg ccaccctgag gtgctgggcc 1920 ctgggcttct accctgcgga gatcacactg acctggcagc gggatggcga ggaccaaact 1980 caggacaccg agcttgtgga gaccagacca gcaggagata gaaccttcca gaagtgggca 2040 gctgtggtgg tgccttctgg agaagagcag agatacacat gccatgtaca gcatgagggg 2100 ctgccgaagc ccctcaccct gagatggggt aaggaggggg atgaggggtc atatctgttc 2160 tcagggaaag caggagccct tctggagccc ttcagcaggg tcagggcccc tcatcttccc 2220 ctcctttccc agagccatct tcccagtcca ccatccccat cgtgggcatt gttgctggcc 2280 tggctgtcct agcagttgtg gtcatcggag ctgtggtcgc tactgtgatg tgtaggagga 2340 agagctcagg tagggaaggg gtgaggggtg gggtctgggt tttcttgtcc cactgggggt 2400 ttcaagcccc aggtagaagt gttccctgcc tcattactgg gaagcagcat ccacacaggg 2460 gctaacgcag cctgggaccc tgtgtgccag cacttactct tttgtgcagc acatgtgaca 2520 atgaaggaca gatgtatcgc cttgatggtt gtggtgttgg ggtcctgatt ccagcattca 2580 tgagtcaggg gaaggtccct gctaaggaca gaccttagga gggcagttgg tccaggaccc 2640 acacttgctt tcctcgtgtt tcctgatcct gccctgggtc tgtagtcata cttctggaaa 2700 ttccttttgg ttccaagacg aggaggttcc tctaagatct catggtcctg cttcctccca 2760 gtcccctcac aggacatttt cttcccacag gtggaaaagg agggagctac tctcaggctg 2820 cgtgtaagtg gtgggggtgg gagtgtggag gagctcaccc accccataat tcctcctgtc 2880 ccacgtctcc tgcgggctct gaccaggtcc tgtttttgtt ctactccagc cagcgacagt 2940 gcccagggct ctgatgtgtc tctcacagct tgaaaaggtg agattcttgg ggtctagagt 3000 gggtggggtg gcgggtctgg gggtgggtgg ggcagtgggg aaaggcctgg gtaatggaga 3060 ttctttgatt gggatgtttc gcgtgtgtcg tgggctgttc agagtgtcat cacttaccat 3120 gactaaccag aatttgttca tgactgttgt tttctgtagc ctgagacagc tgtcttgtga 3180 gggaccgaga tgcaggattt cttcacgcct cccctttgtg acttcaagag cctctggcat 3240 ctctttctgc aaaggcacct gaatgtgtct gcgtccctgt tagcataatg tgaggaggtg 3300 gagagacagc ccacccttgt gtccactgtg acccct 3336 // ID LN877306; SV 2; linear; genomic DNA; STD; HUM; 3327 BP. XX AC LN877306; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*52:31:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3327 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 0b6fb6dc8843bebcb57af287597af2e7. DR IMGT/HLA; HLA-B*52:31:01; HLA08363. XX FH Key Location/Qualifiers FH FT source 1..3327 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300107" FT /db_xref="taxon:9606" FT CDS join(285..357,487..756,1002..1277,1853..2128,2233..2349, FT 2791..2823,2930..2973) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*52:31:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A1D0C3Z1" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A1D0C3Z1" FT /protein_id="CUA55049.1" FT /translation="MRVTAPRTVLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRI FT ALRYYNQSEAGSHTWQTMYGCDVGSDGRLLRGHNQYAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAAREAEQLRAYLEGLCVEWLRRHLENGKETLQRADPPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*52:31:01" FT /number=1 FT intron 358..486 FT /gene="HLA-B" FT /allele="HLA-B*52:31:01" FT /number=1 FT exon 487..756 FT /gene="HLA-B" FT /allele="HLA-B*52:31:01" FT /number=2 FT intron 757..1001 FT /gene="HLA-B" FT /allele="HLA-B*52:31:01" FT /number=2 FT exon 1002..1277 FT /gene="HLA-B" FT /allele="HLA-B*52:31:01" FT /number=3 FT intron 1278..1852 FT /gene="HLA-B" FT /allele="HLA-B*52:31:01" FT /number=3 FT exon 1853..2128 FT /gene="HLA-B" FT /allele="HLA-B*52:31:01" FT /number=4 FT intron 2129..2232 FT /gene="HLA-B" FT /allele="HLA-B*52:31:01" FT /number=4 FT exon 2233..2349 FT /gene="HLA-B" FT /allele="HLA-B*52:31:01" FT /number=5 FT intron 2350..2790 FT /gene="HLA-B" FT /allele="HLA-B*52:31:01" FT /number=5 FT exon 2791..2823 FT /gene="HLA-B" FT /allele="HLA-B*52:31:01" FT /number=6 FT intron 2824..2929 FT /gene="HLA-B" FT /allele="HLA-B*52:31:01" FT /number=6 FT exon 2930..>2973 FT /gene="HLA-B" FT /allele="HLA-B*52:31:01" FT /number=7 XX SQ Sequence 3327 BP; 621 A; 967 C; 1043 G; 696 T; 0 other; gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagagcct 60 tgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcggatatct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccgt cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggccggtg 360 agtgcggggt cgggagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg 420 gcgcaggacc tgaggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg 540 agccccgctt catcgcagtg ggctacgtgg acgacaccca gttcgtgagg ttcgacagcg 600 acgccgcgag tccgaggacg gagccccggg cgccatggat agagcaggag gggccggagt 660 attgggaccg ggagacacag atctccaaga ccaacacaca gacttaccga gagaacctgc 720 ggatcgcgct ccgctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgcctcc ctgaggccgc gggacccgcc cagaccctcg accggcgaga gccccaggcg 900 cgtttacccg gtttcatttt cagttgaggc caaaatcccc gcgggttggt cggggcgggg 960 cggggctcgg gggacggtgc tgaccgcggg gccggggcca gggtctcaca cttggcagac 1020 gatgtatggc tgcgacgtgg ggtcggacgg gcgcctcctc cgcgggcata accagtacgc 1080 ctacgacggc aaagattaca tcgccctgaa cgaggacctg agctcctgga ccgcggcgga 1140 caccgcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgaggcgg agcagctgag 1200 agcctacctg gagggcctgt gcgtggagtg gctccgcaga cacctggaga acgggaagga 1260 gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320 ccggggatgg cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct 1380 cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440 ctaggacaat taagggatga cgtctctgag gaaatggagg ggaagacagt ccctagaata 1500 ctgatcaggg gtcccctttg acccctgcag cagccttggg aaccgtgact tttcctctca 1560 ggccttgttc tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt 1620 cactttacct ccactcagat caggagcaga agtccctgtt ccccgctcag agactcgaac 1680 tttccaatga ataggagatt atcccaggtg cctgcgtcca ggctggtgtc tgggttctgt 1740 gccccttccc cacaccaggt gtcctgtcca ttctcaggct ggtcacatgg gtggtcctag 1800 ggtgtcccat gagagatgca aagcgcctga attttctgac tcttcccatc agacccccca 1860 aagacacacg tgacccacca ccccgtctct gaccatgagg ccaccctgag gtgctgggcc 1920 ctgggcttct accctgcgga gatcacactg acctggcagc gggatggcga ggaccaaact 1980 caggacactg agcttgtgga gaccagacca gcaggagata gaaccttcca gaagtgggca 2040 gctgtggtgg tgccttctgg agaagagcag agatacacat gccatgtaca gcatgagggg 2100 ctgccgaagc ccctcaccct gagatggggt aaggaggggg atgaggggtc atatctcttc 2160 tcagggaaag caggagccct tctggagccc ttcagcaggg tcagggcccc tcgtcttccc 2220 ctcctttccc agagccatct tcccagtcca ccatccccat cgtgggcatt gttgctggcc 2280 tggctgtcct agcagttgtg gtcatcggag ctgtggtcgc tactgtgatg tgtaggagga 2340 agagctcagg tagggaaggg gtgaggggtg gggtctgggt tttcttgtcc cactgggggt 2400 ttcaagcccc aggtagaagt gttccctgcc tcattactgg gaagcagcat ccacacaggg 2460 gctaacgcag cctgggaccc tgtgtgccag cacttactct tttgtgcagc acatgtgaca 2520 atgaaggacg gatgtatcac cttgatggtt gtggtgttgg ggtcctgatt tcagcattca 2580 tgagtcaggg gaaggtccct gctaaggaca gaccttagga gggcagttgg tccaggaccc 2640 acacttgctt tcctcgtgtt tcctgatcct gccttgggtc tgtagtcata cttctggaaa 2700 ttccttttgg gtccaagacg aggaggttcc tctaagatct catggccctg cttcctccca 2760 gtcccctcac aggacatttt cttcccacag gtggaaaagg agggagctac tctcaggctg 2820 cgtgtaagtg gtgggggtgg gagtgtggag gagctcaccc accccataat tcctcctgtc 2880 ccacgtctcc tgcgggctct gaccaggtcc tgtttttgtt ctactccagc cagcgacagt 2940 gcccagggct ctgatgtgtc tctcacagct tgaaaaggtg agattcttgg ggtctagagt 3000 gggcgggggg ggcggggagg gggcagaggg gaaaggcctg ggtaatggag attctttgat 3060 tgggatgttt cgcgtgtgtc gtgggctgtt cagagtgtca tcacttacca tgactaacca 3120 gaatttgttc atgactgttg ttttctgtag cctgagacag ctgtcttgtg agggactgag 3180 atgcaggatt tcttcactcc tcccctttgt gacttcaaga gcctctggca tctctttctg 3240 caaaggcacc tgaatgtgtc tgcgtccctg ttagcataat gtgaggaggt ggagagacag 3300 cccacccttg tgtccactgt gacccct 3327 // ID LN877307; SV 2; linear; genomic DNA; STD; HUM; 3324 BP. XX AC LN877307; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*37:35 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3324 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; fc347d3a53d43ec762f90d75589b211d. DR IMGT/HLA; HLA-B*37:35; HLA08334. XX FH Key Location/Qualifiers FH FT source 1..3324 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300108" FT /db_xref="taxon:9606" FT CDS join(285..357,487..756,1003..1278,1851..2126,2231..2347, FT 2789..2821,2928..2971) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*37:35" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A1D0BU97" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A1D0BU97" FT /protein_id="CUA55050.1" FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFHTSVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRETQISKTNTQTYREDLRT FT LLRYYNQSEAGSHTIQRMSGCDVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQDRAYLEGTCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*37:35" FT /number=1 FT intron 358..486 FT /gene="HLA-B" FT /allele="HLA-B*37:35" FT /number=1 FT exon 487..756 FT /gene="HLA-B" FT /allele="HLA-B*37:35" FT /number=2 FT intron 757..1002 FT /gene="HLA-B" FT /allele="HLA-B*37:35" FT /number=2 FT exon 1003..1278 FT /gene="HLA-B" FT /allele="HLA-B*37:35" FT /number=3 FT intron 1279..1850 FT /gene="HLA-B" FT /allele="HLA-B*37:35" FT /number=3 FT exon 1851..2126 FT /gene="HLA-B" FT /allele="HLA-B*37:35" FT /number=4 FT intron 2127..2230 FT /gene="HLA-B" FT /allele="HLA-B*37:35" FT /number=4 FT exon 2231..2347 FT /gene="HLA-B" FT /allele="HLA-B*37:35" FT /number=5 FT intron 2348..2788 FT /gene="HLA-B" FT /allele="HLA-B*37:35" FT /number=5 FT exon 2789..2821 FT /gene="HLA-B" FT /allele="HLA-B*37:35" FT /number=6 FT intron 2822..2927 FT /gene="HLA-B" FT /allele="HLA-B*37:35" FT /number=6 FT exon 2928..>2971 FT /gene="HLA-B" FT /allele="HLA-B*37:35" FT /number=7 XX SQ Sequence 3324 BP; 616 A; 977 C; 1040 G; 691 T; 0 other; gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagagcct 60 tgtctgcatt ggggaggcgc agcattgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccct cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggctggtg 360 agtgcggggt cggcagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg 420 gcgcaggacc cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttcc acacctccgt gtcccggccc ggccgcgggg 540 agccccgctt catctcagtg ggctacgtgg acgacaccca gttcgtgagg ttcgacagcg 600 acgccgcgag tccgaggacg gagccccggg cgccgtggat agagcaggag gggccggagt 660 attgggaccg ggagacacag atctccaaga ccaacacaca gacttaccga gaggacctgc 720 ggaccctgct ccgctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgccccc ctgaggccgc gggacccgcc cagaccctcg accggcgaga gccccaggcg 900 cgtttacccg gtttcatttt cagttgaggc caaaatcccc gcgggttggt cggggcgggg 960 cggggctcgg ggggacgggg ctgaccgcgg ggccggggcc agggtctcac accatccaga 1020 ggatgtctgg ctgcgacgtg gggccggacg ggcgcctcct ccgcgggcat gaccagtccg 1080 cctacgacgg caaggattac atcgccctga acgaggacct gagctcctgg accgcggcgg 1140 acaccgcggc tcagatcacc cagcgcaagt gggaggcggc ccgtgtggcg gagcaggaca 1200 gagcctacct ggagggcacg tgcgtggagt ggctccgcag atacctggag aacgggaagg 1260 agacgctgca gcgcgcgggt accaggggca gtggggagcc ttccccatct cctataggtc 1320 gccggggatg gcctcccacg agaagaggag gaaaatggga tcagcgctag aatgtcgccc 1380 tcccttgaat ggagaatggc atgagttttc ctgagtttcc tctgagggcc ccctcttctc 1440 tctaggacaa ttaagggatg acgtctctga ggaaatggag gggaagacag tccctagaat 1500 actgatcagg ggtccccttt gacccctgca gcagccttgg gaaccatgac ttttcctctc 1560 aggccttgtt ctctgcctca cactcagtgt gtttggggct ctgattccag cacttctgag 1620 tcactttacc tccactcaga tcaggagcag aagtctctgt tccccgctca gagactcgaa 1680 ctttccaatg aatagattat cccaggtgcc tgcgtccagg ctggtgtctg ggttctgtgc 1740 cccttcccca ccccaggtgt cctgtccatt ctcaggctgg tcacatgggt ggtcctaggg 1800 tgtcccatga gagatgcaaa gcgcctgaat tttctgactc ttcccatcag accccccaaa 1860 gacacatgtg acccaccacc ccatctctga ccatgaggcc accctgaggt gctgggccct 1920 gggcttctac cctgcggaga tcacactgac ctggcagcgg gatggcgagg accaaactca 1980 ggacaccgag cttgtggaga ccagaccagc aggagataga accttccaga agtgggcagc 2040 tgtggtggtg ccttctggag aagagcagag atacacatgc catgtacagc atgaggggct 2100 gccgaagccc ctcaccctga gatggggtaa ggagggggat gaggggtcat atctcttctc 2160 agggaaagca ggagcccttc tggagccctt cagcagggtc aggacccctc atcttcccct 2220 cctttcccag agccatcttc ccagtccacc atccccatcg tgggcattgt tgctggcctg 2280 gctgtcctag cagttgtggt catcggagct gtggtcgcta ctgtgatgtg taggaggaag 2340 agctcaggta gggaaggggt gaggggtggg gtctgggttt tcttgtccca ctgggggttt 2400 caagccccag gtagaagtgt tccctgcctc attactggga agcagcatcc acacaggggc 2460 taacgcagcc tgggaccctg tgtgccagca cttactcttt tgtgcagcac atgtgacaat 2520 gaaggacgga tgtatcacct tgatggttgt ggtgttgggg tcctgattcc agcattcatg 2580 agtcagggga aggtccctgc taaggacaga ccttaggagg gcagttggtc caggacccac 2640 acttgctttc ctcgtgtttc ctgatcctgc cttgggtctg tagtcatact tctggaaatt 2700 ccttttggtt ccaagacgag gaggttcctc taagatctca tggccctgct tcctcccagt 2760 cccctcacag gacattttct tcccacaggt ggaaaaggag ggagctactc tcaggctgcg 2820 tgtaagtggt gggggtggga gtgtggagga gctcacccac cccataattc ctcctgtccc 2880 acgtctcctg cgggctctga ccaggtcctg tttttgttct actccagcca gcgacagtgc 2940 ccagggctct gatgtgtctc tcacagcttg aaaaggtgag attcttgggg tctagagtgg 3000 gcgggggggc ggggaggggg cagaggggaa aggcctgggt aatggagatt ctttgattgg 3060 gatgtttcgc gtgtgtggtg ggctgttcag agtgtcatca cttaccatga ctaaccagaa 3120 tttgttcatg actgttgttt tctgtagcct gagacagctg tcttgtgagg gactgagatg 3180 caggatttct tcacgcctcc cctttgtgac ttcaagagcc tctggcatct ctttctgcaa 3240 aggcacctga atgtgtctgc gtccctgtta gcataatgtg aggaggtgga gagacagccc 3300 acccccgtgt ccactgtgac ccct 3324 // ID LN877308; SV 2; linear; genomic DNA; STD; HUM; 3322 BP. XX AC LN877308; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*08new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3322 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 8f30f36d315461c772d6adea1167b94e. DR IMGT/HLA; HLA-B*08:26:03; HLA14081. XX FH Key Location/Qualifiers FH FT source 1..3322 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300109" FT /db_xref="taxon:9606" FT CDS join(285..357,486..755,1002..1277,1850..2125,2219..2335, FT 2777..2809,2916..2959) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*08new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A1D0C3E8" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A1D0C3E8" FT /protein_id="CUA55051.1" FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIFKTNTQTDRESLRN FT LRGYYNQSEAGSHTLQSMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAARVAEQDRAYLEGTCVEWLRRYLENGKDTLERADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*08:26:03" FT /number=1 FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*08:26:03" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*08:26:03" FT /number=2 FT intron 756..1001 FT /gene="HLA-B" FT /allele="HLA-B*08:26:03" FT /number=2 FT exon 1002..1277 FT /gene="HLA-B" FT /allele="HLA-B*08:26:03" FT /number=3 FT intron 1278..1849 FT /gene="HLA-B" FT /allele="HLA-B*08:26:03" FT /number=3 FT exon 1850..2125 FT /gene="HLA-B" FT /allele="HLA-B*08:26:03" FT /number=4 FT intron 2126..2218 FT /gene="HLA-B" FT /allele="HLA-B*08:26:03" FT /number=4 FT exon 2219..2335 FT /gene="HLA-B" FT /allele="HLA-B*08:26:03" FT /number=5 FT intron 2336..2776 FT /gene="HLA-B" FT /allele="HLA-B*08:26:03" FT /number=5 FT exon 2777..2809 FT /gene="HLA-B" FT /allele="HLA-B*08:26:03" FT /number=6 FT intron 2810..2915 FT /gene="HLA-B" FT /allele="HLA-B*08:26:03" FT /number=6 FT exon 2916..>2959 FT /gene="HLA-B" FT /allele="HLA-B*08:26:03" FT /number=7 XX SQ Sequence 3322 BP; 612 A; 967 C; 1049 G; 694 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccctgagtt tcacttcttc 120 tcccaacttg tgtcgggtcc ttcttccagg atactcgtga cgcatcccca cttcccactc 180 ccattgggtg tcggatatct agagaagcca atcagcgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagagtct cctcagacgc cgagatgctg gtcatggcgc 300 cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc gggagggaaa tggcctctgc cgggaggagc gaggggaccg caggcggggg 420 cgcaggacct gaggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcta caccgccatg tcccggcccg gccgcgggga 540 gccccgcttc attgcagtgg gctacgtgga cgacacgcag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggagta 660 ttgggaccgg aacacacaga tcttcaagac caacacacag actgaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacggacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg gggacggggc tgaccgcggg gccggggcca gggtctcaca ccctccagag 1020 catgtacggc tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcata accagtacgc 1080 ctacgacggc aaggattaca tcgccctgaa cgaggacctg cgctcctgga ccgcggcgga 1140 caccgcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcaggacag 1200 agcctacctg gagggcacgt gcgtggagtg gctccgcaga tacctggaga acgggaagga 1260 cacgctggag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320 ccggggatgg cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct 1380 cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440 ctagacaatt aagggatgac gtctctgagg aaatggaggg gaagacagtc cctagaatac 1500 tgatcagggg tcccctttga cccctgcagc agccttggga accgtgactt ttcctctcag 1560 gccttgttct ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc 1620 actttacctc cactcagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact 1680 ttccaatgaa taggagatta tcccaggtgc ctgcatccgc tggtgtctgg gttctgtgcc 1740 ccttccccac cccaggtgtc ctgtccattc tcaggctggt cacatgggtg gtcctagggt 1800 gtgccatgag agatgcaaag cgcctgaatt ttctgactct tcccatcaga ccccccaaag 1860 acacacgtga cccaccaccc catctctgac catgaggcca ccctgaggtg ctgggccctg 1920 ggcttctacc ctgcggagat cacactgacc tggcagcggg atggcgagga ccaaactcag 1980 gacactgagc ttgtggagac cagaccagca ggagatagaa ccttccagaa gtgggcagct 2040 gtggtggtgc cttctggaga agagcagaga tacacatgcc atgtacagca tgaggggctg 2100 ccgaagcccc tcaccctgag atggggtaag gagggggatg aggggtcata tctcttctca 2160 gggaaagcag gagcccttca gcagggtcag ggcccctcat cttcccctcc tttcccagag 2220 ccgtcttccc agtccaccgt ccccatcgtg ggcattgttg ctggcctggc tgtcctagca 2280 gttgtggtca tcggagctgt ggtcgctgct gtgatgtgta ggaggaagag ctcaggtagg 2340 gaaggggtga ggggtggggt ctgggttttc ttgtcccact gggggtttca agccccaggt 2400 agaagtgttc cctgcctcat tactgggatg cagcatccac acaggggcta acgcagcctg 2460 ggaccctgtg tgccagcact tactcttttg tgcagcacat gtgacaatga aggacggatg 2520 tatcaccttg gtggttgtgg tgttggggtc ctgattccag cattcatgag tcaggggaag 2580 gtccctgcta aggacagacc ttaggagggc agttggtcca ggacccacac ttgctttcct 2640 cgtgtttcct gatcctgcct tgggtctgta gtcatacttc tggaaattcc ttttgggtcc 2700 aagacgagga ggttcctcta agatctcatg gccctgcttc ctcccagtcc cctcacaggg 2760 cattttcttc ccacaggtgg aaaaggaggg agctactctc aggctgcgtg taagtgatgg 2820 gggtgggagt gtggaggagc tcacccaccc cataattcct cctgtcccac gtctcctgcg 2880 ggctctgacc aggtcctgtt tttgttctac tccaggcagc gacagtgccc agggctctga 2940 tgtgtctctc acagcttgaa aaggtgagat tcttggggtc tagagtgggt ggggtggcgg 3000 gtctgggggt gggtggggca gtggggaaag gcctgggtaa tggagattct ttgattggga 3060 tgtttcgcgt gtgtggtggg ctgtttagag tgtcatcact taccatgact aaccagaatt 3120 tgttcatgac tgttgttttc tgtagcctga gacagctgtc ttgtgaggga ctgagatgca 3180 ggatttcttc acgcctcccc tttgtgactt caagagcctc tggcatctct ttctgcaaag 3240 gcacctgaat gtgtctgcgt ccctgttagc ataatgtgag gaggtggaga gacagcccac 3300 ccttgtgtcc actgtgaccc ct 3322 // ID LN877309; SV 2; linear; genomic DNA; STD; HUM; 3323 BP. XX AC LN877309; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*44new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3323 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; e0153d7952403183da67e622d7ce0573. DR IMGT/HLA; HLA-B*44:230; HLA14082. XX FH Key Location/Qualifiers FH FT source 1..3323 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300110" FT /db_xref="taxon:9606" FT CDS join(285..357,487..756,1000..1275,1851..2126,2220..2336, FT 2778..2810,2917..2960) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*44new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A1D0BUD9" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A1D0BUD9" FT /protein_id="CUA55052.1" FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRT FT ALRYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQDRAYLEGLCVESLRRYLENGKETLQRADPPKTHVTHHPISDHE FT VTLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*44:230" FT /number=1 FT intron 358..486 FT /gene="HLA-B" FT /allele="HLA-B*44:230" FT /number=1 FT exon 487..756 FT /gene="HLA-B" FT /allele="HLA-B*44:230" FT /number=2 FT intron 757..999 FT /gene="HLA-B" FT /allele="HLA-B*44:230" FT /number=2 FT exon 1000..1275 FT /gene="HLA-B" FT /allele="HLA-B*44:230" FT /number=3 FT intron 1276..1850 FT /gene="HLA-B" FT /allele="HLA-B*44:230" FT /number=3 FT exon 1851..2126 FT /gene="HLA-B" FT /allele="HLA-B*44:230" FT /number=4 FT intron 2127..2219 FT /gene="HLA-B" FT /allele="HLA-B*44:230" FT /number=4 FT exon 2220..2336 FT /gene="HLA-B" FT /allele="HLA-B*44:230" FT /number=5 FT intron 2337..2777 FT /gene="HLA-B" FT /allele="HLA-B*44:230" FT /number=5 FT exon 2778..2810 FT /gene="HLA-B" FT /allele="HLA-B*44:230" FT /number=6 FT intron 2811..2916 FT /gene="HLA-B" FT /allele="HLA-B*44:230" FT /number=6 FT exon 2917..>2960 FT /gene="HLA-B" FT /allele="HLA-B*44:230" FT /number=7 XX SQ Sequence 3323 BP; 613 A; 970 C; 1051 G; 689 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccct cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggccggtg 360 agtgcggggt cgggagggaa atggcctctg tggggaggag agaggggacc gcaggcgggg 420 gcgcaggacc cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg 540 agccccgctt catcaccgtg ggctacgtgg acgacacgct gttcgtgagg ttcgacagcg 600 acgccacgag tccgaggaag gagccgcggg cgccatggat agagcaggag gggccggagt 660 attgggaccg ggagacacag atctccaaga ccaacacaca gacttaccga gagaacctgc 720 gcaccgcgct ccgctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgccccc gaggccgcgg gacccgccca gaccctcgac cggcgagagc cccaggcgcg 900 tttacccggt ttcattttca gttgaggcca aaatccccgc gggttggtcg gggcggggcg 960 gggctcgggg gacggggctg accgcggggc cggggccagg gtctcacacc ctccagagga 1020 tgtacggctg cgacgtgggg ccggacgggc gcctcctccg cgggcatgac cagtccgcct 1080 acgacggcaa ggattacatc gccctgaacg aggacctgag ctcctggacc gcggcggaca 1140 ccgcggctca gatcacccag cgcaagtggg aggcggcccg tgtggcggag caggacagag 1200 cctacctgga gggcctgtgc gtggagtcgc tccgcagata cctggagaac gggaaggaga 1260 cgctgcagcg cgcgggtacc aggggcagtg gggagccttc cccatctcct ataggtcgcc 1320 ggggatggcc tcccacgaga agaggaggaa aatgggatca gcgctagaat gtcgccctcc 1380 cttgaatgga gaatggcatg agttttcctg agtttcctct gagggccccc tcttctctct 1440 aggacaatta agggatgacg tctctgagga aatggagggg aagacagtcc ctagaatact 1500 gatcaggggt cccctttgac ccctgcagca gccttgggaa ccgtgacttt tcctctcagg 1560 ccttgttctc tgcctcacac tcagtgtgtt tggggctctg attccagcac ttctgagtca 1620 ctttacctcc actcagatca ggagcagaag tccctgttcc ccgctcagag actcgaactt 1680 tccaatgaat aggagattat cccaggtgcc tgcgtccagg ctggtgtctg ggttctgtgc 1740 cccttcccca ccccaggtgt cctgtccatt ctcaggctgg tcacatgggt ggtcctaggg 1800 tgtcccatga gagatgcaaa gcgcctgaat tttctgactc ttcccatcag accccccaaa 1860 gacacatgtg acccaccacc ccatctctga ccatgaggtc accctgaggt gctgggccct 1920 gggcttctac cctgcggaga tcacactgac ctggcagcgg gatggcgagg accaaactca 1980 ggacaccgag cttgtggaga ccagaccagc aggagataga accttccaga agtgggcagc 2040 tgtggtggtg ccttctggag aagagcagag atacacatgc catgtacagc atgaggggct 2100 gccgaagccc ctcaccctga gatggggtaa ggagggggat gaggggtcat atctcttctc 2160 agggaaagca ggagcccttc agcagggtca gggcccctca tcttcccttc ctttcccaga 2220 gccgtcttcc cagtccaccg tccccatcgt gggcattgtt gctggcctgg ctgtcctagc 2280 agttgtggtc atcggagctg tggtcgctgc tgtgatgtgt aggaggaaga gctcaggtag 2340 ggaaggggtg aggggtgggg tctgggtttt cttgtcccac tgggggtttc aagccccagg 2400 tagaagtgtt ccctgcctca ttactgggaa gcagcatcca cacaggggct aacgcagcct 2460 gggaccctgt gtgccagcac ttactctttt gtgcagcaca tgtgacaatg aaggacggat 2520 gtatcacctt ggtggttgtg gtgttggggt cctgattcca gcattcatga gtcaggggaa 2580 ggtccctgct aaggacagac cttaggaggg cagttggtcc aggacccaca cttgctttcc 2640 tcgtgtttcc tgatcctgcc ttgggtctgt agtcatactt ctggaaattc cttttgggtc 2700 caagacgagg aggttcctct aagatctcat ggccctgctt cctcccagtc ccctcacagg 2760 gcattttctt cccacaggtg gaaaaggagg gagctactct caggctgcgt gtaagtgatg 2820 ggggcgggag tgtggaggag ctcacccacc ccataattcc tcctgtccca cgtctcctgc 2880 gggctctgac caggtcctgt ttttgttcta ctccaggcag cgacagtgcc cagggctctg 2940 atgtgtctct cacagcttga aaaggtgaga ttcttggggt ctagagtggg tggggtggca 3000 ggtctggggg tgggtggggc agtggggaaa ggcctgggta atggagattc tttgattggg 3060 atgtttcgcg tgtgtggtgg gctgtttaga gtgtcatcac ttaccatgac taaccagaat 3120 ttgttcatga ctgttgtttt ctgtagcctg agacagctgt cttgtgaggg actgagatgc 3180 aggatttctt cacgcctccc ctttgtgact tcaagagcct ctggcatctc tttctgcaaa 3240 ggcacctgaa tgtgtctgcg tccctgttag cataatgtga ggaggtggag agacagccca 3300 cccccgtgtc caccgtgacc cct 3323 // ID LN877310; SV 2; linear; genomic DNA; STD; HUM; 3325 BP. XX AC LN877310; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*27:02:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3325 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; f0ebe96def74852cf78f644f02094b38. DR IMGT/HLA; HLA-B*27:02:01:01; HLA00221. XX FH Key Location/Qualifiers FH FT source 1..3325 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="BRUG" FT /db_xref="taxon:9606" FT CDS join(285..357,487..756,1001..1276,1852..2127,2221..2337, FT 2779..2811,2918..2961) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*27:02:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A1C3PHU5" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A1C3PHU5" FT /protein_id="CUA55053.1" FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFHTSVSRPGRGEPR FT FITVGYVDDTLFVRFDSDAASPREEPRAPWIEQEGPEYWDRETQICKAKAQTDRENLRI FT ALRYYNQSEAGSHTLQNMYGCDVGPDGRLLRGYHQDAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGECVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*27:02:01" FT /number=1 FT intron 358..486 FT /gene="HLA-B" FT /allele="HLA-B*27:02:01" FT /number=1 FT exon 487..756 FT /gene="HLA-B" FT /allele="HLA-B*27:02:01" FT /number=2 FT intron 757..1000 FT /gene="HLA-B" FT /allele="HLA-B*27:02:01" FT /number=2 FT exon 1001..1276 FT /gene="HLA-B" FT /allele="HLA-B*27:02:01" FT /number=3 FT intron 1277..1851 FT /gene="HLA-B" FT /allele="HLA-B*27:02:01" FT /number=3 FT exon 1852..2127 FT /gene="HLA-B" FT /allele="HLA-B*27:02:01" FT /number=4 FT intron 2128..2220 FT /gene="HLA-B" FT /allele="HLA-B*27:02:01" FT /number=4 FT exon 2221..2337 FT /gene="HLA-B" FT /allele="HLA-B*27:02:01" FT /number=5 FT intron 2338..2778 FT /gene="HLA-B" FT /allele="HLA-B*27:02:01" FT /number=5 FT exon 2779..2811 FT /gene="HLA-B" FT /allele="HLA-B*27:02:01" FT /number=6 FT intron 2812..2917 FT /gene="HLA-B" FT /allele="HLA-B*27:02:01" FT /number=6 FT exon 2918..>2961 FT /gene="HLA-B" FT /allele="HLA-B*27:02:01" FT /number=7 XX SQ Sequence 3325 BP; 609 A; 966 C; 1056 G; 694 T; 0 other; gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagagcct 60 tgtctgcatt ggggaggcgc agcattgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccct cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggctggtg 360 agtgcggggt cggcagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg 420 gcgcaggacc cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttcc acacctccgt gtcccggccc ggccgcgggg 540 agccccgctt catcaccgtg ggctacgtgg acgacacgct gttcgtgagg ttcgacagcg 600 acgccgcgag tccgagagag gagccgcggg cgccgtggat agagcaggag gggccggagt 660 attgggaccg ggagacacag atctgcaagg ccaaggcaca gactgaccga gagaacctgc 720 ggatcgcgct ccgctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgccccc gaggccgcgg gacccgccca gaccctcgac cggcgagagc cccaggcgcg 900 tttacccggt ttcattttca gttgaggcca aaatccccgc gggttggtcg gggcggggcg 960 gggctcgggg ggacggggct gaccgcgggg gcggggccag ggtctcacac cctccagaat 1020 atgtatggct gcgacgtggg gccggacggg cgcctcctcc gcgggtacca ccaggacgcc 1080 tacgacggca aggattacat cgccctgaac gaggacctga gctcctggac cgccgcggac 1140 acggcggctc agatcaccca gcgcaagtgg gaggcggccc gtgtggcgga gcagctgaga 1200 gcctacctgg agggcgagtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag 1260 acgctgcagc gcgcgggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc 1320 cggggatggc ctcccacgag aagaggagga aaatgggatc agcgctagaa tgtcgccctc 1380 ccttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc 1440 taggacaatt aagggatgac gtctctgagg aaatggaggg gaagacagtc cctagaatac 1500 tgatcagggg tcccctttga cccctgcagc agccttggga accgtgactt ttcctctcag 1560 gccttgttct ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc 1620 actttacctc cactcagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact 1680 ttccaatgaa taggagatta tcccaggtgc ctgcgtccag gctggtgtct gggttctgtg 1740 ccccttcccc accccaggtg tcctgtccat tctcaggctg gtcacatggg tggtcctagg 1800 gtgtcccatg agagatgcaa agcgcctgaa ttttctgact cttcccatca gaccccccaa 1860 agacacacgt gacccaccac cccatctctg accatgaggc caccctgagg tgctgggccc 1920 tgggcttcta ccctgcggag atcacactga cctggcagcg ggatggcgag gaccaaactc 1980 aggacactga gcttgtggag accagaccag caggagatag aaccttccag aagtgggcag 2040 ctgtggtggt gccttctgga gaagagcaga gatacacatg ccatgtacag catgaggggc 2100 tgccgaagcc cctcaccctg agatggggta aggaggggga tgaggggtca tatctcttct 2160 cagggaaagc aggagccctt cagcagggtc agggcccctc atcttccctt cctttcccag 2220 agccgtcttc ccagtccacc gtccccatcg tgggcattgt tgctggcctg gctgtcctag 2280 cagttgtggt catcggagct gtggtcgctg ctgtgatgtg taggaggaag agctcaggta 2340 gggaaggggt gaggggtggg gtctgagttt tcttgtccca ctgggggttt caagccccag 2400 gtagaagtgt tccctgcctc attactggga agcagcatcc acacaggggc taacgcagcc 2460 tgggaccctg tgtgccagca cttactcttt tgtgcagcac atgtgacaat gaaggacgga 2520 tgtatcacct tggtggttgt ggtgttgggg tcctgattcc agcattcatg agtcagggga 2580 aggtccctgc taaggacaga ccttaggagg gcagttggtc caggacccac acttgctttc 2640 ctcgtgtttc ctgatcctgc cttgggtctg tagtcatact tctggaaatt ccttttgggt 2700 ccaagacgag gaggttcctc taagatctca tggccctgct tcctcccagt cccctcacag 2760 ggcattttct tcccacaggt ggaaaaggag ggagctactc tcaggctgcg tgtaagtgat 2820 gggggtggga gtgtggagga gctcacccac cccctaattc ctcctgtccc acgtctcctg 2880 cgggctctga ccaggtcctg tttttgttct actccaggca gcgacagtgc ccagggctct 2940 gatgtgtctc tcacagcttg aaaaggtgag attcttgggg tctagagtgg gtggggtggc 3000 aggtctgggg gtgggtgggg cagtggggaa aggcctgggt aatggagatt ctttgattgg 3060 gatgtttcgc gtgtgtggtg ggctgtttag actgtcatca cttaccatga ctaaccagaa 3120 tttgttcatg actgttgttt tctgtagcct gagacagctg tcttgtgagg gactgagatg 3180 caggatttct tcacgcctcc cctttgtgac ttcaagagcc tctggcatct ctttctgcaa 3240 aggcacctga atgtgtctgc gtccctgtta gcataatgtg aggaggtgga gagaccagcc 3300 cacccccgtg tccactgtga cccct 3325 // ID LN877312; SV 2; linear; genomic DNA; STD; HUM; 3314 BP. XX AC LN877312; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-A gene for MHC class I antigen, allele HLA-A*25:01:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3314 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 35eb3dca9260f05700e4917b247234af. DR IMGT/HLA; HLA-A*25:01:01:01; HLA00071. XX FH Key Location/Qualifiers FH FT source 1..3314 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300111" FT /db_xref="taxon:9606" FT CDS join(301..373,504..773,1015..1290,1891..2166,2266..2382, FT 2821..2853,2996..3043,3213..3217) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-A" FT /allele="HLA-A*25:01:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:I3ZN79" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:I3ZN79" FT /protein_id="CUA55055.1" FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAHSQTDRESLRI FT ALRYYNQSEDGSHTIQRMYGCDVGPDGRFLRGYQQDAYDGKDYIALNEDLRSWTAADMA FT AQITQRKWETAHEAEQWRAYLEGRCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWASVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVIAGAVVAAVMWRRKSSDRK FT GGSYSQAASSDSAQGSDMSLTACKV" FT exon <301..373 FT /gene="HLA-A" FT /allele="HLA-A*25:01:01" FT /number=1 FT intron 374..503 FT /gene="HLA-A" FT /allele="HLA-A*25:01:01" FT /number=1 FT exon 504..773 FT /gene="HLA-A" FT /allele="HLA-A*25:01:01" FT /number=2 FT intron 774..1014 FT /gene="HLA-A" FT /allele="HLA-A*25:01:01" FT /number=2 FT exon 1015..1290 FT /gene="HLA-A" FT /allele="HLA-A*25:01:01" FT /number=3 FT intron 1291..1890 FT /gene="HLA-A" FT /allele="HLA-A*25:01:01" FT /number=3 FT exon 1891..2166 FT /gene="HLA-A" FT /allele="HLA-A*25:01:01" FT /number=4 FT intron 2167..2265 FT /gene="HLA-A" FT /allele="HLA-A*25:01:01" FT /number=4 FT exon 2266..2382 FT /gene="HLA-A" FT /allele="HLA-A*25:01:01" FT /number=5 FT intron 2383..2820 FT /gene="HLA-A" FT /allele="HLA-A*25:01:01" FT /number=5 FT exon 2821..2853 FT /gene="HLA-A" FT /allele="HLA-A*25:01:01" FT /number=6 FT intron 2854..2995 FT /gene="HLA-A" FT /allele="HLA-A*25:01:01" FT /number=6 FT exon 2996..3043 FT /gene="HLA-A" FT /allele="HLA-A*25:01:01" FT /number=7 FT intron 3044..3212 FT /gene="HLA-A" FT /allele="HLA-A*25:01:01" FT /number=7 FT exon 3213..>3217 FT /gene="HLA-A" FT /allele="HLA-A*25:01:01" FT /number=8 XX SQ Sequence 3314 BP; 630 A; 958 C; 1027 G; 699 T; 0 other; caggagcaga ggggtcaggg cgaagtccca gggccccagg cgtggctctc agggtctcag 60 gccccgaagg cggtatatgg attggggagt cccagccttg gggattcccc aactccgcag 120 tttcttttct ccctctccca acctatgtag ggtccttctt cctggatact cacgacgcgg 180 acccagttct cactcccatt gggtgtcggg tttccagaga agccaatcag tgtcgtcgcg 240 gtcgcggttc taaagtccgc acgcacccac cgggactcag attctcccca gacgccgagg 300 atggccgtca tggcgccccg aaccctcgtc ctgctactct cgggggccct ggccctgacc 360 cagacctggg cgggtgagtg cggggtcggg agggaaacgg cctctgtggg gagaagcaag 420 gggcccgccc ggcgggggcg caggacccgg gaagccgcgc ctggaggagg gtcgggcggg 480 tctcagccac tcctcgcccc caggctccca ctccatgagg tatttctaca cctccgtgtc 540 ccggcccggc cgcggggagc cccgcttcat cgccgtgggc tacgtggacg acacgcagtt 600 cgtgcggttc gacagcgacg ccgcgagcca gaggatggag ccgcgggcgc cgtggataga 660 gcaggagggg ccggagtatt gggaccggaa cacacggaat gtgaaggccc actcacagac 720 tgaccgagag agcctgcgga tcgcgctccg ctactacaac cagagcgagg acggtgagtg 780 accccggccc ggggcgcagg tcacgacccc tcatccccca cggacgggcc aggtcgccca 840 cagtctccgg gtccgagatc cgccccgaag ccgcgggacc ccgagaccct tgccccggga 900 gaggcccagg cgcctttacc cggtttcatt ttcagtttag gccaaaaatc cccccgggtt 960 ggtcggggcg gggcggggct cgggggaccg ggctgacctc ggggtccggg ccaggttctc 1020 acaccatcca gaggatgtat ggctgcgacg tggggccgga cgggcgcttc ctccgcgggt 1080 accagcagga cgcttacgac ggcaaggatt acatcgccct gaacgaggac ctgcgctctt 1140 ggaccgcggc ggacatggcg gctcagatca cccagcgcaa gtgggagacg gcccatgagg 1200 cggagcagtg gagagcctac ctggagggcc ggtgcgtgga gtggctccgc agatacctgg 1260 agaacgggaa ggagacgctg cagcgcacgg gtaccagggg ccacggggcg cctccctgat 1320 cgcctgtaga tctcccgggc tggcctccca caaggagggg agacaattgg gaccaacact 1380 agaatatcgc cctccctctg gtcctgaggg agaggaatcc tcctgggttt ccagatcctg 1440 taccagagag tgactctgag gttccgccct gctctctgac acaattaagg gataaaatct 1500 ctgaaggaat gacgggaaga cgatccctcg aatactgatg agtggttccc tttgacacac 1560 accggcagca gccttgggcc cgtgactttt cctctcaggc cttgttctct gcttcacact 1620 caatgtgtgt gggggtctga gtccagcact tctgagtccc tcagcctcca ctcaggtcag 1680 gaccagaagt cgctgttccc tcttcaggga ctagaatttt ccacggaata ggagattatc 1740 ccaggtgcct gtgtccaggc tggtgtctgg gttctgtgct cccttcccca tcccaggtgt 1800 cctgtccatt ctcaagatag ccacatgtgt gctggaggag tgtcccatga cagatgcaaa 1860 atgcctgaat gttctgactc ttcctgacag acgcccccaa gacgcatatg actcaccacg 1920 ctgtctctga ccatgaggcc accctgaggt gctgggccct gagcttctac cctgcggaga 1980 tcacactgac ctggcagcgg gatggggagg accagaccca ggacacggag ctcgtggaga 2040 ccaggcctgc aggggatggg accttccaga agtgggcgtc tgtggtggtg ccttctggac 2100 aggagcagag atacacctgc catgtgcagc atgagggtct gcccaagccc ctcaccctga 2160 gatggggtaa ggagggagac gggggtgtca tgtcttttag ggaaagcagg agcctctctg 2220 acctttagca gggtcagggc ccctcacctt cccctctttt cccagagccg tcttcccagc 2280 ccaccatccc catcgtgggc atcattgctg gcctggttct ctttggagct gtgatcgctg 2340 gagctgtggt cgctgctgtg atgtggagga ggaagagctc aggtggggaa gggatgaagg 2400 gtgggtctga gatttcttgt ctcactgagg gttccaagac ccaggtagaa gtgtgccctg 2460 cctcgttact gggaagcacc atccacaatt atgagcctac ccagcctggg ccctgtgtgc 2520 cagcacttac tcttttgtaa agcacctgtt aaaatgaagg acagatttat caccttgatt 2580 acggcggtga tgggacctga tcccagcagt cacaagtcac aggggaaggt ccctgaggac 2640 cttcaggagg gcggttggtc caggacccac acctgctttc ttcatgtttc ctgatcccgc 2700 cctgggtctg cagtcacaca tttctggaaa cttctctgag gtccaagact tggaggttcc 2760 tctaggacct taaggccctg gctcctttct ggtatctcac aggacatttt cttcccacag 2820 atagaaaagg agggagctac tctcaggctg caagtaagta tgaaggaggc tgatgcctga 2880 ggtccttggg atattgtgtt tgggagcccg tgggggagct cacccacccc acaattcctc 2940 ctctagccac atgttctgtg ggatctgacc aggttctgtt tttgtcctac cccaggcagt 3000 gacagtgccc agggctctga tatgtctctc acagcttgta aaggtgagag cctggagggc 3060 ctgatgtgtg ttgggtgttg ggcggaacag tggacgcagc tgtgctatgg ggtttctttg 3120 cattggatgt attgagcatg cgatgggctg tttaaagtgt gactcctcac tgtgacagat 3180 acgaatttgt tcatgaatat ttttttctat agtgtgagac agctgccttg tgtgggactg 3240 agaggcaaga tttgttcctg cccttccctt tgtgacttga agaaccctga ctttgtttct 3300 gcaaaggcac ctgc 3314 // ID LN877313; SV 2; linear; genomic DNA; STD; HUM; 3300 BP. XX AC LN877313; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-A gene for MHC class I antigen, allele HLA-A*30:02:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3300 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 4fdf17945eef7743df4d8e47381882a1. DR IMGT/HLA; HLA-A*30:02:01:01; HLA00090. XX FH Key Location/Qualifiers FH FT source 1..3300 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300112" FT /db_xref="taxon:9606" FT CDS join(301..373,504..773,1015..1290,1870..2145,2248..2364, FT 2807..2839,2982..3029,3199..3203) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-A" FT /allele="HLA-A*30:02:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q95J07" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q95J07" FT /protein_id="CUA55056.1" FT /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFSTSVSRPGSGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQERPEYWDQETRNVKAHSQTDRENLGT FT LRGYYNQSEAGSHTIQIMYGCDVGSDGRFLRGYEQHAYDGKDYIALNEDLRSWTAADMA FT AQITQRKWEAARRAEQLRAYLEGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRK FT GGSYTQAASSDSAQGSDVSLTACKV" FT exon <301..373 FT /gene="HLA-A" FT /allele="HLA-A*30:02:01" FT /number=1 FT intron 374..503 FT /gene="HLA-A" FT /allele="HLA-A*30:02:01" FT /number=1 FT exon 504..773 FT /gene="HLA-A" FT /allele="HLA-A*30:02:01" FT /number=2 FT intron 774..1014 FT /gene="HLA-A" FT /allele="HLA-A*30:02:01" FT /number=2 FT exon 1015..1290 FT /gene="HLA-A" FT /allele="HLA-A*30:02:01" FT /number=3 FT intron 1291..1869 FT /gene="HLA-A" FT /allele="HLA-A*30:02:01" FT /number=3 FT exon 1870..2145 FT /gene="HLA-A" FT /allele="HLA-A*30:02:01" FT /number=4 FT intron 2146..2247 FT /gene="HLA-A" FT /allele="HLA-A*30:02:01" FT /number=4 FT exon 2248..2364 FT /gene="HLA-A" FT /allele="HLA-A*30:02:01" FT /number=5 FT intron 2365..2806 FT /gene="HLA-A" FT /allele="HLA-A*30:02:01" FT /number=5 FT exon 2807..2839 FT /gene="HLA-A" FT /allele="HLA-A*30:02:01" FT /number=6 FT intron 2840..2981 FT /gene="HLA-A" FT /allele="HLA-A*30:02:01" FT /number=6 FT exon 2982..3029 FT /gene="HLA-A" FT /allele="HLA-A*30:02:01" FT /number=7 FT intron 3030..3198 FT /gene="HLA-A" FT /allele="HLA-A*30:02:01" FT /number=7 FT exon 3199..>3203 FT /gene="HLA-A" FT /allele="HLA-A*30:02:01" FT /number=8 XX SQ Sequence 3300 BP; 637 A; 948 C; 1014 G; 701 T; 0 other; caggagcaga ggggtcaggg cgaagtccca gggccccagg cgtggctctc agggtctcag 60 gccccgaagg cggtgtatgg attggggagt cacagccttg gggattcccc aactccgcag 120 tttcttttct ccctctccca acctacgtag ggtccttcat cctggatact cacgacgcgg 180 acccagttct cactcccatt gggtgtcggg tttccagaga agccaatcag tgtcgtcgcg 240 gtcgctgttc taaagcccgc acgcacccac cgggactcag attctcccca gacgccgagg 300 atggccgtca tggcgccccg aaccctcctc ctgctactct cgggggccct ggccctgacc 360 cagacctggg cgggtgagtg cggggtcggg agggaaaccg cctctgcggg gagaagcaag 420 gggccctcct ggcgggggcg caggaccggg ggagccgcgc cgggaggagg gtcggtcagg 480 tctcagccac tgctcgcccc caggctccca ctccatgagg tatttctcca catccgtgtc 540 ccggcccggc agtggagagc cccgcttcat cgcagtgggc tacgtggacg acacgcagtt 600 cgtgcggttc gacagcgacg ccgcgagcca gaggatggag ccgcgggcgc cgtggataga 660 gcaggagagg cctgagtatt gggaccagga gacacggaat gtgaaggccc actcacagac 720 tgaccgagag aacctgggga ccctgcgcgg ctactacaac cagagcgagg ccggtgagtg 780 accccgcccg ggggcgcagg tcacgacccc tcatccccca cggacgggcc aggtcgccca 840 cagtctccgg gtccgagatc caccccgaag ccgcgggacc ccgagaccct tgacccggga 900 gaggcccagg cgcctttacc cggtttcatt ttcagtttag gccaaaaatt cccccgggtt 960 ggtcggggct gggcggggct cgggggactg ggctgaccgc ggggtcgggg ccaggttctc 1020 acaccatcca gataatgtat ggctgcgacg tggggtcgga cgggcgcttc ctccgcgggt 1080 atgaacagca cgcctacgac ggcaaggatt acatcgccct gaacgaggac ctgcgctctt 1140 ggaccgcggc ggacatggcg gctcagatca cccagcgcaa gtgggaggcg gcccgtcggg 1200 cggagcagtt gagagcctac ctggagggca cgtgcgtgga gtggctccgc agatacctgg 1260 agaacgggaa ggagacgctg cagcgcacgg gtaccagggg ccacggggcg ccttcctgat 1320 cgcctgtaga tctcccgggc tggcctccca caaggagggg agacaattgg gaccaacact 1380 agaatatcac cctccctctg gtcctgaggg agaggaatcc tcctgggttt ccagatcctg 1440 taccagagag tgactctgag gttccgccct gctctctgac tcaattaagg gataaaatct 1500 ctgaaggagt gacgggaaga cgatccctcg aatactgatg agtggttccc tttgacaccg 1560 gcagcagcct tgggcccgtg acttttcctc tcaggccttg ttctctgctt cacactcaat 1620 gtgtgtgggg gtctgagtcc agcacttctg agtccctcag cctccactca ggtcaggacc 1680 agaagtcgct gttcccttct cagggaatag aagattatcc caggtgcctg tgtccaggct 1740 ggtgtctggg ttctgtgctc tcttccccat cccgggtgtc ctgtccattc tcaagatggc 1800 cacatgcgtg ctggtggagt gtcccatgac agatgcaaaa tgcctgaatt ttctgactct 1860 tcccgtcaga cccccccaag acacatatga cccaccaccc catctctgac catgaggcca 1920 ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc tggcagcggg 1980 atggggagga ccagacccag gacacggagc tcgtggagac caggcctgca ggggatggaa 2040 ccttccagaa gtgggcggct gtggtggtgc cttctggaga ggagcagaga tacacctgcc 2100 atgtgcagca tgagggtctg cccaagcccc tcaccctgag atggggtaag gagggagatg 2160 ggggtgtcat gtctcttagg gaaagcagga gcctctctgg agacctttag cagggtcagg 2220 gcccctcacc ttcccctctt ttcccagagc tgtcttccca gcccaccatc cccatcgtgg 2280 gcatcattgc tggcctggtt ctccttggag ctgtgatcac tggagctgtg gtcgctgccg 2340 tgatgtggag gaggaagagc tcaggtggag aaggggtgaa gggtggggtc tgagatttct 2400 tgtctcactg agggttccaa gccccagcta gaaatgtgcc ctgtctcatt actgggaagc 2460 accatccaca atcatgggcc tacccagcct gggccctgtg tgccagcact tactcttttg 2520 taaagcacct gttaaaatga aggacagatt tatcaccttg attacggcag tgatgggacc 2580 tgatcccagc agtcacaagt cacaggggaa ggtccctgag gacagacctc aggagggcta 2640 ttggtccagg acccacacct gctttcttca tgtttcctga tcccgccctg ggtctgcagt 2700 cacacatttc tggaaacttc tctggggtcc aagactagga ggttcctcta ggaccttaag 2760 gccctggctc ctttctggta tctcacagga cattttcttc tcacagatag aaaaggaggg 2820 agttacactc aggctgcaag taagtatgaa ggaggctgat gcctgaggtc cttgggatat 2880 tgtgtttggg agcccatggg ggagctcacc caccccacaa ttcctcctct agccacatct 2940 tctgtgggat ctgaccaggt tctgtttttg ttctacccca ggcagtgaca gtgcccaggg 3000 ctctgatgtg tctctcacag cttgtaaagg tgagagcttg gaggacctaa tgtgtgttgg 3060 gtgttgggca gaacagtgga cacagctgtg ctatggggtt tctttgcatt ggatgtattg 3120 agcatgcgat gggctgttta aggtgtgacc cctcactgtg atggatatga atttgttcat 3180 gaatattttt ttctatagtg tgagacagct gccttgtgtg ggactgagag gcaagagttg 3240 ttcctgccct tccctttgtg acttgaagaa ccctgacttt gtttctgcaa aggcacctgc 3300 // ID LN877314; SV 2; linear; genomic DNA; STD; HUM; 3349 BP. XX AC LN877314; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*08:92 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3349 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 49ce611f2e68fb8d677c23bdaf3c371d. DR IMGT/HLA; HLA-C*08:92; HLA10080. XX FH Key Location/Qualifiers FH FT source 1..3349 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300112" FT /db_xref="taxon:9606" FT CDS join(284..356,487..756,1003..1278,1866..2141,2263..2382, FT 2822..2854,2962..3009,3174..3178) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*08:92" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A0S4T400" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A0S4T400" FT /protein_id="CUA55057.1" FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMRYFYTAVSRPGRGEPR FT FIAVGYVDDTQFVQFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN FT LRGYYNQSEAGSHTLQRMYGCDLGPDGRLLRGYNQFAYDGKDYNALNEDLRSWTAADKA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKKTLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWGPSSQPTIPIVGIVAGLAVLAVLAVLGAVMAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT exon <284..356 FT /gene="HLA-C" FT /allele="HLA-C*08:92" FT /number=1 FT intron 357..486 FT /gene="HLA-C" FT /allele="HLA-C*08:92" FT /number=1 FT exon 487..756 FT /gene="HLA-C" FT /allele="HLA-C*08:92" FT /number=2 FT intron 757..1002 FT /gene="HLA-C" FT /allele="HLA-C*08:92" FT /number=2 FT exon 1003..1278 FT /gene="HLA-C" FT /allele="HLA-C*08:92" FT /number=3 FT intron 1279..1865 FT /gene="HLA-C" FT /allele="HLA-C*08:92" FT /number=3 FT exon 1866..2141 FT /gene="HLA-C" FT /allele="HLA-C*08:92" FT /number=4 FT intron 2142..2262 FT /gene="HLA-C" FT /allele="HLA-C*08:92" FT /number=4 FT exon 2263..2382 FT /gene="HLA-C" FT /allele="HLA-C*08:92" FT /number=5 FT intron 2383..2821 FT /gene="HLA-C" FT /allele="HLA-C*08:92" FT /number=5 FT exon 2822..2854 FT /gene="HLA-C" FT /allele="HLA-C*08:92" FT /number=6 FT intron 2855..2961 FT /gene="HLA-C" FT /allele="HLA-C*08:92" FT /number=6 FT exon 2962..3009 FT /gene="HLA-C" FT /allele="HLA-C*08:92" FT /number=7 FT intron 3010..3173 FT /gene="HLA-C" FT /allele="HLA-C*08:92" FT /number=7 FT exon 3174..>3178 FT /gene="HLA-C" FT /allele="HLA-C*08:92" FT /number=8 XX SQ Sequence 3349 BP; 629 A; 980 C; 1041 G; 699 T; 0 other; gatcaggacg aagtcccagg tcccgggcgg ggctctcagg gtctcaggct ccaagggccg 60 tgtctgcact ggggaggcgc cgcgttgagg attctccact cccctgagtt tcacttcttc 120 ttccaacctg cgtcgggtcc ttcttcctga atactcatga cgcgtcccca attcccactc 180 ccattgggtg tcgggttcta gagaagccaa tcagcgtctc cgcagtcccg gttctaaagt 240 ccccagtcac ccacccggac tcggattctc cccagacgcc gagatgcggg tcatggcgcc 300 ccgaaccctc atcctgctgc tctcgggagc cctggccctg accgagacct gggcctgtga 360 gtgcgaggtt gggagggaaa cggcctctgc ggagaggagc gaggggcccg cccggcgagg 420 gcgcaggacc cggggagccg cgcagggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccgt gtcccggccc ggccgcggag 540 agccccgctt catcgcagtg ggctacgtgg acgacacgca gttcgtgcag ttcgacagcg 600 acgccgcgag tccaagaggg gagccgcggg cgccgtgggt ggagcaggag gggccggagt 660 attgggaccg ggagacacag aagtacaagc gccaggcaca gactgaccga gtgagcctgc 720 ggaacctgcg cggctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac ccctccccat cccccacgga cggcccgggt cgccccgagt ctcccggtct 840 gagatccacc ccgaggctgc ggaacccgcc cagaccctcg accggagaga gccccagtca 900 cctttacccg gtttcatttt cagtttaggc caaaatcccc gcgggttggt cggggctggg 960 gcggggctcg ggggacgggg ctgaccacgg gggcggggcc agggtctcac accctccaga 1020 ggatgtatgg ctgcgacctg gggcccgacg ggcgcctcct ccgcgggtat aaccagttcg 1080 cctacgacgg caaggattac aacgccctga atgaggacct gcgctcctgg accgccgcgg 1140 acaaggcggc tcagatcacc cagcgcaagt gggaggcggc ccgtgaggcg gagcagcgga 1200 gagcctacct ggagggcacg tgcgtggagt ggctccgcag atacctggag aacgggaaga 1260 agacgctgca gcgcgcgggt accaggggca gtggggagcc ttccccatct cctgtagatc 1320 tcccgggatg gcctcccacg aggaggggag gaaaatggga tcagcgctgg aatatcgccc 1380 tcccttgaat ggagaatggg atgagttttc ctgagtttct tctgagggcc ccctctgctc 1440 tctaggacaa ttaagggatg aagtccttga ggaaatggag gggaagacag tccctggaat 1500 actgatcagg ggtccccttt gaccactttg accactgcag cagctgtggt caggctgctg 1560 acctttctct caggccttgt tctctgcctc acgctcaatg tgtttaaagg tttgattcca 1620 acttttctga gtccttcggc ctccactcag gtcaggacca gaagtcgctg ttcctccctc 1680 agagactaga actttccaat gaataggaga ttatcccagg tgcctgtgtc caggctggcg 1740 tctgggttct gtgccccctt ccccacccca ggtgtcctgt ccattctcag gatggtcaca 1800 tgggcactgt tggagtgtcg caagagagat acaaagtgtc tgaattttct gactcttccc 1860 gtcagaacac ccaaagacac acgtgaccca ccatcccgtc tctgaccatg aggccaccct 1920 gaggtgctgg gccctgggct tctaccctgc ggagatcaca ctgacctggc agcgggatgg 1980 cgaggaccaa actcaggaca ccgagcttgt ggagaccagg ccagcaggag atggaacctt 2040 ccagaagtgg gcagctgtgg tggtgccttc tggagaagag cagagataca cgtgccatgt 2100 gcagcacgag gggctgccag agcccctcac cctgagatgg ggtaaggagg gggatgaggg 2160 gtcatgtgtc ttctcaggga aagcagaagt cctggagccc ttcagccggg tcagggctga 2220 ggcttggggg tcagggcccc tcaccttccc ctcctttccc agggccatct tcccagccca 2280 ccatccccat cgtgggcatc gttgctggcc tggctgtcct ggctgtccta gctgtcctag 2340 gagctgtgat ggctgttgtg atgtgtagga ggaagagctc aggtagggaa ggggtgagga 2400 gtggggtctg ggttttcttg tcccactggg agtttcaagc cccaggtaga agtgtgcccc 2460 acctcgttac tggaagcacc atccacacat gggccatccc agcctgggac cctgtgtgct 2520 agcacttact ctgttgtgaa gcacatgaca atgaaggaca gatgtatcac cttgatgatt 2580 atggtgttgg ggtccttgat tccagcattc atgagtcagg ggaaggtccc tgctaaggac 2640 agaccttagg agggcagttg ctccagaacc cacagctgct ttccccgtgt ttcctgatcc 2700 tgccctgggt ctgcagtcat agttctggaa acttctcttg ggtccaagac taggaggttc 2760 ccctaagatc gcatggccct gcctcctccc tgtcccctca cagggcattt tcttcccaca 2820 ggtggaaaag gagggagctg ctctcaggct gcgtgtaagt gatggcggtg ggcgtgtgga 2880 ggagctcacc caccccataa ttcctcttgt cccacatctc ctgcgggctc tgaccaggtc 2940 tttttttttg ttctacccca gccagcaaca gtgcccaggg ctctgatgag tctctcatcg 3000 cttgtaaagg tgagattctg gggagctgaa gtggtcgggg gtggggcaga gggaaaaggc 3060 ctaggtaatg gggatccttt gattgggacg tttcgaatgt gtggtgagct gttcagagtg 3120 tcatcactta ccatgactga cctgaatttg ttcatgacta ttgtgttctg tagcctgaga 3180 cagctgcctg tgtgggactg agatgcagga tttcttcaca cctttccttt gtgacttcaa 3240 gagcctctgg catctctttc tgcaaaggca tctgaatgtg tctgcgttcc tgttagcata 3300 atgtgaggag gtggagagac agcccacccc cgtgtccacc gtgacccct 3349 // ID LN877315; SV 2; linear; genomic DNA; STD; HUM; 3349 BP. XX AC LN877315; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*04:145 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3349 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 621181fb4667567f1949dc5565b98ef4. DR IMGT/HLA; HLA-C*04:145; HLA09176. XX FH Key Location/Qualifiers FH FT source 1..3349 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300113" FT /db_xref="taxon:9606" FT CDS join(284..356,487..756,1003..1278,1866..2141,2263..2382, FT 2822..2854,2962..3009,3174..3178) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*04:145" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A1D0BZT9" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A1D0BZT9" FT /protein_id="CUA55058.1" FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMTYFSTSVSWPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPREPWVEQEGPEYWDRETQKYKRQAQADRVNLRK FT LRGYYNQSEDGSHTLQRMFGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWKPSSQPTIPIVGIVAGLAVLAVLAVLGAMVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT exon <284..356 FT /gene="HLA-C" FT /allele="HLA-C*04:145" FT /number=1 FT intron 357..486 FT /gene="HLA-C" FT /allele="HLA-C*04:145" FT /number=1 FT exon 487..756 FT /gene="HLA-C" FT /allele="HLA-C*04:145" FT /number=2 FT intron 757..1002 FT /gene="HLA-C" FT /allele="HLA-C*04:145" FT /number=2 FT exon 1003..1278 FT /gene="HLA-C" FT /allele="HLA-C*04:145" FT /number=3 FT intron 1279..1865 FT /gene="HLA-C" FT /allele="HLA-C*04:145" FT /number=3 FT exon 1866..2141 FT /gene="HLA-C" FT /allele="HLA-C*04:145" FT /number=4 FT intron 2142..2262 FT /gene="HLA-C" FT /allele="HLA-C*04:145" FT /number=4 FT exon 2263..2382 FT /gene="HLA-C" FT /allele="HLA-C*04:145" FT /number=5 FT intron 2383..2821 FT /gene="HLA-C" FT /allele="HLA-C*04:145" FT /number=5 FT exon 2822..2854 FT /gene="HLA-C" FT /allele="HLA-C*04:145" FT /number=6 FT intron 2855..2961 FT /gene="HLA-C" FT /allele="HLA-C*04:145" FT /number=6 FT exon 2962..3009 FT /gene="HLA-C" FT /allele="HLA-C*04:145" FT /number=7 FT intron 3010..3173 FT /gene="HLA-C" FT /allele="HLA-C*04:145" FT /number=7 FT exon 3174..>3178 FT /gene="HLA-C" FT /allele="HLA-C*04:145" FT /number=8 XX SQ Sequence 3349 BP; 628 A; 975 C; 1044 G; 702 T; 0 other; aatcaggacg aagtcccagg tcccgggcgg ggctctcagg gtctcaggct ccaagggccg 60 tgtctgcact ggggaggcgc cgcgttgggg attctccact cccctgagtt tcacttcttc 120 tcccaacctg cgtcgggtcc ttcttcctga atactcatga cgcgtcccca attcccactc 180 ccattgggtg tcgggttcta gagaagccaa tcagcgtctc cgcagtcccg gttctaaagt 240 ccccagtcac ccacccggac tcagattctc cccagacgcc gagatgcggg tcatggcgcc 300 ccgaaccctc atcctgctgc tctcgggagc cctggccctg accgagacct gggccggtga 360 gtgcggggtt gggagggaaa cggcctctgg ggagaggagc gaggggcccg cccggcgagg 420 gcgcaggacc cggggagccg cgcagggagg agggtcgggc gggtctcagc cactcctcgt 480 ccccaggctc ccactccatg acgtatttct ccacatccgt gtcctggccc ggccgcgggg 540 agccccgctt catcgcagtg ggctacgtgg acgacacgca gttcgtgcgg ttcgacagcg 600 acgccgcgag tccaagaggg gagccgcggg agccgtgggt ggagcaggag gggccggagt 660 attgggaccg ggagacacag aagtacaagc gccaggcaca ggctgaccga gtgaacctgc 720 ggaaactgcg cggctactac aaccagagcg aggacggtga gtgaccccgg cccggggcgc 780 aggtcacgac ccctccccat cccccacgga cggcccgggt cgccccgagt ctccccgtct 840 gagatccacc ccgaggctgc ggaacccgcc cagaccctcg accggagaga gccccagtca 900 cctttacccg gtttcatttt cagtttaggc caaaatcccc gcgggttggt cgggactggg 960 gcggggctcg ggggaccggg ctgaccacgg gggcggggcc agggtctcac accctccaga 1020 ggatgtttgg ctgcgacctg gggccggacg ggcgcctcct ccgcgggtat aaccagttcg 1080 cctacgacgg caaggattac atcgccctga acgaggatct gcgctcctgg accgccgcgg 1140 acacggcggc tcagatcacc cagcgcaagt gggaggcggc ccgtgaggcg gagcagcgga 1200 gagcctacct ggagggcacg tgcgtggagt ggctccgcag atacctggag aacgggaagg 1260 agacgctgca gcgcgcgggt accaggggca gtggggagcc ttccccatct cccgtagatc 1320 tcccgggatg gcctcccacg aggaggggag gaaaatggga tcagcgctag aatatcgccc 1380 tcccttgaat ggagaatggg atgagttttc ctgagtttcc tctgagggcc ccctctgctc 1440 tctaggacaa ttaagggatg aagtccttga ggaaatggag gggaagacag tccctggaat 1500 actgatcagg ggtccccttt gaccactttg accactgcag cagctgtggt caggctgctg 1560 acctttctct caggccttgt tctctgcctg acgctcaatg tgtttgaagg tttgattcca 1620 gcttttctga gtccttcggc ctccactcag gtcaggacca gaagtcgctg ttcctccctc 1680 agagactaga actttccaat gaataggaga ttatcccagg tgcctgtgtc caggctggcg 1740 tctgggttct gtgccccctt ccccacccca ggtgtcctgt ccattctcag gatggtcaca 1800 tgggcgctgt tggagtgtcg caagagagat acaaagtgtc tgaattttct gactcttccc 1860 atcagaacac ccaaagacac acgtgaccca ccatcccgtc tctgaccatg aggccaccct 1920 gaggtgctgg gccctgggct tctaccctgc ggagatcaca ctgacctggc agtgggatgg 1980 ggaggaccaa actcaggaca ccgagcttgt ggagaccagg ccagcaggag atggaacctt 2040 ccagaagtgg gcagctgtgg tggtgccttc tggagaagag cagagataca cgtgccatgt 2100 tcagcacgag gggctgccgg agcccctcac cctgagatgg agtaaggagg gggatgaggg 2160 gtgatgtgtc ttctcaggga aagcagaagt cctggagccc ttcagccggg tcagggctga 2220 ggcttggagg tcagggcccc tcaccttccc ctcctttccc agagccgtct tcccagccca 2280 ccatccccat cgtgggcatc gttgctggcc tggctgtcct ggctgtccta gctgtcctag 2340 gagctatggt ggctgttgtg atgtgtagga ggaagagctc aggtagggaa ggggtgagga 2400 gtggggtctg ggttttcttg ttccactggg agtttcaagc cccaggtaga agtgtgcccc 2460 acctcgttac tggaagcacc atccacacat gggccatccc agcctgggac cctgtgtgcc 2520 agcacttact ctgttgtgaa gcacatgaca atgaaggaca gatgtatcac cttgatgatt 2580 atggtgttgg ggtccttgat tccagcattc atgagtcagg ggaaggtccc tgctaaggac 2640 agaccttagg agggcagttg cttcagaacc cacagctgct ttccccgtgt ttcctgatcc 2700 tgccctgggt ctgcagtcat agttctggaa acttctcttg ggtccaagac taggaggttc 2760 ccctaagatc gcatggccct gcctcctccc tgtcccctca cagggcattt tcttcccaca 2820 ggtggaaaag gagggagctg ctctcaggct gcgtgtaagt gatggcggtg ggcgtgtgga 2880 ggagctcacc caccccataa ttcctcttgt cccacatctc ctgcgggctc tgaccaggtc 2940 tttttttttg ttctacccca gccagcaaca gtgcccaggg ctctgatgag tctctcatcg 3000 cttgtaaagg tgagattctg gggagctgaa gtggtcgggg gtggggcaga gggaaaaggc 3060 ctaggtaatg gggatccttt gattgggacg tttcgaatgt gtggtgagct gttcagagtg 3120 tcatcactta ccatgactga cctgaatttg ttcatgacta ttgtgttctg tagcctgaga 3180 cagctgcctg tgtgggactg agatgcagga tttcttcaca cctctccttt gtgacttcaa 3240 gagcctctgg catctctttc tgcaaaggca tctgaatgtg tctgcgttcc tgttagcata 3300 atgtgaggag gtggagagac agcccacccc cgtgtccacc gtgacccct 3349 // ID LN877316; SV 2; linear; genomic DNA; STD; HUM; 3349 BP. XX AC LN877316; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*04:01:44 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3349 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 5ecdd2e1a2125935a267993d1d750340. DR IMGT/HLA; HLA-C*04:01:44; HLA08827. XX FH Key Location/Qualifiers FH FT source 1..3349 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300114" FT /db_xref="taxon:9606" FT CDS join(284..356,487..756,1003..1278,1866..2141,2263..2382, FT 2822..2854,2962..3009,3174..3178) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*04:01:44" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q5D1W8" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q5D1W8" FT /protein_id="CUA55059.1" FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFSTSVSWPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPREPWVEQEGPEYWDRETQKYKRQAQADRVNLRK FT LRGYYNQSEDGSHTLQRMFGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWKPSSQPTIPIVGIVAGLAVLAVLAVLGAMVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT exon <284..356 FT /gene="HLA-C" FT /allele="HLA-C*04:01:44" FT /number=1 FT intron 357..486 FT /gene="HLA-C" FT /allele="HLA-C*04:01:44" FT /number=1 FT exon 487..756 FT /gene="HLA-C" FT /allele="HLA-C*04:01:44" FT /number=2 FT intron 757..1002 FT /gene="HLA-C" FT /allele="HLA-C*04:01:44" FT /number=2 FT exon 1003..1278 FT /gene="HLA-C" FT /allele="HLA-C*04:01:44" FT /number=3 FT intron 1279..1865 FT /gene="HLA-C" FT /allele="HLA-C*04:01:44" FT /number=3 FT exon 1866..2141 FT /gene="HLA-C" FT /allele="HLA-C*04:01:44" FT /number=4 FT intron 2142..2262 FT /gene="HLA-C" FT /allele="HLA-C*04:01:44" FT /number=4 FT exon 2263..2382 FT /gene="HLA-C" FT /allele="HLA-C*04:01:44" FT /number=5 FT intron 2383..2821 FT /gene="HLA-C" FT /allele="HLA-C*04:01:44" FT /number=5 FT exon 2822..2854 FT /gene="HLA-C" FT /allele="HLA-C*04:01:44" FT /number=6 FT intron 2855..2961 FT /gene="HLA-C" FT /allele="HLA-C*04:01:44" FT /number=6 FT exon 2962..3009 FT /gene="HLA-C" FT /allele="HLA-C*04:01:44" FT /number=7 FT intron 3010..3173 FT /gene="HLA-C" FT /allele="HLA-C*04:01:44" FT /number=7 FT exon 3174..>3178 FT /gene="HLA-C" FT /allele="HLA-C*04:01:44" FT /number=8 XX SQ Sequence 3349 BP; 628 A; 973 C; 1045 G; 703 T; 0 other; aatcaggacg aagtcccagg tcccgggcgg ggctctcagg gtctcaggct ccaagggccg 60 tgtctgcact ggggaggcgc cgcgttgggg attctccact cccctgagtt tcacttcttc 120 tcccaacctg cgtcgggtcc ttcttcctga atactcatga cgcgtcccca attcccactc 180 ccattgggtg tcgggttcta gagaagccaa tcagcgtctc cgcagtcccg gttctaaagt 240 ccccagtcac ccacccggac tcagattctc cccagacgcc gagatgcggg tcatggcgcc 300 ccgaaccctc atcctgctgc tctcgggagc cctggccctg accgagacct gggccggtga 360 gtgcggggtt gggagggaaa cggcctctgg ggagaggagc gaggggcccg cccggcgagg 420 gcgcaggacc cggggagccg cgcagggagg agggtcgggc gggtctcagc cactcctcgt 480 ccccaggctc ccactccatg aggtatttct ccacatccgt gtcctggccc ggccgcgggg 540 agccccgctt catcgcagtg ggctacgtgg acgacacgca gttcgtgcgg ttcgacagcg 600 acgccgcgag tccaagaggg gagccgcggg agccgtgggt ggagcaggag gggccggagt 660 attgggaccg ggagacacag aagtacaagc gccaggcaca ggctgaccga gtgaacctgc 720 ggaaactgcg cggctactac aaccagagcg aggacggtga gtgaccccgg cccggggcgc 780 aggtcacgac ccctccccat cccccacgga cggcccgggt cgccccgagt ctccccgtct 840 gagatccacc ccgaggctgc ggaacccgcc cagaccctcg accggagaga gccccagtca 900 cctttacccg gtttcatttt cagtttaggc caaaatcccc gcgggttggt cgggactggg 960 gcggggctcg ggggaccggg ctgaccacgg gggcggggcc agggtctcac accctccaga 1020 ggatgtttgg ctgcgacctg gggccggacg ggcgcctcct ccgcgggtat aaccagttcg 1080 cctacgacgg caaggattac atcgccctga acgaggatct gcgctcctgg accgccgcgg 1140 acacggcggc tcagatcacc cagcgcaagt gggaggcggc tcgtgaggcg gagcagcgga 1200 gagcctacct ggagggcacg tgcgtggagt ggctccgcag atacctggag aacgggaagg 1260 agacgctgca gcgcgcgggt accaggggca gtggggagcc ttccccatct cccgtagatc 1320 tcccgggatg gcctcccacg aggaggggag gaaaatggga tcagcgctag aatatcgccc 1380 tcccttgaat ggagaatggg atgagttttc ctgagtttcc tctgagggcc ccctctgctc 1440 tctaggacaa ttaagggatg aagtccttga ggaaatggag gggaagacag tccctggaat 1500 actgatcagg ggtccccttt gaccactttg accactgcag cagctgtggt caggctgctg 1560 acctttctct caggccttgt tctctgcctg acgctcaatg tgtttgaagg tttgattcca 1620 gcttttctga gtccttcggc ctccactcag gtcaggacca gaagtcgctg ttcctccctc 1680 agagactaga actttccaat gaataggaga ttatcccagg tgcctgtgtc caggctggcg 1740 tctgggttct gtgccccctt ccccacccca ggtgtcctgt ccattctcag gatggtcaca 1800 tgggcgctgt tggagtgtcg caagagagat acaaagtgtc tgaattttct gactcttccc 1860 atcagaacac ccaaagacac acgtgaccca ccatcccgtc tctgaccatg aggccaccct 1920 gaggtgctgg gccctgggct tctaccctgc ggagatcaca ctgacctggc agtgggatgg 1980 ggaggaccaa actcaggaca ccgagcttgt ggagaccagg ccagcaggag atggaacctt 2040 ccagaagtgg gcagctgtgg tggtgccttc tggagaagag cagagataca cgtgccatgt 2100 tcagcacgag gggctgccgg agcccctcac cctgagatgg agtaaggagg gggatgaggg 2160 gtgatgtgtc ttctcaggga aagcagaagt cctggagccc ttcagccggg tcagggctga 2220 ggcttggagg tcagggcccc tcaccttccc ctcctttccc agagccgtct tcccagccca 2280 ccatccccat cgtgggcatc gttgctggcc tggctgtcct ggctgtccta gctgtcctag 2340 gagctatggt ggctgttgtg atgtgtagga ggaagagctc aggtagggaa ggggtgagga 2400 gtggggtctg ggttttcttg ttccactggg agtttcaagc cccaggtaga agtgtgcccc 2460 acctcgttac tggaagcacc atccacacat gggccatccc agcctgggac cctgtgtgcc 2520 agcacttact ctgttgtgaa gcacatgaca atgaaggaca gatgtatcac cttgatgatt 2580 atggtgttgg ggtccttgat tccagcattc atgagtcagg ggaaggtccc tgctaaggac 2640 agaccttagg agggcagttg cttcagaacc cacagctgct ttccccgtgt ttcctgatcc 2700 tgccctgggt ctgcagtcat agttctggaa acttctcttg ggtccaagac taggaggttc 2760 ccctaagatc gcatggccct gcctcctccc tgtcccctca cagggcattt tcttcccaca 2820 ggtggaaaag gagggagctg ctctcaggct gcgtgtaagt gatggcggtg ggcgtgtgga 2880 ggagctcacc caccccataa ttcctcttgt cccacatctc ctgcgggctc tgaccaggtc 2940 tttttttttg ttctacccca gccagcaaca gtgcccaggg ctctgatgag tctctcatcg 3000 cttgtaaagg tgagattctg gggagctgaa gtggtcgggg gtggggcaga gggaaaaggc 3060 ctaggtaatg gggatccttt gattgggacg tttcgaatgt gtggtgagct gttcagagtg 3120 tcatcactta ccatgactga cctgaatttg ttcatgacta ttgtgttctg tagcctgaga 3180 cagctgcctg tgtgggactg agatgcagga tttcttcaca cctctccttt gtgacttcaa 3240 gagcctctgg catctctttc tgcaaaggca tctgaatgtg tctgcgttcc tgttagcata 3300 atgtgaggag gtggagagac agcccacccc cgtgtccacc gtgacccct 3349 // ID LN877317; SV 2; linear; genomic DNA; STD; HUM; 3354 BP. XX AC LN877317; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*07new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3354 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; b8321e9d4cfbde5942dd6985757e6709. DR IMGT/HLA; HLA-C*07:458; HLA14083. XX FH Key Location/Qualifiers FH FT source 1..3354 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300114" FT /db_xref="taxon:9606" FT CDS join(281..353,484..753,1004..1279,1867..2142,2267..2386, FT 2827..2859,2967..3014,3179..3183) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*07new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A1D0C403" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A1D0C403" FT /protein_id="CUA55060.1" FT /translation="MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQNYKRQAQADRVSLRN FT LRGYYNQSEDGSHTLQRMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA FT AQITQRKLEAARAAEQLRAYLEGTCVEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY FT TCHMQHEGLQEPLTLSWEPSSQPTIPIMGIVAGLAVLVVLAVLGAVVTAMMCRRKSSGG FT KGGSCSQAACSNSAQGSDVSLITCKA" FT exon <281..353 FT /gene="HLA-C" FT /allele="HLA-C*07:458" FT /number=1 FT intron 354..483 FT /gene="HLA-C" FT /allele="HLA-C*07:458" FT /number=1 FT exon 484..753 FT /gene="HLA-C" FT /allele="HLA-C*07:458" FT /number=2 FT intron 754..1003 FT /gene="HLA-C" FT /allele="HLA-C*07:458" FT /number=2 FT exon 1004..1279 FT /gene="HLA-C" FT /allele="HLA-C*07:458" FT /number=3 FT intron 1280..1866 FT /gene="HLA-C" FT /allele="HLA-C*07:458" FT /number=3 FT exon 1867..2142 FT /gene="HLA-C" FT /allele="HLA-C*07:458" FT /number=4 FT intron 2143..2266 FT /gene="HLA-C" FT /allele="HLA-C*07:458" FT /number=4 FT exon 2267..2386 FT /gene="HLA-C" FT /allele="HLA-C*07:458" FT /number=5 FT intron 2387..2826 FT /gene="HLA-C" FT /allele="HLA-C*07:458" FT /number=5 FT exon 2827..2859 FT /gene="HLA-C" FT /allele="HLA-C*07:458" FT /number=6 FT intron 2860..2966 FT /gene="HLA-C" FT /allele="HLA-C*07:458" FT /number=6 FT exon 2967..3014 FT /gene="HLA-C" FT /allele="HLA-C*07:458" FT /number=7 FT intron 3015..3178 FT /gene="HLA-C" FT /allele="HLA-C*07:458" FT /number=7 FT exon 3179..>3183 FT /gene="HLA-C" FT /allele="HLA-C*07:458" FT /number=8 XX SQ Sequence 3354 BP; 619 A; 993 C; 1043 G; 699 T; 0 other; gatcaggacg aagtcccagg tcccgggcgg ggctctcagg gtctcaggct ccaagggccg 60 tgtctgcatt ggggaggcgc cgcgttgggg attctccact cccctgagtt tcacttctcc 120 caacctgcgt cgggtccttc ttcctgaata ctcatgacgc gtccccaatt cccactccca 180 ttgggtgtcg ggttctagag aagccaatca gcgtctccgc agtcccggtt ctaaagtccc 240 cagtcaccca cccggactca cattctcccc agaggccgag atgcgggtca tggcgccccg 300 agccctcctc ctgctgctct cgggaggcct ggccctgacc gagacctggg cctgtgagtg 360 cggggttggg agggaagcgg cctctgcgga gaggagcgag gggcccgccc ggcgagggcg 420 caggacccgg ggagccgcgc agggaggtgg gtcgggcggg tctcagcccc tcctcgcccc 480 caggctccca ctccatgagg tatttcgaca ccgccgtgtc ccggcccggc cgcggagagc 540 cccgcttcat ctcagtgggc tacgtggacg acacgcagtt cgtgcggttc gacagcgacg 600 ccgcgagtcc gagaggggag ccgcgggcgc cgtgggtgga gcaggagggg ccggagtatt 660 gggaccggga gacacagaac tacaagcgcc aggcacaggc tgaccgagtg agcctgcgga 720 acctgcgcgg ctactacaac cagagcgagg acggtgagtg accccggccc ggggcgcagg 780 tcacgacccc tccccatccc ccacggacgg cccgggtcgc cccgagtctc cccgtctgag 840 atccacccca aggtggatct gcggaacccg cccagaccct cgaccggaga gagccccagt 900 cgcctttacc cggtttcatt ttcggtttag gccaaaatcc ccgcgggttg gtcggggcgg 960 ggcggggctc gggggactgg gctgaccgcg ggggcggggc cagggtctca caccctccag 1020 aggatgtatg gctgcgacct ggggcccgac gggcgcctcc tccgcgggta tgaccagtcc 1080 gcctacgacg gcaaggatta catcgccctg aacgaggacc tgcgctcctg gaccgccgcg 1140 gacaccgcgg ctcagatcac ccagcgcaag ttggaggcgg cccgtgcggc ggagcagctg 1200 agagcctacc tggagggcac gtgcgtggag tggctccgca gatacctgga gaacgggaag 1260 gagacgctgc agcgcgcagg taccaggggc agtggggagc cttccccatc tcctatagat 1320 ctcccgggat ggcctcccac gaggagggga ggaaaatggg atcagcactg gaatatcgcc 1380 ctcccttgaa tggagaatgg catgagtttt cctgagtttc ctctgagggc cccctctgct 1440 ctctaggaca attaagggat gaagtctctg aggaaatgga ggggaagaca gtccctggaa 1500 tactgatcag gggtctcctt tgaccacttt gaccactgca gcagctgtgg tcaggctgct 1560 gacctttctc tcaggccttg ttctctgcct cacactcaat gtgtctgaag gtttgattcc 1620 agcttttctg agtcctgcag cctccactca ggtcaggacc agaagtcgct gttcctccct 1680 cagagactag aactttccaa tgaataggag attatcccag gtgcctgtgt ccaggctggc 1740 gtctgggttc tgtgccgcct tccccacccc aggtgtcctg tccattctca ggatggtcac 1800 atgggcgctg ctggagtgtc ccaagagaga tgcaaagtgt ctgaattttc tgactcttcc 1860 cgtcagaacc cccaaagaca cacgtgaccc accaccccct ctctgaccat gaggccaccc 1920 tgaggtgctg ggccctgggc ttctaccctg cggagatcac actgacctgg cagcgggatg 1980 gggaggacca gacccaggac accgagcttg tggagaccag gccagcagga gatggaacct 2040 tccagaagtg ggcagctgtg gtggtgcctt ctggacaaga gcagagatac acgtgccata 2100 tgcagcacga ggggctgcaa gagcccctca ccctgagctg gggtaaggag gggaatgggg 2160 ggtcacatct cttatcagag aaagcagaag tccttctgga gcccttcagc cgggtcaggg 2220 ctgaggcttg ggggtcaggg cccctcacct tctcctcctt tcccagagcc atcttcccag 2280 cccaccatcc ccatcatggg catcgttgct ggcctggctg tcctggttgt cctagctgtc 2340 cttggagctg tggtcaccgc tatgatgtgt aggaggaaga gctcaggtag ggaaggggtg 2400 aagagcgggg tctgggtttt cttgtcccac tgggagtttc aagccccagg tagaagtgtg 2460 ccccgccttg ttactggaag caccatccac acatgggcca tcccagcctg ggaccctgtg 2520 tgccagcact tactcttttg tgaagcacat gtgacaatga aggacggatg tatcaccttg 2580 atgattatgg tgttggggtc ctgattccag cattcatgag tcaggggaag gtccctgcta 2640 aggacagacc ttaggagggc agttggtcca gaacccacaa ctgctttccc catgtttcct 2700 gatcctgccc tgggtctgca gtcgtagttc tggaaacttc tcttgggtcc aagactagga 2760 ggttccccta agatcacatg gccctgcctc ctcccagtcc cctcataggg cattttcttc 2820 ccacaggtgg aaaaggaggg agctgctctc aggctgcgtg taagtgatgg cggcgggcgt 2880 gtggaggagc tcacctactc cataattcct cttgtcccac atctcctgcg ggctctgacc 2940 aggtcttttt ttttgttcta ccccaggcag caacagtgcc cagggctctg atgtgtctct 3000 catcacttgt aaaggtgaga ttctggggag ctgaagtggt cgggggtggg gcagagggaa 3060 aaggcctggg taatggggat tctttgattg ggacgtttcg agtgtgtggt gggccgttca 3120 gagtgtcatc acttaccatg actgacctga atttgttcat gactattgtg ttctgtagcc 3180 tgagacagct gcctgtgtgg gactgagatg caggatttct tcacacctct cctttgtgac 3240 ttcaagagcc tctggcatct ctttctgcaa aggcgtctga atgtgtctgc gttcctgtta 3300 gcataatgtg aggaggtgga gagacagccc acccccgtgt ccaccgtgac ccct 3354 // ID LN877318; SV 2; linear; genomic DNA; STD; HUM; 3315 BP. XX AC LN877318; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-A gene for MHC class I antigen, allele HLA-A*33:01:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3315 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 5f0eec5a96a14efae795c6dda7b686b6. DR IMGT/HLA; HLA-A*33:01:01:01; HLA00104. XX FH Key Location/Qualifiers FH FT source 1..3315 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300114" FT /db_xref="taxon:9606" FT CDS join(301..373,503..772,1014..1289,1890..2165,2265..2381, FT 2822..2854,2997..3044,3214..3218) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-A" FT /allele="HLA-A*33:01:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:C5IWY7" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:C5IWY7" FT /protein_id="CUA55061.1" FT /translation="MAVMAPRTLLLLLLGALALTQTWAGSHSMRYFTTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAHSQIDRVDLGT FT LRGYYNQSEAGSHTIQMMYGCDVGSDGRFLRGYQQDAYDGKDYIALNEDLRSWTAADMA FT AQITQRKWEAARVAEQLRAYLEGTCVEWLRRHLENGKETLQRTDPPRTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWASVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVFAGAVVAAVRWRRKSSDRK FT GGSYSQAASSDSAQGSDMSLTACKV" FT exon <301..373 FT /gene="HLA-A" FT /allele="HLA-A*33:01:01" FT /number=1 FT intron 374..502 FT /gene="HLA-A" FT /allele="HLA-A*33:01:01" FT /number=1 FT exon 503..772 FT /gene="HLA-A" FT /allele="HLA-A*33:01:01" FT /number=2 FT intron 773..1013 FT /gene="HLA-A" FT /allele="HLA-A*33:01:01" FT /number=2 FT exon 1014..1289 FT /gene="HLA-A" FT /allele="HLA-A*33:01:01" FT /number=3 FT intron 1290..1889 FT /gene="HLA-A" FT /allele="HLA-A*33:01:01" FT /number=3 FT exon 1890..2165 FT /gene="HLA-A" FT /allele="HLA-A*33:01:01" FT /number=4 FT intron 2166..2264 FT /gene="HLA-A" FT /allele="HLA-A*33:01:01" FT /number=4 FT exon 2265..2381 FT /gene="HLA-A" FT /allele="HLA-A*33:01:01" FT /number=5 FT intron 2382..2821 FT /gene="HLA-A" FT /allele="HLA-A*33:01:01" FT /number=5 FT exon 2822..2854 FT /gene="HLA-A" FT /allele="HLA-A*33:01:01" FT /number=6 FT intron 2855..2996 FT /gene="HLA-A" FT /allele="HLA-A*33:01:01" FT /number=6 FT exon 2997..3044 FT /gene="HLA-A" FT /allele="HLA-A*33:01:01" FT /number=7 FT intron 3045..3213 FT /gene="HLA-A" FT /allele="HLA-A*33:01:01" FT /number=7 FT exon 3214..>3218 FT /gene="HLA-A" FT /allele="HLA-A*33:01:01" FT /number=8 XX SQ Sequence 3315 BP; 634 A; 954 C; 1019 G; 708 T; 0 other; caggagcaga ggggtcaggg cgaagtacca gggccccagg cgtggctctc agggtctcag 60 gccccgaagg cggtgtatgg attggggagt cccagccttg gggattcccc aactccgcag 120 tttcttttct ccctctccca acctatgtag ggtccttctt cctggatact cacgacgcgg 180 acccagttct cactcccatt gggtgtcggg tttccagaga agccaatcag tgtcgtcgcg 240 gtcgcggttc taaagtccgc acgcacccac cgggactcag attctcccca gacgccgagg 300 atggccgtca tggcgccccg aaccctcctc ctgctactct tgggggccct ggccctgacc 360 cagacctggg cgggtgagtg cggggtcgtg gggaaaccgc ctctgcgggg agaagcaagg 420 ggcccgcccg gcgggggcgc aggacccggg tagccgcgcc gggaggaggg tcgggcggat 480 ctcagccact cctcgccccc aggctcccac tccatgaggt atttcaccac atccgtgtcc 540 cggcccggcc gcggggagcc ccgcttcatc gccgtgggct acgtggacga cacgcagttc 600 gtgcggttcg acagcgacgc cgcgagccag aggatggagc cgcgggcgcc gtggatagag 660 caggaggggc cggagtattg ggaccggaac acacggaatg tgaaggccca ctcacagatt 720 gaccgagtgg acctggggac cctgcgcggc tactacaacc agagcgaggc cggtgagtga 780 ccccagcccg gggcgcaggt cacgacctct catcccccac ggacgggcca ggtcacccac 840 agtctccggg tccgagatcc accccgaagc cgcgggaccc cgagaccctt gccccgggag 900 aggcccaggc gcctttaccc ggtttcattt tcagtttagg ccaaaaatcc ccccgggttg 960 gtcggggccg gacggggctc gggggactgg gctgaccgtg gggtcggggc caggttctca 1020 caccatccag atgatgtatg gctgcgacgt ggggtcggac gggcgcttcc tccgcgggta 1080 ccagcaggac gcctacgacg gcaaggatta catcgccttg aacgaggacc tgcgctcttg 1140 gaccgcggcg gacatggcgg ctcagatcac ccagcgcaag tgggaggcgg cccgtgtggc 1200 ggagcagttg agagcctacc tggagggcac gtgcgtggag tggctccgca gacacctgga 1260 gaacgggaag gagacgctgc agcgcacggg taccaggggc cacggggcgc ctccctgatc 1320 gcctgtagat ctcccgggct ggcctcccac aaggagggga gacaattggg accaacacta 1380 gaatatcacc ctccctctgg tcctgaggga gaggaatcct cctgggtttc cagatcctgt 1440 accagagagt gactctgagg ttccgccctg ctctgtgaca caattaaggg ataaaatctc 1500 tgaaggaatg acgggaagac gatccctcga atactgatga gtggttccct ttgacacaca 1560 ccggcagcag ccttgggccc gtgacttttc ctctcaggcc ttgttctctg cttcacactc 1620 aatgtgtgtg ggggtctgag tccagcactt ctgagtccct cagcctccac tcaggtcagg 1680 accagaagtc gctgttccct cttcagggac tagaattttc cacggaatag gagattatcc 1740 caggtgcctg tgtccaggct ggtgtctggg ttctgtgctc ccttccccat cccaggtgtc 1800 ctgtccattc tcaagatagc cacatgtgtg ctggaggagt gtcccattac agatgcaaaa 1860 tgcctgaatg ttctgactct tcctgacaga cccccccagg acgcatatga ctcaccacgc 1920 tgtctctgac catgaggcca ccctgaggtg ctgggccctg agcttctacc ctgcggagat 1980 cacactgacc tggcagcggg atggggagga ccagacccag gacacggagc tcgtggagac 2040 caggcctgca ggggatggaa ccttccagaa gtgggcgtct gtggtggtgc cttctggaca 2100 ggagcagaga tacacctgcc atgtgcagca tgagggtctc cccaagcccc tcaccctgag 2160 atggggtaag gagggagatg ggggtgtcat gtcttttagg gaaagcagga gcctctctga 2220 cctttagcag ggtcagggcc cctcaccttc ccctcttttc ccagagccgt cttcccagcc 2280 caccatcccc atcgtgggca tcattgctgg cctagttctc tttggagctg tgttcgctgg 2340 agctgtggtc gctgctgtga ggtggaggag gaagagctca ggtggggtga aggggtgaag 2400 ggtgggtctg agatttcttg tctcactgag ggttccaaga cccaggtaga agtgtgccct 2460 gcctcgttac tgggaagcac catccacaat tatgggccta cccagcctgg gccctgtgtg 2520 ccagcactta ctcttttgta aagcacctgt taaaatgaag gacagattta tcaccttgat 2580 tatggcggtg atgggacctg atcccagcag tcacaagtca caggggaagg tccctgagga 2640 ccttcaggag ggcggttggt ccaggaccca cacctgcttt cttcatgttt cctgatcccg 2700 ccctgggtct gcagtcacac atttctggaa acttctctga ggtccaagac ttggaggttc 2760 ctctaggacc ttaaggccct ggctcctttc tggtatctca caggacattt tcttcccaca 2820 gatagaaaag gagggagcta ctctcaggct gcaagtaagt atgaaggagg atgatccaag 2880 aaatcactgg gatattgtgt ttgggagccc gtgggggagc tcacccaccc cacaattcct 2940 cctctagcca catcttctgt gggatctgac caggttctgt ttttgtccta ccccaggcag 3000 tgacagtgcc cagggctctg atatgtctct cacagcttgt aaaggtgaga gcctggaggg 3060 cctgatgtgt gttgggtgtt gggcggaaca gtggacgcag ctgtgctatg gggtttcttt 3120 gcattggatg tattgagcat gcgatgggct gtttaaagtg tgactcctca ctgtgacaga 3180 tacgaatttg ttcatgaata tttttttcta tagtgtgaga cagctgcctt gtgtgggact 3240 gagaggcaag atttgttcct gcccttccct ttgtgacttg aagtaccctg actttgtttc 3300 tgcaaaggca cctgc 3315 // ID LN877319; SV 2; linear; genomic DNA; STD; HUM; 3327 BP. XX AC LN877319; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*53:01:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3327 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 0e08f9e5e5ee052f077c388fe43ed672. DR IMGT/HLA; HLA-B*53:01:01:01; HLA00364. XX FH Key Location/Qualifiers FH FT source 1..3327 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300114" FT /db_xref="taxon:9606" FT CDS join(285..357,487..756,1002..1277,1853..2128,2233..2349, FT 2791..2823,2930..2973) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*53:01:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:S6BVK3" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:S6BVK3" FT /protein_id="CUA55062.1" FT /translation="MRVTAPRTVLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRENLRI FT ALRYYNQSEAGSHIIQRMYGCDLGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*53:01:01" FT /number=1 FT intron 358..486 FT /gene="HLA-B" FT /allele="HLA-B*53:01:01" FT /number=1 FT exon 487..756 FT /gene="HLA-B" FT /allele="HLA-B*53:01:01" FT /number=2 FT intron 757..1001 FT /gene="HLA-B" FT /allele="HLA-B*53:01:01" FT /number=2 FT exon 1002..1277 FT /gene="HLA-B" FT /allele="HLA-B*53:01:01" FT /number=3 FT intron 1278..1852 FT /gene="HLA-B" FT /allele="HLA-B*53:01:01" FT /number=3 FT exon 1853..2128 FT /gene="HLA-B" FT /allele="HLA-B*53:01:01" FT /number=4 FT intron 2129..2232 FT /gene="HLA-B" FT /allele="HLA-B*53:01:01" FT /number=4 FT exon 2233..2349 FT /gene="HLA-B" FT /allele="HLA-B*53:01:01" FT /number=5 FT intron 2350..2790 FT /gene="HLA-B" FT /allele="HLA-B*53:01:01" FT /number=5 FT exon 2791..2823 FT /gene="HLA-B" FT /allele="HLA-B*53:01:01" FT /number=6 FT intron 2824..2929 FT /gene="HLA-B" FT /allele="HLA-B*53:01:01" FT /number=6 FT exon 2930..>2973 FT /gene="HLA-B" FT /allele="HLA-B*53:01:01" FT /number=7 XX SQ Sequence 3327 BP; 618 A; 971 C; 1041 G; 697 T; 0 other; gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagagcct 60 tgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcggatatct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccgt cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggccggtg 360 agtgcggggt cgggagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg 420 gcgcaggacc tgaggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg 540 agccccgctt catcgcagtg ggctacgtgg acgacaccca gttcgtgagg ttcgacagcg 600 acgccgcgag tccgaggacg gagccccggg cgccatggat agagcaggag gggccggagt 660 attgggaccg gaacacacag atcttcaaga ccaacacaca gacttaccga gagaacctgc 720 ggatcgcgct ccgctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgcctcc ctgaggccgc gggacccgcc cagaccctcg accggcgaga gccccaggcg 900 cgtttacccg gtttcatttt cagttgaggc caaaatcccc gcgggttggt cggggcgggg 960 cggggctcgg gggacggggc tgaccgcggg gccggggcca gggtctcaca tcatccagag 1020 gatgtatggc tgcgacctgg ggcccgacgg gcgcctcctc cgcgggcatg accagtccgc 1080 ctacgacggc aaggattaca tcgccctgaa cgaggacctg agctcctgga ccgcggcgga 1140 caccgcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcagctgag 1200 agcctacctg gagggcctgt gcgtggagtg gctccgcaga tacctggaga acgggaagga 1260 gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320 ccggggatgg cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct 1380 cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440 ctaggacaat taagggatga cgtctctgag gaaatggagg ggaagacagt ccctagaata 1500 ctgatcaggg gtcccctttg acccctgcag cagccttggg aaccgtgact tttcctctca 1560 ggccttgttc tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt 1620 cactttacct ccactcagat caggagcaga agtccctgtt ccccgctcag agactcgaac 1680 tttccaatga ataggagatt atcccaggtg cctgcgtcca ggctggtgtc tgggttctgt 1740 gccccttccc cacaccaggt gtcctgtcca ttctcaggct ggtcacatgg gtggtcctag 1800 ggtgtcccat gagagatgca aagcgcctga attttctgac tcttcccatc agacccccca 1860 aagacacacg tgacccacca ccccgtctct gaccatgagg ccaccctgag gtgctgggcc 1920 ctgggcttct accctgcgga gatcacactg acctggcagc gggatggcga ggaccaaact 1980 caggacactg agcttgtgga gaccagacca gcaggagata gaaccttcca gaagtgggca 2040 gctgtggtgg tgccttctgg agaagagcag agatacacat gccatgtaca gcatgagggg 2100 ctgccgaagc ccctcaccct gagatggggt aaggaggggg atgaggggtc atatctcttc 2160 tcagggaaag caggagccct tctggagccc ttcagcaggg tcagggcccc tcgtcttccc 2220 ctcctttccc agagccatct tcccagtcca ccatccccat cgtgggcatt gttgctggcc 2280 tggctgtcct agcagttgtg gtcatcggag ctgtggtcgc tactgtgatg tgtaggagga 2340 agagctcagg tagggaaggg gtgaggggtg gggtctgggt tttcttgtcc cactgggggt 2400 ttcaagcccc aggtagaagt gttccctgcc tcattactgg gaagcagcat ccacacaggg 2460 gctaacgcag cctgggaccc tgtgtgccag cacttactct tttgtgcagc acatgtgaca 2520 atgaaggacg gatgtatcac cttgatggtt gtggtgttgg ggtcctgatt tcagcattca 2580 tgagtcaggg gaaggtccct gctaaggaca gaccttagga gggcagttgg tccaggaccc 2640 acacttgctt tcctcgtgtt tcctgatcct gccttgggtc tgtagtcata cttctggaaa 2700 ttccttttgg gtccaagacg aggaggttcc tctaagatct catggccctg cttcctccca 2760 gtcccctcac aggacatttt cttcccacag gtggaaaagg agggagctac tctcaggctg 2820 cgtgtaagtg gtgggggtgg gagtgtggag gagctcaccc accccataat tcctcctgtc 2880 ccacgtctcc tgcgggctct gaccaggtcc tgtttttgtt ctactccagc cagcgacagt 2940 gcccagggct ctgatgtgtc tctcacagct tgaaaaggtg agattcttgg ggtctagagt 3000 gggcgggggg ggcggggagg gggcagaggg gaaaggcctg ggtaatggag attctttgat 3060 tgggatgttt cgcgtgtgtc gtgggctgtt cagagtgtca tcacttacca tgactaacca 3120 gaatttgttc atgactgttg ttttctgtag cctgagacag ctgtcttgtg agggactgag 3180 atgcaggatt tcttcactcc tcccctttgt gacttcaaga gcctctggca tctctttctg 3240 caaaggcacc tgaatgtgtc tgcgtccctg ttagcctaat gtgaggaggt ggagagacag 3300 cccacccttg tgtccactgt gacccct 3327 // ID LN877320; SV 2; linear; genomic DNA; STD; HUM; 3349 BP. XX AC LN877320; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*05:98 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3349 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 659da03454939f1c34a9e780f32788ed. DR IMGT/HLA; HLA-C*05:98; HLA10437. XX FH Key Location/Qualifiers FH FT source 1..3349 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300115" FT /db_xref="taxon:9606" FT CDS join(284..356,487..756,1003..1278,1866..2141,2263..2382, FT 2822..2854,2962..3009,3174..3178) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*05:98" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A0S4T3G2" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A0S4T3G2" FT /protein_id="CUA55063.1" FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMRYFYTAVSRPGRGEPR FT FISVGYVDDTQFVQFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVNLRK FT LRGYYNQSEAGSHTLQRMYGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADKA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKKTLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWGPSSQPTIPIVGIVAGLAVLAVLAVLGAVMAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT exon <284..356 FT /gene="HLA-C" FT /allele="HLA-C*05:98" FT /number=1 FT intron 357..486 FT /gene="HLA-C" FT /allele="HLA-C*05:98" FT /number=1 FT exon 487..756 FT /gene="HLA-C" FT /allele="HLA-C*05:98" FT /number=2 FT intron 757..1002 FT /gene="HLA-C" FT /allele="HLA-C*05:98" FT /number=2 FT exon 1003..1278 FT /gene="HLA-C" FT /allele="HLA-C*05:98" FT /number=3 FT intron 1279..1865 FT /gene="HLA-C" FT /allele="HLA-C*05:98" FT /number=3 FT exon 1866..2141 FT /gene="HLA-C" FT /allele="HLA-C*05:98" FT /number=4 FT intron 2142..2262 FT /gene="HLA-C" FT /allele="HLA-C*05:98" FT /number=4 FT exon 2263..2382 FT /gene="HLA-C" FT /allele="HLA-C*05:98" FT /number=5 FT intron 2383..2821 FT /gene="HLA-C" FT /allele="HLA-C*05:98" FT /number=5 FT exon 2822..2854 FT /gene="HLA-C" FT /allele="HLA-C*05:98" FT /number=6 FT intron 2855..2961 FT /gene="HLA-C" FT /allele="HLA-C*05:98" FT /number=6 FT exon 2962..3009 FT /gene="HLA-C" FT /allele="HLA-C*05:98" FT /number=7 FT intron 3010..3173 FT /gene="HLA-C" FT /allele="HLA-C*05:98" FT /number=7 FT exon 3174..>3178 FT /gene="HLA-C" FT /allele="HLA-C*05:98" FT /number=8 XX SQ Sequence 3349 BP; 629 A; 979 C; 1040 G; 701 T; 0 other; gatcaggacg aagtcccagg tcccgggcgg ggctctcagg gtctcaggct ccaagggccg 60 tgtctgcact ggggaggcgc cgcgttgagg attctccact cccctgagtt tcacttcttc 120 ttccaacctg cgtcgggtcc ttcttcctga atactcatga cgcgtcccca attcccactc 180 ccattgggtg tcgggttcta gagaagccaa tcagcgtctc cgcagtcccg gttctaaagt 240 ccccagtcac ccacccggac tcggattctc cccagacgcc gagatgcggg tcatggcgcc 300 ccgaaccctc atcctgctgc tctcgggagc cctggccctg accgagacct gggcctgtga 360 gtgcgaggtt gggagggaaa cggcctctgc ggagaggagc gaggggcccg cccggcgagg 420 gcgcaggacc cggggagccg cgcagggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccgt gtcccggccc ggccgcggag 540 agccccgctt catctcagtg ggctacgtgg acgacacgca gttcgtgcag ttcgacagcg 600 acgccgcgag tccaagaggg gagccgcggg cgccgtgggt ggagcaggag gggccggagt 660 attgggaccg ggagacacag aagtacaagc gccaggcaca gactgaccga gtgaacctgc 720 ggaaactgcg cggctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac ccctccccat cccccacgga cggcccgggt cgccccgagt ctcccggtct 840 gagatccacc ccgaggctgc ggaacccgcc cagaccctcg accggagaga gccccagtca 900 cctttacccg gtttcatttt cagtttaggc caaaatcccc gcgggttggt cggggctggg 960 gcggggctcg ggggacgggg ctgaccacgg gggcggggcc agggtctcac accctccaga 1020 ggatgtatgg ctgcgacctg gggcccgacg ggcgcctcct ccgcgggtat aaccagttcg 1080 cctacgacgg caaggattac atcgccctga atgaggacct gcgctcctgg accgccgcgg 1140 acaaggcggc tcagatcacc cagcgcaagt gggaggcggc ccgtgaggcg gagcagcgga 1200 gagcctacct ggagggcacg tgcgtggagt ggctccgcag atacctggag aacgggaaga 1260 agacgctgca gcgcgcgggt accaggggca gtggggagcc ttccccatct cctgtagatc 1320 tcccgggatg gcctcccacg aggaggggag gaaaatggga tcagcgctgg aatatcgccc 1380 tcccttgaat ggagaatggg atgagttttc ctgagtttct tctgagggcc ccctctgctc 1440 tctaggacaa ttaagggatg aagtccttga ggaaatggag gggaagacag tccctggaat 1500 actgatcagg ggtccccttt gaccactttg accactgcag cagctgtggt caggctgctg 1560 acctttctct caggccttgt tctctgcctc acgctcaatg tgtttaaagg tttgattcca 1620 gcttttctga gtccttcggc ctccactcag gtcaggacca gaagtcgctg ttcctccctc 1680 agagactaga actttccaat gaataggaga ttatcccagg tgcctgtgtc caggctggcg 1740 tctgggttct gtgccccctt ccccacccca ggtgtcctgt ccattctcag gatggtcaca 1800 tgggcactgt tggagtgtcg caagagagat acaaagtgtc tgaattttct gactcttccc 1860 gtcagaacac ccaaagacac acgtgaccca ccatcccgtc tctgaccatg aggccaccct 1920 gaggtgctgg gccctgggct tctaccctgc ggagatcaca ctgacctggc agcgggatgg 1980 cgaggaccaa actcaggaca ccgagcttgt ggagaccagg ccagcaggag atggaacctt 2040 ccagaagtgg gcagctgtgg tggtgccttc tggagaagag cagagataca cgtgccatgt 2100 gcagcacgag gggctgccag agcccctcac cctgagatgg ggtaaggagg gggatgaggg 2160 gtcatgtgtc ttctcaggga aagcagaagt cctggagccc ttcagccggg tcagggctga 2220 ggcttggggg tcagggcccc tcaccttccc ctcctttccc agggccatct tcccagccca 2280 ccatccccat cgtgggcatc gttgctggcc tggctgtcct ggctgtccta gctgtcctag 2340 gagctgtgat ggctgttgtg atgtgtagga ggaagagctc aggtagggaa ggggtgagga 2400 gtggggtctg ggttttcttg tcccactggg agtttcaagc cccaggtaga agtgtgcccc 2460 acctcgttac tggaagcacc atccacacat gggccatccc agcctgggac cctgtgtgct 2520 agcacttact ctgttgtgaa gcacatgaca atgaaggaca gatgtatcac cttgatgatt 2580 atggtgttgg ggtccttgat tccagcattc atgagtcagg ggaaggtccc tgctaaggac 2640 agaccttagg agggcagttg ctccagaacc cacagctgct ttccccgtgt ttcctgatcc 2700 tgccctgggt ctgcagtcat agttctggaa acttctcttg ggtccaagac taggaggttc 2760 ccctaagatc gcatggccct gcctcctccc tgtcccctca cagggcattt tcttcccaca 2820 ggtggaaaag gagggagctg ctctcaggct gcgtgtaagt gatggcggtg ggcgtgtgga 2880 ggagctcacc caccccataa ttcctcttgt cccacatctc ctgcgggctc tgaccaggtc 2940 tttttttttg ttctacccca gccagcaaca gtgcccaggg ctctgatgag tctctcatcg 3000 cttgtaaagg tgagattctg gggagctgaa gtggtcgggg gtggggcaga gggaaaaggc 3060 ctaggtaatg gggatccttt gattgggacg tttcgaatgt gtggtgagct gttcagagtg 3120 tcatcactta ccatgactga cctgaatttg ttcatgacta ttgtgttctg tagcctgaga 3180 cagctgcctg tgtgggactg agatgcagga tttcttcaca cctttccttt gtgacttcaa 3240 gagcctctgg catctctttc tgcaaaggca tctgaatgtg tctgcgttcc tgttagcata 3300 atgtgaggag gtggagagac agcccacccc cgtgtccacc gtgacccct 3349 // ID LN877321; SV 2; linear; genomic DNA; STD; HUM; 3315 BP. XX AC LN877321; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-A gene for MHC class I antigen, allele HLA-A*29:02new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3315 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 6d62c1e2857ecb17168f2b2763b9ea9c. DR Ensembl-Gn; ENSG00000231834; homo_sapiens. DR Ensembl-Tr; ENST00000550728; homo_sapiens. DR IMGT/HLA; HLA-A*29:02:01:03; HLA14084. XX FH Key Location/Qualifiers FH FT source 1..3315 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300116" FT /db_xref="taxon:9606" FT CDS join(301..373,503..772,1014..1289,1890..2165,2265..2381, FT 2822..2854,2997..3044,3214..3218) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-A" FT /allele="HLA-A*29:02new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:B0UXQ0" FT /db_xref="HGNC:HGNC:4931" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:B0UXQ0" FT /protein_id="CUA55064.1" FT /translation="MAVMAPRTLLLLLLGALALTQTWAGSHSMRYFTTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDLQTRNVKAQSQTDRANLGT FT LRGYYNQSEAGSHTIQMMYGCDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMA FT AQITQRKWEAARVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWASVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVFAGAVVAAVRWRRKSSDRK FT GGSYSQAASSDSAQGSDMSLTACKV" FT exon <301..373 FT /gene="HLA-A" FT /allele="HLA-A*29:02new" FT /number=1 FT intron 374..502 FT /gene="HLA-A" FT /allele="HLA-A*29:02new" FT /number=1 FT exon 503..772 FT /gene="HLA-A" FT /allele="HLA-A*29:02new" FT /number=2 FT intron 773..1013 FT /gene="HLA-A" FT /allele="HLA-A*29:02new" FT /number=2 FT exon 1014..1289 FT /gene="HLA-A" FT /allele="HLA-A*29:02new" FT /number=3 FT intron 1290..1889 FT /gene="HLA-A" FT /allele="HLA-A*29:02new" FT /number=3 FT exon 1890..2165 FT /gene="HLA-A" FT /allele="HLA-A*29:02new" FT /number=4 FT intron 2166..2264 FT /gene="HLA-A" FT /allele="HLA-A*29:02new" FT /number=4 FT exon 2265..2381 FT /gene="HLA-A" FT /allele="HLA-A*29:02new" FT /number=5 FT intron 2382..2821 FT /gene="HLA-A" FT /allele="HLA-A*29:02new" FT /number=5 FT exon 2822..2854 FT /gene="HLA-A" FT /allele="HLA-A*29:02new" FT /number=6 FT intron 2855..2996 FT /gene="HLA-A" FT /allele="HLA-A*29:02new" FT /number=6 FT exon 2997..3044 FT /gene="HLA-A" FT /allele="HLA-A*29:02new" FT /number=7 FT intron 3045..3213 FT /gene="HLA-A" FT /allele="HLA-A*29:02new" FT /number=7 FT exon 3214..>3218 FT /gene="HLA-A" FT /allele="HLA-A*29:02new" FT /number=8 XX SQ Sequence 3315 BP; 626 A; 953 C; 1027 G; 709 T; 0 other; caggagcaga ggggtcaggg cgaagtccca gggccccagg cgtggctctc agggtctcag 60 gccccgaagg cggtgtatgg attggggagt cccagccttg gggattcccc aactccgcag 120 tttcttttct ccctctgcca acctatgtag ggtccttctt cctggatact cacgacgcgg 180 acccagttct cactcccatt gggtgtcggg tttccagaga agccaatcag tgtcgtcgcg 240 gtcgcggttc taaagtccgc acgcacccac cgggactcag attctcccca gacgccgagg 300 atggccgtca tggcgccccg aaccctcctc ctgctactct tgggggccct ggccctgacc 360 cagacctggg cgggtgagtg cggggtcgtg gggaaaccgc ctctgcgggg agaagcaagg 420 ggcccgcccg gcggggacgc aggacccggg tagccgcgcc gggaggaggg tcgggcggat 480 ctcagccact cctcgccccc aggctcccac tccatgaggt atttcaccac atccgtgtcc 540 cggcccggcc gcggggagcc ccgcttcatc gccgtgggct acgtggacga cacgcagttc 600 gtgcggtttg acagcgacgc cgcgagccag aggatggagc cgcgggcacc gtggatagag 660 caggaggggc cggagtattg ggacctgcag acacggaatg tgaaggccca gtcacagact 720 gaccgagcga acctggggac cctgcgcggc tactacaacc agagcgaggc cggtgagtga 780 ccccggcccg gggcgcaggt cacgacctct catcccccac ggacgggccg ggtcgcccac 840 agtctccggg tccgagatcc accccgaagc cgcgggaccc cgagaccctt gccccgggag 900 aggcccaggc gcctttaccc ggtttcattt tcagtttagg ccaaaaatcc ccccgggttg 960 gtcggggccg gacggggctc gggggactgg gctgaccgtg gggtcggggc caggttctca 1020 caccatccag atgatgtatg gctgcgacgt ggggtcggac gggcgcttcc tccgcgggta 1080 ccggcaggac gcctacgacg gcaaggatta catcgccttg aacgaggacc tgcgctcttg 1140 gaccgcggcg gacatggcgg ctcagatcac ccagcgcaag tgggaggcgg cccgtgtggc 1200 ggagcagttg agagcctacc tggagggcac gtgcgtggag tggctccgca gatacctgga 1260 gaacgggaag gagacgctgc agcgcacggg taccgggggc cacggggcgc ctccctgatc 1320 gcctgtagat ctcccgggct ggcctcccac aaggagggga gacaattggg accaacacta 1380 gaatatcgcc ctccctctgg tcctgaggga gaggaatcct cctgggtttc cagatcctgt 1440 accagagagt gactctgagg ttccgccctg ctctctgaca caattaaggg ataaaatctc 1500 tgaaggaatg acgggaagac gatccctcga atactgatga gtggttccct ttgacacaca 1560 ccggcagcag ccttgggccc gtgacttttc ctctcaggcc ttgttctctg cttcacactc 1620 aatgtgtgtg ggggtctgag tccagcactt ctgagtccct cagcctccac tcaggtcagg 1680 accagaagtc gctgttccct cttcagggac tagaattttc cacggaatag gagattatcc 1740 caggtgcctg tgtccaggct ggtgtctggg ttctgtgctc ccttccccat cccaggtgtc 1800 ctgtccattc tcaagatagc cacatgtgtg ctggaggagt gtcccatgac agatgcaaaa 1860 tgcctgaatg ttctgactct tcctgacaga cgcccccaag acgcatatga ctcaccacgc 1920 tgtctctgac catgaggcca ccctgaggtg ctgggccctg agcttctacc ctgcggagat 1980 cacactgacc tggcagcggg atggggagga ccagacccag gacacggagc ttgtggagac 2040 caggcctgca ggggatggaa ccttccagaa gtgggcgtct gtggtggtgc cttctggaca 2100 ggagcagaga tacacctgcc atgtgcagca tgagggtctg cccaagcccc tcaccctgag 2160 atggggtaag gagggagatg ggggtgtcat gtcttttagg gaaagcagga gcctctctga 2220 cctttagcag ggtcagggcc cctcaccttc ccctcttttc ccagagccgt cttcccagcc 2280 caccatcccc atcgtgggca tcattgctgg cctagttctc tttggagctg tgttcgctgg 2340 agctgtggtc gctgctgtga ggtggaggag gaagagctca ggtggggtga agggatgaag 2400 ggtgggtctg agatttcttg tctcactgag ggttccaaga cccaggtaga agtgtgccct 2460 gcctcgttac tgggaagcac catccacaat tatgggccta cccagcctgg gccctgtgtg 2520 ccagcactta ctcttttgta aagcacctgt taaaatgaag gacagattta tcaccttgat 2580 tacggcggtg atgggacctg atcccagcag tcacaagtca caggggaagg tccctgagga 2640 ccttcaggag ggcggttggt ccaggaccca cacctgcttt cttcatgttt cctgatcccg 2700 ccctgggtct gcagtcacac atttctggaa acttctctga ggtccaagac ttggaggttc 2760 ctctaggacc ttaaggccct ggctcctttc tggtatctca caggacattt tcttcccaca 2820 gatagaaaag gagggagcta ctctcaggct gcaagtaagt atgaaggagg ctgatgcctg 2880 aggtccttgg gatattgtgt ttgggagccc gtgggggagc tcacccaccc cacaattcct 2940 cctctagcca catcttctgt gggatctgac caggttctgt ttttgtccta ccccaggcag 3000 tgacagtgcc cagggctctg atatgtctct cacagcttgt aaaggtgaga gcctggaggg 3060 cctgatgtgt gttgggtgtt gggcggaaca gtggacgcag ctgtgctatg gggtttcttt 3120 gcattggatg tattgagcat gcgatgggct gtttaaagtg tgactcctca ctgtgacaga 3180 tacgaatttg ttcatgaata tttttttcta tagtgtgaga cagctgcctt gtgtgggact 3240 gagaggcaag atttgttcct gcccttccct ttgtgacttg aagaaccctg actttgtttc 3300 tgcaaaggca cctgc 3315 // ID LN877322; SV 2; linear; genomic DNA; STD; HUM; 3299 BP. XX AC LN877322; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-A gene for MHC class I antigen, allele HLA-A*03:01new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3299 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; b384fc9d990f8c7245dcfe8b1f7c91fd. DR Ensembl-Gn; ENSG00000206503; homo_sapiens. DR Ensembl-Tr; ENST00000376809; homo_sapiens. DR Ensembl-Tr; ENST00000396634; homo_sapiens. DR IMGT/HLA; HLA-A*03:01:01:05; HLA13785. XX FH Key Location/Qualifiers FH FT source 1..3299 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300116" FT /db_xref="taxon:9606" FT CDS join(301..373,504..773,1015..1290,1869..2144,2247..2363, FT 2806..2838,2981..3028,3198..3202) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-A" FT /allele="HLA-A*03:01new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:B1PKY1" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:B1PKY1" FT /protein_id="CUA55065.1" FT /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGT FT LRGYYNQSEAGSHTIQIMYGCDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMA FT AQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRK FT GGSYTQAASSDSAQGSDVSLTACKV" FT exon <301..373 FT /gene="HLA-A" FT /allele="HLA-A*03:01new" FT /number=1 FT intron 374..503 FT /gene="HLA-A" FT /allele="HLA-A*03:01new" FT /number=1 FT exon 504..773 FT /gene="HLA-A" FT /allele="HLA-A*03:01new" FT /number=2 FT intron 774..1014 FT /gene="HLA-A" FT /allele="HLA-A*03:01new" FT /number=2 FT exon 1015..1290 FT /gene="HLA-A" FT /allele="HLA-A*03:01new" FT /number=3 FT intron 1291..1868 FT /gene="HLA-A" FT /allele="HLA-A*03:01new" FT /number=3 FT exon 1869..2144 FT /gene="HLA-A" FT /allele="HLA-A*03:01new" FT /number=4 FT intron 2145..2246 FT /gene="HLA-A" FT /allele="HLA-A*03:01new" FT /number=4 FT exon 2247..2363 FT /gene="HLA-A" FT /allele="HLA-A*03:01new" FT /number=5 FT intron 2364..2805 FT /gene="HLA-A" FT /allele="HLA-A*03:01new" FT /number=5 FT exon 2806..2838 FT /gene="HLA-A" FT /allele="HLA-A*03:01new" FT /number=6 FT intron 2839..2980 FT /gene="HLA-A" FT /allele="HLA-A*03:01new" FT /number=6 FT exon 2981..3028 FT /gene="HLA-A" FT /allele="HLA-A*03:01new" FT /number=7 FT intron 3029..3197 FT /gene="HLA-A" FT /allele="HLA-A*03:01new" FT /number=7 FT exon 3198..>3202 FT /gene="HLA-A" FT /allele="HLA-A*03:01new" FT /number=8 XX SQ Sequence 3299 BP; 629 A; 950 C; 1023 G; 697 T; 0 other; caggagcaga ggggtcaggg cgaagtccca gggccccagg cgtggctctc agagtctcag 60 gccccgaagg cggtgtatgg attggggagt cccagccttg gggattcccc aactccgcag 120 tttcttttct ccctctccca acctacgtag ggtccttcat cctggatact cacgacgcgg 180 acccagttct cactcccatt gggtgtcggg tttccagaga agccaatcag tgtcgtcgcg 240 gtcgctgttc taaagcccgc acgcacccac cgggactcag attctcccca gacgccgagg 300 atggccgtca tggcgccccg aaccctcctc ctgctactct cgggggccct ggccctgacc 360 cagacctggg cgggtgagtg cggggtcggg agggaaaccg cctctgcggg gagaagcaag 420 gggccctcct ggcgggggcg caggaccggg ggagccgcgc cgggacgagg gtcgggcagg 480 tctcagccac tgctcgcccc caggctccca ctccatgagg tatttcttca catccgtgtc 540 ccggcccggc cgcggggagc cccgcttcat cgccgtgggc tacgtggacg acacgcagtt 600 cgtgcggttc gacagcgacg ccgcgagcca gaggatggag ccgcgggcgc cgtggataga 660 gcaggagggg ccggagtatt gggaccagga gacacggaat gtgaaggccc agtcacagac 720 tgaccgagtg gacctgggga ccctgcgcgg ctactacaac cagagcgagg ccggtgagtg 780 accccggccg ggggcgcagg tcaggacccc tcatccccca cggacgggcc aggtcgccca 840 cagtctccgg gtccgagatc caccccgaag ccgcgggacc ccgagaccct tgccccggga 900 gaggcccagg cgcctttacc cggtttcatt ttcagtttag gccaaaaatc cccccgggtt 960 ggtcggggct gggcggggct cgggggactg ggctgaccgc ggggtcgggg ccaggttctc 1020 acaccatcca gataatgtat ggctgcgacg tggggtcgga cgggcgcttc ctccgcgggt 1080 accggcagga cgcctacgac ggcaaggatt acatcgccct gaacgaggac ctgcgctctt 1140 ggaccgcggc ggacatggcg gctcagatca ccaagcgcaa gtgggaggcg gcccatgagg 1200 cggagcagtt gagagcctac ctggatggca cgtgcgtgga gtggctccgc agatacctgg 1260 agaacgggaa ggagacgctg cagcgcacgg gtaccagggg ccacggggcg cctccctgat 1320 cgcctgtaga tctcccgggc tggcctccca caaggagggg agacaattgg gaccaacact 1380 agaatatcac cctccctctg gtcctgaggg agaggaatcc tcctgggttc cagatcctgt 1440 accagagagt gactctgagg ttccgccctg ctctctgaca caattaaggg ataaaatctc 1500 tgaaggagtg acgggaagac gatccctcga atactgatga gtggttccct ttgacaccgg 1560 cagcagcctt gggcccgtga cttttcctct caggccttgt tctctgcttc acactcaatg 1620 tgtgtggggg tctgagtcca gcacttctga gtccctcagc ctccactcag gtcaggacca 1680 gaagtcgctg ttcccttctc agggaataga agattatccc aggtgcctgt gtccaggctg 1740 gtgtctgggt tctgtgctct cttccccatc ccgggtgtcc tgtccattct caagatggcc 1800 acatgcgtgc tggtggagtg tcccatgaca gatgcaaaat gcctgaattt tctgactctt 1860 cccgtcagac ccccccaaga cacatatgac ccaccacccc atctctgacc atgaggccac 1920 cctgaggtgc tgggccctgg gcttctaccc tgcggagatc acactgacct ggcagcggga 1980 tggggaggac cagacccagg acacggagct cgtggagacc aggcctgcag gggatggaac 2040 cttccagaag tgggcggctg tggtggtgcc ttctggagag gagcagagat acacctgcca 2100 tgtgcagcat gagggtctgc ccaagcccct caccctgaga tggggtaagg agggagatgg 2160 gggtgtcatg tctcttaggg aaagcaggag cctctctgga gacctttagc agggtcaggg 2220 cccctcacct tcccctcttt tcccagagct gtcttcccag cccaccatcc ccatcgtggg 2280 catcattgct ggcctggttc tccttggagc tgtgatcact ggagctgtgg tcgctgccgt 2340 gatgtggagg aggaagagct caggtggaga aggggtgaag ggtggggtct gagatttctt 2400 gtctcactga gggttccaag ccccagctag aaatgtgccc tgtctcatta ctgggaagca 2460 ccgtccacaa tcatgggcct acccagtctg ggccctgtgt gccagcactt actcttttgt 2520 aaagcacctg ttaaaatgaa ggacagattt atcaccttga ttacggcggt gatgggacct 2580 gatcccagca gtcacaagtc acaggggaag gtccctgagg acagacctca ggagggctat 2640 tggtccagga cccacacctg ctttcttcat gtttcctgat cccgccctgg gtctgcagtc 2700 acacatttct ggaaacttct ctggggtcca agactaggag gttcctctag gaccttaagg 2760 ccctggctcc tttctggtat ctcacaggac attttcttct cacagataga aaaggaggga 2820 gttacactca ggctgcaagt aagtatgaag gaggctgatg cctgaggtcc ttgggatatt 2880 gtgtttggga gcccatgggg gagctcaccc acctcacaat tcctcctcta gccacatctt 2940 ctgtgggatc tgaccaggtt ctgtttttgt tctaccccag gcagtgacag tgcccagggc 3000 tctgatgtgt ccctcacagc ttgtaaaggt gagagcttgg aggacctaat gtgtgttggg 3060 tgttgggcgg aacagtggac acagctgtgc tatggggttt ctttgcattg gatgtattga 3120 gcatgcgatg ggctgtttaa ggtgtgaccc ctcactgtga tggatatgaa tttgttcatg 3180 aatatttttt tctatagtgt gagacagctg ccttgtgtgg gactgagagg caagagttgt 3240 tcctgccctt ccctttgtga cttgaagaac cctgactttg tttctgcaaa ggcacctgc 3299 // ID LN877323; SV 2; linear; genomic DNA; STD; HUM; 3346 BP. XX AC LN877323; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*18:02 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3346 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; d53a055d7343382da02f1b882467ba89. DR IMGT/HLA; HLA-C*18:02:01; HLA00484. XX FH Key Location/Qualifiers FH FT source 1..3346 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300116" FT /db_xref="taxon:9606" FT CDS join(281..353,484..753,1000..1275,1863..2138,2260..2379, FT 2819..2851,2959..3006,3171..3175) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*18:02" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A142JA41" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A142JA41" FT /protein_id="CUA55066.1" FT /translation="MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVNLRK FT LRGYYNQSEDGSHTLQRMFGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWKPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT exon <281..353 FT /gene="HLA-C" FT /allele="HLA-C*18:02" FT /number=1 FT intron 354..483 FT /gene="HLA-C" FT /allele="HLA-C*18:02" FT /number=1 FT exon 484..753 FT /gene="HLA-C" FT /allele="HLA-C*18:02" FT /number=2 FT intron 754..999 FT /gene="HLA-C" FT /allele="HLA-C*18:02" FT /number=2 FT exon 1000..1275 FT /gene="HLA-C" FT /allele="HLA-C*18:02" FT /number=3 FT intron 1276..1862 FT /gene="HLA-C" FT /allele="HLA-C*18:02" FT /number=3 FT exon 1863..2138 FT /gene="HLA-C" FT /allele="HLA-C*18:02" FT /number=4 FT intron 2139..2259 FT /gene="HLA-C" FT /allele="HLA-C*18:02" FT /number=4 FT exon 2260..2379 FT /gene="HLA-C" FT /allele="HLA-C*18:02" FT /number=5 FT intron 2380..2818 FT /gene="HLA-C" FT /allele="HLA-C*18:02" FT /number=5 FT exon 2819..2851 FT /gene="HLA-C" FT /allele="HLA-C*18:02" FT /number=6 FT intron 2852..2958 FT /gene="HLA-C" FT /allele="HLA-C*18:02" FT /number=6 FT exon 2959..3006 FT /gene="HLA-C" FT /allele="HLA-C*18:02" FT /number=7 FT intron 3007..3170 FT /gene="HLA-C" FT /allele="HLA-C*18:02" FT /number=7 FT exon 3171..>3175 FT /gene="HLA-C" FT /allele="HLA-C*18:02" FT /number=8 XX SQ Sequence 3346 BP; 620 A; 978 C; 1048 G; 700 T; 0 other; gatcaggacg aagtcccagg tcccgggcgg ggctctcagg gtctcaggct ccaagggccg 60 tgtctgcatt ggggaggcgc cgcgttgggg attctccact cccctgagtt tcacttctcc 120 caacctgcgt cgggtccttc ttcctgaata ctcatgacgc gtccccaatt cccactccca 180 ttgggtgtcg ggttctagag aagccaatca gcgtctccgc agtcccggtt ctaaagtccc 240 cagtcaccca cccggactca cattctcccc agaggccgag atgcgggtca tggcgccccg 300 agccctcctc ctgctgctct cgggaggcct ggccctgacc gagacctggg cctgtgagtg 360 cggggttggg agggaagcgg cctctgcgga gaggagcgag gggccctccc ggcgagggcg 420 caggacccgg ggagccgcgc agggaggtgg gtcgggcggg tctcagcccc tcctcgcccc 480 caggctccca ctccatgagg tatttcgaca ccgccgtgtc ccggcccggc cgcggagagc 540 cccgcttcat ctcagtgggc tacgtggacg acacgcagtt cgtgcggttc gacagcgacg 600 ccgcgagtcc gagaggggag ccccgggcgc cgtgggtgga gcaggagggg ccggagtatt 660 gggaccggga gacacagaag tacaagcgcc aggcacaggc tgaccgagtg aacctgcgga 720 aactgcgcgg ctactacaac cagagcgagg acggtgagtg accccggccc ggggcgcagg 780 tcacgacccc tccccatccc ccacggacgg cccgggtcgc cccgagtctc cccgtctgag 840 atccaccccg aggctgcgga acccgcccag accctcgacc ggagagagcc ccagtcacct 900 ttacccggtt tcattttcag tttaggccaa aatccccgcg ggttggtcgg gactggggcg 960 gggctcgggg gacggggctg accacggggg cggggccagg gtctcacacc ctccagagga 1020 tgtttggctg cgacctgggg ccggacgggc gcctcctccg cgggtataac cagttcgcct 1080 acgacggcaa ggattacatc gccctgaacg aggatctgcg ctcctggacc gccgcggaca 1140 cggcggctca gatcacccag cgcaagtggg aggcggcccg tgaggcggag cagcggagag 1200 cctacctgga gggcacgtgc gtggagtggc tccgcagata cctggagaac gggaaggaga 1260 cgctgcagcg cgcgggtacc aggggcagtg gggagccttc cccatctccc gtagatctcc 1320 cgggatggcc tcccacgagg aggggaggaa aatgggatca gcgctagaat atcgccctcc 1380 cttgaatgga gaatgggatg agttttcctg agtttcctct gagggccccc tctgctctct 1440 aggacaatta agggatgaag tccttgagga aatggagggg aagacagtcc ctggaatact 1500 gatcaggggt cccctttgac cactttgacc actgcagcag ctgtggtcag gctgctgacc 1560 tttctctcag gccttgttct ctgcctcacg ctcaatgtgt ttgaaggttt gattccagct 1620 tttctgagtc cttcggcctc cactcaggtc aggaccagaa gtcgctgttc ctccctcaga 1680 gactagaact ttccaatgaa taggagatta tcccaggtgc ctgtgtccag gctggcgtct 1740 gggttctgtg cccccttccc caccccaggt gtcctgtcca ttctcaggat ggtcacatgg 1800 gcgctgttgg agtgtcgcaa gagagataca aagtgtctga attttctgac tcttcccatc 1860 agaacaccca aagacacacg tgacccacca tcccgtctct gaccatgagg ccaccctgag 1920 gtgctgggcc ctgggcttct accctgcgga gatcacactg acctggcagt gggatgggga 1980 ggaccaaact caggacaccg agcttgtgga gaccaggcca gcaggagatg gaaccttcca 2040 gaagtgggca gctgtggtgg tgccttctgg agaagagcag agatacacgt gccatgtgca 2100 gcacgagggg ctgccggagc ccctcaccct gagatggagt aaggaggggg atgaggggtg 2160 atgtgtcttc tcagggaaag cagaagtcct ggagcccttc agccgggtca gggctgaggc 2220 ttggaggtca gggcccctca ccttcccctc ctttcccaga gccgtcttcc cagcccacca 2280 tccccatcgt gggcatcgtt gctggcctgg ctgtcctggc tgtcctagct gtcctaggag 2340 ctgtggtggc tgttgtgatg tgtaggagga agagctcagg tagggaaggg gtgaggagtg 2400 gggtctgggt tttcttgttc cactgggagt ttcaagcccc aggtagaagt gtgccccacc 2460 tcgttactgg aagcaccatc cacacatggg ccatcccagc ctgggaccct gtgtgccagc 2520 acttactctg ttgtgaagca catgacaatg aaggacagat gtatcacctt gatgattatg 2580 gtgttggggt ccttgattcc agcattcatg agtcagggga aggtccctgc taaggacaga 2640 ccttaggagg gcagttgctt cagaacccac agctgctttc cccgtgtttc ctgatcctgc 2700 cctgggtctg cagtcatagt tctggaaact tctcttgggt ccaagactag gaggttcccc 2760 taagatcgca tggccctgcc tcctccctgt cccctcacag ggcattttct tcccacaggt 2820 ggaaaaggag ggagctgctc tcaggctgcg tgtaagtgat ggcggtgggc gtgtggagga 2880 gctcacccac cccataattc ctcttgtccc acatctcctg cgggctctga ccaggtcttt 2940 ttttttgttc taccccagcc agcaacagtg cccagggctc tgatgagtct ctcatcgctt 3000 gtaaaggtga gattctgggg agctgaagtg gtcgggggtg gggcagaggg aaaaggccta 3060 ggtaatgggg atcctttgat tgggacgttt cgaatgtgtg gtgagctgtt cagagtgtca 3120 tcacttacca tgactgacct gaatttgttc atgactattg tgttctgtag cctgagacag 3180 ctgcctgtgt gggactgaga tgcaggattt cttcacacct ctcctttgtg acttcaagag 3240 cctctggcat ctctttctgc aaaggcatct gaatgtgtct gcgttcctgt tagcataatg 3300 tgaggaggtg gagagacagc ccacccccgt gtccaccgtg acccct 3346 // ID LN877324; SV 2; linear; genomic DNA; STD; HUM; 3323 BP. XX AC LN877324; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*07:06 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3323 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 732ef6341fd36937111a89618a6d17a6. DR IMGT/HLA; HLA-B*07:06:01; HLA00138. XX FH Key Location/Qualifiers FH FT source 1..3323 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300116" FT /db_xref="taxon:9606" FT CDS join(285..357,486..755,1001..1276,1851..2126,2220..2336, FT 2778..2810,2917..2960) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*07:06" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:H6VGI9" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:H6VGI9" FT /protein_id="CUA55067.1" FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRN FT LRGYYNQSEAGSHTLQSMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*07:06" FT /number=1 FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*07:06" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*07:06" FT /number=2 FT intron 756..1000 FT /gene="HLA-B" FT /allele="HLA-B*07:06" FT /number=2 FT exon 1001..1276 FT /gene="HLA-B" FT /allele="HLA-B*07:06" FT /number=3 FT intron 1277..1850 FT /gene="HLA-B" FT /allele="HLA-B*07:06" FT /number=3 FT exon 1851..2126 FT /gene="HLA-B" FT /allele="HLA-B*07:06" FT /number=4 FT intron 2127..2219 FT /gene="HLA-B" FT /allele="HLA-B*07:06" FT /number=4 FT exon 2220..2336 FT /gene="HLA-B" FT /allele="HLA-B*07:06" FT /number=5 FT intron 2337..2777 FT /gene="HLA-B" FT /allele="HLA-B*07:06" FT /number=5 FT exon 2778..2810 FT /gene="HLA-B" FT /allele="HLA-B*07:06" FT /number=6 FT intron 2811..2916 FT /gene="HLA-B" FT /allele="HLA-B*07:06" FT /number=6 FT exon 2917..>2960 FT /gene="HLA-B" FT /allele="HLA-B*07:06" FT /number=7 XX SQ Sequence 3323 BP; 614 A; 963 C; 1048 G; 698 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccctgagtt tcacttcttc 120 tcccaacttg tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca cttcccactc 180 ccattgggta ttggatatct agagaagcca atcagcgtcg ccgcggtccc agttctaaag 240 tccccacgca cccacccgga ctcagagtct cctcagacgc cgagatgctg gtcatggcgc 300 cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc gggagggaaa tggcctctgc cgggaggagc gaggggaccg caggcggggg 420 cgcaggacct gaggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcacc 480 cccaggctcc cactccatga ggtatttcta cacctccgtg tcccggcccg gccgcgggga 540 gccccgcttc atctcagtgg gctacgtgga cgacacccag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggagta 660 ttgggaccgg aacacacaga tctacaaggc ccaggcacag actgaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg ggactgggct gaccgcgggg ccggggccag ggtctcacac cctccagagc 1020 atgtacggct gcgacgtggg gccggacggg cgcctcctcc gcgggcataa ccagtacgcc 1080 tacgacggca aggattacat cgccctgaac gaggacctgc gctcctggac cgccgcggac 1140 acggcggctc agatcaccca gcgcaagtgg gaggcggccc gtgaggcgga gcagcggaga 1200 gcctacctgg agggcgagtg cgtggagtgg ctccgcagat acctggagaa cgggaaggac 1260 aagctggagc gcgctggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc 1320 cggggatggc ctcccacgag aagaggagga aaatgggatc agcgctagaa tgtcgccctc 1380 cgttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc 1440 tagacaatta aggaatgacg tctctgagga aatggagggg aagacagtcc ctagaatact 1500 gatcaggggt cccctttgac ccctgcagca gccttgggaa ccgtgacttt tcctctcagg 1560 ccttgttctc tgcctcacac tcagtgtgtt tggggctctg attccagcac ttctgagtca 1620 ctttacctcc actcagatca ggagcagaag tccctgttcc ccgctcagag actcgaactt 1680 tccaatgaat aggagattat cccaggtgcc tgcgtccagg ctggtgtctg ggttctgtgc 1740 cccttcccca ccccaggtgt cctgtccatt ctcaggctgg tcacatgggt ggtcctaggg 1800 tgtcccatga aagatgcaaa gcgcctgaat tttctgactc ttcccatcag accccccaaa 1860 gacacacgtg acccaccacc ccatctctga ccatgaggcc accctgaggt gctgggccct 1920 gggtttctac cctgcggaga tcacactgac ctggcagcgg gatggcgagg accaaactca 1980 ggacactgag cttgtggaga ccagaccagc aggagataga accttccaga agtgggcagc 2040 tgtggtggtg ccttctggag aagagcagag atacacatgc catgtacagc atgaggggct 2100 gccgaagccc ctcaccctga gatggggtaa ggagggggat gaggggtcat atctcttctc 2160 agggaaagca ggagcccttc agcagggtca gggcccctca tcttcccctc ctttcccaga 2220 gccgtcttcc cagtccaccg tccccatcgt gggcattgtt gctggcctgg ctgtcctagc 2280 agttgtggtc atcggagctg tggtcgctgc tgtgatgtgt aggaggaaga gttcaggtag 2340 ggaaggggtg aggggtgggg tctgggtttt cttgtcccac tgggggtttc aagccccagg 2400 tagaagtgtt ccctgcctca ttactgggaa gcagcatgca cacaggggct aacgcagcct 2460 gggaccctgt gtgccagcac ttactctttt gtgcagcaca tgtgacaatg aaggatggat 2520 gtatcacctt gatggttgtg gtgttggggt cctgattcca gcattcatga gtcaggggaa 2580 ggtccctgct aaggacagac cttaggaggg cagttggtcc aggacccaca cttgctttcc 2640 tcgtgtttcc tgatcctgcc ctgggtctgt agtcatactt ctggaaattc cttttgggtc 2700 caagactagg aggttcctct aagatctcat ggccctgctt cctcccagtg ccctcacagg 2760 acattttctt cccacaggtg gaaaaggagg gagctactct caggctgcgt gtaagtggtg 2820 ggggtgggag tgtggaggag ctcacccacc ccataattcc tcctgtccca cgtctcctgc 2880 gggctctgac caggtcctgt ttttgttcta ctccaggcag cgacagtgcc cagggctctg 2940 atgtgtctct cacagcttga aaaggtgaga ttcttggggt ctagagtggg tggggtggcg 3000 ggtctggggg tgggtggggc agaggggaaa ggcctgggta atggggattc tttgattggg 3060 atgtttcgcg tgtgtggtgg gctgtttaga gtgtcatcgc ttaccatgac taaccagaat 3120 ttgttcatga ctgttgtttt ctgtagcctg agacagctgt cttgtgaggg actgagatgc 3180 aggatttctt cacgcctccc ctttgtgact tcaagagcct ctggcatctc tttctgcaaa 3240 ggcacctgaa tgtgtctgcg tccctgttag cataatgtga ggaggtggag agacagccca 3300 cccttgtgtc cactgtgacc cct 3323 // ID LN877325; SV 2; linear; genomic DNA; STD; HUM; 3335 BP. XX AC LN877325; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*57:05 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3335 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; be983fd706f49809f828706d393476fb. DR IMGT/HLA; HLA-B*57:05; HLA00385. XX FH Key Location/Qualifiers FH FT source 1..3335 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300116" FT /db_xref="taxon:9606" FT CDS join(285..357,486..755,1001..1276,1852..2127,2232..2348, FT 2790..2822,2929..2972) FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*57:05" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A1D0BZU4" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A1D0BZU4" FT /protein_id="CUA55068.1" FT /translation="MRVTAPRTVLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDGETRNMKASAQTYRENLRI FT ALRYYNQSEAGSHIIQRMYGCDLGPDGRLLRGYNQYAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQRRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*57:05" FT /number=1 FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*57:05" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*57:05" FT /number=2 FT intron 756..1000 FT /gene="HLA-B" FT /allele="HLA-B*57:05" FT /number=2 FT exon 1001..1276 FT /gene="HLA-B" FT /allele="HLA-B*57:05" FT /number=3 FT intron 1277..1851 FT /gene="HLA-B" FT /allele="HLA-B*57:05" FT /number=3 FT exon 1852..2127 FT /gene="HLA-B" FT /allele="HLA-B*57:05" FT /number=4 FT intron 2128..2231 FT /gene="HLA-B" FT /allele="HLA-B*57:05" FT /number=4 FT exon 2232..2348 FT /gene="HLA-B" FT /allele="HLA-B*57:05" FT /number=5 FT intron 2349..2789 FT /gene="HLA-B" FT /allele="HLA-B*57:05" FT /number=5 FT exon 2790..2822 FT /gene="HLA-B" FT /allele="HLA-B*57:05" FT /number=6 FT intron 2823..2928 FT /gene="HLA-B" FT /allele="HLA-B*57:05" FT /number=6 FT exon 2929..>2972 FT /gene="HLA-B" FT /allele="HLA-B*57:05" FT /number=7 XX SQ Sequence 3335 BP; 617 A; 972 C; 1051 G; 695 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagagcct 60 tgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaacctg tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagcgtcg ccgcggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcac 300 cccgaaccgt cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggccggtg 360 agtgcgggtc ggcagggaaa tggcctctgt agggaggagc aaggggaccg caggcggggg 420 cgcaggaccc ggggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcta caccgccatg tcccggcccg gccgcgggga 540 gccccgcttc atcgcagtgg gctacgtgga cgacacccag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgaggatgg cgccccgggc gccatggata gagcaggagg ggccggagta 660 ttgggacggg gagacacgga acatgaaggc ctccgcgcag acttaccgag agaacctgcg 720 gatcgcgctc cgctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccacccccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc agggcggggc 960 ggggctcggg ggacggggct gaccgcgggg ccggggccag ggtctcacat catccagagg 1020 atgtatggct gcgacctggg gcccgacggg cgcctcctcc gcgggtataa ccagtacgcc 1080 tacgacggca aggattacat cgccctgaac gaggacctga gctcctggac cgcggcggac 1140 acggcggctc agatcaccca gcgcaagtgg gaggcggccc gtgtggcgga gcagcggaga 1200 gcctacctgg agggcctgtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag 1260 acgctgcagc gcgcgggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc 1320 cggggatggc ctcccacgag aagaggagga aaatgggatc agcgctagaa tgtcgccctc 1380 ccttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc 1440 taggacaatt aagggatgac gtctctgagg aaatggaggg gaagacagtc cctagaatac 1500 tgatcagggg tcccctttga cccctgcagc agccttggga accgtgactt ttcctctcag 1560 gccttgttct ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc 1620 actttacctc cactcagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact 1680 ttccaatgaa taggagatta tcccaggtgc ctgcgtccag gctggtgtct gggttctgtg 1740 ccccttcccc accccaggtg tcctgcccat tctcaggctg gtcacatggg tggtcctagg 1800 gtgtcccatg agagatgcaa agcgcctgaa ttttctgact cttcccatca gaccccccaa 1860 agacacatgt gacccaccac cccatctctg accatgaggc caccctgagg tgctgggccc 1920 tgggcttcta ccctgcggag atcacactga cctggcagcg ggatggcgag gaccaaactc 1980 aggacaccga gcttgtggag accagaccag caggagatag aaccttccag aagtgggcag 2040 ctgtggtggt gccttctgga gaagagcaga gatacacatg ccatgtacag catgaggggc 2100 tgccaaagcc cctcaccctg agatggggta aggaggggga tgaggggtca tatctcttct 2160 cagggaaagc aggagccctt ctggagccct tcagcagggt cagggcccct catcttcccc 2220 tcctttccca gagccatctt cccaatccac cgtccccatc gtgggcattg ttgctggcct 2280 ggctgtccta gcagttgtgg tcatcggagc tgtggtcgct gctgtgatgt gtaggaggaa 2340 gagctcaggt agggaagggg tgaggggtgg ggtctgggtt ttcttgtccc actgggggtt 2400 tcaagcccca ggtagaagtg ttccctgcct cattactggg aagcagcatg cacacagggg 2460 ctaacgcagc ctgggaccct gtgtgccagc acttactctt ttgtgcagca catgtgacaa 2520 tgaaggacgg atgtatcacc ttgatggttg tggtgttggg gtcctgattc cagcattcat 2580 gagtcagggg aaggtccctg ctaaggacag accttaggag agcagttggt ccaggaccca 2640 cacttgcttt cctcgtgttt cctgatcctg ccctgggtct gtagtcatac ttctggaaat 2700 tccttttggg tccaagacga ggaggttcct ctaagatctc atggccctgc ttcctcccag 2760 tcccctcaca ggacattttc ttcccacagg tggaaaagga gggagctact ctcaggctgc 2820 gtgtaagtgg tgggggtggg agtgtggagg agctcaccca ccccataatt cctcctgtcc 2880 cacgtctcct gcgggctctg accaggtcct gtttttgttc tactccaggc agcgacagtg 2940 cccagggctc tgatgtgtct ctcacagctt gaaaaggtga gattcttggg gtctagagtg 3000 ggtgggggtg gcgggtctgg ggcggggtgg ggcagagggg aaaggcctgg gtaatggaga 3060 ttctttgatt gggatgtttc gcgtgtgtgg tgggctgttc agagtgtcat cacttaccat 3120 gactcaccag aatttgttca tgactgttgt tttctgtagc ctgagacagc tgtcttgtga 3180 gggactgaga tgcaggattt cttcacgcct cccctttgtg acttcaagag cctctggcat 3240 ctctttctgc aaaggcacct gaatgtgtct gcgtccctgt tagcctaatg tgaggaggtg 3300 gagagacagc ccaaccttgt gtccactgtg acccc 3335 // ID LN877326; SV 2; linear; genomic DNA; STD; HUM; 3323 BP. XX AC LN877326; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*44:03:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3323 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 83f22de8d085ea321aad42dbf25a571a. DR Ensembl-Gn; ENSG00000224608; homo_sapiens. DR Ensembl-Tr; ENST00000435618; homo_sapiens. DR IMGT/HLA; HLA-B*44:03:01:01; HLA00319. XX FH Key Location/Qualifiers FH FT source 1..3323 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300117" FT /db_xref="taxon:9606" FT CDS join(285..357,487..756,1000..1275,1851..2126,2220..2336, FT 2778..2810,2917..2960) FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q2L6G2" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q2L6G2" FT /protein_id="CUA55069.1" FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRT FT ALRYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQDAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGLCVESLRRYLENGKETLQRADPPKTHVTHHPISDHE FT VTLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=1 FT intron 358..486 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=1 FT exon 487..756 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=2 FT intron 757..999 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=2 FT exon 1000..1275 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=3 FT intron 1276..1850 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=3 FT exon 1851..2126 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=4 FT intron 2127..2219 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=4 FT exon 2220..2336 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=5 FT intron 2337..2777 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=5 FT exon 2778..2810 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=6 FT intron 2811..2916 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=6 FT exon 2917..>2960 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=7 XX SQ Sequence 3323 BP; 614 A; 966 C; 1052 G; 691 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccct cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggccggtg 360 agtgcggggt cgggagggaa atggcctctg tggggaggag agaggggacc gcaggcgggg 420 gcgcaggacc cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg 540 agccccgctt catcaccgtg ggctacgtgg acgacacgct gttcgtgagg ttcgacagcg 600 acgccacgag tccgaggaag gagccgcggg cgccatggat agagcaggag gggccggagt 660 attgggaccg ggagacacag atctccaaga ccaacacaca gacttaccga gagaacctgc 720 gcaccgcgct ccgctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgccccc gaggccgcgg gacccgccca gaccctcgac cggcgagagc cccaggcgcg 900 tttacccggt ttcattttca gttgaggcca aaatccccgc gggttggtcg gggcggggcg 960 gggctcgggg gacggggctg accgcggggc cggggccagg gtctcacatc atccagagga 1020 tgtacggctg cgacgtgggg ccggacgggc gcctcctccg cgggtatgac caggacgcct 1080 acgacggcaa ggattacatc gccctgaacg aggacctgag ctcctggacc gcggcggaca 1140 ccgcggctca gatcacccag cgcaagtggg aggcggcccg tgtggcggag cagctgagag 1200 cctacctgga gggcctgtgc gtggagtcgc tccgcagata cctggagaac gggaaggaga 1260 cgctgcagcg cgcgggtacc aggggcagtg gggagccttc cccatctcct ataggtcgcc 1320 ggggatggcc tcccacgaga agaggaggaa aatgggatca gcgctagaat gtcgccctcc 1380 cttgaatgga gaatggcatg agttttcctg agtttcctct gagggccccc tcttctctct 1440 aggacaatta agggatgacg tctctgagga aatggagggg aagacagtcc ctagaatact 1500 gatcaggggt cccctttgac ccctgcagca gccttgggaa ccgtgacttt tcctctcagg 1560 ccttgttctc tgcctcacac tcagtgtgtt tggggctctg attccagcac ttctgagtca 1620 ctttacctcc actcagatca ggagcagaag tccctgttcc ccgctcagag actcgaactt 1680 tccaatgaat aggagattat cccaggtgcc tgcgtccagg ctggtgtctg ggttctgtgc 1740 cccttcccca ccccaggtgt cctgtccatt ctcaggctgg tcacatgggt ggtcctaggg 1800 tgtcccatga gagatgcaaa gcgcctgaat tttctgactc ttcccatcag accccccaaa 1860 gacacatgtg acccaccacc ccatctctga ccatgaggtc accctgaggt gctgggccct 1920 gggcttctac cctgcggaga tcacactgac ctggcagcgg gatggcgagg accaaactca 1980 ggacaccgag cttgtggaga ccagaccagc aggagataga accttccaga agtgggcagc 2040 tgtggtggtg ccttctggag aagagcagag atacacatgc catgtacagc atgaggggct 2100 gccgaagccc ctcaccctga gatggggtaa ggagggggat gaggggtcat atctcttctc 2160 agggaaagca ggagcccttc agcagggtca gggcccctca tcttcccttc ctttcccaga 2220 gccgtcttcc cagtccaccg tccccatcgt gggcattgtt gctggcctgg ctgtcctagc 2280 agttgtggtc atcggagctg tggtcgctgc tgtgatgtgt aggaggaaga gctcaggtag 2340 ggaaggggtg aggggtgggg tctgggtttt cttgtcccac tgggggtttc aagccccagg 2400 tagaagtgtt ccctgcctca ttactgggaa gcagcatcca cacaggggct aacgcagcct 2460 gggaccctgt gtgccagcac ttactctttt gtgcagcaca tgtgacaatg aaggacggat 2520 gtatcacctt ggtggttgtg gtgttggggt cctgattcca gcattcatga gtcaggggaa 2580 ggtccctgct aaggacagac cttaggaggg cagttggtcc aggacccaca cttgctttcc 2640 tcgtgtttcc tgatcctgcc ttgggtctgt agtcatactt ctggaaattc cttttgggtc 2700 caagacgagg aggttcctct aagatctcat ggccctgctt cctcccagtc ccctcacagg 2760 gcattttctt cccacaggtg gaaaaggagg gagctactct caggctgcgt gtaagtgatg 2820 ggggcgggag tgtggaggag ctcacccacc ccataattcc tcctgtccca cgtctcctgc 2880 gggctctgac caggtcctgt ttttgttcta ctccaggcag cgacagtgcc cagggctctg 2940 atgtgtctct cacagcttga aaaggtgaga ttcttggggt ctagagtggg tggggtggca 3000 ggtctggggg tgggtggggc agtggggaaa ggcctgggta atggagattc tttgattggg 3060 atgtttcgcg tgtgtggtgg gctgtttaga gtgtcatcac ttaccatgac taaccagaat 3120 ttgttcatga ctgttgtttt ctgtagcctg agacagctgt cttgtgaggg actgagatgc 3180 aggatttctt cacgcctccc ctttgtgact tcaagagcct ctggcatctc tttctgcaaa 3240 ggcacctgaa tgtgtctgcg tccctgttag cataatgtga ggaggtggag agacagccca 3300 cccccgtgtc caccgtgacc cct 3323 // ID LN877327; SV 2; linear; genomic DNA; STD; HUM; 3322 BP. XX AC LN877327; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*08:33 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3322 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 704bdddcfc1c52e4181d4c12a4e25e54. DR IMGT/HLA; HLA-B*08:33; HLA02849. XX FH Key Location/Qualifiers FH FT source 1..3322 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300117" FT /db_xref="taxon:9606" FT CDS join(285..357,486..755,1002..1277,1850..2125,2219..2335, FT 2777..2809,2916..2959) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*08:33" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A4FRG0" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A4FRG0" FT /protein_id="CUA55070.1" FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFDTAMSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIFKTNTQTDRESLRN FT LRGYYNQSEAGSHTLQSLYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAARVAEQDRAYLEGTCVEWLRRYLENGKDTLERADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*08:33" FT /number=1 FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*08:33" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*08:33" FT /number=2 FT intron 756..1001 FT /gene="HLA-B" FT /allele="HLA-B*08:33" FT /number=2 FT exon 1002..1277 FT /gene="HLA-B" FT /allele="HLA-B*08:33" FT /number=3 FT intron 1278..1849 FT /gene="HLA-B" FT /allele="HLA-B*08:33" FT /number=3 FT exon 1850..2125 FT /gene="HLA-B" FT /allele="HLA-B*08:33" FT /number=4 FT intron 2126..2218 FT /gene="HLA-B" FT /allele="HLA-B*08:33" FT /number=4 FT exon 2219..2335 FT /gene="HLA-B" FT /allele="HLA-B*08:33" FT /number=5 FT intron 2336..2776 FT /gene="HLA-B" FT /allele="HLA-B*08:33" FT /number=5 FT exon 2777..2809 FT /gene="HLA-B" FT /allele="HLA-B*08:33" FT /number=6 FT intron 2810..2915 FT /gene="HLA-B" FT /allele="HLA-B*08:33" FT /number=6 FT exon 2916..>2959 FT /gene="HLA-B" FT /allele="HLA-B*08:33" FT /number=7 XX SQ Sequence 3322 BP; 611 A; 968 C; 1049 G; 694 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccctgagtt tcacttcttc 120 tcccaacttg tgtcgggtcc ttcttccagg atactcgtga cgcatcccca cttcccactc 180 ccattgggtg tcggatatct agagaagcca atcagcgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagagtct cctcagacgc cgagatgctg gtcatggcgc 300 cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc gggagggaaa tggcctctgc cgggaggagc gaggggaccg caggcggggg 420 cgcaggacct gaggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcga caccgccatg tcccggcccg gccgcgggga 540 gccccgcttc atctcagtgg gctacgtgga cgacacgcag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggagta 660 ttgggaccgg aacacacaga tcttcaagac caacacacag actgaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacggacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg gggacggggc tgaccgcggg gccggggcca gggtctcaca ccctccagag 1020 cttgtacggc tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcata accagtacgc 1080 ctacgacggc aaggattaca tcgccctgaa cgaggacctg cgctcctgga ccgcggcgga 1140 caccgcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcaggacag 1200 agcctacctg gagggcacgt gcgtggagtg gctccgcaga tacctggaga acgggaagga 1260 cacgctggag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320 ccggggatgg cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct 1380 cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440 ctagacaatt aagggatgac gtctctgagg aaatggaggg gaagacagtc cctagaatac 1500 tgatcagggg tcccctttga cccctgcagc agccttggga accgtgactt ttcctctcag 1560 gccttgttct ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc 1620 actttacctc cactcagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact 1680 ttccaatgaa taggagatta tcccaggtgc ctgcatccgc tggtgtctgg gttctgtgcc 1740 ccttccccac cccaggtgtc ctgtccattc tcaggctggt cacatgggtg gtcctagggt 1800 gtgccatgag agatgcaaag cgcctgaatt ttctgactct tcccatcaga ccccccaaag 1860 acacacgtga cccaccaccc catctctgac catgaggcca ccctgaggtg ctgggccctg 1920 ggcttctacc ctgcggagat cacactgacc tggcagcggg atggcgagga ccaaactcag 1980 gacactgagc ttgtggagac cagaccagca ggagatagaa ccttccagaa gtgggcagct 2040 gtggtggtgc cttctggaga agagcagaga tacacatgcc atgtacagca tgaggggctg 2100 ccgaagcccc tcaccctgag atggggtaag gagggggatg aggggtcata tctcttctca 2160 gggaaagcag gagcccttca gcagggtcag ggcccctcat cttcccctcc tttcccagag 2220 ccgtcttccc agtccaccgt ccccatcgtg ggcattgttg ctggcctggc tgtcctagca 2280 gttgtggtca tcggagctgt ggtcgctgct gtgatgtgta ggaggaagag ctcaggtagg 2340 gaaggggtga ggggtggggt ctgggttttc ttgtcccact gggggtttca agccccaggt 2400 agaagtgttc cctgcctcat tactgggatg cagcatccac acaggggcta acgcagcctg 2460 ggaccctgtg tgccagcact tactcttttg tgcagcacat gtgacaatga aggacggatg 2520 tatcaccttg gtggttgtgg tgttggggtc ctgattccag cattcatgag tcaggggaag 2580 gtccctgcta aggacagacc ttaggagggc agttggtcca ggacccacac ttgctttcct 2640 cgtgtttcct gatcctgcct tgggtctgta gtcatacttc tggaaattcc ttttgggtcc 2700 aagacgagga ggttcctcta agatctcatg gccctgcttc ctcccagtcc cctcacaggg 2760 cattttcttc ccacaggtgg aaaaggaggg agctactctc aggctgcgtg taagtgatgg 2820 gggtgggagt gtggaggagc tcacccaccc cataattcct cctgtcccac gtctcctgcg 2880 ggctctgacc aggtcctgtt tttgttctac tccaggcagc gacagtgccc agggctctga 2940 tgtgtctctc acagcttgaa aaggtgagat tcttggggtc tagagtgggt ggggtggcgg 3000 gtctgggggt gggtggggca gtggggaaag gcctgggtaa tggagattct ttgattggga 3060 tgtttcgcgt gtgtggtggg ctgtttagag tgtcatcact taccatgact aaccagaatt 3120 tgttcatgac tgttgttttc tgtagcctga gacagctgtc ttgtgaggga ctgagatgca 3180 ggatttcttc acgcctcccc tttgtgactt caagagcctc tggcatctct ttctgcaaag 3240 gcacctgaat gtgtctgcgt ccctgttagc ataatgtgag gaggtggaga gacagcccac 3300 ccttgtgtcc actgtgaccc ct 3322 // ID LN877328; SV 2; linear; genomic DNA; STD; HUM; 3331 BP. XX AC LN877328; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*56:01new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3331 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; c2d5b305ba9642b49fbf3fe251db6074. DR IMGT/HLA; HLA-B*56:01:01:03; HLA14086. XX FH Key Location/Qualifiers FH FT source 1..3331 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300118" FT /db_xref="taxon:9606" FT CDS join(285..357,486..755,1001..1276,1852..2127,2232..2348, FT 2790..2822,2929..2972) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*56:01new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:C6K6I6" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:C6K6I6" FT /protein_id="CUA55071.1" FT /translation="MRVTAPRTLLLLLWGALALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRN FT LRGYYNQSEAGSHTWQTMYGCDLGPDGRLLRGHNQLAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*56:01new" FT /number=1 FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*56:01new" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*56:01new" FT /number=2 FT intron 756..1000 FT /gene="HLA-B" FT /allele="HLA-B*56:01new" FT /number=2 FT exon 1001..1276 FT /gene="HLA-B" FT /allele="HLA-B*56:01new" FT /number=3 FT intron 1277..1851 FT /gene="HLA-B" FT /allele="HLA-B*56:01new" FT /number=3 FT exon 1852..2127 FT /gene="HLA-B" FT /allele="HLA-B*56:01new" FT /number=4 FT intron 2128..2231 FT /gene="HLA-B" FT /allele="HLA-B*56:01new" FT /number=4 FT exon 2232..2348 FT /gene="HLA-B" FT /allele="HLA-B*56:01new" FT /number=5 FT intron 2349..2789 FT /gene="HLA-B" FT /allele="HLA-B*56:01new" FT /number=5 FT exon 2790..2822 FT /gene="HLA-B" FT /allele="HLA-B*56:01new" FT /number=6 FT intron 2823..2928 FT /gene="HLA-B" FT /allele="HLA-B*56:01new" FT /number=6 FT exon 2929..>2972 FT /gene="HLA-B" FT /allele="HLA-B*56:01new" FT /number=7 XX SQ Sequence 3331 BP; 615 A; 964 C; 1053 G; 699 T; 0 other; gatcaggacg aagtcccatg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagagtct cctcagacac cgagatgcgg gtcacggcac 300 cccgaaccct cctcctgctg ctctgggggg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc gggagggaaa tggcctctgt ggggaggagc gaggggaccg caggcggggg 420 cgcaggaccc ggggagccgc gccgggagga gggtctggcg ggtctcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcta caccgccatg tcccggcccg gccgcgggga 540 gccccgcttc atcgcagtgg gctacgtgga cgacacgcag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggagta 660 ttgggaccgg aacacacaga tctacaaggc ccaggcacag actgaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg ggacggggct gaccgcgggg ccggggccag ggtctcacac ttggcagacg 1020 atgtatggct gcgacctggg gccggacggg cgcctcctcc gcgggcataa ccagttagcc 1080 tacgacggca aggattacat cgccctgaac gaggacctga gctcctggac cgcggcggac 1140 accgcggctc agatcaccca gcgcaagtgg gaggcggccc gtgtggcgga gcagctgaga 1200 gcctacctgg agggcctgtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag 1260 acgctgcagc gcgcgggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc 1320 cggggatggc ctcccacgag aagaggagga aaatgggatc agcgctagaa tgtcgccctc 1380 ccttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc 1440 taggacaatt aagggatgac gtctctgagg aaatggaggg gaagacagtc cctagaatac 1500 tgatcagggg tcctctttga cccctgcagc agccttggga accgtgactt ttcctctcag 1560 gccttgttct ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc 1620 actttacctc cactcagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact 1680 ttccaatgaa taggagatta tcccaggtgc ctgcgtccag gctggtgtct gggttctgtg 1740 ccccttcccc accccaggtg tcctgtccat tctcaggctg gtcacatggg tggtcctagg 1800 gtgtcctatg agagatgcaa agcgcctgaa ttttctgact cttcccatca gaccccccaa 1860 agacacacgt gacccaccac cccatctctg accatgaggc caccctgagg tgctgggccc 1920 tgggcttcta ccctgcggag atcacactga cctggcagcg ggatggcgag gaccaaactc 1980 aggacactga gcttgtggag accagaccag caggagatag aaccttccag aagtgggcag 2040 ctgtggtggt gccttctgga gaagagcaga gatacacatg ccatgtacag catgaggggc 2100 tgccgaagcc cctcaccctg agatggggta aggaggggga tgaggggtca tatctcttct 2160 cagggaaagc aggagccctt ctggagccct tcagcagggt cagggcccct cgtcttcccc 2220 tcctttccca gagccatctt cccagtccac catccccatc gtgggcattg ttgctggcct 2280 ggctgtccta gcagttgtgg tcatcggagc tgtggtcgct actgtgatgt gtaggaggaa 2340 gagctcaggt agggaagggg tgaggggtgg ggtctgggtt ttcttgtccc actgggggtt 2400 tcaagcccca ggtagaagtg ttccctgcct cattactggg aagcagcatc cacacagggg 2460 ctaatgcagc ctgggaccct gtgtgccagc acttactctt ttgtgcagca catgtgacaa 2520 tgaaggacgg atgtatcacc ttgatggttg tggtgttggg gtcctgattt cagcattcat 2580 gagtcagggg aaggtccctg ctaaggacag accttaggag ggcagttggt ccaggaccca 2640 cacttgcttt cctcgtgttt cctgatcctg ccttgggtct gtagtcatac ttctggaaat 2700 tccttttggg tccaagacga ggaggttcct ctaagatctc atggccctgc ttcctcccag 2760 tcccctcaca ggacattttc ttcccacagg tggaaaagga gggagctact ctcaggctgc 2820 gtgtaagtgg tgggggtggg agtgtggagg agctcaccca ccccataatt cctcctgtcc 2880 cacgtctcct gcgggctctg accaggtcct gtttttgttc tactccagcc agcgacagtg 2940 cccagggctc tgatgtgtct ctcacagctt gaaaaggtga gattcttggg gtctagagtg 3000 ggcggggggg gtggggtggg gagggggcag aggggaaagg cctgggtaat ggagattctt 3060 tgattgggat gtttcgcgtg tgtggtgggc tgtttagagt gtcatcactt accatgacta 3120 accagaattt gttcatgact gttgttttct gtagcctgag acagctgtct tgtgagggac 3180 tgagatgcag gatttcttca ctcctcccct ttgtgacttc aagagcctct ggcatctctt 3240 tctgcaaagg cacctgaatg tgtctgcgtc cctgttagca taatgtgagg aggtggagag 3300 acagcccacc cccgtgtcca ctgtgacccc t 3331 // ID LN877329; SV 2; linear; genomic DNA; STD; HUM; 3349 BP. XX AC LN877329; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*04:10 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3349 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 15c978489d9a7bc76476499902ca229b. DR IMGT/HLA; HLA-C*04:10; HLA01645. XX FH Key Location/Qualifiers FH FT source 1..3349 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300118" FT /db_xref="taxon:9606" FT CDS join(284..356,487..756,1003..1278,1866..2141,2263..2382, FT 2822..2854,2962..3009,3174..3178) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*04:10" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A1D0C3F9" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A1D0C3F9" FT /protein_id="CUA55072.1" FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFSTSVSWPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPREPWVEQEGPEYWDRETQKYKRQAQTDRVNLRK FT LRGYYNQSEDGSHTLQRMFGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWKPSSQPTIPIVGIVAGLAVLAVLAVLGAMVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT exon <284..356 FT /gene="HLA-C" FT /allele="HLA-C*04:10" FT /number=1 FT intron 357..486 FT /gene="HLA-C" FT /allele="HLA-C*04:10" FT /number=1 FT exon 487..756 FT /gene="HLA-C" FT /allele="HLA-C*04:10" FT /number=2 FT intron 757..1002 FT /gene="HLA-C" FT /allele="HLA-C*04:10" FT /number=2 FT exon 1003..1278 FT /gene="HLA-C" FT /allele="HLA-C*04:10" FT /number=3 FT intron 1279..1865 FT /gene="HLA-C" FT /allele="HLA-C*04:10" FT /number=3 FT exon 1866..2141 FT /gene="HLA-C" FT /allele="HLA-C*04:10" FT /number=4 FT intron 2142..2262 FT /gene="HLA-C" FT /allele="HLA-C*04:10" FT /number=4 FT exon 2263..2382 FT /gene="HLA-C" FT /allele="HLA-C*04:10" FT /number=5 FT intron 2383..2821 FT /gene="HLA-C" FT /allele="HLA-C*04:10" FT /number=5 FT exon 2822..2854 FT /gene="HLA-C" FT /allele="HLA-C*04:10" FT /number=6 FT intron 2855..2961 FT /gene="HLA-C" FT /allele="HLA-C*04:10" FT /number=6 FT exon 2962..3009 FT /gene="HLA-C" FT /allele="HLA-C*04:10" FT /number=7 FT intron 3010..3173 FT /gene="HLA-C" FT /allele="HLA-C*04:10" FT /number=7 FT exon 3174..>3178 FT /gene="HLA-C" FT /allele="HLA-C*04:10" FT /number=8 XX SQ Sequence 3349 BP; 629 A; 974 C; 1044 G; 702 T; 0 other; aatcaggacg aagtcccagg tcccgggcgg ggctctcagg gtctcaggct ccaagggccg 60 tgtctgcact ggggaggcgc cgcgttgggg attctccact cccctgagtt tcacttcttc 120 tcccaacctg cgtcgggtcc ttcttcctga atactcatga cgcgtcccca attcccactc 180 ccattgggtg tcgggttcta gagaagccaa tcagcgtctc cgcagtcccg gttctaaagt 240 ccccagtcac ccacccggac tcagattctc cccagacgcc gagatgcggg tcatggcgcc 300 ccgaaccctc atcctgctgc tctcgggagc cctggccctg accgagacct gggccggtga 360 gtgcggggtt gggagggaaa cggcctctgg ggagaggagc gaggggcccg cccggcgagg 420 gcgcaggacc cggggagccg cgcagggagg agggtcgggc gggtctcagc cactcctcgt 480 ccccaggctc ccactccatg aggtatttct ccacatccgt gtcctggccc ggccgcgggg 540 agccccgctt catcgcagtg ggctacgtgg acgacacgca gttcgtgcgg ttcgacagcg 600 acgccgcgag tccaagaggg gagccgcggg agccgtgggt ggagcaggag gggccggagt 660 attgggaccg ggagacacag aagtacaagc gccaggcaca gactgaccga gtgaacctgc 720 ggaaactgcg cggctactac aaccagagcg aggacggtga gtgaccccgg cccggggcgc 780 aggtcacgac ccctccccat cccccacgga cggcccgggt cgccccgagt ctccccgtct 840 gagatccacc ccgaggctgc ggaacccgcc cagaccctcg accggagaga gccccagtca 900 cctttacccg gtttcatttt cagtttaggc caaaatcccc gcgggttggt cgggactggg 960 gcggggctcg ggggaccggg ctgaccacgg gggcggggcc agggtctcac accctccaga 1020 ggatgtttgg ctgcgacctg gggccggacg ggcgcctcct ccgcgggtat aaccagttcg 1080 cctacgacgg caaggattac atcgccctga acgaggatct gcgctcctgg accgccgcgg 1140 acacggcggc tcagatcacc cagcgcaagt gggaggcggc ccgtgaggcg gagcagcgga 1200 gagcctacct ggagggcacg tgcgtggagt ggctccgcag atacctggag aacgggaagg 1260 agacgctgca gcgcgcgggt accaggggca gtggggagcc ttccccatct cccgtagatc 1320 tcccgggatg gcctcccacg aggaggggag gaaaatggga tcagcgctag aatatcgccc 1380 tcccttgaat ggagaatggg atgagttttc ctgagtttcc tctgagggcc ccctctgctc 1440 tctaggacaa ttaagggatg aagtccttga ggaaatggag gggaagacag tccctggaat 1500 actgatcagg ggtccccttt gaccactttg accactgcag cagctgtggt caggctgctg 1560 acctttctct caggccttgt tctctgcctg acgctcaatg tgtttgaagg tttgattcca 1620 gcttttctga gtccttcggc ctccactcag gtcaggacca gaagtcgctg ttcctccctc 1680 agagactaga actttccaat gaataggaga ttatcccagg tgcctgtgtc caggctggcg 1740 tctgggttct gtgccccctt ccccacccca ggtgtcctgt ccattctcag gatggtcaca 1800 tgggcgctgt tggagtgtcg caagagagat acaaagtgtc tgaattttct gactcttccc 1860 atcagaacac ccaaagacac acgtgaccca ccatcccgtc tctgaccatg aggccaccct 1920 gaggtgctgg gccctgggct tctaccctgc ggagatcaca ctgacctggc agtgggatgg 1980 ggaggaccaa actcaggaca ccgagcttgt ggagaccagg ccagcaggag atggaacctt 2040 ccagaagtgg gcagctgtgg tggtgccttc tggagaagag cagagataca cgtgccatgt 2100 tcagcacgag gggctgccgg agcccctcac cctgagatgg agtaaggagg gggatgaggg 2160 gtgatgtgtc ttctcaggga aagcagaagt cctggagccc ttcagccggg tcagggctga 2220 ggcttggagg tcagggcccc tcaccttccc ctcctttccc agagccgtct tcccagccca 2280 ccatccccat cgtgggcatc gttgctggcc tggctgtcct ggctgtccta gctgtcctag 2340 gagctatggt ggctgttgtg atgtgtagga ggaagagctc aggtagggaa ggggtgagga 2400 gtggggtctg ggttttcttg ttccactggg agtttcaagc cccaggtaga agtgtgcccc 2460 acctcgttac tggaagcacc atccacacat gggccatccc agcctgggac cctgtgtgcc 2520 agcacttact ctgttgtgaa gcacatgaca atgaaggaca gatgtatcac cttgatgatt 2580 atggtgttgg ggtccttgat tccagcattc atgagtcagg ggaaggtccc tgctaaggac 2640 agaccttagg agggcagttg cttcagaacc cacagctgct ttccccgtgt ttcctgatcc 2700 tgccctgggt ctgcagtcat agttctggaa acttctcttg ggtccaagac taggaggttc 2760 ccctaagatc gcatggccct gcctcctccc tgtcccctca cagggcattt tcttcccaca 2820 ggtggaaaag gagggagctg ctctcaggct gcgtgtaagt gatggcggtg ggcgtgtgga 2880 ggagctcacc caccccataa ttcctcttgt cccacatctc ctgcgggctc tgaccaggtc 2940 tttttttttg ttctacccca gccagcaaca gtgcccaggg ctctgatgag tctctcatcg 3000 cttgtaaagg tgagattctg gggagctgaa gtggtcgggg gtggggcaga gggaaaaggc 3060 ctaggtaatg gggatccttt gattgggacg tttcgaatgt gtggtgagct gttcagagtg 3120 tcatcactta ccatgactga cctgaatttg ttcatgacta ttgtgttctg tagcctgaga 3180 cagctgcctg tgtgggactg agatgcagga tttcttcaca cctctccttt gtgacttcaa 3240 gagcctctgg catctctttc tgcaaaggca tctgaatgtg tctgcgttcc tgttagcata 3300 atgtgaggag gtggagagac agcccacccc cgtgtccacc gtgacccct 3349 // ID LN877330; SV 2; linear; genomic DNA; STD; HUM; 3314 BP. XX AC LN877330; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-A gene for MHC class I antigen, allele HLA-A*02:06:01new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3314 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 687bd4763171432b23dcb01f690374f4. DR IMGT/HLA; HLA-A*02:06:01:03; HLA14087. XX FH Key Location/Qualifiers FH FT source 1..3314 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300119" FT /db_xref="taxon:9606" FT CDS join(301..373,504..773,1015..1290,1891..2166,2266..2382, FT 2821..2853,2996..3043,3213..3217) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-A" FT /allele="HLA-A*02:06:01new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q5MAG5" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q5MAG5" FT /protein_id="CUA55073.1" FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGT FT LRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMA FT AQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRK FT GGSYSQAASSDSAQGSDVSLTACKV" FT exon <301..373 FT /gene="HLA-A" FT /allele="HLA-A*02:06:01new" FT /number=1 FT intron 374..503 FT /gene="HLA-A" FT /allele="HLA-A*02:06:01new" FT /number=1 FT exon 504..773 FT /gene="HLA-A" FT /allele="HLA-A*02:06:01new" FT /number=2 FT intron 774..1014 FT /gene="HLA-A" FT /allele="HLA-A*02:06:01new" FT /number=2 FT exon 1015..1290 FT /gene="HLA-A" FT /allele="HLA-A*02:06:01new" FT /number=3 FT intron 1291..1890 FT /gene="HLA-A" FT /allele="HLA-A*02:06:01new" FT /number=3 FT exon 1891..2166 FT /gene="HLA-A" FT /allele="HLA-A*02:06:01new" FT /number=4 FT intron 2167..2265 FT /gene="HLA-A" FT /allele="HLA-A*02:06:01new" FT /number=4 FT exon 2266..2382 FT /gene="HLA-A" FT /allele="HLA-A*02:06:01new" FT /number=5 FT intron 2383..2820 FT /gene="HLA-A" FT /allele="HLA-A*02:06:01new" FT /number=5 FT exon 2821..2853 FT /gene="HLA-A" FT /allele="HLA-A*02:06:01new" FT /number=6 FT intron 2854..2995 FT /gene="HLA-A" FT /allele="HLA-A*02:06:01new" FT /number=6 FT exon 2996..3043 FT /gene="HLA-A" FT /allele="HLA-A*02:06:01new" FT /number=7 FT intron 3044..3212 FT /gene="HLA-A" FT /allele="HLA-A*02:06:01new" FT /number=7 FT exon 3213..>3217 FT /gene="HLA-A" FT /allele="HLA-A*02:06:01new" FT /number=8 XX SQ Sequence 3314 BP; 639 A; 951 C; 1020 G; 704 T; 0 other; cagaagcaga ggggtcaggg cgaagtccca gggccccagg cgtggctctc agggtctcag 60 gccccgaagg cggtgtatgg attggggagt cccagccttg gggattcccc aactccgcag 120 tttcttttct ccctctccca acctatgtag ggtccttctt cctggatact cacgacgcgg 180 acccagttct cactcccatt gggtgtcggg tttccagaga agccaatcag tgtcgtcgcg 240 gtcgcggttc taaagtccgc acgcacccac cgggactcag attctcccca gacgccgagg 300 atggccgtca tggcgccccg aaccctcgtc ctgctactct cgggggctct ggccctgacc 360 cagacctggg cgggtgagtg cggggtcggg agggaaacgg cctctgtggg gagaagcaac 420 gggcccgcct ggcgggggcg caggacccgg gaagccgcgc cgggaggagg gtcgggcggg 480 tctcagccac tcctcgtccc caggctctca ctccatgagg tatttctaca cctccgtgtc 540 ccggcccggc cgcggggagc cccgcttcat cgcagtgggc tacgtggacg acacgcagtt 600 cgtgcggttc gacagcgacg ccgcgagcca gaggatggag ccgcgggcgc cgtggataga 660 gcaggagggt ccggagtatt gggacgggga gacacggaaa gtgaaggccc actcacagac 720 tcaccgagtg gacctgggga ccctgcgcgg ctactacaac cagagcgagg ccggtgagtg 780 accccggccc ggggcgcagg tcacgacctc tcatccccca cggacgggcc aggtcgccca 840 cagtctccgg gtccgagatc cgccccgaag ccgcgggacc ccgagaccct tgccccggga 900 gaggcccagg tgcctttacc cggtttcatt ttcagtttag gccaaaaatc cccccaggtt 960 ggtcggggcg gggcggggct cgggggaccg ggctgaccgc ggggtccggg ccaggttctc 1020 acaccgtcca gaggatgtat ggctgcgacg tggggtcgga ctggcgcttc ctccgcgggt 1080 accaccagta cgcctacgac ggcaaggatt acatcgccct gaaagaggac ctgcgctctt 1140 ggaccgcggc ggacatggca gctcagacca ccaagcacaa gtgggaggcg gcccatgtgg 1200 cggagcagtt gagagcctac ctggagggca cgtgcgtgga gtggctccgc agatacctgg 1260 agaacgggaa ggagacgctg cagcgcacgg gtaccagggg ccacggggcg cctccctgat 1320 cgcctgtaga tctcccgggc tggcctccca caaggagggg agacaattgg gaccaacact 1380 agaatatcgc cctccctctg gtcctgaggg agaggaatcc tcctgggttt ccagatcctg 1440 taccagagag tgactctgag gttccgccct gctctctgac acaattaagg gataaaatct 1500 ctgaaggaat gacgggaaga cgatccctcg aatactgatg agtggttccc tttgacacac 1560 acaggcagca gccttgggcc cgtgactttt cctctcaggc cttgttctct gcttcacact 1620 caatgtgtgt gggggtctga gtccagcact tctgagtcct tcagcctcca ctcaggtcag 1680 gaccagaagt cgctgttccc tcttcaggga ctagaatttt ccacggaata ggagattatc 1740 ccaggtgcct gtgtccaggc tggtgtctgg gttctgtgct cccttcccca tcccaggtgt 1800 cctgtccatt ctcaagatag ccacatgtgt gctggaggag tgtcccatga cagatgcaaa 1860 atgcctgaat gatctgactc ttcctgacag acgcccccaa aacgcatatg actcaccacg 1920 ctgtctctga ccatgaagcc accctgaggt gctgggccct gagcttctac cctgcggaga 1980 tcacactgac ctggcagcgg gatggggagg accagaccca ggacacggag ctcgtggaga 2040 ccaggcctgc aggggatgga accttccaga agtgggcggc tgtggtggtg ccttctggac 2100 aggagcagag atacacctgc catgtgcagc atgagggttt gcccaagccc ctcaccctga 2160 gatggggtaa ggagggagac gggggtgtca tgtcttttag ggaaagcagg agcctctctg 2220 acctttagca gggtcagggc ccctcacctt cccctctttt cccagagccg tcttcccagc 2280 ccaccatccc catcgtgggc atcattgctg gcctggttct ctttggagct gtgatcactg 2340 gagctgtggt cgctgctgtg atgtggagga ggaagagctc aggtggggaa ggggtgaagg 2400 gtgggtctga gatttcttgt ctcactgagg gttccaagac ccaggtagaa gtgtgccctg 2460 cctcgttact gggaagcacc acccacaatt atgggcctac ccagcctggg ccctgtgtgc 2520 cagcacttac tcttttgtaa agcacctgtt aaaatgaagg acagatttat caccttgatt 2580 acagcggtga tgggacctga tcccagcagt cacaagtcac aggggaaggt ccctgaggac 2640 cttcaggagg gcggttggtc caggacccac acctgctttc ttcatgtttc ctgatcccgc 2700 cctgggtctg cagtcacaca tttctggaaa cttctctgag gtccaagact tggaggttcc 2760 tctaggacct taaggccctg actcctttct ggtatctcac aggacatttt cttcccacag 2820 atagaaaagg agggagctac tctcaggctg caagtaagta tgaaggaggc tgatgcctga 2880 ggtccttggg atattgtgtt tgggagccca tgggggagct cacccacccc acaattcctc 2940 ctctagccac atcttctgtg ggatctgacc aggttctgtt tttgttctac cccaggcagt 3000 gacagtgccc agggctctga tgtgtctctc acagcttgta aaggtgagag cctggagggc 3060 ctgatgtgtg ttgggtgttg ggcggaacag tggacacagc tgtgctatgg ggtttctttc 3120 cattggatgt attgagcatg cgatgggctg tttaaagtgt gacccctcac tgtgacagat 3180 acgaatttgt tcatgaatat ttttttctat agtgtgagac agctgccttg tgtgggactg 3240 agaggcaaga gttgttcctg cccttccctt tgtgacttga agaaccctga ctttgtttct 3300 gcaaaggcac ctgc 3314 // ID LN877332; SV 2; linear; genomic DNA; STD; HUM; 3349 BP. XX AC LN877332; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*06:76:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3349 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 7ee4bec13a8063e1cc155287bc0251c0. DR IMGT/HLA; HLA-C*06:76:01; HLA07815. XX FH Key Location/Qualifiers FH FT source 1..3349 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300119" FT /db_xref="taxon:9606" FT CDS join(284..356,487..756,1003..1278,1866..2141,2263..2382, FT 2822..2854,2962..3009,3174..3178) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*06:76:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A1D0BSS2" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A1D0BSS2" FT /protein_id="CUA55075.1" FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMRYFYTAVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVNLRK FT LRGYYNQSEDGSHTLQWMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQWRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVMAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT exon <284..356 FT /gene="HLA-C" FT /allele="HLA-C*06:76:01" FT /number=1 FT intron 357..486 FT /gene="HLA-C" FT /allele="HLA-C*06:76:01" FT /number=1 FT exon 487..756 FT /gene="HLA-C" FT /allele="HLA-C*06:76:01" FT /number=2 FT intron 757..1002 FT /gene="HLA-C" FT /allele="HLA-C*06:76:01" FT /number=2 FT exon 1003..1278 FT /gene="HLA-C" FT /allele="HLA-C*06:76:01" FT /number=3 FT intron 1279..1865 FT /gene="HLA-C" FT /allele="HLA-C*06:76:01" FT /number=3 FT exon 1866..2141 FT /gene="HLA-C" FT /allele="HLA-C*06:76:01" FT /number=4 FT intron 2142..2262 FT /gene="HLA-C" FT /allele="HLA-C*06:76:01" FT /number=4 FT exon 2263..2382 FT /gene="HLA-C" FT /allele="HLA-C*06:76:01" FT /number=5 FT intron 2383..2821 FT /gene="HLA-C" FT /allele="HLA-C*06:76:01" FT /number=5 FT exon 2822..2854 FT /gene="HLA-C" FT /allele="HLA-C*06:76:01" FT /number=6 FT intron 2855..2961 FT /gene="HLA-C" FT /allele="HLA-C*06:76:01" FT /number=6 FT exon 2962..3009 FT /gene="HLA-C" FT /allele="HLA-C*06:76:01" FT /number=7 FT intron 3010..3173 FT /gene="HLA-C" FT /allele="HLA-C*06:76:01" FT /number=7 FT exon 3174..>3178 FT /gene="HLA-C" FT /allele="HLA-C*06:76:01" FT /number=8 XX SQ Sequence 3349 BP; 622 A; 984 C; 1044 G; 699 T; 0 other; gatcaggacg aagtcccagg tcccgggcgg ggctctcagg gtctcaggct ccaagggccg 60 tgtctgcact ggggaggcgc cgcgttgagg attctccact cccctgagtt tcacttcttc 120 tcccaacctg cgtcgggtcc ttcttcctga atactcatga cgcgtcccca attcccactc 180 ccattgggtg tcgggttcta gagaagccaa tcagcgtctc cgcagtcccg gttctaaagt 240 ccccagtcac ccacccggac tcggattctc cccagacgcc gagatgcggg tcatggcgcc 300 ccgaaccctc atcctgctgc tctcgggagc cctggccctg accgagacct gggcctgtga 360 gtgcggggtt gggagggaaa cggcctctgc ggagaggagc gaggggcccg cccggcgagg 420 gcgcaggacc cggggagccg cgcagggagg tgggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccgt gtcccggccc ggccgcggag 540 agccccgctt catcgcagtg ggctacgtgg acgacacgca gttcgtgcgg ttcgacagcg 600 acgccgcgag tccgagaggg gagccccggg cgccgtgggt ggagcaggag gggccggagt 660 attgggaccg ggagacacag aagtacaagc gccaggcaca ggctgaccga gtgaacctgc 720 ggaaactgcg cggctactac aaccagagcg aggacggtga gtgaccccgg cccggggcgc 780 aggtcacgac ccctccccat cccccacgga cggcccgggt cgccccgagt ctcccggtct 840 gagatccacc ccgaggctgc ggaacccgcc cagaccctcg accggagaga gccccagtca 900 cctttacccg gtttcatttt cagtttaggc caaaatcccc gcgggttggt cggggctggg 960 gcggggctcg ggggacgggg ctgaccacgg gggcggggcc agggtctcac accctccagt 1020 ggatgtatgg ctgcgacctg gggcccgacg ggcgcctcct ccgcgggtat gaccagtccg 1080 cctacgacgg caaggattac atcgccctga acgaggacct gcgctcctgg accgccgcgg 1140 acacggcggc tcagatcacc cagcgcaagt gggaggcggc ccgtgaggcg gagcagtgga 1200 gagcctacct ggagggcacg tgcgtggagt ggctccgcag atacctggag aacgggaagg 1260 agacgctgca gcgcgcgggt accaggggca gtggggagcc ttccccatct cctgtagatc 1320 tcccgggatg gcctcccacg aggaggggag gaaaatggga tcagcgctag aatatcgccc 1380 tcccttgaat ggagaatggg atgagttttc ctgagtttcc tctgagggcc ccctctgctc 1440 tctaggacaa ttaagggatg aagtccttga ggaaatggag gggaagacag tccctggaat 1500 actgatcagg ggtccccttt gaccactttg accactgcag cagctgtggt caggctgctg 1560 acctttctct caggccttgt tctctgcctc acgctcaatg tgtttaaagg tttgattcca 1620 gcttttctga gtccttcggc ctccactcag gtcaggacca gaagtcgctg ttcctccctc 1680 agagactaga actttccaat gaataggaga ttatcccagg tgcctgtgtc caggctggcg 1740 tctgggttct gtgccccctt ccccacccca ggtgtcctgt ccattctcag gatggtcaca 1800 tgggcgctgt tggagtgtcg caagagagat acaaagtgtc tgaattttct gactcttccc 1860 gtcagaacac ccaaagacac acgtgaccca ccatcccgtc tctgaccatg aggccaccct 1920 gaggtgctgg gccctgggct tctaccctgc ggagatcaca ctgacctggc agcgggatgg 1980 cgaggaccaa actcaggaca ccgagcttgt ggagaccagg ccagcaggag atggaacctt 2040 ccagaagtgg gcagctgtgg tggtgccttc tggagaagag cagagataca cgtgccatgt 2100 gcagcacgag gggctgccag agcccctcac cctgagatgg ggtaaggagg gggatgaggg 2160 gtcatgtgtc ttctcaggga aagcagaagt cctggagccc ttcagccggg tcagggctga 2220 ggcttggggg tcagggcccc tcaccttccc ctcctttccc agagccatct tcccagccca 2280 ccatccccat cgtgggcatc gttgctggcc tggctgtcct ggctgtccta gctgtcctag 2340 gagctgtgat ggctgttgtg atgtgtagga ggaagagctc aggtagggaa ggggtgagga 2400 gtggggtctg ggttttcttg tcccactggg agtttcaagc cccaggtaga agtgtgcccc 2460 acctcgttac tggaagcacc atccacacat gggccatccc agcctgggac cctgtgtgct 2520 agcacttact ctgttgtgaa gcacatgaca atgaaggaca gatgtatcac cttgatgatt 2580 atggtgttgg ggtccttgat tccagcattc atgagtcagg ggaaggtccc tgctaaggac 2640 agaccttagg agggcagttg ctccagaacc cacagctgct ttccccgtgt ttcctgatcc 2700 tgccctgggt ctgcagtcat agttctggaa acttctcttg ggtccaagac taggaggttc 2760 ccctaagatc gcatggccct gcctcctccc tgtcccctca cagggcattt tcttcccaca 2820 ggtggaaaag gagggagctg ctctcaggct gcgtgtaagt gatggcggtg ggcgtgtgga 2880 ggagctcacc caccccataa ttcctcttgt cccacatctc ctgcgggctc tgaccaggtc 2940 tttttttttg ttctacccca gccagcaaca gtgcccaggg ctctgatgag tctctcatcg 3000 cttgtaaagg tgagattctg gggagctgaa gtggtctggg gtggggcaga gggaaaaggc 3060 ctaggtaatg gggatccttt gattgggacg tttcgaatgt gtggtgagct gttcagagtg 3120 tcatcactta ccatgactga cctgaatttg ttcatgacta ttgtgttctg tagcctgaga 3180 cagctgcctg tgtgggactg agatgcagga tttcttcaca cctctccttt gtgacttcaa 3240 gagcctctgg catctctttc tgcaaaggca tctgaatgtg tctgcgttcc tgttagcata 3300 atgtgaggag gtggagagac agcccacccc cgtgtccacc gtgacccct 3349 // ID LN877333; SV 2; linear; genomic DNA; STD; HUM; 3325 BP. XX AC LN877333; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*47:01:01new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3325 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 61e908e7046862ce3580823851591f81. DR IMGT/HLA; HLA-B*47:01:01:03; HLA14088. XX FH Key Location/Qualifiers FH FT source 1..3325 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300119" FT /db_xref="taxon:9606" FT CDS join(285..357,487..756,1001..1276,1852..2127,2221..2337, FT 2779..2811,2918..2961) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*47:01:01new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A142J2G8" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A142J2G8" FT /protein_id="CUA55076.1" FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYREDLRT FT LLRYYNQSEAGSHTLQRMFGCDVGPDGRLLRGYHQDAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGECVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVVCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*47:01:01new" FT /number=1 FT intron 358..486 FT /gene="HLA-B" FT /allele="HLA-B*47:01:01new" FT /number=1 FT exon 487..756 FT /gene="HLA-B" FT /allele="HLA-B*47:01:01new" FT /number=2 FT intron 757..1000 FT /gene="HLA-B" FT /allele="HLA-B*47:01:01new" FT /number=2 FT exon 1001..1276 FT /gene="HLA-B" FT /allele="HLA-B*47:01:01new" FT /number=3 FT intron 1277..1851 FT /gene="HLA-B" FT /allele="HLA-B*47:01:01new" FT /number=3 FT exon 1852..2127 FT /gene="HLA-B" FT /allele="HLA-B*47:01:01new" FT /number=4 FT intron 2128..2220 FT /gene="HLA-B" FT /allele="HLA-B*47:01:01new" FT /number=4 FT exon 2221..2337 FT /gene="HLA-B" FT /allele="HLA-B*47:01:01new" FT /number=5 FT intron 2338..2778 FT /gene="HLA-B" FT /allele="HLA-B*47:01:01new" FT /number=5 FT exon 2779..2811 FT /gene="HLA-B" FT /allele="HLA-B*47:01:01new" FT /number=6 FT intron 2812..2917 FT /gene="HLA-B" FT /allele="HLA-B*47:01:01new" FT /number=6 FT exon 2918..>2961 FT /gene="HLA-B" FT /allele="HLA-B*47:01:01new" FT /number=7 XX SQ Sequence 3325 BP; 610 A; 967 C; 1052 G; 696 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccct cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggctggtg 360 agtgcggggt cgggagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg 420 gctcaggacc cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg 540 agccccgctt catcaccgtg ggctacgtgg acgacacgct gttcgtgagg ttcgacagcg 600 acgccacgag tccgaggaag gagccgcggg cgccatggat agagcaggag gggccggagt 660 attgggaccg ggagacacag atctccaaga ccaacacaca gacttaccga gaggacctgc 720 ggaccctgct ccgctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgccccc gaggccgcgg gacccgccca gaccctcgac cggcgagagc cccaggcgcg 900 tttacccggt ttcattttca gttgaggcca aaatccccgc gggttggtcg gggcggggcg 960 gggctcgggg ggacggggct gaccgcgggg cctgggccag ggtctcacac cctccagagg 1020 atgtttggct gcgacgtggg gccggacggg cgcctcctcc gcgggtacca ccaggacgcc 1080 tacgacggca aggattacat cgccctgaac gaggacctga gctcctggac cgccgcggac 1140 acggcggctc agatcaccca gcgcaagtgg gaggcggccc gtgtggcgga gcagctgaga 1200 gcctacctgg agggcgagtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag 1260 acgctgcagc gcgcgggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc 1320 cggggatggc ctcccacgag aagaggagga aaatgggatc agcgctagaa tgtcgccctc 1380 ccttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc 1440 taggacaatt aagggatgac gtctctgagg aaatggaggg gaagacagtc cctagaatac 1500 tgatcagggg tcccctttga cccctgcagc agccttggga accgtgactt ttcctctcag 1560 gccttgttct ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc 1620 actttacctc cacttagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact 1680 ttccaatgaa taggagatta tcccaggtgc ctgcgtccag gctggtgtct gggttctgtg 1740 ccccttcccc accccaggtg tcctgtccat tctcaggctg gtcacatggg tggtcctagg 1800 gtgtcccatg agagatgcaa agcgcctgaa ttttctgact cttcccatca gaccccccaa 1860 agacacacgt gacccaccac cccatctctg accatgaggc caccctgagg tgctgggccc 1920 tgggcttcta ccctgcggag atcacactga cctggcagcg ggatggcgag gaccaaactc 1980 aggacactga gcttgtggag accagaccag caggagatag aaccttccag aagtgggcag 2040 ctgtggtggt gccttctgga gaagagcaga gatacacatg ccatgtacag catgaggggc 2100 tgccgaagcc cctcaccctg agatggggta aggaggggga tgaggggtca tatctcttct 2160 cagggaaagc aggagccctt cagcagggtc agggcccctc atcttccctt cctttcccag 2220 agccgtcttc ccagtccacc gtccccatcg tgggcattgt tgctggcctg gctgtcctag 2280 cagttgtggt catcggagct gtggtcgctg ctgtggtgtg taggaggaag agctcaggta 2340 gggaaggggt gaggggtggg gtctgagttt tcttgtccca ctgggggttt caagccccag 2400 gtagaagtgt tccctgcctc attactggga agcagcatcc acacaggggc taacgcagcc 2460 tgggaccctg tgtgccagca cttactcttt tgtgcagcac atgtgacaat gaaggacgga 2520 tgtatcacct tggtggttgt ggtgttgggg tcctgattcc agcattcatg agtcagggga 2580 aggtccctgc taaggacaga ccttaggagg gcagttggtc caggacccac acttgctttc 2640 ctcgtgtttc ctgatcctgc cttgggtctg tagtcatact tctggaaatt ccttttgggt 2700 ccaagacgag gaggttcctc taagatctca tggccctgct tcctcccagt cccctcacag 2760 ggcattttct tcccacaggt ggaaaaggag ggagctactc tcaggctgcg tgtaagtgat 2820 gggggtggga gtgtggagga gctcacccac cccctaattc ctcctgtccc acgtctcctg 2880 cgggctctga ccaggtcctg tttttgttct actccaggca gcgacagtgc ccagggctct 2940 gatgtgtctc tcacagcttg aaaaggtgag attcttgggg tctagagtgg gtggggtggc 3000 aggtctgggg gtgggtgggg cagtggggaa aggcctgggt aatggagatt ctttgattgg 3060 gatgtttcgc gtgtgtggtg ggctgtttag actgtcatca cttaccatga ctaaccagaa 3120 tttgttcatg actgttgttt tctgtagcct gagacagctg tcttgtgagg gactgagatg 3180 caggatttct tcacgcctcc cctttgtgac ttcaagagcc tctggcatct ctttctgcaa 3240 aggcacctga atgtgtctgc gtccctgtta gcataatgtg aggaggtgga gagaccagcc 3300 cacccccgtg tccactgtga cccct 3325 // ID LN877334; SV 2; linear; genomic DNA; STD; HUM; 3336 BP. XX AC LN877334; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*15:11:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3336 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; c3971913c6e6b41e2f1bbb56026c60b0. DR IMGT/HLA; HLA-B*15:11:01; HLA00174. XX FH Key Location/Qualifiers FH FT source 1..3336 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="TER-1327" FT /db_xref="taxon:9606" FT CDS join(285..357,487..756,1002..1277,1853..2128,2233..2349, FT 2791..2823,2930..2973) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*15:11:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:D5L9K0" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:D5L9K0" FT /protein_id="CUA55077.1" FT /translation="MRVTAPRTVLLLLSGALALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDRNTQIYKTNTQTYRESLRN FT LRGYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAAREAEQWRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*15:11:01" FT /number=1 FT intron 358..486 FT /gene="HLA-B" FT /allele="HLA-B*15:11:01" FT /number=1 FT exon 487..756 FT /gene="HLA-B" FT /allele="HLA-B*15:11:01" FT /number=2 FT intron 757..1001 FT /gene="HLA-B" FT /allele="HLA-B*15:11:01" FT /number=2 FT exon 1002..1277 FT /gene="HLA-B" FT /allele="HLA-B*15:11:01" FT /number=3 FT intron 1278..1852 FT /gene="HLA-B" FT /allele="HLA-B*15:11:01" FT /number=3 FT exon 1853..2128 FT /gene="HLA-B" FT /allele="HLA-B*15:11:01" FT /number=4 FT intron 2129..2232 FT /gene="HLA-B" FT /allele="HLA-B*15:11:01" FT /number=4 FT exon 2233..2349 FT /gene="HLA-B" FT /allele="HLA-B*15:11:01" FT /number=5 FT intron 2350..2790 FT /gene="HLA-B" FT /allele="HLA-B*15:11:01" FT /number=5 FT exon 2791..2823 FT /gene="HLA-B" FT /allele="HLA-B*15:11:01" FT /number=6 FT intron 2824..2929 FT /gene="HLA-B" FT /allele="HLA-B*15:11:01" FT /number=6 FT exon 2930..>2973 FT /gene="HLA-B" FT /allele="HLA-B*15:11:01" FT /number=7 XX SQ Sequence 3336 BP; 617 A; 973 C; 1047 G; 699 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagagcct 60 tgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcaaaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccgt cctcctgctg ctctcgggag ccctggccct gaccgagacc tgggccggtg 360 agtgcggggt cggcagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg 420 gcgcaggacc cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg 540 agccccgctt catcgcagtg ggctacgtgg acgacaccca gttcgtgagg ttcgacagcg 600 acgccgcgag tccgaggatg gcgccccggg cgccatggat agagcaggag gggccggagt 660 attgggaccg gaacacacag atctacaaga ccaacacaca gacttaccga gagagcctgc 720 ggaacctgcg cggctactac aaccagagcg aggccggtga gtgaccccgg cctggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgccccc ctgaggccgc gggacccgcc caaaccctcg accggcgaga gccccaggcg 900 cgtttacccg gtttcatttt cagttgaggc caaaatcccc gcgggttggt cggggcgggg 960 cggggctcgg gggacggggc tgaccgcggg gcctgggcca gggtctcaca ccctccagag 1020 gatgtacggc tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcatg accagtccgc 1080 ctacgacggc aaggattaca tcgccctgaa cgaggacctg agctcctgga ccgcggcgga 1140 cacggcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgaggcgg agcagtggag 1200 agcctacctg gagggcctgt gcgtggagtg gctccgcaga tacctggaga acgggaagga 1260 gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320 ccggggatgg cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct 1380 cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440 ctaggacaat taagggatga cgtctctgag gaaatggagg ggaagacagt ccctaggata 1500 gtgatcaggg gtcccctttg acccctgcag cagccttggg aaccgtgact tttcctctca 1560 ggccttgttc tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt 1620 cactttacct ccactcagat caggagcaga agtccctgtt ccccgctcag agactcgaac 1680 tttccaatga ataggagatt atcccaggtg cctgcgtcca ggctggtgtc tgggttctgt 1740 gccccttccc caccccaggt gtcctgtcca ttctcaggct ggtcacatgg gtggtcctag 1800 ggtgtcccat gagagatgca aagcgcctga attttctgac tcttcccatc agacccccca 1860 aagacacatg tgacccacca ccccatctct gaccatgagg ccaccctgag gtgctgggcc 1920 ctgggcttct accctgcgga gatcacactg acctggcagc gggatggcga ggaccaaact 1980 caggacaccg agcttgtgga gaccagacca gcaggagata gaaccttcca gaagtgggca 2040 gctgtggtgg tgccttctgg agaagagcag agatacacat gccatgtaca gcatgagggg 2100 ctgccgaagc ccctcaccct gagatggggt aaggaggggg atgaggggtc atatctgttc 2160 tcagggaaag caggagccct tctggagccc ttcagcaggg tcagggcccc tcatcttccc 2220 ctcctttccc agagccatct tcccagtcca ccatccccat cgtgggcatt gttgctggcc 2280 tggctgtcct agcagttgtg gtcatcggag ctgtggtcgc tactgtgatg tgtaggagga 2340 agagctcagg tagggaaggg gtgaggggtg gggtctgggt tttcttgtcc cactgggggt 2400 ttcaagcccc aggtagaagt gttccctgcc tcattactgg gaagcagcat ccacacaggg 2460 gctaacgcag cctgggaccc tgtgtgccag cacttactct tttgtgcagc acatgtgaca 2520 atgaaggaca gatgtatcgc cttgatggtt gtggtgttgg ggtcctgatt ccagcattca 2580 tgagtcaggg gaaggtccct gctaaggaca gaccttagga gggcagttgg tccaggaccc 2640 acacttgctt tcctcgtgtt tcctgatcct gccctgggtc tgtagtcata cttctggaaa 2700 ttccttttgg ttccaagacg aggaggttcc tctaagatct catggtcctg cttcctccca 2760 gtcccctcac aggacatttt cttcccacag gtggaaaagg agggagctac tctcaggctg 2820 cgtgtaagtg gtgggggtgg gagtgtggag gagctcaccc accccataat tcctcctgtc 2880 ccacgtctcc tgcgggctct gaccaggtcc tgtttttgtt ctactccagc cagcgacagt 2940 gcccagggct ctgatgtgtc tctcacagct tgaaaaggtg agattcttgg ggtctagagt 3000 gggtggggtg gcgggtctgg gggtgggtgg ggcagtgggg aaaggcctgg gtaatggaga 3060 ttctttgatt gggatgtttc gcgtgtgtcg tgggctgttc agagtgtcat cacttaccat 3120 gactaaccag aatttgttca tgactgttgt tttctgtagc ctgagacagc tgtcttgtga 3180 gggaccgaga tgcaggattt cttcacgcct cccctttgtg acttcaagag cctctggcat 3240 ctctttctgc aaaggcacct gaatgtgtct gcgtccctgt tagcataatg tgaggaggtg 3300 gagagacagc ccacccttgt gtccactgtg acccct 3336 // ID LN877335; SV 2; linear; genomic DNA; STD; HUM; 3332 BP. XX AC LN877335; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*59:01:01:02 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3332 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; c4602c638fb61927261e08d529f2898f. DR IMGT/HLA; HLA-B*59:01:01:02; HLA06075. XX FH Key Location/Qualifiers FH FT source 1..3332 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="TER-1327" FT /db_xref="taxon:9606" FT CDS join(285..357,486..755,1001..1276,1852..2127,2232..2348, FT 2790..2822,2929..2972) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*59:01:01:02" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:C6K6I9" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:C6K6I9" FT /protein_id="CUA55078.1" FT /translation="MRVTAPRTLLLLLWGALALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRENLRI FT ALRYYNQSEAGSHTWQTMYGCDLGPDGRLLRGHNQLAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGTCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*59:01:01:02" FT /number=1 FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*59:01:01:02" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*59:01:01:02" FT /number=2 FT intron 756..1000 FT /gene="HLA-B" FT /allele="HLA-B*59:01:01:02" FT /number=2 FT exon 1001..1276 FT /gene="HLA-B" FT /allele="HLA-B*59:01:01:02" FT /number=3 FT intron 1277..1851 FT /gene="HLA-B" FT /allele="HLA-B*59:01:01:02" FT /number=3 FT exon 1852..2127 FT /gene="HLA-B" FT /allele="HLA-B*59:01:01:02" FT /number=4 FT intron 2128..2231 FT /gene="HLA-B" FT /allele="HLA-B*59:01:01:02" FT /number=4 FT exon 2232..2348 FT /gene="HLA-B" FT /allele="HLA-B*59:01:01:02" FT /number=5 FT intron 2349..2789 FT /gene="HLA-B" FT /allele="HLA-B*59:01:01:02" FT /number=5 FT exon 2790..2822 FT /gene="HLA-B" FT /allele="HLA-B*59:01:01:02" FT /number=6 FT intron 2823..2928 FT /gene="HLA-B" FT /allele="HLA-B*59:01:01:02" FT /number=6 FT exon 2929..>2972 FT /gene="HLA-B" FT /allele="HLA-B*59:01:01:02" FT /number=7 XX SQ Sequence 3332 BP; 619 A; 965 C; 1048 G; 700 T; 0 other; gatcaggacg aagtcccatg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagagtct cctcagacac cgagatgcgg gtcacggcac 300 cccgaaccct cctcctgctg ctctgggggg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc gggagggaaa tggcctctgt ggggaggagc gaggggaccg caggcggggg 420 cgcaggaccc ggggagccgc gccgggagga gggtctggcg ggtctcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcta caccgccatg tcccggcccg gccgcgggga 540 gccccgcttc atcgcagtgg gctacgtgga cgacacgcag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggagta 660 ttgggaccgg aacacacaga tcttcaagac caacacacag acttaccgag agaacctgcg 720 gatcgcgctc cgctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg ggacggggct gaccgcgggg ccggggccag ggtctcacac ttggcagacg 1020 atgtatggct gcgacctggg gccggacggg cgcctcctcc gcgggcataa ccagttagcc 1080 tacgacggca aggattacat cgccctgaac gaggacctga gctcctggac cgcggcggac 1140 accgcggctc agatcaccca gcgcaagtgg gaggcggccc gtgtggcgga gcagctgaga 1200 gcctacctgg agggcacgtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag 1260 acgctgcagc gcgcgggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc 1320 cggggatggc ctcccacgag aagaggagga aaatgggatc agcgctagaa tgtcgccctc 1380 ccttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc 1440 taggacaatt aagggatgac gtctctgagg aaatggaggg gaagacagtc cctagaatac 1500 tgatcagggg tcctctttga cccctgcagc agccttggga accgtgactt ttcctctcag 1560 gccttgttct ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc 1620 actttacctc cactcagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact 1680 ttccaatgaa taggagatta tcccaggtgc ctgcgtccag gctggtgtct gggttctgtg 1740 ccccttcccc accccaggtg tcctgtccat tctcaggctg gtcacatggg tggtcctagg 1800 gtgtcctatg agagatgcaa agcgcctgaa ttttctgact cttcccatca gaccccccaa 1860 agacacacgt gacccaccac cccatctctg accatgaggc caccctgagg tgctgggccc 1920 tgggcttcta ccctgcggag atcacactga cctggcagcg ggatggcgag gaccaaactc 1980 aggacactga gcttgtggag accagaccag caggagatag aaccttccag aagtgggcag 2040 ctgtggtggt gccttctgga gaagagcaga gatacacatg ccatgtacag catgaggggc 2100 tgccgaagcc cctcaccctg agatggggta aggaggggga tgaggggtca tatctcttct 2160 cagggaaagc aggagccctt ctggagccct tcagcagggt cagggcccct cgtcttcccc 2220 tcctttccca gagccatctt cccagtccac catccccatc gtgggcattg ttgctggcct 2280 ggctgtccta gcagttgtgg tcatcggagc tgtggtcgct actgtgatgt gtaggaggaa 2340 gagctcaggt agggaagggg tgaggggtgg ggtctgggtt ttcttgtccc actgggggtt 2400 tcaagcccca ggtagaagtg ttccctgcct cattactggg aagcagcatc cacacagggg 2460 ctaatgcagc ctgggaccct gtgtgccagc acttactctt ttgtgcagca catgtgacaa 2520 tgaaggacgg atgtatcacc ttgatggttg tggtgttggg gtcctgattt cagcattcat 2580 gagtcagggg aaggtccctg ctaaggacag accttaggag ggcagttggt ccaggaccca 2640 cacttgcttt cctcgtgttt cctgatcctg ccttgggtct gtagtcatac ttctggaaat 2700 tccttttggg tccaagacga ggaggttcct ctaagatctc atggccctgc ttcctcccag 2760 tcccctcaca ggacattttc ttcccacagg tggaaaagga gggagctact ctcaggctgc 2820 gtgtaagtgg tgggggtggg agtgtggagg agctcaccca ccccataatt cctcctgtcc 2880 cacgtctcct gcgggctctg accaggtcct gtttttgttc tactccagcc agcgacagtg 2940 cccagggctc tgatgtgtct ctcacagctt gaaaaggtga gattcttggg gtctagagtg 3000 ggcggggggg ggtggggtgg ggagggggca gaggggaaag gcctgggtaa tggagattct 3060 ttgattggga tgttacgcgt gtgtggtggg ctgtttagag tgtcatcact taccatgact 3120 aaccagaatt tgttcatgac tgttgttttc tgtagcctga gacagctgtc ttgtgaggga 3180 ctgagatgca ggatttcttc actcctcccc tttgtgactt caagagcctc tggcatctct 3240 ttctgcaaag gcacctgaat gtgtctgcgt ccctgttagc ataatgtgag gaggtggaga 3300 gacagcccac ccccgtgtcc actgtgaccc ct 3332 // ID LN877336; SV 2; linear; genomic DNA; STD; HUM; 3314 BP. XX AC LN877336; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-A gene for MHC class I antigen, allele HLA-A*02:02:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3314 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; ee7f1a669f44fe51103d820e9be4e4d5. DR IMGT/HLA; HLA-A*02:02:01:01; HLA00007. XX FH Key Location/Qualifiers FH FT source 1..3314 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300120" FT /db_xref="taxon:9606" FT CDS join(301..373,504..773,1015..1290,1891..2166,2266..2382, FT 2821..2853,2996..3043,3213..3217) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-A" FT /allele="HLA-A*02:02:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:I3ZN76" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:I3ZN76" FT /protein_id="CUA55079.1" FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASRRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGT FT LRGYYNQSEAGSHTLQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMA FT AQTTKHKWEAAHVAEQWRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRK FT GGSYSQAASSDSAQGSDVSLTACKV" FT exon <301..373 FT /gene="HLA-A" FT /allele="HLA-A*02:02:01" FT /number=1 FT intron 374..503 FT /gene="HLA-A" FT /allele="HLA-A*02:02:01" FT /number=1 FT exon 504..773 FT /gene="HLA-A" FT /allele="HLA-A*02:02:01" FT /number=2 FT intron 774..1014 FT /gene="HLA-A" FT /allele="HLA-A*02:02:01" FT /number=2 FT exon 1015..1290 FT /gene="HLA-A" FT /allele="HLA-A*02:02:01" FT /number=3 FT intron 1291..1890 FT /gene="HLA-A" FT /allele="HLA-A*02:02:01" FT /number=3 FT exon 1891..2166 FT /gene="HLA-A" FT /allele="HLA-A*02:02:01" FT /number=4 FT intron 2167..2265 FT /gene="HLA-A" FT /allele="HLA-A*02:02:01" FT /number=4 FT exon 2266..2382 FT /gene="HLA-A" FT /allele="HLA-A*02:02:01" FT /number=5 FT intron 2383..2820 FT /gene="HLA-A" FT /allele="HLA-A*02:02:01" FT /number=5 FT exon 2821..2853 FT /gene="HLA-A" FT /allele="HLA-A*02:02:01" FT /number=6 FT intron 2854..2995 FT /gene="HLA-A" FT /allele="HLA-A*02:02:01" FT /number=6 FT exon 2996..3043 FT /gene="HLA-A" FT /allele="HLA-A*02:02:01" FT /number=7 FT intron 3044..3212 FT /gene="HLA-A" FT /allele="HLA-A*02:02:01" FT /number=7 FT exon 3213..>3217 FT /gene="HLA-A" FT /allele="HLA-A*02:02:01" FT /number=8 XX SQ Sequence 3314 BP; 638 A; 952 C; 1022 G; 702 T; 0 other; cagaagcaga ggggtcaggg cgaagtccca gggccccagg cgtggctctc agggtctcag 60 gccccgaagg cggtgtatgg attggggagt cccagccttg gggattcccc aactccgcag 120 tttcttttct ccctctccca acctatgtag ggtccttctt cctggatact cacgacgcgg 180 acccagttct cactcccatt gggtgtcggg tttccagaga agccaatcag tgtcgtcgcg 240 gtcgcggttc taaagtccgc acgcacccac cgggactcag attctcccca gacgccgagg 300 atggccgtca tggcgccccg aaccctcgtc ctgctactct cgggggctct ggccctgacc 360 cagacctggg cgggtgagtg cggggtcggg agggaaacgg cctctgtggg gagaagcaac 420 gggcccgcct ggcgggggcg caggacccgg gaagccgcgc cgggaggagg gtcgggcggg 480 tctcagccac tcctcgtccc caggctctca ctccatgagg tatttcttca catccgtgtc 540 ccggcccggc cgcggggagc cccgcttcat cgcagtgggc tacgtggacg acacgcagtt 600 cgtgcggttc gacagcgacg ccgcgagccg gaggatggag ccgcgggcgc cgtggataga 660 gcaggagggt ccggagtatt gggacgggga gacacggaaa gtgaaggccc actcacagac 720 tcaccgagtg gacctgggga ccctgcgcgg ctactacaac cagagcgagg ccggtgagtg 780 accccggccc ggggcgcagg tcacgacctc tcatccccca cggacgggcc aggtcgccca 840 cagtctccgg gtccgagatc cgccccgaag ccgcgggacc ccgagaccct tgccccggga 900 gaggcccagg cgcctttacc cggtttcatt ttcagtttag gccaaaaatc cccccaggtt 960 ggtcggggcg gggcggggct cgggggaccg ggctgaccgc ggggtccggg ccaggttctc 1020 acaccctcca gaggatgtat ggctgcgacg tggggtcgga ctggcgcttc ctgcgcgggt 1080 accaccagta cgcctacgac ggcaaggatt acatcgccct gaaagaggac ctgcgctctt 1140 ggaccgcggc ggacatggca gctcagacca ccaagcacaa gtgggaggcg gcccatgtgg 1200 cggagcagtg gagagcctac ctggagggca cgtgcgtgga gtggctccgc agatacctgg 1260 agaacgggaa ggagacgctg cagcgcacgg gtaccagggg ccacggggcg cctccctgat 1320 cgcctgtaga tctcccgggc tggcctccca caaggagggg agacaattgg gaccaacact 1380 agaatatcgc cctccctctg gtcctgaggg agaggaatcc tcctgggttt ccagatcctg 1440 taccagagag tgactctgag gttccgccct gctctctgac acaattaagg gataaaatct 1500 ctgaaggaat gacgggaaga cgatccctcg aatactgatg agtggttccc tttgacacac 1560 acaggcagca gccttgggcc cgtgactttt cctctcaggc cttgttctct gcttcacact 1620 caatgtgtgt gggggtctga gtccagcact tctgagtccc tcagcctcca ctcaggtcag 1680 gaccagaagt cgctgttccc tcttcaggga ctagaatttt ccacggaata ggagattatc 1740 ccaggtgcct gtgtccaggc tggtgtctgg gttctgtgct cccttcccca tcccaggtgt 1800 cctgtccatt ctcaagatag ccacatgtgt gctggaggag tgtcccatga cagatgcaaa 1860 atgcctgaat gatctgactc ttcctgacag acgcccccaa aacgcatatg actcaccacg 1920 ctgtctctga ccatgaagcc accctgaggt gctgggccct gagcttctac cctgcggaga 1980 tcacactgac ctggcagcgg gatggggagg accagaccca ggacacggag ctcgtggaga 2040 ccaggcctgc aggggatgga accttccaga agtgggcggc tgtggtggtg ccttctggac 2100 aggagcagag atacacctgc catgtgcagc atgagggttt gcccaagccc ctcaccctga 2160 gatggggtaa ggagggagac gggggtgtca tgtcttttag ggaaagcagg agcctctctg 2220 acctttagca gggtcagggc ccctcacctt cccctctttt cccagagccg tcttcccagc 2280 ccaccatccc catcgtgggc atcattgctg gcctggttct ctttggagct gtgatcactg 2340 gagctgtggt cgctgctgtg atgtggagga ggaagagctc aggtggggaa ggggtgaagg 2400 gtgggtctga gatttcttgt ctcactgagg gttccaagac ccaggtagaa gtgtgccctg 2460 cctcgttact gggaagcacc acccacaatt atgggcctac ccagcctggg ccctgtgtgc 2520 cagcacttac tcttttgtaa agcacctgtt aaaatgaagg acagatttat caccttgatt 2580 acagcggtga tgggacctga tcccagcagt cacaagtcac aggggaaggt ccctgaggac 2640 cttcaggagg gcggttggtc caggacccac acctgctttc ttcatgtttc ctgatcccgc 2700 cctgggtctg cagtcacaca tttctggaaa cttctctgag gtccaagact tggaggttcc 2760 tctaggacct taaggccctg actcctttct ggtatctcac aggacatttt cttcccacag 2820 atagaaaagg agggagctac tctcaggctg caagtaagta tgaaggaggc tgatgcctga 2880 ggtccttggg atattgtgtt tgggagccca tgggggagct cacccacccc acaattcctc 2940 ctctagccac atcttctgtg ggatctgacc aggttctgtt tttgttctac cccaggcagt 3000 gacagtgccc agggctctga tgtgtctctc acagcttgta aaggtgagag cctggagggc 3060 ctgatgtgtg ttgggtgttg ggcggaacag tggacacagc tgtgctatgg ggtttctttc 3120 cattggatgt attgagcatg cgatgggctg tttaaagtgt gacccctcac tgtgacagat 3180 acgaatttgt tcatgaatat ttttttctat agtgtgagac agctgccttg tgtgggactg 3240 agaggcaaga gttgttcctg cccttccctt tgtgacttga agaaccctga ctttgtttct 3300 gcaaaggcac ctgc 3314 // ID LN877338; SV 2; linear; genomic DNA; STD; HUM; 3368 BP. XX AC LN877338; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*17:01:01new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3368 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 7fd20e64b091502ebfff451c4b1340c3. DR IMGT/HLA; HLA-C*17:01:01:04; HLA14089. XX FH Key Location/Qualifiers FH FT source 1..3368 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300120" FT /db_xref="taxon:9606" FT CDS join(283..355,486..755,1002..1277,1865..2140,2265..2402, FT 2841..2873,2981..3028,3193..3197) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*17:01:01new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:C9E8W1" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:C9E8W1" FT /protein_id="CUA55081.1" FT /translation="MRVMAPQALLLLLSGALALIETWAGSHSMRYFYTAVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVNLRK FT LRGYYNQSEAGSHTIQRMYGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTA FT AQISQRKLEAAREAEQLRAYLEGECVEWLRGYLENGKETLQRAERPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY FT TCHVQHEGLQEPCTLRWKPSSQPTIPNLGIVSGPAVLAVLAVLAVLAVLGAVVAAVIHR FT RKSSGGKGGSCSQAASSNSAQGSDESLIACKA" FT exon <283..355 FT /gene="HLA-C" FT /allele="HLA-C*17:01:01new" FT /number=1 FT intron 356..485 FT /gene="HLA-C" FT /allele="HLA-C*17:01:01new" FT /number=1 FT exon 486..755 FT /gene="HLA-C" FT /allele="HLA-C*17:01:01new" FT /number=2 FT intron 756..1001 FT /gene="HLA-C" FT /allele="HLA-C*17:01:01new" FT /number=2 FT exon 1002..1277 FT /gene="HLA-C" FT /allele="HLA-C*17:01:01new" FT /number=3 FT intron 1278..1864 FT /gene="HLA-C" FT /allele="HLA-C*17:01:01new" FT /number=3 FT exon 1865..2140 FT /gene="HLA-C" FT /allele="HLA-C*17:01:01new" FT /number=4 FT intron 2141..2264 FT /gene="HLA-C" FT /allele="HLA-C*17:01:01new" FT /number=4 FT exon 2265..2402 FT /gene="HLA-C" FT /allele="HLA-C*17:01:01new" FT /number=5 FT intron 2403..2840 FT /gene="HLA-C" FT /allele="HLA-C*17:01:01new" FT /number=5 FT exon 2841..2873 FT /gene="HLA-C" FT /allele="HLA-C*17:01:01new" FT /number=6 FT intron 2874..2980 FT /gene="HLA-C" FT /allele="HLA-C*17:01:01new" FT /number=6 FT exon 2981..3028 FT /gene="HLA-C" FT /allele="HLA-C*17:01:01new" FT /number=7 FT intron 3029..3192 FT /gene="HLA-C" FT /allele="HLA-C*17:01:01new" FT /number=7 FT exon 3193..>3197 FT /gene="HLA-C" FT /allele="HLA-C*17:01:01new" FT /number=8 XX SQ Sequence 3368 BP; 622 A; 992 C; 1050 G; 704 T; 0 other; gatcaggacg aagtcccagg tcccgggcgg ggctctctgg gtctcaagct cccagggccg 60 tgtctgcatt ggggaggcgc agcgttgggg attccccact cccactcccc tgagtttcac 120 ttcttctccc aacctgcgtc gggtccttct tcctgaatac tcatgacgcg tccccaattc 180 ccactcccat tgggtgtcgg gttctagaga agccaatcag cgtctacgca gtcccggttc 240 tgaagtcacc cacccggact cagattctcc ccagacgccg agatgcgggt catggcgccc 300 caagccctcc tcctgctgct ctcgggagcc ctggccctga tcgagacctg ggccggtgag 360 tgcggggttg ggagggaaac ggcctctgcg gagaggagcg aggggcccgc ccggcgaggg 420 cgcaggaccc ggggagccgc gcagggagga gggtcgggcg ggtctcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcta caccgccgtg tcccggcccg gccgcggaga 540 gccccgcttc atcgcagtgg gctacgtgga cgacacgcag ttcgtgcggt tcgacagcga 600 cgccgcgagt ccgagagggg agccgcgggc gccgtgggtg gagcaggagg ggccggagta 660 ttgggaccgg gagacacaga agtacaagcg ccaggcacag gctgaccgag tgaacctgcg 720 gaaactgcgc ggctactaca accagagcga ggccggtgag tgaccccagc ccggggcgca 780 ggtcacgacc cctccccatc ccccacggac ggcccgggtc gccccgagtc tcccggtctg 840 agatcctccc cgaggctgcg gaacccgccc agaccctcga ccggagagag ccctagtcgc 900 ctttacccgg tttcattttc agtttaggcc aaaatccccg cgggttggtc ggggctgggg 960 cggggctcgg gggacggggc tgaccacggg ggcggggcca ggttctcaca ccatccagag 1020 gatgtatggc tgcgacctgg ggcccgacgg gcgcctcctc cgcgggtata accagttcgc 1080 ctacgacggc aaggattaca tcgccctgaa cgaggacctg cgctcctgga ccgcggcgga 1140 cacggcggct cagatctccc agcgcaagtt ggaggcggcc cgtgaggcgg agcagctgag 1200 agcctacctg gagggcgagt gcgtggagtg gctccgcgga tacctggaga acgggaagga 1260 gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctatagatct 1320 cccgggatgg cctcccacga ggaggggagg aaaatgggat cagcgctaga atatcgccct 1380 cccttgaatg gagaatggga tgagttttcc cgagtttcct ctgagggccc cgtctgctct 1440 ctaggacaat taagggatga agtccctgag gaaatggagg ggaagacagt ccctggaata 1500 ctgatcaggg gtcccctttg accactttga ccactgcggc agctgtggtc aggctgctga 1560 cctttctctc aggccttgtt ctctgcctca cactcaatgt gtctgaaggt ttgattccag 1620 cttttctgag tccttcggcc tccactcagg tcaggaccag aagtcgctgt tcctccctca 1680 gagactagaa ctttccaaag aataggagat tatcccaggt ccctgtgtcc aggctggcgt 1740 ctgggttctg tgcccccttc cctaccccag gtgtcctgtc cattctcagg atggtcacat 1800 gggcgctgct ggagtgtcgc aagagagata caaagtgtct gaattttctg actcttcccg 1860 tcagaacgcc caaagacaca cgtgacccac catcccgtct ctgaccatga ggccaccctg 1920 aggtgctggg ccctgggctt ctaccctgcg gagatcacac tgacctggca gcgggatggg 1980 gaggaccaaa ctcaggacac cgagcttgtg gagaccaggc cagcaggaga tggaaccttc 2040 cagaagtggg cagctgtggt ggtgccttct ggacaagaac agagatacac gtgccatgtg 2100 cagcacgagg ggctgcagga gccctgcacc ctgagatgga gtaaggaggg ggatgagggg 2160 tcatgtgtct tctcagggaa agcagaagtc cttctggagc ccttcagccg ggtcagggct 2220 gaggcttggg tgtaagggcc cctcaccttc ccctcctttc ccagagccgt cttcccagcc 2280 caccatcccc aacttgggca tcgtttctgg cccagctgtc ctggctgtcc tggctgtcct 2340 ggctgtccta gctgtcctag gagctgtggt cgctgctgtg atacatagga ggaagagctc 2400 aggtagggaa ggggtgagga gtggggtctg ggttttcttg tcccactggg agtttcaagc 2460 cccaggtaga agtgtgcccc acctcgttac tggaagcacc atccacacct gggccatccc 2520 agcctgggac cctgtgtgcc agcacttact ctgttgtgaa gcacatgaca acgaaggaca 2580 gatgtatcac cttgatgatt atggtgttgg ggtcctgatt ccagcattcg tgagtcaggg 2640 gaaggtccct gctaaggaca gaccttagga gggcagttgc tccagaaccc acagctgctt 2700 tccccgtgtt tcctgatcct gccctgggtc tgcagtcata gttctggaaa cttctcttgg 2760 gtccaagact aggaggttcc cctaagatcg catggccctg cctcctccct gtcccctcac 2820 agggcatttt cttcccacag gtggaaaagg agggagctgc tctcaggctg cgtgtaagtg 2880 atggcggtgg gcgtgtggag gagctcacct accccataat tcctcttgtc ccacatctcc 2940 tgcgggctct gaccaggtct ttttttttgt tctaccccag ccagcaacag tgcccagggc 3000 tctgatgagt ctctcatcgc ttgtaaaggt gagattctgg ggagctgaag tggtcggggg 3060 tggggcagag ggaaaaggcc tgggtaatgg ggatcctttg attgggacgt ttcgagtgtg 3120 tggtggactg ttcagagtgt catcacttac catgactgac ctgaatttgt tcatgactat 3180 tgtgttctgt agcctgagac agctgcctgt gtgggactga gatgcaggat ttcttcacac 3240 ctctcctttg tgacttcaag agcctctggc atctctttct gcaaaggcat ctgaatgtgt 3300 ctgcgttcct gttagcataa tgtgaggagg tggagagaca gcccaccccc gtgtccaccg 3360 tgacccct 3368 // ID LN877339; SV 2; linear; genomic DNA; STD; HUM; 3312 BP. XX AC LN877339; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*39:10:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3312 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 426c9efacbfab537609b3537d7f038f1. DR IMGT/HLA; HLA-B*39:10:01; HLA00284. XX FH Key Location/Qualifiers FH FT source 1..3312 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300120" FT /db_xref="taxon:9606" FT CDS join(285..357,486..755,1002..1277,1850..2125,2219..2335, FT 2777..2809,2916..2959) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*39:10:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A173AD95" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A173AD95" FT /protein_id="CUA55082.1" FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKTNTQTDRESLRN FT LRGYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHNQFAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRTYLEGTCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*39:10:01" FT /number=1 FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*39:10:01" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*39:10:01" FT /number=2 FT intron 756..1001 FT /gene="HLA-B" FT /allele="HLA-B*39:10:01" FT /number=2 FT exon 1002..1277 FT /gene="HLA-B" FT /allele="HLA-B*39:10:01" FT /number=3 FT intron 1278..1849 FT /gene="HLA-B" FT /allele="HLA-B*39:10:01" FT /number=3 FT exon 1850..2125 FT /gene="HLA-B" FT /allele="HLA-B*39:10:01" FT /number=4 FT intron 2126..2218 FT /gene="HLA-B" FT /allele="HLA-B*39:10:01" FT /number=4 FT exon 2219..2335 FT /gene="HLA-B" FT /allele="HLA-B*39:10:01" FT /number=5 FT intron 2336..2776 FT /gene="HLA-B" FT /allele="HLA-B*39:10:01" FT /number=5 FT exon 2777..2809 FT /gene="HLA-B" FT /allele="HLA-B*39:10:01" FT /number=6 FT intron 2810..2915 FT /gene="HLA-B" FT /allele="HLA-B*39:10:01" FT /number=6 FT exon 2916..>2959 FT /gene="HLA-B" FT /allele="HLA-B*39:10:01" FT /number=7 XX SQ Sequence 3312 BP; 621 A; 965 C; 1036 G; 690 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccctgagtt tcacttcttc 120 tcccaacttg tgtcgggtcc ttcttccagg atactcgtga cgcatcccca cttcccactc 180 ccattgggtg tcggatatct agagaagcca atcagcgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagagtct cctcagacgc cgagatgctg gtcatggcgc 300 cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc gggagggaaa tggcctctgc cgggaggagc gaggggaccg caggcggggg 420 cgcaggacct gaggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcta cacctccgtg tcccggcccg gccgcgggga 540 gccccgcttc atctcagtgg gctacgtgga cgacacgcag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggagta 660 ttgggaccgg aacacacaga tctacaagac caacacacag actgaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg gggacggggc tgaccgcggg gccggggcca gggtctcaca ccctccagag 1020 gatgtacggc tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcata accagttcgc 1080 ctacgacggc aaggattaca tcgccctgaa cgaggacctg agctcctgga ccgcggcgga 1140 caccgcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcagctgag 1200 aacctacctg gagggcacgt gcgtggagtg gctccgcaga tacctggaga acgggaagga 1260 gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320 ccggggatgg cctccaacga gaagaagagg aaaatgggat cagcgctaga atgtcgccct 1380 cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440 ctaggacaat taagggatga cgtctctgag gaaatggagg ggaagacagt ccctagaata 1500 ctgatcaggg gtcccctttg acccctgcag cagccttggg aaccatgact tttcctctca 1560 ggccttgttc tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt 1620 cactttacct ccactcagat caggagcaga agtctctgtt ccccgctcag agactcgaac 1680 tttccaatga atagattatc ccaggtgcct gcgtccaggc tggtgtctgg gttctgtgcc 1740 ccttccccac cccaggtgtc ctgtccattc tcaggctggt cacatgggtg gtcctagggt 1800 gtcccatgag agatgcaaag cgcctgaatt ttctgactct tcccatcaga ccccccaaag 1860 acacatgtga cccaccaccc catctctgac catgaggcca ccctgaggtg ctgggccctg 1920 ggcttctacc ctgcggagat cacactgacc tggcagcggg atggcgagga ccaaactcag 1980 gacaccgagc ttgtggagac cagaccagca ggagacagaa ccttccagaa gtgggcagct 2040 gtggtggtgc cttctggaga agagcagaga tacacatgcc atgtacagca tgaggggctg 2100 ccgaagcccc tcaccctgag atggggtaag gagggggatg aggggtcata tctcttctca 2160 gggaaagcag gagcccttca gcagggtcag ggcccctcat cttcccctcc tttcccagag 2220 ccatcttccc agtccaccgt ccccatcgtg ggcattgttg ctggcctggc tgtcctagca 2280 gttgtggtca tcggagctgt ggtcgctgct gtgatgtgta ggaggaagag ttcaggtagg 2340 gaaggggtga ggggtggggt ctgggttttc ttgtcccact gggggtttca agccccaggt 2400 agaagtgttc cctgcatcat tactgggaag cagcatgcac acaggggcta acgcagcctg 2460 ggaccctgtg tgccagcact tactcttttg tgcagcacat gtgacaatga aggacggatg 2520 tatcaccttg atggttgtgg tgttggggtc ctgattccag cattcatgag tcaggggaag 2580 gtccctgcta aggacagacc ttaggagggc agttggtcca ggacccacac ttgctttcct 2640 cgtgtttcct gatcctgccc tgggtctgta gtcatacttc tggaaattcc ttttgggtcc 2700 aagactagga ggttcctcta agatctcatg gccctgcttc ctcccagtcc cctcacagga 2760 cattttcttc ccacaggtgg aaaaggaggg agctactctc aggctgcgtg taagtggtgg 2820 gggtgggagt gtggaggagc tcacccaccc cataattcct cctgtcccac gtctcctgtg 2880 ggctctgacc aggtcctgtt tttgttctac tccagccagc gacagtgccc agggctctga 2940 tgtgtctctc acagcttgaa aaggtgagat tcttggggtc tagagtgggc gggggggcgg 3000 ggagggggca gaggggaaag gcctgggtaa tggagattct ttgattggga tgtttcgcgt 3060 gtgtgatggg ctgttcagag tgtcatcact taccatgact aaccagaatt tgttcatgac 3120 tgttgttttc tgtagcctga gacagctgtc ttgtgaggga ctgagatgca ggatttcttc 3180 acgcctcccc tttgtgactt caagagcctc tggcatctct ttctgcaaag gcacctgaat 3240 gtgtctgcgt ccctgttagc ataatgtgag gaggtggaga gacagcccac ccttgtgtcc 3300 actgtgaccc ct 3312 // ID LN877340; SV 2; linear; genomic DNA; STD; HUM; 3327 BP. XX AC LN877340; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*52:01:01:02 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3327 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; ff0ebc333c63692ac07e7b95c6febbd0. DR IMGT/HLA; HLA-B*52:01:01:02; HLA05917. XX FH Key Location/Qualifiers FH FT source 1..3327 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300121" FT /db_xref="taxon:9606" FT CDS join(285..357,487..756,1002..1277,1853..2128,2233..2349, FT 2791..2823,2930..2973) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q0EFB2" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q0EFB2" FT /protein_id="CUA55083.1" FT /translation="MRVTAPRTVLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRI FT ALRYYNQSEAGSHTWQTMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAAREAEQLRAYLEGLCVEWLRRHLENGKETLQRADPPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=1 FT intron 358..486 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=1 FT exon 487..756 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=2 FT intron 757..1001 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=2 FT exon 1002..1277 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=3 FT intron 1278..1852 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=3 FT exon 1853..2128 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=4 FT intron 2129..2232 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=4 FT exon 2233..2349 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=5 FT intron 2350..2790 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=5 FT exon 2791..2823 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=6 FT intron 2824..2929 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=6 FT exon 2930..>2973 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=7 XX SQ Sequence 3327 BP; 621 A; 968 C; 1043 G; 695 T; 0 other; gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagagcct 60 tgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcggatatct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccgt cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggccggtg 360 agtgcggggt cgggagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg 420 gcgcaggacc tgaggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg 540 agccccgctt catcgcagtg ggctacgtgg acgacaccca gttcgtgagg ttcgacagcg 600 acgccgcgag tccgaggacg gagccccggg cgccatggat agagcaggag gggccggagt 660 attgggaccg ggagacacag atctccaaga ccaacacaca gacttaccga gagaacctgc 720 ggatcgcgct ccgctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgcctcc ctgaggccgc gggacccgcc cagaccctcg accggcgaga gccccaggcg 900 cgtttacccg gtttcatttt cagttgaggc caaaatcccc gcgggttggt cggggcgggg 960 cggggctcgg gggacggtgc tgaccgcggg gccggggcca gggtctcaca cttggcagac 1020 gatgtatggc tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcata accagtacgc 1080 ctacgacggc aaagattaca tcgccctgaa cgaggacctg agctcctgga ccgcggcgga 1140 caccgcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgaggcgg agcagctgag 1200 agcctacctg gagggcctgt gcgtggagtg gctccgcaga cacctggaga acgggaagga 1260 gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320 ccggggatgg cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct 1380 cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440 ctaggacaat taagggatga cgtctctgag gaaatggagg ggaagacagt ccctagaata 1500 ctgatcaggg gtcccctttg acccctgcag cagccttggg aaccgtgact tttcctctca 1560 ggccttgttc tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt 1620 cactttacct ccactcagat caggagcaga agtccctgtt ccccgctcag agactcgaac 1680 tttccaatga ataggagatt atcccaggtg cctgcgtcca ggctggtgtc tgggttctgt 1740 gccccttccc cacaccaggt gtcctgtcca ttctcaggct ggtcacatgg gtggtcctag 1800 ggtgtcccat gagagatgca aagcgcctga attttctgac tcttcccatc agacccccca 1860 aagacacacg tgacccacca ccccgtctct gaccatgagg ccaccctgag gtgctgggcc 1920 ctgggcttct accctgcgga gatcacactg acctggcagc gggatggcga ggaccaaact 1980 caggacactg agcttgtgga gaccagacca gcaggagata gaaccttcca gaagtgggca 2040 gctgtggtgg tgccttctgg agaagagcag agatacacat gccatgtaca gcatgagggg 2100 ctgccgaagc ccctcaccct gagatggggt aaggaggggg atgaggggtc atatctcttc 2160 tcagggaaag caggagccct tctggagccc ttcagcaggg tcagggcccc tcgtcttccc 2220 ctcctttccc agagccatct tcccagtcca ccatccccat cgtgggcatt gttgctggcc 2280 tggctgtcct agcagttgtg gtcatcggag ctgtggtcgc tactgtgatg tgtaggagga 2340 agagctcagg tagggaaggg gtgaggggtg gggtctgggt tttcttgtcc cactgggggt 2400 ttcaagcccc aggtagaagt gttccctgcc tcattactgg gaagcagcat ccacacaggg 2460 gctaacgcag cctgggaccc tgtgtgccag cacttactct tttgtgcagc acatgtgaca 2520 atgaaggacg gatgtatcac cttgatggtt gtggtgttgg ggtcctgatt tcagcattca 2580 tgagtcaggg gaaggtccct gctaaggaca gaccttagga gggcagttgg tccaggaccc 2640 acacttgctt tcctcgtgtt tcctgatcct gccttgggtc tgtagtcata cttctggaaa 2700 ttccttttgg gtccaagacg aggaggttcc tctaagatct catggccctg cttcctccca 2760 gtcccctcac aggacatttt cttcccacag gtggaaaagg agggagctac tctcaggctg 2820 cgtgtaagtg gtgggggtgg gagtgtggag gagctcaccc accccataat tcctcctgtc 2880 ccacgtctcc tgcgggctct gaccaggtcc tgtttttgtt ctactccagc cagcgacagt 2940 gcccagggct ctgatgtgtc tctcacagct tgaaaaggtg agattcttgg ggtctagagt 3000 gggcgggggg ggcggggagg gggcagaggg gaaaggcctg ggtaatggag attctttgat 3060 tgggatgttt cgcgtgtgtc gtgggctgtt cagagtgtca tcacttacca tgactaacca 3120 gaatttgttc atgactgttg ttttctgtag cctgagacag ctgtcttgtg agggactgag 3180 atgcaggatt tcttcactcc tcccctttgt gacttcaaga gcctctggca tctctttctg 3240 caaaggcacc tgaatgtgtc tgcgtccctg ttagcataat gtgaggaggt ggagagacag 3300 cccacccttg tgtccactgt gacccct 3327 // ID LN877342; SV 1; linear; genomic DNA; STD; HUM; 3368 BP. XX AC LN877342; XX DT 10-JAN-2018 (Rel. 135, Created) DT 10-JAN-2018 (Rel. 135, Last updated, Version 6) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*04:09N XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3368 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; cbfb36bb01cce88936ed7f7876b23ac4. DR IMGT/HLA; HLA-C*04:09N; HLA01451. XX FH Key Location/Qualifiers FH FT source 1..3368 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300123" FT /db_xref="taxon:9606" FT CDS join(304..376,507..776,1023..1298,1886..2161,2283..2402, FT 2842..2874,2982..3029,3193..3197) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*04:09N" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q5D1W8" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q5D1W8" FT /protein_id="CUA55085.1" FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFSTSVSWPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPREPWVEQEGPEYWDRETQKYKRQAQADRVNLRK FT LRGYYNQSEDGSHTLQRMFGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWKPSSQPTIPIVGIVAGLAVLAVLAVLGAMVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT exon <304..376 FT /gene="HLA-C" FT /allele="HLA-C*04:09N" FT /number=1 FT intron 377..506 FT /gene="HLA-C" FT /allele="HLA-C*04:09N" FT /number=1 FT exon 507..776 FT /gene="HLA-C" FT /allele="HLA-C*04:09N" FT /number=2 FT intron 777..1022 FT /gene="HLA-C" FT /allele="HLA-C*04:09N" FT /number=2 FT exon 1023..1298 FT /gene="HLA-C" FT /allele="HLA-C*04:09N" FT /number=3 FT intron 1299..1885 FT /gene="HLA-C" FT /allele="HLA-C*04:09N" FT /number=3 FT exon 1886..2161 FT /gene="HLA-C" FT /allele="HLA-C*04:09N" FT /number=4 FT intron 2162..2282 FT /gene="HLA-C" FT /allele="HLA-C*04:09N" FT /number=4 FT exon 2283..2402 FT /gene="HLA-C" FT /allele="HLA-C*04:09N" FT /number=5 FT intron 2403..2841 FT /gene="HLA-C" FT /allele="HLA-C*04:09N" FT /number=5 FT exon 2842..2874 FT /gene="HLA-C" FT /allele="HLA-C*04:09N" FT /number=6 FT intron 2875..2981 FT /gene="HLA-C" FT /allele="HLA-C*04:09N" FT /number=6 FT exon 2982..3029 FT /gene="HLA-C" FT /allele="HLA-C*04:09N" FT /number=7 FT intron 3030..3192 FT /gene="HLA-C" FT /allele="HLA-C*04:09N" FT /number=7 FT exon 3193..>3197 FT /gene="HLA-C" FT /allele="HLA-C*04:09N" FT /number=8 XX SQ Sequence 3368 BP; 632 A; 975 C; 1055 G; 706 T; 0 other; gcttggtgta ggagaagagg aatcaggacg aagtcccagg tcccgggcgg ggctctcagg 60 gtctcaggct ccaagggccg tgtctgcact ggggaggcgc cgcgttgggg attctccact 120 cccctgagtt tcacttcttc tcccaacctg cgtcgggtcc ttcttcctga atactcatga 180 cgcgtcccca attcccactc ccattgggtg tcgggttcta gagaagccaa tcagcgtctc 240 cgcagtcccg gttctaaagt ccccagtcac ccacccggac tcagattctc cccagacgcc 300 gagatgcggg tcatggcgcc ccgaaccctc atcctgctgc tctcgggagc cctggccctg 360 accgagacct gggccggtga gtgcggggtt gggagggaaa cggcctctgg ggagaggagc 420 gaggggcccg cccggcgagg gcgcaggacc cggggagccg cgcagggagg agggtcgggc 480 gggtctcagc cactcctcgt ccccaggctc ccactccatg aggtatttct ccacatccgt 540 gtcctggccc ggccgcgggg agccccgctt catcgcagtg ggctacgtgg acgacacgca 600 gttcgtgcgg ttcgacagcg acgccgcgag tccaagaggg gagccgcggg agccgtgggt 660 ggagcaggag gggccggagt attgggaccg ggagacacag aagtacaagc gccaggcaca 720 ggctgaccga gtgaacctgc ggaaactgcg cggctactac aaccagagcg aggacggtga 780 gtgaccccgg cccggggcgc aggtcacgac ccctccccat cccccacgga cggcccgggt 840 cgccccgagt ctccccgtct gagatccacc ccgaggctgc ggaacccgcc cagaccctcg 900 accggagaga gccccagtca cctttacccg gtttcatttt cagtttaggc caaaatcccc 960 gcgggttggt cgggactggg gcggggctcg ggggaccggg ctgaccacgg gggcggggcc 1020 agggtctcac accctccaga ggatgtttgg ctgcgacctg gggccggacg ggcgcctcct 1080 ccgcgggtat aaccagttcg cctacgacgg caaggattac atcgccctga acgaggatct 1140 gcgctcctgg accgccgcgg acacggcggc tcagatcacc cagcgcaagt gggaggcggc 1200 ccgtgaggcg gagcagcgga gagcctacct ggagggcacg tgcgtggagt ggctccgcag 1260 atacctggag aacgggaagg agacgctgca gcgcgcgggt accaggggca gtggggagcc 1320 ttccccatct cccgtagatc tcccgggatg gcctcccacg aggaggggag gaaaatggga 1380 tcagcgctag aatatcgccc tcccttgaat ggagaatggg atgagttttc ctgagtttcc 1440 tctgagggcc ccctctgctc tctaggacaa ttaagggatg aagtccttga ggaaatggag 1500 gggaagacag tccctggaat actgatcagg ggtccccttt gaccactttg accactgcag 1560 cagctgtggt caggctgctg acctttctct caggccttgt tctctgcctg acgctcaatg 1620 tgtttgaagg tttgattcca gcttttctga gtccttcggc ctccactcag gtcaggacca 1680 gaagtcgctg ttcctccctc agagactaga actttccaat gaataggaga ttatcccagg 1740 tgcctgtgtc caggctggcg tctgggttct gtgccccctt ccccacccca ggtgtcctgt 1800 ccattctcag gatggtcaca tgggcgctgt tggagtgtcg caagagagat acaaagtgtc 1860 tgaattttct gactcttccc atcagaacac ccaaagacac acgtgaccca ccatcccgtc 1920 tctgaccatg aggccaccct gaggtgctgg gccctgggct tctaccctgc ggagatcaca 1980 ctgacctggc agtgggatgg ggaggaccaa actcaggaca ccgagcttgt ggagaccagg 2040 ccagcaggag atggaacctt ccagaagtgg gcagctgtgg tggtgccttc tggagaagag 2100 cagagataca cgtgccatgt tcagcacgag gggctgccgg agcccctcac cctgagatgg 2160 agtaaggagg gggatgaggg gtgatgtgtc ttctcaggga aagcagaagt cctggagccc 2220 ttcagccggg tcagggctga ggcttggagg tcagggcccc tcaccttccc ctcctttccc 2280 agagccgtct tcccagccca ccatccccat cgtgggcatc gttgctggcc tggctgtcct 2340 ggctgtccta gctgtcctag gagctatggt ggctgttgtg atgtgtagga ggaagagctc 2400 aggtagggaa ggggtgagga gtggggtctg ggttttcttg ttccactggg agtttcaagc 2460 cccaggtaga agtgtgcccc acctcgttac tggaagcacc atccacacat gggccatccc 2520 agcctgggac cctgtgtgcc agcacttact ctgttgtgaa gcacatgaca atgaaggaca 2580 gatgtatcac cttgatgatt atggtgttgg ggtccttgat tccagcattc atgagtcagg 2640 ggaaggtccc tgctaaggac agaccttagg agggcagttg cttcagaacc cacagctgct 2700 ttccccgtgt ttcctgatcc tgccctgggt ctgcagtcat agttctggaa acttctcttg 2760 ggtccaagac taggaggttc ccctaagatc gcatggccct gcctcctccc tgtcccctca 2820 cagggcattt tcttcccaca ggtggaaaag gagggagctg ctctcaggct gcgtgtaagt 2880 gatggcggtg ggcgtgtgga ggagctcacc caccccataa ttcctcttgt cccacatctc 2940 ctgcgggctc tgaccaggtc tttttttttg ttctacccca gccagcaaca gtgcccaggg 3000 ctctgatgag tctctcatcg cttgtaaggt gagattctgg ggagctgaag tggtcggggg 3060 tggggcagag ggaaaaggcc taggtaatgg ggatcctttg attgggacgt ttcgaatgtg 3120 tggtgagctg ttcagagtgt catcacttac catgactgac ctgaatttgt tcatgactat 3180 tgtgttctgt agcctgagac agctgcctgt gtgggactga gatgcaggat ttcttcacac 3240 ctctcctttg tgacttcaag agcctctggc atctctttct gcaaaggcat ctgaatgtgt 3300 ctgcgttcct gttagcataa tgtgaggagg tggagagaca gcccaccccc gtgtccaccg 3360 tgacccct 3368 // ID LN877343; SV 2; linear; genomic DNA; STD; HUM; 3349 BP. XX AC LN877343; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*16:01:01ext XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3349 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 0c9b3216f1f00e1a3201ea90fb49bd61. DR Ensembl-Gn; ENSG00000237022; homo_sapiens. DR Ensembl-Tr; ENST00000438171; homo_sapiens. DR IMGT/HLA; HLA-C*16:01:01:01; HLA00475. XX FH Key Location/Qualifiers FH FT source 1..3349 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300123" FT /db_xref="taxon:9606" FT CDS join(284..356,487..756,1003..1278,1866..2141,2263..2382, FT 2822..2854,2962..3009,3174..3178) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*16:01:01ext" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:O78179" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:O78179" FT /protein_id="CUA55086.1" FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMRYFYTAVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN FT LRGYYNQSEAGSHTLQWMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAARAAEQQRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHLVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT exon <284..356 FT /gene="HLA-C" FT /allele="HLA-C*16:01:01ext" FT /number=1 FT intron 357..486 FT /gene="HLA-C" FT /allele="HLA-C*16:01:01ext" FT /number=1 FT exon 487..756 FT /gene="HLA-C" FT /allele="HLA-C*16:01:01ext" FT /number=2 FT intron 757..1002 FT /gene="HLA-C" FT /allele="HLA-C*16:01:01ext" FT /number=2 FT exon 1003..1278 FT /gene="HLA-C" FT /allele="HLA-C*16:01:01ext" FT /number=3 FT intron 1279..1865 FT /gene="HLA-C" FT /allele="HLA-C*16:01:01ext" FT /number=3 FT exon 1866..2141 FT /gene="HLA-C" FT /allele="HLA-C*16:01:01ext" FT /number=4 FT intron 2142..2262 FT /gene="HLA-C" FT /allele="HLA-C*16:01:01ext" FT /number=4 FT exon 2263..2382 FT /gene="HLA-C" FT /allele="HLA-C*16:01:01ext" FT /number=5 FT intron 2383..2821 FT /gene="HLA-C" FT /allele="HLA-C*16:01:01ext" FT /number=5 FT exon 2822..2854 FT /gene="HLA-C" FT /allele="HLA-C*16:01:01ext" FT /number=6 FT intron 2855..2961 FT /gene="HLA-C" FT /allele="HLA-C*16:01:01ext" FT /number=6 FT exon 2962..3009 FT /gene="HLA-C" FT /allele="HLA-C*16:01:01ext" FT /number=7 FT intron 3010..3173 FT /gene="HLA-C" FT /allele="HLA-C*16:01:01ext" FT /number=7 FT exon 3174..>3178 FT /gene="HLA-C" FT /allele="HLA-C*16:01:01ext" FT /number=8 XX SQ Sequence 3349 BP; 620 A; 986 C; 1044 G; 699 T; 0 other; gatcaggacg aagtcccagg tcccgggcgg ggctctcagg gtctcaggct ccaagggccg 60 tgtctgcact ggggaggcgc cgcgttgagg attctccact cccctgagtt tcacttcttc 120 tcccaacctg cgtcgggtcc ttcttcctga atactcatga cgcgtcccca attcccactc 180 ccattgggtg tcgggttcta gagaagccaa tcagcgtctc cgcagtcccg gttctaaagt 240 ccccagtcac ccacccggac tcggattctc cccagacgcc gagatgcggg tcatggcgcc 300 ccgaaccctc atcctgctgc tctcgggagc cctggccctg accgagacct gggcctgtga 360 gtgcggggtt gggagggaaa cggcctctgc ggagaggagc gaggggcccg cccggcgagg 420 gcgcaggacc cggggagccg cgcagggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccgt gtcccggccc ggccgcggag 540 agccccgctt catcgcagtg ggctacgtgg acgacacgca gttcgtgcgg ttcgacagcg 600 acgccgcgag tccaagaggg gagccgcggg cgccgtgggt ggagcaggag gggccggagt 660 attgggaccg ggagacacag aagtacaagc gccaggcaca gactgaccga gtgagcctgc 720 ggaacctgcg cggctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac ccctccccat cccccacgga cggcccgggt cgccccgagt ctcccggtct 840 gagatccacc ccgaggctgc ggaacccgcc cagaccctcg gccggagaga gccccagtca 900 cctttacccg gtttcatttt cagtttaggc caaaatcccc gcgggttggt cggggctggg 960 gcggggctcg cgggacgggg ctgaccacgg gggcggggcc agggtctcac accctccagt 1020 ggatgtatgg ctgcgacctg gggcccgacg ggcgcctcct ccgcgggtat gaccagtccg 1080 cctacgacgg caaggattac atcgccctga acgaggacct gcgctcctgg accgccgcgg 1140 acacggcggc tcagatcacc cagcgcaagt gggaggcggc ccgtgcggcg gagcagcaga 1200 gagcctacct ggagggcacg tgcgtggagt ggctccgcag atacctggag aacgggaagg 1260 agacgctgca gcgcgcgggt accaggggca gtggggagcc ttccccatct cctgtagatc 1320 tcccgggatg gcctcccacg aggaggggag gaaaatggga tcagcgctag aatatcgccc 1380 tcccttgaat ggagaatggg atgagttttc ctgagtttcc tctgagggcc ccctctgctc 1440 tctaggacaa ttaagggatg aagtccttga ggaaatggag gggaagacag tccctggaat 1500 actgatcagg ggtccccttt gaccactttg accactgcag cagctgtggt caggctgctg 1560 acctttctct caggccttgt tctctgcctc atgctcaatg tgtttgaagg tttgattcca 1620 gcttttctga gttcttcagc ctccactcag gtcaggacca gaagtcgctg ttcctccctc 1680 agagactaga actttccaat gaataggaga ttatcccagg tgcctgtgtc caggctggcg 1740 tctgggttct gtgccccctt ccccacccca ggtgtcctgt ccattctcag gatggtcaca 1800 tgggcgctgt tggagtgtcg caagagagat acaaagtgtc tgaattttct gactcttccc 1860 gtcagaacac ccaaagacac acgtgaccca ccatctcgtc tctgaccatg aggccaccct 1920 gaggtgctgg gccctgggct tctaccctgc ggagatcaca ctgacctggc agcgggatgg 1980 cgaggaccaa actcaggaca ccgagcttgt ggagaccagg ccagcaggag atggaacctt 2040 ccagaagtgg gcagctgtgg tggtgccttc tggagaagag cagagataca cgtgccatgt 2100 gcagcacgag gggctgccgg agcccctcac cctgagatgg ggtaaggagg gggatgaggg 2160 gtcatgtgtc ttctcaggga aagcagaagt cctggagccc ttcagccggg tcagggctga 2220 ggcttggggg tcagggcccc tcaccttccc ctcctttccc agagccatct tcccagccca 2280 ccatccccat cgtgggcatc gttgctggcc tggctgtcct ggctgtccta gctgtcctag 2340 gagctgtggt ggctgttgtt atgtgtagga ggaagagctc aggtagggaa ggggtgagga 2400 gtggggtctg ggttttcttg tcccactggg agtttcaagc cccaggtaga agtgtgcccc 2460 acctcgttac tggaagcacc atccacacat gggccatccc agcctgggac cctgtgtgcc 2520 agcacttact ctgttgtgaa gcacatgaca atgaaggaca gatgtatcac cttgatgatt 2580 atggtgttgg ggtccttgat tccagcattc atgagtcagg ggaaggtccc tgctaaggac 2640 agaccttagg agggcagttg ctccagaacc cacagctgct ttccctgtgt ttcctgatcc 2700 tgccctgggt ctgcagtcat agttctggaa acttctcttg ggtccaagac taggaggttc 2760 ccctaagatc gcatggccct gcctcctccc tgtcccctca cagggcattt tcttcccaca 2820 ggtggaaaag gagggagctg ctctcaggct gcgtgtaagt gatggcagtg ggcgtgtgga 2880 ggagctcacc caccccataa ttcctcttgt cccacatctc ctgcgggctc tgaccaggtc 2940 tttttttttg ttctacccca gccagcaaca gtgcccaggg ctctgatgag tctctcatcg 3000 cttgtaaagg tgagattctg gggagctgaa gtggtcgggg gtggggcaga gggaaaaggc 3060 ctaggtaatg gggatccttt gattgggacg tttcgaatgt gtggtgagct gttcagagtg 3120 tcatcactta ccatgactga cctgaatttg ttcatgacta ttgtgttctg tagcctgaga 3180 cagctgcctg tgtgggactg agatgcagga tttcttcaca cctctccttt gtgacttcaa 3240 gagcctctgg catctctttc tgcaaaggca tctgaatgcg tctgcgttcc tgttagcata 3300 atgtgaggag gtggagagac agcccacccc cgtgtccacc gtgacccct 3349 // ID LN877344; SV 2; linear; genomic DNA; STD; HUM; 3349 BP. XX AC LN877344; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*04:01:01new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3349 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 655532e23d89c98d6c3ad0544edcdba2. DR IMGT/HLA; HLA-C*04:01:01:06; HLA13527. XX FH Key Location/Qualifiers FH FT source 1..3349 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300124" FT /db_xref="taxon:9606" FT CDS join(284..356,487..756,1003..1278,1866..2141,2263..2382, FT 2822..2854,2962..3009,3174..3178) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*04:01:01new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q5D1W8" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q5D1W8" FT /protein_id="CUA55087.1" FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFSTSVSWPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPREPWVEQEGPEYWDRETQKYKRQAQADRVNLRK FT LRGYYNQSEDGSHTLQRMFGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWKPSSQPTIPIVGIVAGLAVLAVLAVLGAMVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT exon <284..356 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=1 FT intron 357..486 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=1 FT exon 487..756 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=2 FT intron 757..1002 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=2 FT exon 1003..1278 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=3 FT intron 1279..1865 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=3 FT exon 1866..2141 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=4 FT intron 2142..2262 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=4 FT exon 2263..2382 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=5 FT intron 2383..2821 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=5 FT exon 2822..2854 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=6 FT intron 2855..2961 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=6 FT exon 2962..3009 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=7 FT intron 3010..3173 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=7 FT exon 3174..>3178 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=8 XX SQ Sequence 3349 BP; 627 A; 974 C; 1046 G; 702 T; 0 other; aatcaggacg aagtcccagg tcccgggcgg ggctctcagg gtctcaggct ccaagggccg 60 tgtctgcact ggggaggcgc cgcgttgggg attctccact cccctgagtt tcacttcttc 120 tcccaacctg cgtcgggtcc ttcttcctga atactcatga cgcgtcccca attcccactc 180 ccattgggtg tcgggttcta gagaagccaa tcagcgtctc cgcagtcccg gttctaaagt 240 ccccagtcac ccacccggac tcagattctc cccagacgcc gagatgcggg tcatggcgcc 300 ccgaaccctc atcctgctgc tctcgggagc cctggccctg accgagacct gggccggtga 360 gtgcggggtt gggagggaaa cggcctctgg ggagaggagc gaggggcccg cccggcgagg 420 gcgcaggacc cggggagccg cgcagggagg agggtcgggc gggtctcagc cactcctcgt 480 ccccaggctc ccactccatg aggtatttct ccacatccgt gtcctggccc ggccgcgggg 540 agccccgctt catcgcagtg ggctacgtgg acgacacgca gttcgtgcgg ttcgacagcg 600 acgccgcgag tccaagaggg gagccgcggg agccgtgggt ggagcaggag gggccggagt 660 attgggaccg ggagacacag aagtacaagc gccaggcaca ggctgaccga gtgaacctgc 720 ggaaactgcg cggctactac aaccagagcg aggacggtga gtgaccccgg cccggggcgc 780 aggtcacgac ccctccccat cccccacgga cggcccgggt cgccccgagt ctccccgtct 840 gagatccacc ccgaggctgc ggaacccgcc cagaccctcg accggagaga gccccagtca 900 cctttacccg gtttcatttt cagtttaggc caaaatcccc gcgggttggt cgggactggg 960 gcggggctcg ggggaccggg ctgaccacgg gggcggggcc agggtctcac accctccaga 1020 ggatgtttgg ctgcgacctg gggccggacg ggcgcctcct ccgcgggtat aaccagttcg 1080 cctacgacgg caaggattac atcgccctga acgaggatct gcgctcctgg accgccgcgg 1140 acacggcggc tcagatcacc cagcgcaagt gggaggcggc ccgtgaggcg gagcagcgga 1200 gagcctacct ggagggcacg tgcgtggagt ggctccgcag atacctggag aacgggaagg 1260 agacgctgca gcgcgcgggt accaggggca gtggggagcc ttccccatct cccgtagatc 1320 tcccgggatg gcctcccacg aggaggggag gaaaatggga tcagcgctag aatatcgccc 1380 tcccttgaat ggagaatggg atgagttttc ctgagtttcc tctgagggcc ccctctgctc 1440 tctaggacaa ttaagggatg aagtccttga ggaaatggag gggaagacag tccctggaat 1500 actgatcagg ggtccccttt gaccactttg accactgcag cagctgtggt caggctgctg 1560 acctttctct caggccttgt tctctgcctg acgctcaatg tgtttgaagg tttgattcca 1620 gcttttctga gtccttcggc ctccactcag gtcaggacca gaagtcgctg ttcctccctc 1680 agagactaga actttccaat gaataggaga ttatcccagg tgcctgtgtc caggctggcg 1740 tctgggttct gtgccccctt ccccacccca ggtgtcctgt ccattctcag gatggtcaca 1800 tgggcgctgt tggagtgtcg caagagagat acaaagtgtc tgaattttct gactcttccc 1860 atcagaacac ccaaagacac acgtgaccca ccatcccgtc tctgaccatg aggccaccct 1920 gaggtgctgg gccctgggct tctaccctgc ggagatcaca ctgacctggc agtgggatgg 1980 ggaggaccaa actcaggaca ccgagcttgt ggagaccagg ccagcaggag atggaacctt 2040 ccagaagtgg gcagctgtgg tggtgccttc tggagaagag cagagataca cgtgccatgt 2100 tcagcacgag gggctgccgg agcccctcac cctgagatgg agtaaggagg gggatgaggg 2160 gtgatgtgtc ttctcaggga aagcagaagt cctggagccc ttcagccggg tcagggctga 2220 ggcttggagg tcagggcccc tcaccttccc ctcctttccc agagccgtct tcccagccca 2280 ccatccccat cgtgggcatc gttgctggcc tggctgtcct ggctgtccta gctgtcctag 2340 gagctatggt ggctgttgtg atgtgtagga ggaagagctc aggtagggaa ggggtgagga 2400 gtggggtctg ggttttcttg ttccactggg agtttcaagc cccaggtaga agtgtgcccc 2460 acctcgttac tggaagcacc atccacacgt gggccatccc agcctgggac cctgtgtgcc 2520 agcacttact ctgttgtgaa gcacatgaca atgaaggaca gatgtatcac cttgatgatt 2580 atggtgttgg ggtccttgat tccagcattc atgagtcagg ggaaggtccc tgctaaggac 2640 agaccttagg agggcagttg cttcagaacc cacagctgct ttccccgtgt ttcctgatcc 2700 tgccctgggt ctgcagtcat agttctggaa acttctcttg ggtccaagac taggaggttc 2760 ccctaagatc gcatggccct gcctcctccc tgtcccctca cagggcattt tcttcccaca 2820 ggtggaaaag gagggagctg ctctcaggct gcgtgtaagt gatggcggtg ggcgtgtgga 2880 ggagctcacc caccccataa ttcctcttgt cccacatctc ctgcgggctc tgaccaggtc 2940 tttttttttg ttctacccca gccagcaaca gtgcccaggg ctctgatgag tctctcatcg 3000 cttgtaaagg tgagattctg gggagctgaa gtggtcgggg gtggggcaga gggaaaaggc 3060 ctaggtaatg gggatccttt gattgggacg tttcgaatgt gtggtgagct gttcagagtg 3120 tcatcactta ccatgactga cctgaatttg ttcatgacta ttgtgttctg tagcctgaga 3180 cagctgcctg tgtgggactg agatgcagga tttcttcaca cctctccttt gtgacttcaa 3240 gagcctctgg catctctttc tgcaaaggca tctgaatgtg tctgcgttcc tgttagcata 3300 atgtgaggag gtggagagac agcccacccc cgtgtccacc gtgacccct 3349 // ID LN877345; SV 2; linear; genomic DNA; STD; HUM; 3349 BP. XX AC LN877345; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*16:04:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3349 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; aefc6289675459afe38397002b7451c4. DR IMGT/HLA; HLA-C*16:04:01:01; HLA00478. XX FH Key Location/Qualifiers FH FT source 1..3349 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300124" FT /db_xref="taxon:9606" FT CDS join(284..356,487..756,1003..1278,1866..2141,2263..2382, FT 2822..2854,2962..3009,3174..3178) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:C9E8W0" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:C9E8W0" FT /protein_id="CUA55088.1" FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMRYFYTAVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN FT LRGYYNQSEAGSHTLQWMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAARAAEQWRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHLVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT exon <284..356 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=1 FT intron 357..486 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=1 FT exon 487..756 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=2 FT intron 757..1002 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=2 FT exon 1003..1278 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=3 FT intron 1279..1865 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=3 FT exon 1866..2141 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=4 FT intron 2142..2262 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=4 FT exon 2263..2382 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=5 FT intron 2383..2821 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=5 FT exon 2822..2854 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=6 FT intron 2855..2961 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=6 FT exon 2962..3009 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=7 FT intron 3010..3173 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=7 FT exon 3174..>3178 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=8 XX SQ Sequence 3349 BP; 619 A; 985 C; 1045 G; 700 T; 0 other; gatcaggacg aagtcccagg tcccgggcgg ggctctcagg gtctcaggct ccaagggccg 60 tgtctgcact ggggaggcgc cgcgttgagg attctccact cccctgagtt tcacttcttc 120 tcccaacctg cgtcgggtcc ttcttcctga atactcatga cgcgtcccca attcccactc 180 ccattgggtg tcgggttcta gagaagccaa tcagcgtctc cgcagtcccg gttctaaagt 240 ccccagtcac ccacccggac tcggattctc cccagacgcc gagatgcggg tcatggcgcc 300 ccgaaccctc atcctgctgc tctcgggagc cctggccctg accgagacct gggcctgtga 360 gtgcggggtt gggagggaaa cggcctctgc ggagaggagc gaggggcccg cccggcgagg 420 gcgcaggacc cggggagccg cgcagggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccgt gtcccggccc ggccgcggag 540 agccccgctt catcgcagtg ggctacgtgg acgacacgca gttcgtgcgg ttcgacagcg 600 acgccgcgag tccaagaggg gagccgcggg cgccgtgggt ggagcaggag gggccggagt 660 attgggaccg ggagacacag aagtacaagc gccaggcaca gactgaccga gtgagcctgc 720 ggaacctgcg cggctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac ccctccccat cccccacgga cggcccgggt cgccccgagt ctcccggtct 840 gagatccacc ccgaggctgc ggaacccgcc cagaccctcg gccggagaga gccccagtca 900 cctttacccg gtttcatttt cagtttaggc caaaatcccc gcgggttggt cggggctggg 960 gcggggctcg cgggacgggg ctgaccacgg gggcggggcc agggtctcac accctccagt 1020 ggatgtatgg ctgcgacctg gggcccgacg ggcgcctcct ccgcgggtat gaccagtccg 1080 cctacgacgg caaggattac atcgccctga acgaggacct gcgctcctgg accgccgcgg 1140 acacggcggc tcagatcacc cagcgcaagt gggaggcggc ccgtgcggcg gagcagtgga 1200 gagcctacct ggagggcacg tgcgtggagt ggctccgcag atacctggag aacgggaagg 1260 agacgctgca gcgcgcgggt accaggggca gtggggagcc ttccccatct cctgtagatc 1320 tcccgggatg gcctcccacg aggaggggag gaaaatggga tcagcgctag aatatcgccc 1380 tcccttgaat ggagaatggg atgagttttc ctgagtttcc tctgagggcc ccctctgctc 1440 tctaggacaa ttaagggatg aagtccttga ggaaatggag gggaagacag tccctggaat 1500 actgatcagg ggtccccttt gaccactttg accactgcag cagctgtggt caggctgctg 1560 acctttctct caggccttgt tctctgcctc atgctcaatg tgtttgaagg tttgattcca 1620 gcttttctga gttcttcagc ctccactcag gtcaggacca gaagtcgctg ttcctccctc 1680 agagactaga actttccaat gaataggaga ttatcccagg tgcctgtgtc caggctggcg 1740 tctgggttct gtgccccctt ccccacccca ggtgtcctgt ccattctcag gatggtcaca 1800 tgggcgctgt tggagtgtcg caagagagat acaaagtgtc tgaattttct gactcttccc 1860 gtcagaacac ccaaagacac acgtgaccca ccatctcgtc tctgaccatg aggccaccct 1920 gaggtgctgg gccctgggct tctaccctgc ggagatcaca ctgacctggc agcgggatgg 1980 cgaggaccaa actcaggaca ccgagcttgt ggagaccagg ccagcaggag atggaacctt 2040 ccagaagtgg gcagctgtgg tggtgccttc tggagaagag cagagataca cgtgccatgt 2100 gcagcacgag gggctgccgg agcccctcac cctgagatgg ggtaaggagg gggatgaggg 2160 gtcatgtgtc ttctcaggga aagcagaagt cctggagccc ttcagccggg tcagggctga 2220 ggcttggggg tcagggcccc tcaccttccc ctcctttccc agagccatct tcccagccca 2280 ccatccccat cgtgggcatc gttgctggcc tggctgtcct ggctgtccta gctgtcctag 2340 gagctgtggt ggctgttgtt atgtgtagga ggaagagctc aggtagggaa ggggtgagga 2400 gtggggtctg ggttttcttg tcccactggg agtttcaagc cccaggtaga agtgtgcccc 2460 acctcgttac tggaagcacc atccacacat gggccatccc agcctgggac cctgtgtgcc 2520 agcacttact ctgttgtgaa gcacatgaca atgaaggaca gatgtatcac cttgatgatt 2580 atggtgttgg ggtccttgat tccagcattc atgagtcagg ggaaggtccc tgctaaggac 2640 agaccttagg agggcagttg ctccagaacc cacagctgct ttccctgtgt ttcctgatcc 2700 tgccctgggt ctgcagtcat agttctggaa acttctcttg ggtccaagac taggaggttc 2760 ccctaagatc gcatggccct gcctcctccc tgtcccctca cagggcattt tcttcccaca 2820 ggtggaaaag gagggagctg ctctcaggct gcgtgtaagt gatggcagtg ggcgtgtgga 2880 ggagctcacc caccccataa ttcctcttgt cccacatctc ctgcgggctc tgaccaggtc 2940 tttttttttg ttctacccca gccagcaaca gtgcccaggg ctctgatgag tctctcatcg 3000 cttgtaaagg tgagattctg gggagctgaa gtggtcgggg gtggggcaga gggaaaaggc 3060 ctaggtaatg gggatccttt gattgggacg tttcgaatgt gtggtgagct gttcagagtg 3120 tcatcactta ccatgactga cctgaatttg ttcatgacta ttgtgttctg tagcctgaga 3180 cagctgcctg tgtgggactg agatgcagga tttcttcaca cctctccttt gtgacttcaa 3240 gagcctctgg catctctttc tgcaaaggca tctgaatgcg tctgcgttcc tgttagcata 3300 atgtgaggag gtggagagac agcccacccc cgtgtccacc gtgacccct 3349 // ID LN877346; SV 2; linear; genomic DNA; STD; HUM; 3327 BP. XX AC LN877346; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*35:02:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3327 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 69e50f2988b92d745c93ebc9877eace7. DR IMGT/HLA; HLA-B*35:02:01:01; HLA00238. XX FH Key Location/Qualifiers FH FT source 1..3327 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300124" FT /db_xref="taxon:9606" FT CDS join(285..357,487..756,1002..1277,1853..2128,2233..2349, FT 2791..2823,2930..2973) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*35:02:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:C5MK55" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:C5MK55" FT /protein_id="CUA55089.1" FT /translation="MRVTAPRTVLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRESLRN FT LRGYYNQSEAGSHIIQRMYGCDLGPDGRFLRGHNQYAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*35:02:01" FT /number=1 FT intron 358..486 FT /gene="HLA-B" FT /allele="HLA-B*35:02:01" FT /number=1 FT exon 487..756 FT /gene="HLA-B" FT /allele="HLA-B*35:02:01" FT /number=2 FT intron 757..1001 FT /gene="HLA-B" FT /allele="HLA-B*35:02:01" FT /number=2 FT exon 1002..1277 FT /gene="HLA-B" FT /allele="HLA-B*35:02:01" FT /number=3 FT intron 1278..1852 FT /gene="HLA-B" FT /allele="HLA-B*35:02:01" FT /number=3 FT exon 1853..2128 FT /gene="HLA-B" FT /allele="HLA-B*35:02:01" FT /number=4 FT intron 2129..2232 FT /gene="HLA-B" FT /allele="HLA-B*35:02:01" FT /number=4 FT exon 2233..2349 FT /gene="HLA-B" FT /allele="HLA-B*35:02:01" FT /number=5 FT intron 2350..2790 FT /gene="HLA-B" FT /allele="HLA-B*35:02:01" FT /number=5 FT exon 2791..2823 FT /gene="HLA-B" FT /allele="HLA-B*35:02:01" FT /number=6 FT intron 2824..2929 FT /gene="HLA-B" FT /allele="HLA-B*35:02:01" FT /number=6 FT exon 2930..>2973 FT /gene="HLA-B" FT /allele="HLA-B*35:02:01" FT /number=7 XX SQ Sequence 3327 BP; 620 A; 970 C; 1042 G; 695 T; 0 other; gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagagcct 60 tgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcggatatct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccgt cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggccggtg 360 agtgcggggt cgggagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg 420 gcgcaggacc tgaggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg 540 agccccgctt catcgcagtg ggctacgtgg acgacaccca gttcgtgagg ttcgacagcg 600 acgccgcgag tccgaggacg gagccccggg cgccatggat agagcaggag gggccggagt 660 attgggaccg gaacacacag atcttcaaga ccaacacaca gacttaccga gagagcctgc 720 ggaacctgcg cggctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgcctcc ctgaggccgc gggacccgcc cagaccctcg accggcgaga gccccaggcg 900 cgtttacccg gtttcatttt cagttgaggc caaaatcccc gcgggttggt cggggcgggg 960 cggggctcgg gggacggggc tgaccgcggg gccggggcca gggtctcaca tcatccagag 1020 gatgtatggc tgcgacctgg ggcccgacgg gcgcttcctc cgcgggcata accagtacgc 1080 ctacgacggc aaggattaca tcgccctgaa cgaggacctg agctcctgga ccgcggcgga 1140 caccgcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcagctgag 1200 agcctacctg gagggcctgt gcgtggagtg gctccgcaga tacctggaga acgggaagga 1260 gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320 ccggggatgg cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct 1380 cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440 ctaggacaat taagggatga cgtctctgag gaaatggagg ggaagacagt ccctagaata 1500 ctgatcaggg gtcccctttg acccctgcag cagccttggg aaccgtgact tttcctctca 1560 ggccttgttc tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt 1620 cactttacct ccactcagat caggagcaga agtccctgtt ccccgctcag agactcgaac 1680 tttccaatga ataggagatt atcccaggtg cctgcgtcca ggctggtgtc tgggttctgt 1740 gccccttccc cacaccaggt gtcctgtcca ttctcaggct ggtcacatgg gtggtcctag 1800 ggtgtcccat gagagatgca aagcgcctga attttctgac tcttcccatc agacccccca 1860 aagacacacg tgacccacca ccccgtctct gaccatgagg ccaccctgag gtgctgggcc 1920 ctgggcttct accctgcgga gatcacactg acctggcagc gggatggcga ggaccaaact 1980 caggacactg agcttgtgga gaccagacca gcaggagata gaaccttcca gaagtgggca 2040 gctgtggtgg tgccttctgg agaagagcag agatacacat gccatgtaca gcatgagggg 2100 ctgccgaagc ccctcaccct gagatggggt aaggaggggg atgaggggtc atatctcttc 2160 tcagggaaag caggagccct tctggagccc ttcagcaggg tcagggcccc tcgtcttccc 2220 ctcctttccc agagccatct tcccagtcca ccatccccat cgtgggcatt gttgctggcc 2280 tggctgtcct agcagttgtg gtcatcggag ctgtggtcgc tactgtgatg tgtaggagga 2340 agagctcagg tagggaaggg gtgaggggtg gggtctgggt tttcttgtcc cactgggggt 2400 ttcaagcccc aggtagaagt gttccctgcc tcattactgg gaagcagcat ccacacaggg 2460 gctaacgcag cctgggaccc tgtgtgccag cacttactct tttgtgcagc acatgtgaca 2520 atgaaggacg gatgtatcac cttgatggtt gtggtgttgg ggtcctgatt tcagcattca 2580 tgagtcaggg gaaggtccct gctaaggaca gaccttagga gggcagttgg tccaggaccc 2640 acacttgctt tcctcgtgtt tcctgatcct gccttgggtc tgtagtcata cttctggaaa 2700 ttccttttgg gtccaagacg aggaggttcc tctaagatct catggccctg cttcctccca 2760 gtcccctcac aggacatttt cttcccacag gtggaaaagg agggagctac tctcaggctg 2820 cgtgtaagtg gtgggggtgg gagtgtggag gagctcaccc accccataat tcctcctgtc 2880 ccacgtctcc tgcgggctct gaccaggtcc tgtttttgtt ctactccagc cagcgacagt 2940 gcccagggct ctgatgtgtc tctcacagct tgaaaaggtg agattcttgg ggtctagagt 3000 gggcgggggg ggcggggagg gggcagaggg gaaaggcctg ggtaatggag attctttgat 3060 tgggatgttt cgcgtgtgtc gtgggctgtt cagagtgtca tcacttacca tgactaacca 3120 gaatttgttc atgactgttg ttttctgtag cctgagacag ctgtcttgtg agggactgag 3180 atgcaggatt tcttcactcc tcccctttgt gacttcaaga gcctctggca tctctttctg 3240 caaaggcacc tgaatgtgtc tgcgtccctg ttagcctaat gtgaggaggt ggagagacag 3300 cccacccccg tgtccactgt gacccct 3327 // ID LN877347; SV 2; linear; genomic DNA; STD; HUM; 3340 BP. XX AC LN877347; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*49:01:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3340 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 7da4db3c2933e38871dde7de2cdf0131. DR IMGT/HLA; HLA-B*49:01:01:01; HLA00340. XX FH Key Location/Qualifiers FH FT source 1..3340 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300124" FT /db_xref="taxon:9606" FT CDS join(285..357,486..755,1006..1281,1857..2132,2237..2353, FT 2795..2827,2934..2977) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*49:01:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q5TK75" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q5TK75" FT /protein_id="CUA55090.1" FT /translation="MRVTAPRTVLLLLSAALALTETWAGSHSMRYFHTAMSRPGRGEPR FT FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRI FT ALRYYNQSEAGSHTWQRMYGCDLGPDGRLLRGYNQLAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAAREAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*49:01:01" FT /number=1 FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*49:01:01" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*49:01:01" FT /number=2 FT intron 756..1005 FT /gene="HLA-B" FT /allele="HLA-B*49:01:01" FT /number=2 FT exon 1006..1281 FT /gene="HLA-B" FT /allele="HLA-B*49:01:01" FT /number=3 FT intron 1282..1856 FT /gene="HLA-B" FT /allele="HLA-B*49:01:01" FT /number=3 FT exon 1857..2132 FT /gene="HLA-B" FT /allele="HLA-B*49:01:01" FT /number=4 FT intron 2133..2236 FT /gene="HLA-B" FT /allele="HLA-B*49:01:01" FT /number=4 FT exon 2237..2353 FT /gene="HLA-B" FT /allele="HLA-B*49:01:01" FT /number=5 FT intron 2354..2794 FT /gene="HLA-B" FT /allele="HLA-B*49:01:01" FT /number=5 FT exon 2795..2827 FT /gene="HLA-B" FT /allele="HLA-B*49:01:01" FT /number=6 FT intron 2828..2933 FT /gene="HLA-B" FT /allele="HLA-B*49:01:01" FT /number=6 FT exon 2934..>2977 FT /gene="HLA-B" FT /allele="HLA-B*49:01:01" FT /number=7 XX SQ Sequence 3340 BP; 618 A; 974 C; 1049 G; 699 T; 0 other; gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagcgtcg ccgtggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcac 300 cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc ggcagggaaa tggcctctgt ggggaggagc gaggggaccg caggcggggg 420 cgcaggaccc ggggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcca caccgccatg tcccggcccg gccgcgggga 540 gccccgcttc atcaccgtgg gctacgtgga cgacacgctg ttcgtgaggt tcgacagcga 600 cgccacgagt ccgaggaagg agccgcgggc gccatggata gagcaggagg ggccggagta 660 ttgggaccgg gagacacaga tctccaagac caacacacag acttaccgag agaacctgcg 720 gatcgcgctc cgctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcccccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggcggggc tcgggggacg gggctgaccg cggggcctgg gccagggtct cacacttggc 1020 agaggatgta tggctgcgac ctggggcccg acgggcgcct cctccgcggg tataaccagt 1080 tagcctacga cggcaaggat tacatcgccc tgaacgagga cctgagctcc tggaccgcgg 1140 cggacaccgc ggctcagatc acccagcgca agtgggaggc ggcccgtgag gcggagcagc 1200 tgagagccta cctggagggc ctgtgcgtgg agtggctccg cagatacctg gagaacggga 1260 aggagacgct gcagcgcgcg ggtaccaggg gcagtgggga gccttcccca tctcctatag 1320 gtcgccgggg atggcctccc acgagaagag gaggaaaatg ggatcagcgc tagaatgtcg 1380 ccctcccttg aatggagaat ggcatgagtt ttcctgagtt tcctctgagg gccccctctt 1440 ctctctagga caattaaggg atgacgtctc tgaggaaatg gaggggaaga cagtccctag 1500 aatactgatc aggggtcccc tttgacccct gcagcagcct tgggaaccgt gacttttcct 1560 ctcaggcctt gttctctgcc tcacactcag tgtgtttggg gctctgattc cagcacttct 1620 gagtcacttt acctccactc agatcaggag cagaagtccc tgttccccac tcagagactc 1680 gaactttcca atgaatagga gattatccca ggtgcctgcg tccaggctgg tgtctgggtt 1740 ctgtgcccct tccccacccc aggtgtcctg tccattctca ggctggtcac atgggtggtc 1800 ctagggtgtc ccatgagaga tgcaaagcgc ctgaattttc tgactcttcc catcagaccc 1860 cccaaagaca catgtgaccc accaccccat ctctgaccat gaggccaccc tgaggtgctg 1920 ggccctgggc ttctaccctg cggagatcac actgacctgg cagcgggatg gcgaggacca 1980 aactcaggac accgagcttg tggagaccag accagcagga gatagaacct tccagaagtg 2040 ggcagctgtg gtggtgcctt ctggagaaga gcagagatac acatgccatg tacagcatga 2100 ggggctgccg aagcccctca ccctgagatg gggtaaggag ggggatgagg ggtcatatct 2160 gttctcaggg aaagcaggag cccttctgga gcccttcagc agggtcaggg cccctcatct 2220 tcccctcctt tcccagagcc atcttcccag tccaccatcc ccatcgtggg cattgttgct 2280 ggcctggctg tcctagcagt tgtggtcatc ggagctgtgg tcgctactgt gatgtgtagg 2340 aggaagagct caggtaggga aggggtgagg ggtggggtct gggttttctt gtcccactgg 2400 gggtttcaag ccccaggtag aagtgttccc tgcctcatta ctgggaagca gcatccacac 2460 aggggctaac gcagcctggg accctgtgtg ccagcactta ctcttttgtg cagcacatgt 2520 gacaatgaag gacggatgta tcgccttgat ggttgtggtg ttggggtcct gattccagca 2580 ttcatgagtc aggggaaggt ccctgctaag gacagacctt aggagggcag ttggtccagg 2640 acccacactt gctttcctcg tgtttcctga tcctgccttg ggtctgtagt catacttctg 2700 gaaattcctt ttggttccaa gacgaggagg ttcctctaag atctcatggc cctgcttcct 2760 cccagtcccc tcacaggaca ttttcttccc acaggtggaa aaggagggag ctactctcag 2820 gctgcgtgta agtggtgggg gtgggagtgt ggaggagctc acccacccca taattcctcc 2880 tgtcccacgt ctcctgaggg ctctgaccag gtcctgtttt tgttctactc cagccagcga 2940 cagtgcccag ggctctgatg tgtctctcac agcttgaaaa ggtgagattc ttggggtcta 3000 gagtgggtgg ggtggcgggt ctgggggtgg gtggggcagt ggggaaaggc ctgggtaatg 3060 gagattcttt gattgggatg tttcgcgtgt gtggtgggct gttcagagtg tcatcactta 3120 ccatgactaa ccagaatttg ttcatgactg ttgttttctg tagcctgaga cagctgtctt 3180 gtgagggact gagatgcagg atttcttcac gcctcccctt tgtgacttca agagcctctg 3240 gcatctcttt ctgcaaaggc acctgaatgt gtctgcgtcc ctgttagcat aatgtgagga 3300 ggtggagaga cagcccaccc ttgtgtccac tgtgacccct 3340 // ID LN877348; SV 2; linear; genomic DNA; STD; HUM; 3354 BP. XX AC LN877348; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*07:04:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3354 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 7aa1a4c1a413aca4e232a2e7dce8ee4d. DR IMGT/HLA; HLA-C*07:04:01:01; HLA00436. XX FH Key Location/Qualifiers FH FT source 1..3354 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300125" FT /db_xref="taxon:9606" FT CDS join(281..353,484..753,1004..1279,1867..2142,2267..2386, FT 2827..2859,2967..3014,3179..3183) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*07:04:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q7YQB2" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q7YQB2" FT /protein_id="CUA55091.1" FT /translation="MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVSLRN FT LRGYYNQSEDGSHTFQRMYGCDLGPDGRLLRGYDQFAYDGKDYIALNEDLRSWTAADTA FT AQITQRKLEAARAAEQDRAYLEGTCVEWLRRYLENGKKTLQRAEPPKTHVTHHPLSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY FT TCHMQHEGLQEPLTLSWEPSSQPTIPIMGIVAGLAVLVVLAVLGAVVTAMMCRRKSSGG FT KGGSCSQAACSNSAQGSDESLITCKA" FT exon <281..353 FT /gene="HLA-C" FT /allele="HLA-C*07:04:01" FT /number=1 FT intron 354..483 FT /gene="HLA-C" FT /allele="HLA-C*07:04:01" FT /number=1 FT exon 484..753 FT /gene="HLA-C" FT /allele="HLA-C*07:04:01" FT /number=2 FT intron 754..1003 FT /gene="HLA-C" FT /allele="HLA-C*07:04:01" FT /number=2 FT exon 1004..1279 FT /gene="HLA-C" FT /allele="HLA-C*07:04:01" FT /number=3 FT intron 1280..1866 FT /gene="HLA-C" FT /allele="HLA-C*07:04:01" FT /number=3 FT exon 1867..2142 FT /gene="HLA-C" FT /allele="HLA-C*07:04:01" FT /number=4 FT intron 2143..2266 FT /gene="HLA-C" FT /allele="HLA-C*07:04:01" FT /number=4 FT exon 2267..2386 FT /gene="HLA-C" FT /allele="HLA-C*07:04:01" FT /number=5 FT intron 2387..2826 FT /gene="HLA-C" FT /allele="HLA-C*07:04:01" FT /number=5 FT exon 2827..2859 FT /gene="HLA-C" FT /allele="HLA-C*07:04:01" FT /number=6 FT intron 2860..2966 FT /gene="HLA-C" FT /allele="HLA-C*07:04:01" FT /number=6 FT exon 2967..3014 FT /gene="HLA-C" FT /allele="HLA-C*07:04:01" FT /number=7 FT intron 3015..3178 FT /gene="HLA-C" FT /allele="HLA-C*07:04:01" FT /number=7 FT exon 3179..>3183 FT /gene="HLA-C" FT /allele="HLA-C*07:04:01" FT /number=8 XX SQ Sequence 3354 BP; 622 A; 992 C; 1041 G; 699 T; 0 other; gatcaggacg aagtcccagg tcccgggcgg ggctctcagg gtctcaggct ccaagggccg 60 tgtctgcact ggggaggcgc cgcgttgagg attctccact cccctgagtt tcacttctcc 120 caacctgcgt cgggtccttc ttcctgaata ctcatgacgc gtccccaatt cccactccca 180 ttgggtgtcg ggttctagag aagccaatca gcgtctccgc agtcccggtt ctaaagtccc 240 cagtcaccca cccggactca cattctcccc agaggccgag atgcgggtca tggcgccccg 300 agccctcctc ctgctgctct cgggaggcct ggccctgacc gagacctggg cctgtgagtg 360 cggggttggg agggaagcgg cctctgcgga gaggagcgag gggccctccc ggcgagggcg 420 caggacccgg ggagccgcgc agggaggtgg gtcgggcggg tctcagcccc tcctcgcccc 480 caggctccca ctccatgagg tatttcgaca ccgccgtgtc ccggcccggc cgcggagagc 540 cccgcttcat ctcagtgggc tacgtggacg acacgcagtt cgtgcggttc gacagcgacg 600 ccgcgagtcc gagaggggag ccccgggcgc cgtgggtgga gcaggagggg ccggagtatt 660 gggaccggga gacacagaag tacaagcgcc aggcacaggc tgaccgagtg agcctgcgga 720 acctgcgcgg ctactacaac cagagcgagg acggtgagtg accccggccc ggggcgcagg 780 tcacgacccc tccccatccc ccacggacgg cccgggtcgc cccgagtctc cccgtctgag 840 atccacccca aggtggatct gcggaacccg cccagaccct cgaccggaga gagccccagt 900 cgcctttacc cggtttcatt ttcggtttag gccaaaatcc ccgcgggttg gtcggggcgg 960 ggcggggctc gggggactgg gctgaccgcg ggggcggggc cagggtctca caccttccag 1020 aggatgtatg gctgcgacct ggggcccgac gggcgcctcc tccgcgggta tgaccagttc 1080 gcctacgacg gcaaggatta catcgccctg aacgaggacc tgcgctcctg gaccgccgcg 1140 gacaccgcgg ctcagatcac ccagcgcaag ttggaggcgg cccgtgcggc ggagcaggac 1200 agagcctacc tggagggcac gtgcgtggag tggctccgca gatacctgga gaacgggaag 1260 aagacgctgc agcgcgcggg taccaggggc agtggggagc cttccccatc tcctatagat 1320 ctcccgggat ggcctcccac gaggagggga ggaaaatggg atcagcactg gaatatcgcc 1380 ctcccttgaa tggagaatgg catgagtttt cctgagtttc ctctgagggc cccctctgct 1440 ctctaggaca attaagggat gaagtctctg aggaaatgga ggggaagaca gtccctggaa 1500 tactgatcag gggtctcctt tgaccacttt gaccactgca gcagctgtgg tcaggctgct 1560 gacctttctc tcaggccttg ttctctgcct cacactcaat gtgtctgaag gtttgattcc 1620 agcttttctg agtcctgcag cctccactca ggtcaggacc agaagtcgct gttcctccct 1680 cagagactag aactttccaa tgaataggag attatcccag gtgcctgtgt ccaggctggc 1740 gtctgggttc tgtgccgcct tccccacccc aggtgtcctg tccattctca ggatggtcac 1800 atgggcgctg ctggagtgtc ccaagagaga tgcaaagtgt ctgaattttc tgactcttcc 1860 cgtcagaacc cccaaagaca cacgtgaccc accaccccct ctctgaccat gaggccaccc 1920 tgaggtgctg ggccctgggc ttctaccctg cggagatcac actgacctgg cagcgggatg 1980 gggaggacca gacccaggac accgagcttg tggagaccag gccagcagga gatggaacct 2040 tccagaagtg ggcagctgtg gtggtgcctt ctggacaaga gcagagatac acgtgccata 2100 tgcagcacga ggggctgcaa gagcccctca ccctgagctg gggtaaggag gggaatgggg 2160 ggtcacatct cttatcagag aaagcagaag tccttctgga gcccttcagc cgggtcaggg 2220 ctgaggcttg ggggtcaggg cccctcacct tctcctcctt tcccagagcc atcttcccag 2280 cccaccatcc ccatcatggg catcgttgct ggcctggctg tcctggttgt cctagctgtc 2340 cttggagctg tggtcaccgc tatgatgtgt aggaggaaga gctcaggtag ggaaggggtg 2400 aagagcgggg tctgggtttt cttgtcccac tgggagtttc aagccccagg tagaagtgtg 2460 ccccgccttg ttactggaag caccatccac acatgggcca tcccagcctg ggaccctgtg 2520 tgccagcact tactcttttg tgaagcacat gtgacaatga aggacggatg tatcaccttg 2580 atgattatgg tgttggggtc ctgattccag cattcatgag tcaggggaag gtccctgcta 2640 aggacagacc ttaggagggc agttggtcca gaacccacag ctgctttccc catgtttcct 2700 gatcctgccc tgggtctgca gtcgtagttc tggaaacttc tcttgggtcc aagactagga 2760 ggttccccta agatcacatg gccctgcctc ctcccagtcc cctcataggg cattttcttc 2820 ccacaggtgg aaaaggaggg agctgctctc aggctgcgtg taagtgatgg cggcgggcgt 2880 gtggaggagc tcacctactc cataattcct cttgtcccac atctcctgcg ggctctgacc 2940 aggtcttttt ttttgttcta ccccaggcag caacagtgcc cagggctctg atgagtctct 3000 catcacttgt aaaggtgaga ttctggggag ctgaagtggt cgggggtggg gcagagggaa 3060 aaggcctggg taatggggat tctttgattg ggacgtttcg agtgtgtggt gggccgttca 3120 gagtgtcatc acttaccatg actgacctga atttgttcat gactattgtg ttctgtagcc 3180 tgagacagct gcctgtgtgg gactgagatg caggatttct tcacacctct cctttgtgac 3240 ttcaagagcc tctggcatct ctttctgcaa aggcatctga atgtgtctgc gttcctgtta 3300 gcataatgtg aggaggtgga gagacagccc acccccgtgt ccaccgtgac ccct 3354 // ID LN877349; SV 2; linear; genomic DNA; STD; HUM; 3315 BP. XX AC LN877349; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-A gene for MHC class I antigen, allele HLA-A*29:02:01:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3315 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 6091b7e4094bcf3aa22f675fea9c46ea. DR Ensembl-Gn; ENSG00000231834; homo_sapiens. DR Ensembl-Tr; ENST00000550728; homo_sapiens. DR IMGT/HLA; HLA-A*29:02:01:01; HLA00086. XX FH Key Location/Qualifiers FH FT source 1..3315 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300126" FT /db_xref="taxon:9606" FT CDS join(301..373,503..772,1014..1289,1890..2165,2265..2381, FT 2822..2854,2997..3044,3214..3218) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-A" FT /allele="HLA-A*29:02:01:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:B0UXQ0" FT /db_xref="HGNC:HGNC:4931" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:B0UXQ0" FT /protein_id="CUA55092.1" FT /translation="MAVMAPRTLLLLLLGALALTQTWAGSHSMRYFTTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDLQTRNVKAQSQTDRANLGT FT LRGYYNQSEAGSHTIQMMYGCDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMA FT AQITQRKWEAARVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWASVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVFAGAVVAAVRWRRKSSDRK FT GGSYSQAASSDSAQGSDMSLTACKV" FT exon <301..373 FT /gene="HLA-A" FT /allele="HLA-A*29:02:01:01" FT /number=1 FT intron 374..502 FT /gene="HLA-A" FT /allele="HLA-A*29:02:01:01" FT /number=1 FT exon 503..772 FT /gene="HLA-A" FT /allele="HLA-A*29:02:01:01" FT /number=2 FT intron 773..1013 FT /gene="HLA-A" FT /allele="HLA-A*29:02:01:01" FT /number=2 FT exon 1014..1289 FT /gene="HLA-A" FT /allele="HLA-A*29:02:01:01" FT /number=3 FT intron 1290..1889 FT /gene="HLA-A" FT /allele="HLA-A*29:02:01:01" FT /number=3 FT exon 1890..2165 FT /gene="HLA-A" FT /allele="HLA-A*29:02:01:01" FT /number=4 FT intron 2166..2264 FT /gene="HLA-A" FT /allele="HLA-A*29:02:01:01" FT /number=4 FT exon 2265..2381 FT /gene="HLA-A" FT /allele="HLA-A*29:02:01:01" FT /number=5 FT intron 2382..2821 FT /gene="HLA-A" FT /allele="HLA-A*29:02:01:01" FT /number=5 FT exon 2822..2854 FT /gene="HLA-A" FT /allele="HLA-A*29:02:01:01" FT /number=6 FT intron 2855..2996 FT /gene="HLA-A" FT /allele="HLA-A*29:02:01:01" FT /number=6 FT exon 2997..3044 FT /gene="HLA-A" FT /allele="HLA-A*29:02:01:01" FT /number=7 FT intron 3045..3213 FT /gene="HLA-A" FT /allele="HLA-A*29:02:01:01" FT /number=7 FT exon 3214..>3218 FT /gene="HLA-A" FT /allele="HLA-A*29:02:01:01" FT /number=8 XX SQ Sequence 3315 BP; 625 A; 952 C; 1028 G; 710 T; 0 other; caggagcaga ggggtcaggg cgaagtccca gggccccagg cgtggctctc agggtctcag 60 gccccgaagg cggtgtatgg attggggagt cccagccttg gggattcccc aactccgcag 120 tttcttttct ccctctgcca acctatgtag ggtccttctt cctggatact cacgacgcgg 180 acccagttct cactcccatt gggtgtcggg tttccagaga agccaatcag tgtcgtcgcg 240 gtcgcggttc taaagtccgc acgcacccac cgggactcag attctcccca gacgccgagg 300 atggccgtca tggcgccccg aaccctcctc ctgctactct tgggggccct ggccctgacc 360 cagacctggg cgggtgagtg cggggtcgtg gggaaaccgc ctctgcgggg agaagcaagg 420 ggcccgcccg gcggggacgc aggacccggg tagccgcgcc gggaggaggg tcgggtgggt 480 ctcagccact cctcgccccc aggctcccac tccatgaggt atttcaccac atccgtgtcc 540 cggcccggcc gcggggagcc ccgcttcatc gccgtgggct acgtggacga cacgcagttc 600 gtgcggtttg acagcgacgc cgcgagccag aggatggagc cgcgggcacc gtggatagag 660 caggaggggc cggagtattg ggacctgcag acacggaatg tgaaggccca gtcacagact 720 gaccgagcga acctggggac cctgcgcggc tactacaacc agagcgaggc cggtgagtga 780 ccccggcccg gggcgcaggt cacgacctct catcccccac ggacgggccg ggtcgcccac 840 agtctccggg tccgagatcc accccgaagc cgcgggaccc cgagaccctt gccccgggag 900 aggcccaggc gcctttaccc ggtttcattt tcagtttagg ccaaaaatcc ccccgggttg 960 gtcggggccg gacggggctc gggggactgg gctgaccgtg gggtcggggc caggttctca 1020 caccatccag atgatgtatg gctgcgacgt ggggtcggac gggcgcttcc tccgcgggta 1080 ccggcaggac gcctacgacg gcaaggatta catcgccttg aacgaggacc tgcgctcttg 1140 gaccgcggcg gacatggcgg ctcagatcac ccagcgcaag tgggaggcgg cccgtgtggc 1200 ggagcagttg agagcctacc tggagggcac gtgcgtggag tggctccgca gatacctgga 1260 gaacgggaag gagacgctgc agcgcacggg taccgggggc cacggggcgc ctccctgatc 1320 gcctgtagat ctcccgggct ggcctcccac aaggagggga gacaattggg accaacacta 1380 gaatatcgcc ctccctctgg tcctgaggga gaggaatcct cctgggtttc cagatcctgt 1440 accagagagt gactctgagg ttccgccctg ctctctgaca caattaaggg ataaaatctc 1500 tgaaggaatg acgggaagac gatccctcga atactgatga gtggttccct ttgacacaca 1560 ccggcagcag ccttgggccc gtgacttttc ctctcaggcc ttgttctctg cttcacactc 1620 aatgtgtgtg ggggtctgag tccagcactt ctgagtccct cagcctccac tcaggtcagg 1680 accagaagtc gctgttccct cttcagggac tagaattttc cacggaatag gagattatcc 1740 caggtgcctg tgtccaggct ggtgtctggg ttctgtgctc ccttccccat cccaggtgtc 1800 ctgtccattc tcaagatagc cacatgtgtg ctggaggagt gtcccatgac agatgcaaaa 1860 tgcctgaatg ttctgactct tcctgacaga cgcccccaag acgcatatga ctcaccacgc 1920 tgtctctgac catgaggcca ccctgaggtg ctgggccctg agcttctacc ctgcggagat 1980 cacactgacc tggcagcggg atggggagga ccagacccag gacacggagc ttgtggagac 2040 caggcctgca ggggatggaa ccttccagaa gtgggcgtct gtggtggtgc cttctggaca 2100 ggagcagaga tacacctgcc atgtgcagca tgagggtctg cccaagcccc tcaccctgag 2160 atggggtaag gagggagatg ggggtgtcat gtcttttagg gaaagcagga gcctctctga 2220 cctttagcag ggtcagggcc cctcaccttc ccctcttttc ccagagccgt cttcccagcc 2280 caccatcccc atcgtgggca tcattgctgg cctagttctc tttggagctg tgttcgctgg 2340 agctgtggtc gctgctgtga ggtggaggag gaagagctca ggtggggtga agggatgaag 2400 ggtgggtctg agatttcttg tctcactgag ggttccaaga cccaggtaga agtgtgccct 2460 gcctcgttac tgggaagcac catccacaat tatgggccta cccagcctgg gccctgtgtg 2520 ccagcactta ctcttttgta aagcacctgt taaaatgaag gacagattta tcaccttgat 2580 tacggcggtg atgggacctg atcccagcag tcacaagtca caggggaagg tccctgagga 2640 ccttcaggag ggcggttggt ccaggaccca cacctgcttt cttcatgttt cctgatcccg 2700 ccctgggtct gcagtcacac atttctggaa acttctctga ggtccaagac ttggaggttc 2760 ctctaggacc ttaaggccct ggctcctttc tggtatctca caggacattt tcttcccaca 2820 gatagaaaag gagggagcta ctctcaggct gcaagtaagt atgaaggagg ctgatgcctg 2880 aggtccttgg gatattgtgt ttgggagccc gtgggggagc tcacccaccc cacaattcct 2940 cctctagcca catcttctgt gggatctgac caggttctgt ttttgtccta ccccaggcag 3000 tgacagtgcc cagggctctg atatgtctct cacagcttgt aaaggtgaga gcctggaggg 3060 cctgatgtgt gttgggtgtt gggcggaaca gtggacgcag ctgtgctatg gggtttcttt 3120 gcattggatg tattgagcat gcgatgggct gtttaaagtg tgactcctca ctgtgacaga 3180 tacgaatttg ttcatgaata tttttttcta tagtgtgaga cagctgcctt gtgtgggact 3240 gagaggcaag atttgttcct gcccttccct ttgtgacttg aagaaccctg actttgtttc 3300 tgcaaaggca cctgc 3315 // ID LN877350; SV 2; linear; genomic DNA; STD; HUM; 3354 BP. XX AC LN877350; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*07:18 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3354 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; cad7849e6c03beb92f84449924205b66. DR IMGT/HLA; HLA-C*07:18:01:01; HLA01672. XX FH Key Location/Qualifiers FH FT source 1..3354 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300127" FT /db_xref="taxon:9606" FT CDS join(281..353,484..753,1004..1279,1867..2142,2267..2386, FT 2827..2859,2967..3014,3179..3183) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*07:18" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q85ZX8" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q85ZX8" FT /protein_id="CUA55093.1" FT /translation="MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQNYKRQAQADRVSLRN FT LRGYYNQSEDGSHTLQRMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA FT AQITQRKLEAARAAEQLRAYLEGTCVEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY FT TCHMQHEGLQEPLTLSWEPSSQPTIPIMGIVAGLAVLVVLAVLGAVVTAMMCRRKSSGG FT KGGSCSQVACSNSAQGSDESLITCKA" FT exon <281..353 FT /gene="HLA-C" FT /allele="HLA-C*07:18" FT /number=1 FT intron 354..483 FT /gene="HLA-C" FT /allele="HLA-C*07:18" FT /number=1 FT exon 484..753 FT /gene="HLA-C" FT /allele="HLA-C*07:18" FT /number=2 FT intron 754..1003 FT /gene="HLA-C" FT /allele="HLA-C*07:18" FT /number=2 FT exon 1004..1279 FT /gene="HLA-C" FT /allele="HLA-C*07:18" FT /number=3 FT intron 1280..1866 FT /gene="HLA-C" FT /allele="HLA-C*07:18" FT /number=3 FT exon 1867..2142 FT /gene="HLA-C" FT /allele="HLA-C*07:18" FT /number=4 FT intron 2143..2266 FT /gene="HLA-C" FT /allele="HLA-C*07:18" FT /number=4 FT exon 2267..2386 FT /gene="HLA-C" FT /allele="HLA-C*07:18" FT /number=5 FT intron 2387..2826 FT /gene="HLA-C" FT /allele="HLA-C*07:18" FT /number=5 FT exon 2827..2859 FT /gene="HLA-C" FT /allele="HLA-C*07:18" FT /number=6 FT intron 2860..2966 FT /gene="HLA-C" FT /allele="HLA-C*07:18" FT /number=6 FT exon 2967..3014 FT /gene="HLA-C" FT /allele="HLA-C*07:18" FT /number=7 FT intron 3015..3178 FT /gene="HLA-C" FT /allele="HLA-C*07:18" FT /number=7 FT exon 3179..>3183 FT /gene="HLA-C" FT /allele="HLA-C*07:18" FT /number=8 XX SQ Sequence 3354 BP; 621 A; 992 C; 1042 G; 699 T; 0 other; gatcaggacg aagtcccagg tcccgggcgg ggctctcagg gtctcaggct ccaagggccg 60 tgtctgcatt ggggaggcgc cgcgttgggg attctccact cccctgagtt tcacttctcc 120 caacctgcgt cgggtccttc ttcctgaata ctcatgacgc gtccccaatt cccactccca 180 ttgggtgtcg ggttctagag aagccaatca gcgtctccgc agtcccggtt ctaaagtccc 240 cagtcaccca cccggactca cattctcccc agaggccgag atgcgggtca tggcgccccg 300 agccctcctc ctgctgctct cgggaggcct ggccctgacc gagacctggg cctgtgagtg 360 cggggttggg agggaagcgg cctctgcgga gaggagcgag gggcccgccc ggcgagggcg 420 caggacccgg ggagccgcgc agggaggtgg gtcgggcggg tctcagcccc tcctcgcccc 480 caggctccca ctccatgagg tatttcgaca ccgccgtgtc ccggcccggc cgcggagagc 540 cccgcttcat ctcagtgggc tacgtggacg acacgcagtt cgtgcggttc gacagcgacg 600 ccgcgagtcc gagaggggag ccgcgggcgc cgtgggtgga gcaggagggg ccggagtatt 660 gggaccggga gacacagaac tacaagcgcc aggcacaggc tgaccgagtg agcctgcgga 720 acctgcgcgg ctactacaac cagagcgagg acggtgagtg accccggccc ggggcgcagg 780 tcacgacccc tccccatccc ccacggacgg cccgggtcgc cccgagtctc cccgtctgag 840 atccacccca aggtggatct gcggaacccg cccagaccct cgaccggaga gagccccagt 900 cgcctttacc cggtttcatt ttcggtttag gccaaaatcc ccgcgggttg gtcggggcgg 960 ggcggggctc gggggactgg gctgaccgcg ggggcggggc cagggtctca caccctccag 1020 aggatgtatg gctgcgacct ggggcccgac gggcgcctcc tccgcgggta tgaccagtcc 1080 gcctacgacg gcaaggatta catcgccctg aacgaggacc tgcgctcctg gaccgccgcg 1140 gacaccgcgg ctcagatcac ccagcgcaag ttggaggcgg cccgtgcggc ggagcagctg 1200 agagcctacc tggagggcac gtgcgtggag tggctccgca gatacctgga gaacgggaag 1260 gagacgctgc agcgcgcagg taccaggggc agtggggagc cttccccatc tcctatagat 1320 ctcccgggat ggcctcccac gaggagggga ggaaaatggg atcagcactg gaatatcgcc 1380 ctcccttgaa tggagaatgg catgagtttt cctgagtttc ctctgagggc cccctctgct 1440 ctctaggaca attaagggat gaagtctctg aggaaatgga ggggaagaca gtccctggaa 1500 tactgatcag gggtctcctt tgaccacttt gaccactgca gcagctgtgg tcaggctgct 1560 gacctttctc tcaggccttg ttctctgcct cacactcaat gtgtctgaag gtttgattcc 1620 agcttttctg agtcctgcag cctccactca ggtcaggacc agaagtcgct gttcctccct 1680 cagagactag aactttccaa tgaataggag attatcccag gtgcctgtgt ccaggctggc 1740 gtctgggttc tgtgccgcct tccccacccc aggtgtcctg tccattctca ggatggtcac 1800 atgggcgctg ctggagtgtc ccaagagaga tgcaaagtgt ctgaattttc tgactcttcc 1860 cgtcagaacc cccaaagaca cacgtgaccc accaccccct ctctgaccat gaggccaccc 1920 tgaggtgctg ggccctgggc ttctaccctg cggagatcac actgacctgg cagcgggatg 1980 gggaggacca gacccaggac accgagcttg tggagaccag gccagcagga gatggaacct 2040 tccagaagtg ggcagctgtg gtggtgcctt ctggacaaga gcagagatac acgtgccata 2100 tgcagcacga ggggctgcaa gagcccctca ccctgagctg gggtaaggag gggaatgggg 2160 ggtcacatct cttatcagag aaagcagaag tccttctgga gcccttcagc cgggtcaggg 2220 ctgaggcttg ggggtcaggg cccctcacct tctcctcttt tcccagagcc atcttcccag 2280 cccaccatcc ccatcatggg catcgttgct ggcctggctg tcctggttgt cctagctgtc 2340 cttggagctg tggtcaccgc tatgatgtgt aggaggaaga gctcaggtag ggaaggggtg 2400 aagagcgggg tctgggtttt cttgtcccac tgggagtttc aagccccagg tagaagtgtg 2460 ccccgccttg ttactggaag caccatccac acatgggcca tcccagcctg ggaccctgtg 2520 tgccagcact tactcttttg tgaagcacat gtgacaatga aggacggatg tatcaccttg 2580 atgattatgg tgttggggtc ctgattccag cattcatgag tcaggggaag gtccctgcta 2640 aggacagacc ttaggagggc agttggtcca gaacccacaa ctgctttccc catgtttcct 2700 gatcctgccc tgggtctgca gtcgtagttc tggaaacttc tcttgggtcc aagactagga 2760 ggttccccta agatcacatg gccctgcctc ctcccagtcc cctcataggg cattttcttc 2820 ccacaggtgg aaaaggaggg agctgctctc aggttgcgtg taagtgatgg cggcgggcgt 2880 gtggaggagc tcacctactc cataattcct cttgtcccac atctcctgcg ggctctgacc 2940 aggtcttttt ttttgttcta ccccaggcag caacagtgcc cagggctctg atgagtctct 3000 catcacttgt aaaggtgaga ttctggggag ctgaagtggt cgggggtggg gcagagggaa 3060 aaggcctggg taatggggat tctttgattg ggacgtttcg agtgtgtggt gggccgttca 3120 gagtgtcatc acttaccatg actgacctga atttgttcat gactattgtg ttctgtagcc 3180 tgagacagct gcctgtgtgg gactgagatg caggatttct tcacacctct cctttgtgac 3240 ttcaagagcc tctggcatct ctttctgcaa aggcatctga atgtgtctgc gtccctgtta 3300 gcataatgtg aggaggtgga gagacagccc acccccgtgt ccaccgtgac ccct 3354 // ID LN877351; SV 2; linear; genomic DNA; STD; HUM; 3312 BP. XX AC LN877351; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*39:01:01:03 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3312 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; e3fff974f234f099f66e0fe53a93ef2c. DR IMGT/HLA; HLA-B*39:01:01:03; HLA08053. XX FH Key Location/Qualifiers FH FT source 1..3312 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300127" FT /db_xref="taxon:9606" FT CDS join(285..357,486..755,1002..1277,1850..2125,2219..2335, FT 2777..2809,2916..2959) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*39:01:01:03" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q549W0" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q549W0" FT /protein_id="CUA55094.1" FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQICKTNTQTDRESLRN FT LRGYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHNQFAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRTYLEGTCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*39:01:01:03" FT /number=1 FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*39:01:01:03" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*39:01:01:03" FT /number=2 FT intron 756..1001 FT /gene="HLA-B" FT /allele="HLA-B*39:01:01:03" FT /number=2 FT exon 1002..1277 FT /gene="HLA-B" FT /allele="HLA-B*39:01:01:03" FT /number=3 FT intron 1278..1849 FT /gene="HLA-B" FT /allele="HLA-B*39:01:01:03" FT /number=3 FT exon 1850..2125 FT /gene="HLA-B" FT /allele="HLA-B*39:01:01:03" FT /number=4 FT intron 2126..2218 FT /gene="HLA-B" FT /allele="HLA-B*39:01:01:03" FT /number=4 FT exon 2219..2335 FT /gene="HLA-B" FT /allele="HLA-B*39:01:01:03" FT /number=5 FT intron 2336..2776 FT /gene="HLA-B" FT /allele="HLA-B*39:01:01:03" FT /number=5 FT exon 2777..2809 FT /gene="HLA-B" FT /allele="HLA-B*39:01:01:03" FT /number=6 FT intron 2810..2915 FT /gene="HLA-B" FT /allele="HLA-B*39:01:01:03" FT /number=6 FT exon 2916..>2959 FT /gene="HLA-B" FT /allele="HLA-B*39:01:01:03" FT /number=7 XX SQ Sequence 3312 BP; 621 A; 965 C; 1036 G; 690 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccctgagtt tcacttcttc 120 tcccaacttg tgtcgggtcc ttcttccagg atactcgtga cgcatcccca cttcccactc 180 ccattgggtg tcggatatct agagaagcca atcagcgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagagtct cctcagacgc cgagatgctg gtcatggcgc 300 cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc gggagggaaa tggcctctgc cgggaggagc gaggggaccg caggcggggg 420 cgcaggacct gaggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcta cacctccgtg tcccggcccg gccgcgggga 540 gccccgcttc atctcagtgg gctacgtgga cgacacgcag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggaata 660 ttgggaccgg aacacacaga tctgcaagac caacacacag actgaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg gggacggggc tgaccgcggg gccggggcca gggtctcaca ccctccagag 1020 gatgtacggc tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcata accagttcgc 1080 ctacgacggc aaggattaca tcgccctgaa cgaggacctg agctcctgga ccgcggcgga 1140 caccgcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcagctgag 1200 aacctacctg gagggcacgt gcgtggagtg gctccgcaga tacctggaga acgggaagga 1260 gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320 ccggggatgg cctccaacga gaagaagagg aaaatgggat cagcgctaga atgtcgccct 1380 cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440 ctaggacaat taagggatga cgtctctgag gaaatggagg ggaagacagt ccctagaata 1500 ctgatcaggg gtcccctttg acccctgcag cagccttggg aaccatgact tttcctctca 1560 ggccttgttc tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt 1620 cactttacct ccactcagat caggagcaga agtctctgtt ccccgctcag agactcgaac 1680 tttccaatga atagattatc ccaggtgcct gcgtccaggc tggtgtctgg gttctgtgcc 1740 ccttccccac cccaggtgtc ctgtccattc tcaggctggt cacatgggtg gtcctagggt 1800 gtcccatgag agatgcaaag cgcctgaatt ttctgactct tcccatcaga ccccccaaag 1860 acacatgtga cccaccaccc catctctgac catgaggcca ccctgaggtg ctgggccctg 1920 ggcttctacc ctgcggagat cacactgacc tggcagcggg atggcgagga ccaaactcag 1980 gacaccgagc ttgtggagac cagaccagca ggagacagaa ccttccagaa gtgggcagct 2040 gtggtggtgc cttctggaga agagcagaga tacacatgcc atgtacagca tgaggggctg 2100 ccgaagcccc tcaccctgag atggggtaag gagggggatg aggggtcata tctcttctca 2160 gggaaagcag gagcccttca gcagggtcag ggcccctcat cttcccctcc tttcccagag 2220 ccatcttccc agtccaccgt ccccatcgtg ggcattgttg ctggcctggc tgtcctagca 2280 gttgtggtca tcggagctgt ggtcgctgct gtgatgtgta ggaggaagag ttcaggtagg 2340 gaaggggtga ggggtggggt ctgggttttc ttgtcccact gggggtttca agccccaggt 2400 agaagtgttc cctgcatcat tactgggaag cagcatgcac acaggggcta acgcagcctg 2460 ggaccctgtg tgccagcact tactcttttg tgcagcacat gtgacaatga aggacggatg 2520 tatcaccttg atggttgtgg tgttggggtc ctgattccag cattcatgag tcaggggaag 2580 gtccctgcta aggacagacc ttaggagggc agttggtcca ggacccacac ttgctttcct 2640 cgtgtttcct gatcctgccc tgggtctgta gtcatacttc tggaaattcc ttttgggtcc 2700 aagactagga ggttcctcta agatctcatg gccctgcttc ctcccagtcc cctcacagga 2760 cattttcttc ccacaggtgg aaaaggaggg agctactctc aggctgcgtg taagtggtgg 2820 gggtgggagt gtggaggagc tcacccaccc cataattcct cctgtcccac gtctcctgtg 2880 ggctctgacc aggtcctgtt tttgttctac tccagccagc gacagtgccc agggctctga 2940 tgtgtctctc acagcttgaa aaggtgagat tcttggggtc tagagtgggc gggggggcgg 3000 ggagggggca gaggggaaag gcctgggtaa tggagattct ttgattggga tgtttcgcgt 3060 gtgtgatggg ctgttcagag tgtcatcact taccatgact aaccagaatt tgttcatgac 3120 tgttgttttc tgtagcctga gacagctgtc ttgtgaggga ctgagatgca ggatttcttc 3180 acgcctcccc tttgtgactt caagagcctc tggcatctct ttctgcaaag gcacctgaat 3240 gtgtctgcgt ccctgttagc ataatgtgag gaggtggaga gacagcccac ccttgtgtcc 3300 actgtgaccc ct 3312 // ID LN877352; SV 2; linear; genomic DNA; STD; HUM; 3349 BP. XX AC LN877352; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*04:01:01new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3349 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 655532e23d89c98d6c3ad0544edcdba2. DR IMGT/HLA; HLA-C*04:01:01:06; HLA13527. XX FH Key Location/Qualifiers FH FT source 1..3349 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300128" FT /db_xref="taxon:9606" FT CDS join(284..356,487..756,1003..1278,1866..2141,2263..2382, FT 2822..2854,2962..3009,3174..3178) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*04:01:01new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q5D1W8" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q5D1W8" FT /protein_id="CUA55095.1" FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFSTSVSWPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPREPWVEQEGPEYWDRETQKYKRQAQADRVNLRK FT LRGYYNQSEDGSHTLQRMFGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWKPSSQPTIPIVGIVAGLAVLAVLAVLGAMVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT exon <284..356 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=1 FT intron 357..486 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=1 FT exon 487..756 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=2 FT intron 757..1002 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=2 FT exon 1003..1278 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=3 FT intron 1279..1865 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=3 FT exon 1866..2141 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=4 FT intron 2142..2262 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=4 FT exon 2263..2382 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=5 FT intron 2383..2821 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=5 FT exon 2822..2854 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=6 FT intron 2855..2961 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=6 FT exon 2962..3009 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=7 FT intron 3010..3173 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=7 FT exon 3174..>3178 FT /gene="HLA-C" FT /allele="HLA-C*04:01new" FT /number=8 XX SQ Sequence 3349 BP; 627 A; 974 C; 1046 G; 702 T; 0 other; aatcaggacg aagtcccagg tcccgggcgg ggctctcagg gtctcaggct ccaagggccg 60 tgtctgcact ggggaggcgc cgcgttgggg attctccact cccctgagtt tcacttcttc 120 tcccaacctg cgtcgggtcc ttcttcctga atactcatga cgcgtcccca attcccactc 180 ccattgggtg tcgggttcta gagaagccaa tcagcgtctc cgcagtcccg gttctaaagt 240 ccccagtcac ccacccggac tcagattctc cccagacgcc gagatgcggg tcatggcgcc 300 ccgaaccctc atcctgctgc tctcgggagc cctggccctg accgagacct gggccggtga 360 gtgcggggtt gggagggaaa cggcctctgg ggagaggagc gaggggcccg cccggcgagg 420 gcgcaggacc cggggagccg cgcagggagg agggtcgggc gggtctcagc cactcctcgt 480 ccccaggctc ccactccatg aggtatttct ccacatccgt gtcctggccc ggccgcgggg 540 agccccgctt catcgcagtg ggctacgtgg acgacacgca gttcgtgcgg ttcgacagcg 600 acgccgcgag tccaagaggg gagccgcggg agccgtgggt ggagcaggag gggccggagt 660 attgggaccg ggagacacag aagtacaagc gccaggcaca ggctgaccga gtgaacctgc 720 ggaaactgcg cggctactac aaccagagcg aggacggtga gtgaccccgg cccggggcgc 780 aggtcacgac ccctccccat cccccacgga cggcccgggt cgccccgagt ctccccgtct 840 gagatccacc ccgaggctgc ggaacccgcc cagaccctcg accggagaga gccccagtca 900 cctttacccg gtttcatttt cagtttaggc caaaatcccc gcgggttggt cgggactggg 960 gcggggctcg ggggaccggg ctgaccacgg gggcggggcc agggtctcac accctccaga 1020 ggatgtttgg ctgcgacctg gggccggacg ggcgcctcct ccgcgggtat aaccagttcg 1080 cctacgacgg caaggattac atcgccctga acgaggatct gcgctcctgg accgccgcgg 1140 acacggcggc tcagatcacc cagcgcaagt gggaggcggc ccgtgaggcg gagcagcgga 1200 gagcctacct ggagggcacg tgcgtggagt ggctccgcag atacctggag aacgggaagg 1260 agacgctgca gcgcgcgggt accaggggca gtggggagcc ttccccatct cccgtagatc 1320 tcccgggatg gcctcccacg aggaggggag gaaaatggga tcagcgctag aatatcgccc 1380 tcccttgaat ggagaatggg atgagttttc ctgagtttcc tctgagggcc ccctctgctc 1440 tctaggacaa ttaagggatg aagtccttga ggaaatggag gggaagacag tccctggaat 1500 actgatcagg ggtccccttt gaccactttg accactgcag cagctgtggt caggctgctg 1560 acctttctct caggccttgt tctctgcctg acgctcaatg tgtttgaagg tttgattcca 1620 gcttttctga gtccttcggc ctccactcag gtcaggacca gaagtcgctg ttcctccctc 1680 agagactaga actttccaat gaataggaga ttatcccagg tgcctgtgtc caggctggcg 1740 tctgggttct gtgccccctt ccccacccca ggtgtcctgt ccattctcag gatggtcaca 1800 tgggcgctgt tggagtgtcg caagagagat acaaagtgtc tgaattttct gactcttccc 1860 atcagaacac ccaaagacac acgtgaccca ccatcccgtc tctgaccatg aggccaccct 1920 gaggtgctgg gccctgggct tctaccctgc ggagatcaca ctgacctggc agtgggatgg 1980 ggaggaccaa actcaggaca ccgagcttgt ggagaccagg ccagcaggag atggaacctt 2040 ccagaagtgg gcagctgtgg tggtgccttc tggagaagag cagagataca cgtgccatgt 2100 tcagcacgag gggctgccgg agcccctcac cctgagatgg agtaaggagg gggatgaggg 2160 gtgatgtgtc ttctcaggga aagcagaagt cctggagccc ttcagccggg tcagggctga 2220 ggcttggagg tcagggcccc tcaccttccc ctcctttccc agagccgtct tcccagccca 2280 ccatccccat cgtgggcatc gttgctggcc tggctgtcct ggctgtccta gctgtcctag 2340 gagctatggt ggctgttgtg atgtgtagga ggaagagctc aggtagggaa ggggtgagga 2400 gtggggtctg ggttttcttg ttccactggg agtttcaagc cccaggtaga agtgtgcccc 2460 acctcgttac tggaagcacc atccacacgt gggccatccc agcctgggac cctgtgtgcc 2520 agcacttact ctgttgtgaa gcacatgaca atgaaggaca gatgtatcac cttgatgatt 2580 atggtgttgg ggtccttgat tccagcattc atgagtcagg ggaaggtccc tgctaaggac 2640 agaccttagg agggcagttg cttcagaacc cacagctgct ttccccgtgt ttcctgatcc 2700 tgccctgggt ctgcagtcat agttctggaa acttctcttg ggtccaagac taggaggttc 2760 ccctaagatc gcatggccct gcctcctccc tgtcccctca cagggcattt tcttcccaca 2820 ggtggaaaag gagggagctg ctctcaggct gcgtgtaagt gatggcggtg ggcgtgtgga 2880 ggagctcacc caccccataa ttcctcttgt cccacatctc ctgcgggctc tgaccaggtc 2940 tttttttttg ttctacccca gccagcaaca gtgcccaggg ctctgatgag tctctcatcg 3000 cttgtaaagg tgagattctg gggagctgaa gtggtcgggg gtggggcaga gggaaaaggc 3060 ctaggtaatg gggatccttt gattgggacg tttcgaatgt gtggtgagct gttcagagtg 3120 tcatcactta ccatgactga cctgaatttg ttcatgacta ttgtgttctg tagcctgaga 3180 cagctgcctg tgtgggactg agatgcagga tttcttcaca cctctccttt gtgacttcaa 3240 gagcctctgg catctctttc tgcaaaggca tctgaatgtg tctgcgttcc tgttagcata 3300 atgtgaggag gtggagagac agcccacccc cgtgtccacc gtgacccct 3349 // ID LN877354; SV 2; linear; genomic DNA; STD; HUM; 3322 BP. XX AC LN877354; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*08:01:01ext XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3322 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 4ed3fc74f9934e922cc8345b00459784. DR Ensembl-Gn; ENSG00000223532; homo_sapiens. DR Ensembl-Tr; ENST00000425848; homo_sapiens. DR IMGT/HLA; HLA-B*08:01:01:01; HLA00146. XX FH Key Location/Qualifiers FH FT source 1..3322 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300128" FT /db_xref="taxon:9606" FT CDS join(285..357,486..755,1002..1277,1850..2125,2219..2335, FT 2777..2809,2916..2959) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*08:01:01ext" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q5SS57" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q5SS57" FT /protein_id="CUA55097.1" FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFDTAMSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIFKTNTQTDRESLRN FT LRGYYNQSEAGSHTLQSMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAARVAEQDRAYLEGTCVEWLRRYLENGKDTLERADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*08:01:01ext" FT /number=1 FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*08:01:01ext" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*08:01:01ext" FT /number=2 FT intron 756..1001 FT /gene="HLA-B" FT /allele="HLA-B*08:01:01ext" FT /number=2 FT exon 1002..1277 FT /gene="HLA-B" FT /allele="HLA-B*08:01:01ext" FT /number=3 FT intron 1278..1849 FT /gene="HLA-B" FT /allele="HLA-B*08:01:01ext" FT /number=3 FT exon 1850..2125 FT /gene="HLA-B" FT /allele="HLA-B*08:01:01ext" FT /number=4 FT intron 2126..2218 FT /gene="HLA-B" FT /allele="HLA-B*08:01:01ext" FT /number=4 FT exon 2219..2335 FT /gene="HLA-B" FT /allele="HLA-B*08:01:01ext" FT /number=5 FT intron 2336..2776 FT /gene="HLA-B" FT /allele="HLA-B*08:01:01ext" FT /number=5 FT exon 2777..2809 FT /gene="HLA-B" FT /allele="HLA-B*08:01:01ext" FT /number=6 FT intron 2810..2915 FT /gene="HLA-B" FT /allele="HLA-B*08:01:01ext" FT /number=6 FT exon 2916..>2959 FT /gene="HLA-B" FT /allele="HLA-B*08:01:01ext" FT /number=7 XX SQ Sequence 3322 BP; 612 A; 968 C; 1049 G; 693 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccctgagtt tcacttcttc 120 tcccaacttg tgtcgggtcc ttcttccagg atactcgtga cgcatcccca cttcccactc 180 ccattgggtg tcggatatct agagaagcca atcagcgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagagtct cctcagacgc cgagatgctg gtcatggcgc 300 cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc gggagggaaa tggcctctgc cgggaggagc gaggggaccg caggcggggg 420 cgcaggacct gaggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcga caccgccatg tcccggcccg gccgcgggga 540 gccccgcttc atctcagtgg gctacgtgga cgacacgcag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggagta 660 ttgggaccgg aacacacaga tcttcaagac caacacacag actgaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacggacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg gggacggggc tgaccgcggg gccggggcca gggtctcaca ccctccagag 1020 catgtacggc tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcata accagtacgc 1080 ctacgacggc aaggattaca tcgccctgaa cgaggacctg cgctcctgga ccgcggcgga 1140 caccgcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcaggacag 1200 agcctacctg gagggcacgt gcgtggagtg gctccgcaga tacctggaga acgggaagga 1260 cacgctggag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320 ccggggatgg cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct 1380 cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440 ctagacaatt aagggatgac gtctctgagg aaatggaggg gaagacagtc cctagaatac 1500 tgatcagggg tcccctttga cccctgcagc agccttggga accgtgactt ttcctctcag 1560 gccttgttct ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc 1620 actttacctc cactcagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact 1680 ttccaatgaa taggagatta tcccaggtgc ctgcatccgc tggtgtctgg gttctgtgcc 1740 ccttccccac cccaggtgtc ctgtccattc tcaggctggt cacatgggtg gtcctagggt 1800 gtgccatgag agatgcaaag cgcctgaatt ttctgactct tcccatcaga ccccccaaag 1860 acacacgtga cccaccaccc catctctgac catgaggcca ccctgaggtg ctgggccctg 1920 ggcttctacc ctgcggagat cacactgacc tggcagcggg atggcgagga ccaaactcag 1980 gacactgagc ttgtggagac cagaccagca ggagatagaa ccttccagaa gtgggcagct 2040 gtggtggtgc cttctggaga agagcagaga tacacatgcc atgtacagca tgaggggctg 2100 ccgaagcccc tcaccctgag atggggtaag gagggggatg aggggtcata tctcttctca 2160 gggaaagcag gagcccttca gcagggtcag ggcccctcat cttcccctcc tttcccagag 2220 ccgtcttccc agtccaccgt ccccatcgtg ggcattgttg ctggcctggc tgtcctagca 2280 gttgtggtca tcggagctgt ggtcgctgct gtgatgtgta ggaggaagag ctcaggtagg 2340 gaaggggtga ggggtggggt ctgggttttc ttgtcccact gggggtttca agccccaggt 2400 agaagtgttc cctgcctcat tactgggatg cagcatccac acaggggcta acgcagcctg 2460 ggaccctgtg tgccagcact tactcttttg tgcagcacat gtgacaatga aggacggatg 2520 tatcaccttg gtggttgtgg tgttggggtc ctgattccag cattcatgag tcaggggaag 2580 gtccctgcta aggacagacc ttaggagggc agttggtcca ggacccacac ttgctttcct 2640 cgtgtttcct gatcctgcct tgggtctgta gtcatacttc tggaaattcc ttttgggtcc 2700 aagacgagga ggttcctcta agatctcatg gccctgcttc ctcccagtcc cctcacaggg 2760 cattttcttc ccacaggtgg aaaaggaggg agctactctc aggctgcgtg taagtgatgg 2820 gggtgggagt gtggaggagc tcacccaccc cataattcct cctgtcccac gtctcctgcg 2880 ggctctgacc aggtcctgtt tttgttctac tccaggcagc gacagtgccc agggctctga 2940 tgtgtctctc acagcttgaa aaggtgagat tcttggggtc tagagtgggt ggggtggcgg 3000 gtctgggggt gggtggggca gtggggaaag gcctgggtaa tggagattct ttgattggga 3060 tgtttcgcgt gtgtggtggg ctgtttagag tgtcatcact taccatgact aaccagaatt 3120 tgttcatgac tgttgttttc tgtagcctga gacagctgtc ttgtgaggga ctgagatgca 3180 ggatttcttc acgcctcccc tttgtgactt caagagcctc tggcatctct ttctgcaaag 3240 gcacctgaat gtgtctgcgt ccctgttagc ataatgtgag gaggtggaga gacagcccac 3300 ccttgtgtcc actgtgaccc ct 3322 // ID LN877355; SV 2; linear; genomic DNA; STD; HUM; 3299 BP. XX AC LN877355; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-A gene for MHC class I antigen, allele HLA-A*03:02:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3299 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 724fc1b4376867ea0f9b197f5e911cb7. DR IMGT/HLA; HLA-A*03:02:01; HLA00040. XX FH Key Location/Qualifiers FH FT source 1..3299 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300128" FT /db_xref="taxon:9606" FT CDS join(301..373,504..773,1015..1290,1869..2144,2247..2363, FT 2806..2838,2981..3028,3198..3202) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-A" FT /allele="HLA-A*03:02:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:C5IWY0" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:C5IWY0" FT /protein_id="CUA55098.1" FT /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGT FT LRGYYNQSEAGSHTIQIMYGCDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMA FT AQITKRKWEAAHVAEQQRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRK FT GGSYTQAASSDSAQGSDVSLTACKV" FT exon <301..373 FT /gene="HLA-A" FT /allele="HLA-A*03:02:01" FT /number=1 FT intron 374..503 FT /gene="HLA-A" FT /allele="HLA-A*03:02:01" FT /number=1 FT exon 504..773 FT /gene="HLA-A" FT /allele="HLA-A*03:02:01" FT /number=2 FT intron 774..1014 FT /gene="HLA-A" FT /allele="HLA-A*03:02:01" FT /number=2 FT exon 1015..1290 FT /gene="HLA-A" FT /allele="HLA-A*03:02:01" FT /number=3 FT intron 1291..1868 FT /gene="HLA-A" FT /allele="HLA-A*03:02:01" FT /number=3 FT exon 1869..2144 FT /gene="HLA-A" FT /allele="HLA-A*03:02:01" FT /number=4 FT intron 2145..2246 FT /gene="HLA-A" FT /allele="HLA-A*03:02:01" FT /number=4 FT exon 2247..2363 FT /gene="HLA-A" FT /allele="HLA-A*03:02:01" FT /number=5 FT intron 2364..2805 FT /gene="HLA-A" FT /allele="HLA-A*03:02:01" FT /number=5 FT exon 2806..2838 FT /gene="HLA-A" FT /allele="HLA-A*03:02:01" FT /number=6 FT intron 2839..2980 FT /gene="HLA-A" FT /allele="HLA-A*03:02:01" FT /number=6 FT exon 2981..3028 FT /gene="HLA-A" FT /allele="HLA-A*03:02:01" FT /number=7 FT intron 3029..3197 FT /gene="HLA-A" FT /allele="HLA-A*03:02:01" FT /number=7 FT exon 3198..>3202 FT /gene="HLA-A" FT /allele="HLA-A*03:02:01" FT /number=8 XX SQ Sequence 3299 BP; 629 A; 952 C; 1023 G; 695 T; 0 other; caggagcaga ggggtcaggg cgaagtccca gggccccagg cgtggctctc agagtctcag 60 gccccgaagg cggtgtatgg attggggagt cccagccttg gggattcccc aactccgcag 120 tttcttttct ccctctccca acctacgtag ggtccttcat cctggatact cacgacgcgg 180 acccagttct cactcccatt gggtgtcggg tttccagaga agccaatcag tgtcgtcgcg 240 gtcgctgttc taaagcccgc acgcacccac cgggactcag attctcccca gacgccgagg 300 atggccgtca tggcgccccg aaccctcctc ctgctactct cgggggccct ggccctgacc 360 cagacctggg cgggtgagtg cggggtcggg agggaaaccg cctctgcggg gagaagcaag 420 gggccctcct ggcgggggcg caggaccggg ggagccgcgc cgggacgagg gtcgggcagg 480 tctcagccac tgctcgcccc caggctccca ctccatgagg tatttcttca catccgtgtc 540 ccggcccggc cgcggggagc cccgcttcat cgccgtgggc tacgtggacg acacgcagtt 600 cgtgcggttc gacagcgacg ccgcgagcca gaggatggag ccgcgggcgc cgtggataga 660 gcaggagggg ccggagtatt gggaccagga gacacggaat gtgaaggccc agtcacagac 720 tgaccgagtg gacctgggga ccctgcgcgg ctactacaac cagagcgagg ccggtgagtg 780 accccggccg ggggcgcagg tcaggacccc tcatccccca cggacgggcc aggtcgccca 840 cagtctccgg gtccgagatc caccccgaag ccgcgggacc ccgagaccct tgccccggga 900 gaggcccagg cgcctttacc cggtttcatt ttcagtttag gccaaaaatc cccccgggtt 960 ggtcggggct gggcggggct cgggggactg ggctgaccgc ggggtcgggg ccaggttctc 1020 acaccatcca gataatgtat ggctgcgacg tggggtcgga cgggcgcttc ctccgcgggt 1080 accggcagga cgcctacgac ggcaaggatt acatcgccct gaacgaggac ctgcgctctt 1140 ggaccgcggc ggacatggcg gctcagatca ccaagcgcaa gtgggaggcg gcccatgtgg 1200 cggagcagca gagagcctac ctggatggca cgtgcgtgga gtggctccgc agatacctgg 1260 agaacgggaa ggagacgctg cagcgcacgg gtaccagggg ccacggggcg cctccctgat 1320 cgcctgtaga tctcccgggc tggcctccca caaggagggg agacaattgg gaccaacact 1380 agaatatcac cctccctctg gtcctgaggg agaggaatcc tcctgggttc cagatcctgt 1440 accagagagt gactctgagg ttccgccctg ctctctgaca caattaaggg ataaaatctc 1500 tgaaggagtg acgggaagac gatccctcga atactgatga gtggttccct ttgacaccgg 1560 cagcagcctt gggcccgtga cttttcctct caggccttgt tctctgcttc acactcaatg 1620 tgtgtggggg tctgagtcca gcacttctga gtccctcagc ctccactcag gtcaggacca 1680 gaagtcgctg ttcccttctc agggaataga agattatccc aggtgcctgt gtccaggctg 1740 gtgtctgggt tctgtgctct cttccccatc ccgggtgtcc tgtccattct caagatggcc 1800 acatgcgtgc tggtggagtg tcccatgaca gatgcaaaat gcctgaattt tctgactctt 1860 cccgtcagac ccccccaaga cacatatgac ccaccacccc atctctgacc atgaggccac 1920 cctgaggtgc tgggccctgg gcttctaccc tgcggagatc acactgacct ggcagcggga 1980 tggggaggac cagacccagg acacggagct cgtggagacc aggcctgcag gggatggaac 2040 cttccagaag tgggcggctg tggtggtgcc ttctggagag gagcagagat acacctgcca 2100 tgtgcagcat gagggtctgc ccaagcccct caccctgaga tggggtaagg agggagatgg 2160 gggtgtcatg tctcttaggg aaagcaggag cctctctgga gacctttagc agggtcaggg 2220 cccctcacct tcccctcttt tcccagagct gtcttcccag cccaccatcc ccatcgtggg 2280 catcattgct ggcctggttc tccttggagc tgtgatcact ggagctgtgg tcgctgccgt 2340 gatgtggagg aggaagagct caggtggaga aggggtgaag ggtggggtct gagatttctt 2400 gtctcactga gggttccaag ccccagctag aaatgtgccc tgtctcatta ctgggaagca 2460 ccgtccacaa tcatgggcct acccagtctg ggccctgtgt gccagcactt actcttttgt 2520 aaagcacctg ttaaaatgaa ggacagattt atcaccttga ttacggcggt gatgggacct 2580 gatcccagca gtcacaagtc acaggggaag gtccctgagg acagacctca ggagggctat 2640 tggtccagga cccacacctg ctttcttcat gtttcctgat cccgccctgg gtctgcagtc 2700 acacatttct ggaaacttct ctggggtcca agactaggag gttcctctag gaccttaagg 2760 ccctggctcc tttctggtat ctcacaggac attttcttct cacagataga aaaggaggga 2820 gttacactca ggctgcaagt aagtatgaag gaggctgatg cctgaggtcc ttgggatatt 2880 gtgtttggga gcccatgggg gagcccaccc acctcacaat tcctcctcta gccacatctt 2940 ctgtgggatc tgaccaggtt ctgtttttgt tctaccccag gcagtgacag tgcccagggc 3000 tctgatgtgt ccctcacagc ttgtaaaggt gagagcttgg aggacctaat gtgtgttggg 3060 tgttgggcgg aacagtggac acagctgtgc tatggggttt ctttgcattg gatgtattga 3120 gcatgcgatg ggctgtttaa ggtgtgaccc ctcactgtga tggatatgaa tttgttcatg 3180 aatatttttt tctatagtgt gagacagctg ccttgtgtgg gactgagagg caagagttgt 3240 tcctgccctt ccctttgtga cttgaagaac cctgactttg tttctgcaaa ggcacctgc 3299 // ID LN877356; SV 2; linear; genomic DNA; STD; HUM; 3349 BP. XX AC LN877356; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*16:04:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3349 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; aefc6289675459afe38397002b7451c4. DR IMGT/HLA; HLA-C*16:04:01:01; HLA00478. XX FH Key Location/Qualifiers FH FT source 1..3349 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300129" FT /db_xref="taxon:9606" FT CDS join(284..356,487..756,1003..1278,1866..2141,2263..2382, FT 2822..2854,2962..3009,3174..3178) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:C9E8W0" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:C9E8W0" FT /protein_id="CUA55099.1" FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMRYFYTAVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN FT LRGYYNQSEAGSHTLQWMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAARAAEQWRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHLVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT exon <284..356 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=1 FT intron 357..486 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=1 FT exon 487..756 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=2 FT intron 757..1002 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=2 FT exon 1003..1278 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=3 FT intron 1279..1865 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=3 FT exon 1866..2141 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=4 FT intron 2142..2262 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=4 FT exon 2263..2382 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=5 FT intron 2383..2821 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=5 FT exon 2822..2854 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=6 FT intron 2855..2961 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=6 FT exon 2962..3009 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=7 FT intron 3010..3173 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=7 FT exon 3174..>3178 FT /gene="HLA-C" FT /allele="HLA-C*16:04:01" FT /number=8 XX SQ Sequence 3349 BP; 619 A; 985 C; 1045 G; 700 T; 0 other; gatcaggacg aagtcccagg tcccgggcgg ggctctcagg gtctcaggct ccaagggccg 60 tgtctgcact ggggaggcgc cgcgttgagg attctccact cccctgagtt tcacttcttc 120 tcccaacctg cgtcgggtcc ttcttcctga atactcatga cgcgtcccca attcccactc 180 ccattgggtg tcgggttcta gagaagccaa tcagcgtctc cgcagtcccg gttctaaagt 240 ccccagtcac ccacccggac tcggattctc cccagacgcc gagatgcggg tcatggcgcc 300 ccgaaccctc atcctgctgc tctcgggagc cctggccctg accgagacct gggcctgtga 360 gtgcggggtt gggagggaaa cggcctctgc ggagaggagc gaggggcccg cccggcgagg 420 gcgcaggacc cggggagccg cgcagggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccgt gtcccggccc ggccgcggag 540 agccccgctt catcgcagtg ggctacgtgg acgacacgca gttcgtgcgg ttcgacagcg 600 acgccgcgag tccaagaggg gagccgcggg cgccgtgggt ggagcaggag gggccggagt 660 attgggaccg ggagacacag aagtacaagc gccaggcaca gactgaccga gtgagcctgc 720 ggaacctgcg cggctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac ccctccccat cccccacgga cggcccgggt cgccccgagt ctcccggtct 840 gagatccacc ccgaggctgc ggaacccgcc cagaccctcg gccggagaga gccccagtca 900 cctttacccg gtttcatttt cagtttaggc caaaatcccc gcgggttggt cggggctggg 960 gcggggctcg cgggacgggg ctgaccacgg gggcggggcc agggtctcac accctccagt 1020 ggatgtatgg ctgcgacctg gggcccgacg ggcgcctcct ccgcgggtat gaccagtccg 1080 cctacgacgg caaggattac atcgccctga acgaggacct gcgctcctgg accgccgcgg 1140 acacggcggc tcagatcacc cagcgcaagt gggaggcggc ccgtgcggcg gagcagtgga 1200 gagcctacct ggagggcacg tgcgtggagt ggctccgcag atacctggag aacgggaagg 1260 agacgctgca gcgcgcgggt accaggggca gtggggagcc ttccccatct cctgtagatc 1320 tcccgggatg gcctcccacg aggaggggag gaaaatggga tcagcgctag aatatcgccc 1380 tcccttgaat ggagaatggg atgagttttc ctgagtttcc tctgagggcc ccctctgctc 1440 tctaggacaa ttaagggatg aagtccttga ggaaatggag gggaagacag tccctggaat 1500 actgatcagg ggtccccttt gaccactttg accactgcag cagctgtggt caggctgctg 1560 acctttctct caggccttgt tctctgcctc atgctcaatg tgtttgaagg tttgattcca 1620 gcttttctga gttcttcagc ctccactcag gtcaggacca gaagtcgctg ttcctccctc 1680 agagactaga actttccaat gaataggaga ttatcccagg tgcctgtgtc caggctggcg 1740 tctgggttct gtgccccctt ccccacccca ggtgtcctgt ccattctcag gatggtcaca 1800 tgggcgctgt tggagtgtcg caagagagat acaaagtgtc tgaattttct gactcttccc 1860 gtcagaacac ccaaagacac acgtgaccca ccatctcgtc tctgaccatg aggccaccct 1920 gaggtgctgg gccctgggct tctaccctgc ggagatcaca ctgacctggc agcgggatgg 1980 cgaggaccaa actcaggaca ccgagcttgt ggagaccagg ccagcaggag atggaacctt 2040 ccagaagtgg gcagctgtgg tggtgccttc tggagaagag cagagataca cgtgccatgt 2100 gcagcacgag gggctgccgg agcccctcac cctgagatgg ggtaaggagg gggatgaggg 2160 gtcatgtgtc ttctcaggga aagcagaagt cctggagccc ttcagccggg tcagggctga 2220 ggcttggggg tcagggcccc tcaccttccc ctcctttccc agagccatct tcccagccca 2280 ccatccccat cgtgggcatc gttgctggcc tggctgtcct ggctgtccta gctgtcctag 2340 gagctgtggt ggctgttgtt atgtgtagga ggaagagctc aggtagggaa ggggtgagga 2400 gtggggtctg ggttttcttg tcccactggg agtttcaagc cccaggtaga agtgtgcccc 2460 acctcgttac tggaagcacc atccacacat gggccatccc agcctgggac cctgtgtgcc 2520 agcacttact ctgttgtgaa gcacatgaca atgaaggaca gatgtatcac cttgatgatt 2580 atggtgttgg ggtccttgat tccagcattc atgagtcagg ggaaggtccc tgctaaggac 2640 agaccttagg agggcagttg ctccagaacc cacagctgct ttccctgtgt ttcctgatcc 2700 tgccctgggt ctgcagtcat agttctggaa acttctcttg ggtccaagac taggaggttc 2760 ccctaagatc gcatggccct gcctcctccc tgtcccctca cagggcattt tcttcccaca 2820 ggtggaaaag gagggagctg ctctcaggct gcgtgtaagt gatggcagtg ggcgtgtgga 2880 ggagctcacc caccccataa ttcctcttgt cccacatctc ctgcgggctc tgaccaggtc 2940 tttttttttg ttctacccca gccagcaaca gtgcccaggg ctctgatgag tctctcatcg 3000 cttgtaaagg tgagattctg gggagctgaa gtggtcgggg gtggggcaga gggaaaaggc 3060 ctaggtaatg gggatccttt gattgggacg tttcgaatgt gtggtgagct gttcagagtg 3120 tcatcactta ccatgactga cctgaatttg ttcatgacta ttgtgttctg tagcctgaga 3180 cagctgcctg tgtgggactg agatgcagga tttcttcaca cctctccttt gtgacttcaa 3240 gagcctctgg catctctttc tgcaaaggca tctgaatgcg tctgcgttcc tgttagcata 3300 atgtgaggag gtggagagac agcccacccc cgtgtccacc gtgacccct 3349 // ID LN877357; SV 2; linear; genomic DNA; STD; HUM; 3312 BP. XX AC LN877357; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*38:01:01ext XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3312 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 205bcc2884f405305b551c58c25d7232. DR IMGT/HLA; HLA-B*38:01:01:01; HLA00267. XX FH Key Location/Qualifiers FH FT source 1..3312 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300129" FT /db_xref="taxon:9606" FT CDS join(285..357,486..755,1002..1277,1850..2125,2219..2335, FT 2777..2809,2916..2959) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*38:01:01ext" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:E5FQ58" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:E5FQ58" FT /protein_id="CUA55100.1" FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQICKTNTQTYRENLRI FT ALRYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHNQFAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRTYLEGTCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*38:01:01ext" FT /number=1 FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*38:01:01ext" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*38:01:01ext" FT /number=2 FT intron 756..1001 FT /gene="HLA-B" FT /allele="HLA-B*38:01:01ext" FT /number=2 FT exon 1002..1277 FT /gene="HLA-B" FT /allele="HLA-B*38:01:01ext" FT /number=3 FT intron 1278..1849 FT /gene="HLA-B" FT /allele="HLA-B*38:01:01ext" FT /number=3 FT exon 1850..2125 FT /gene="HLA-B" FT /allele="HLA-B*38:01:01ext" FT /number=4 FT intron 2126..2218 FT /gene="HLA-B" FT /allele="HLA-B*38:01:01ext" FT /number=4 FT exon 2219..2335 FT /gene="HLA-B" FT /allele="HLA-B*38:01:01ext" FT /number=5 FT intron 2336..2776 FT /gene="HLA-B" FT /allele="HLA-B*38:01:01ext" FT /number=5 FT exon 2777..2809 FT /gene="HLA-B" FT /allele="HLA-B*38:01:01ext" FT /number=6 FT intron 2810..2915 FT /gene="HLA-B" FT /allele="HLA-B*38:01:01ext" FT /number=6 FT exon 2916..>2959 FT /gene="HLA-B" FT /allele="HLA-B*38:01:01ext" FT /number=7 XX SQ Sequence 3312 BP; 621 A; 966 C; 1033 G; 692 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccctgagtt tcacttcttc 120 tcccaacttg tgtcgggtcc ttcttccagg atactcgtga cgcatcccca cttcccactc 180 ccattgggtg tcggatatct agagaagcca atcagcgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagagtct cctcagacgc cgagatgctg gtcatggcgc 300 cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc gggagggaaa tggcctctgc cgggaggagc gaggggaccg caggcggggg 420 cgcaggacct gaggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcta cacctccgtg tcccggcccg gccgcgggga 540 gccccgcttc atctcagtgg gctacgtgga cgacacgcag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggaata 660 ttgggaccgg aacacacaga tctgcaagac caacacacag acttaccgag agaacctgcg 720 gatcgcgctc cgctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg gggacggggc tgaccgcggg gccggggcca gggtctcaca ccctccagag 1020 gatgtacggc tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcata accagttcgc 1080 ctacgacggc aaggattaca tcgccctgaa cgaggacctg agctcctgga ccgcggcgga 1140 caccgcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcagctgag 1200 aacctacctg gagggcacgt gcgtggagtg gctccgcaga tacctggaga acgggaagga 1260 gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320 ccggggatgg cctccaacga gaagaagagg aaaatgggat cagcgctaga atgtcgccct 1380 cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440 ctaggacaat taagggatga cgtctctgag gaaatggagg ggaagacagt ccctagaata 1500 ctgatcaggg gtcccctttg acccctgcag cagccttggg aaccatgact tttcctctca 1560 ggccttgttc tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt 1620 cactttacct ccactcagat caggagcaga agtctctgtt ccccgctcag agactcgaac 1680 tttccaatga atagattatc ccaggtgcct gcgtccaggc tggtgtctgg gttctgtgcc 1740 ccttccccac cccaggtgtc ctgtccattc tcaggctggt cacatgggtg gtcctagggt 1800 gtcccatgag agatgcaaag cgcctgaatt ttctgactct tcccatcaga ccccccaaag 1860 acacatgtga cccaccaccc catctctgac catgaggcca ccctgaggtg ctgggccctg 1920 ggcttctacc ctgcggagat cacactgacc tggcagcggg atggcgagga ccaaactcag 1980 gacaccgagc ttgtggagac cagaccagca ggagacagaa ccttccagaa gtgggcagct 2040 gtggtggtgc cttctggaga agagcagaga tacacatgcc atgtacagca tgaggggctg 2100 ccgaagcccc tcaccctgag atggggtaag gagggggatg aggggtcata tctcttctca 2160 gggaaagcag gagcccttca gcagggtcag ggcccctcat cttcccctcc tttcccagag 2220 ccatcttccc agtccaccgt ccccatcgtg ggcattgttg ctggcctggc tgtcctagca 2280 gttgtggtca tcggagctgt ggtcgctgct gtgatgtgta ggaggaagag ttcaggtagg 2340 gaaggggtga ggggtggggt ctgggttttc ttgtcccact gggggtttca agccccaggt 2400 agaagtgttc cctgcatcat tactgggaag cagcatgcac acaggggcta acgcagcctg 2460 ggaccctgtg tgccagcact tactcttttg tgcagcacat gtgacaatga aggacggatg 2520 tatcaccttg atggttgtgg tgttggggtc ctgattccag cattcatgag tcaggggaag 2580 gtccctgcta aggacagacc ttaggagggc agttggtcca ggacccacac ttgctttcct 2640 cgtgtttcct gatcctgccc tgggtctgta gtcatacttc tggaaattcc ttttgggtcc 2700 aagactagga ggttcctcta agatctcatg gccctgcttc ctcccagtcc cctcacagga 2760 cattttcttc ccacaggtgg aaaaggaggg agctactctc aggctgcgtg taagtggtgg 2820 gggtgggagt gtggaggagc tcacccaccc cataattcct cctgtcccac gtctcctgtg 2880 ggctctgacc aggtcctgtt tttgttctac tccagccagc gacagtgccc agggctctga 2940 tgtgtctctc acagcttgaa aaggtgagat tcttggggtc tagagtgggc gggggggcgg 3000 ggagggggca gaggggaaag gcctgggtaa tggagattct ttgattggga tgtttcgcgt 3060 gtgtgatggg ctgttcagag tgtcatcact taccatgact aaccagaatt tgttcatgac 3120 tgttgttttc tgtagcctga gacagctgtc ttgtgaggga ctgagatgca ggatttcttc 3180 acgcctcccc tttgtgactt caagagcctc tggcatctct ttctgcaaag gcacctgaat 3240 gtgtctgcgt ccctgttagc ataatgtgag gaggtggaga gacagcccac ccttgtgtcc 3300 actgtgaccc ct 3312 // ID LN877359; SV 2; linear; genomic DNA; STD; HUM; 3323 BP. XX AC LN877359; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*44:03new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3323 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 1d8856635ca381acd3f69345a82e3656. DR Ensembl-Gn; ENSG00000224608; homo_sapiens. DR Ensembl-Tr; ENST00000435618; homo_sapiens. DR IMGT/HLA; HLA-B*44:03:01:02; HLA14090. XX FH Key Location/Qualifiers FH FT source 1..3323 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300130" FT /db_xref="taxon:9606" FT CDS join(285..357,487..756,1000..1275,1851..2126,2220..2336, FT 2778..2810,2917..2960) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*44:03new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q2L6G2" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q2L6G2" FT /protein_id="CUA55102.1" FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRT FT ALRYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQDAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGLCVESLRRYLENGKETLQRADPPKTHVTHHPISDHE FT VTLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*44:03new" FT /number=1 FT intron 358..486 FT /gene="HLA-B" FT /allele="HLA-B*44:03new" FT /number=1 FT exon 487..756 FT /gene="HLA-B" FT /allele="HLA-B*44:03new" FT /number=2 FT intron 757..999 FT /gene="HLA-B" FT /allele="HLA-B*44:03new" FT /number=2 FT exon 1000..1275 FT /gene="HLA-B" FT /allele="HLA-B*44:03new" FT /number=3 FT intron 1276..1850 FT /gene="HLA-B" FT /allele="HLA-B*44:03new" FT /number=3 FT exon 1851..2126 FT /gene="HLA-B" FT /allele="HLA-B*44:03new" FT /number=4 FT intron 2127..2219 FT /gene="HLA-B" FT /allele="HLA-B*44:03new" FT /number=4 FT exon 2220..2336 FT /gene="HLA-B" FT /allele="HLA-B*44:03new" FT /number=5 FT intron 2337..2777 FT /gene="HLA-B" FT /allele="HLA-B*44:03new" FT /number=5 FT exon 2778..2810 FT /gene="HLA-B" FT /allele="HLA-B*44:03new" FT /number=6 FT intron 2811..2916 FT /gene="HLA-B" FT /allele="HLA-B*44:03new" FT /number=6 FT exon 2917..>2960 FT /gene="HLA-B" FT /allele="HLA-B*44:03new" FT /number=7 XX SQ Sequence 3323 BP; 615 A; 966 C; 1051 G; 691 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccct cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggccggtg 360 agtgcggggt cgggagggaa atggcctctg tggggaggag agaggggacc gcaggcgggg 420 gcgcaggacc cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg 540 agccccgctt catcaccgtg ggctacgtgg acgacacgct gttcgtgagg ttcgacagcg 600 acgccacgag tccgaggaag gagccgcggg cgccatggat agagcaggag gggccggagt 660 attgggaccg ggagacacag atctccaaga ccaacacaca gacttaccga gagaacctgc 720 gcaccgcgct ccgctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgccccc gaggccgcgg gacccgccca gaccctcgac cggcgagagc cccaggcgcg 900 tttacccggt ttcattttca gttgaggcca aaatccccgc gggttggtcg gggcggggcg 960 gggctcgggg gacggggctg accgcggggc cggggccagg gtctcacatc atccagagga 1020 tgtacggctg cgacgtgggg ccggacgggc gcctcctccg cgggtatgac caggacgcct 1080 acgacggcaa ggattacatc gccctgaacg aggacctgag ctcctggacc gcggcggaca 1140 ccgcggctca gatcacccag cgcaagtggg aggcggcccg tgtggcggag cagctgagag 1200 cctacctgga gggcctgtgc gtggagtcgc tccgcagata cctggagaac gggaaggaga 1260 cgctgcagcg cgcgggtacc aggggcagtg gggagccttc cccatctcct ataggtcgcc 1320 ggggatggcc tcccacgaga agaggaggaa aatgggatca gcgctagaat gtcgccctcc 1380 cttgaatgga gaatggcatg agttttcctg agtttcctct gagggccccc tcttctctct 1440 aggacaatta agggatgacg tctctgagga aatggagggg aagacagtcc ctagaatact 1500 gatcaggggt cccctttgac ccctgcagca gccttgggaa ccgtgacttt tcctctcagg 1560 ccttgttctc tgcctcacac tcagtgtgtt tggggctctg attccagcac ttctgagtca 1620 ctttacctcc actcagatca ggaacagaag tccctgttcc ccgctcagag actcgaactt 1680 tccaatgaat aggagattat cccaggtgcc tgcgtccagg ctggtgtctg ggttctgtgc 1740 cccttcccca ccccaggtgt cctgtccatt ctcaggctgg tcacatgggt ggtcctaggg 1800 tgtcccatga gagatgcaaa gcgcctgaat tttctgactc ttcccatcag accccccaaa 1860 gacacatgtg acccaccacc ccatctctga ccatgaggtc accctgaggt gctgggccct 1920 gggcttctac cctgcggaga tcacactgac ctggcagcgg gatggcgagg accaaactca 1980 ggacaccgag cttgtggaga ccagaccagc aggagataga accttccaga agtgggcagc 2040 tgtggtggtg ccttctggag aagagcagag atacacatgc catgtacagc atgaggggct 2100 gccgaagccc ctcaccctga gatggggtaa ggagggggat gaggggtcat atctcttctc 2160 agggaaagca ggagcccttc agcagggtca gggcccctca tcttcccttc ctttcccaga 2220 gccgtcttcc cagtccaccg tccccatcgt gggcattgtt gctggcctgg ctgtcctagc 2280 agttgtggtc atcggagctg tggtcgctgc tgtgatgtgt aggaggaaga gctcaggtag 2340 ggaaggggtg aggggtgggg tctgggtttt cttgtcccac tgggggtttc aagccccagg 2400 tagaagtgtt ccctgcctca ttactgggaa gcagcatcca cacaggggct aacgcagcct 2460 gggaccctgt gtgccagcac ttactctttt gtgcagcaca tgtgacaatg aaggacggat 2520 gtatcacctt ggtggttgtg gtgttggggt cctgattcca gcattcatga gtcaggggaa 2580 ggtccctgct aaggacagac cttaggaggg cagttggtcc aggacccaca cttgctttcc 2640 tcgtgtttcc tgatcctgcc ttgggtctgt agtcatactt ctggaaattc cttttgggtc 2700 caagacgagg aggttcctct aagatctcat ggccctgctt cctcccagtc ccctcacagg 2760 gcattttctt cccacaggtg gaaaaggagg gagctactct caggctgcgt gtaagtgatg 2820 ggggcgggag tgtggaggag ctcacccacc ccataattcc tcctgtccca cgtctcctgc 2880 gggctctgac caggtcctgt ttttgttcta ctccaggcag cgacagtgcc cagggctctg 2940 atgtgtctct cacagcttga aaaggtgaga ttcttggggt ctagagtggg tggggtggca 3000 ggtctggggg tgggtggggc agtggggaaa ggcctgggta atggagattc tttgattggg 3060 atgtttcgcg tgtgtggtgg gctgtttaga gtgtcatcac ttaccatgac taaccagaat 3120 ttgttcatga ctgttgtttt ctgtagcctg agacagctgt cttgtgaggg actgagatgc 3180 aggatttctt cacgcctccc ctttgtgact tcaagagcct ctggcatctc tttctgcaaa 3240 ggcacctgaa tgtgtctgcg tccctgttag cataatgtga ggaggtggag agacagccca 3300 cccccgtgtc caccgtgacc cct 3323 // ID LN877360; SV 2; linear; genomic DNA; STD; HUM; 3302 BP. XX AC LN877360; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-A gene for MHC class I antigen, allele HLA-B*80:01:01:02 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3302 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 9daa9466e6f43d7680023b5c5c69fb4b. DR IMGT/HLA; HLA-A*80:01:01:02; HLA08791. XX FH Key Location/Qualifiers FH FT source 1..3302 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300131" FT /db_xref="taxon:9606" FT CDS join(301..373,504..773,1015..1290,1873..2148,2251..2367, FT 2810..2842,2985..3032,3201..3205) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-A" FT /allele="HLA-A*80:01:01:02" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:K7WT83" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:K7WT83" FT /protein_id="CUA55103.1" FT /translation="MAVMPPRTLLLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPR FT FIAVGYVDDSQFVQFDSDAASQRMEPRAPWIEQEEPEYWDEETRNVKAHSQTNRANLGT FT LRGYYNQSEDGSHTIQIMYGCDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMA FT AQITKRKWEAARRAEQLRAYLEGECVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGKEKRY FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIIAGLVLLGAVIAGAVVAAVMWRKKSSVRK FT GGSYSQAASSDSAQGSDVSLTACKV" FT exon <301..373 FT /gene="HLA-A" FT /allele="HLA-A*80:01:01:02" FT /number=1 FT intron 374..503 FT /gene="HLA-A" FT /allele="HLA-A*80:01:01:02" FT /number=1 FT exon 504..773 FT /gene="HLA-A" FT /allele="HLA-A*80:01:01:02" FT /number=2 FT intron 774..1014 FT /gene="HLA-A" FT /allele="HLA-A*80:01:01:02" FT /number=2 FT exon 1015..1290 FT /gene="HLA-A" FT /allele="HLA-A*80:01:01:02" FT /number=3 FT intron 1291..1872 FT /gene="HLA-A" FT /allele="HLA-A*80:01:01:02" FT /number=3 FT exon 1873..2148 FT /gene="HLA-A" FT /allele="HLA-A*80:01:01:02" FT /number=4 FT intron 2149..2250 FT /gene="HLA-A" FT /allele="HLA-A*80:01:01:02" FT /number=4 FT exon 2251..2367 FT /gene="HLA-A" FT /allele="HLA-A*80:01:01:02" FT /number=5 FT intron 2368..2809 FT /gene="HLA-A" FT /allele="HLA-A*80:01:01:02" FT /number=5 FT exon 2810..2842 FT /gene="HLA-A" FT /allele="HLA-A*80:01:01:02" FT /number=6 FT intron 2843..2984 FT /gene="HLA-A" FT /allele="HLA-A*80:01:01:02" FT /number=6 FT exon 2985..3032 FT /gene="HLA-A" FT /allele="HLA-A*80:01:01:02" FT /number=7 FT intron 3033..3200 FT /gene="HLA-A" FT /allele="HLA-A*80:01:01:02" FT /number=7 FT exon 3201..>3205 FT /gene="HLA-A" FT /allele="HLA-A*80:01:01:02" FT /number=8 XX SQ Sequence 3302 BP; 637 A; 956 C; 1021 G; 688 T; 0 other; caggagcaga ggggtcaggg cgaagtccca gggccccagg cgtggctctc agggtctcag 60 gccccgaagg cggtgtatgg attggggagt cccagccttg gagattcccc aactccgcag 120 tttcttttct ccctctccca acctatgtag ggtccttctt cctggatact cacgacgcgg 180 acccagttct cactcctatt gggtgtcggg tttccagaga agccaatcag tgtcgtcgcg 240 gtcgcggttc taaagtccgc acgcacccac cgggactcag attctcccca gacgccgagg 300 atggccgtca tgccgccccg aaccctcctc ctgctactct cgggggccct ggccctgacc 360 cagacctggg caggtgagtg cggggtcggg agggaaacgg cctctgcggg gagaagcaag 420 gggcccgccc ggcgggggcg caggacccgg gaagccgcgc cgggaggagg gtcgggcggg 480 tctcagccac tcctcgcccc caggctccca ctccatgagg tatttcttca catccgtgtc 540 ccggcccggc cgcggggagc cccgcttcat cgcagtgggc tacgtggacg actcgcagtt 600 cgtgcagttc gacagcgacg ccgcgagcca gaggatggag ccgcgggcgc cgtggataga 660 gcaggaggag ccggagtatt gggacgagga gacacggaat gtgaaggccc actcacagac 720 taaccgagcg aacctgggga ccctgcgcgg ctactacaac cagagcgagg acggtgagtg 780 accccggccc ggggcgcagg tcacgacccc tcatccccta cggacgggcc aggtcgccca 840 cagtctccgg gtccgagatc caccccgaag ccgcgggacc ccgagaccct tgccccggga 900 gaggcccagg cgcctttagc cggtttcatt ttcagtttag gccaaaaatc cccccgggtg 960 ggtcggggcg gggcggggct cgggggaccg ggctgaccgc ggggtcgggg ccaggttctc 1020 acaccatcca gataatgtat ggctgcgacg tggggtcgga cgggcgcttc ctccgcgggt 1080 accggcagga cgcctacgac ggcaaggatt acatcgccct gaacgaggac ctgcgctctt 1140 ggaccgcggc ggacatggcg gctcagatca ccaagcgcaa gtgggaggcg gcccgtcggg 1200 cggagcagct gagagcctac ctggagggcg agtgcgtgga cgggctccgc agatacctgg 1260 agaacgggaa ggagacgctg cagcgcacgg gtaccagggg ccacggggcg ccttcctgat 1320 cgcctgtaga tctcccgggc tggcctccca caaggagggg agacaattgg gaccaacact 1380 agaatatcac cctccctctg ctcctgaggg agaggaatcc tcctgggttt ccagattctg 1440 taccagagag tgactctgag gttccgccct gctctctgac acaattaagg gataaaaatc 1500 tctgaaggaa tgacgggaag acgatccctc gaatactgat gagtggttcc ctttgacaca 1560 caccggcggc agccttgggc ccgtgacttt tcctctcagg ccctgttctc tgcttcacac 1620 tcaatatgtg tgggggtctg agtccagcac ttctgagtct ctcagcctcc actcaggtca 1680 ggaccagaag tcgctgttcc ctcgtcaggg aatagaagat tatcccaggt gcctgtgtcc 1740 aggctggtct gggttctgtg ctctcttccc catcccaggt gtcctgtcca tcctcaaaat 1800 ggccacatgc gtgctggtgg agtgtcccat gacagatgca aaatggctga attttctgac 1860 tcttcccgtc agaccccccc aagacacata tgacccacca ccccatctct gaccatgagg 1920 ccactctgag gtgctgggcc ctgagcttct accctgcgga gatcacactg acctggcagc 1980 gggatgggga ggaccagacc caggacacgg agctcgtgga gaccaggcct gcaggggatg 2040 gaaccttcca gaagtgggcg gctgtggtgg taccttctgg aaaggagaag agatacacct 2100 gccatgtgca gcatgagggt ctgcccgagc ccctcaccct gagatggggt aaggagggag 2160 atgggggtgt catgtctctt agggaaagca ggagcctctc tggagacctt tagcagggtc 2220 agagcccctc accttcccct cttttcccag agccatcttc ccagcccacc atccccattg 2280 tgggcatcat tgctggcctg gttctccttg gagctgtgat cgctggagct gtggtcgctg 2340 ccgtgatgtg gaggaagaag agctcaggtg gagaaggggt gaagggtggg gtctgagatt 2400 tcttgtctca ctgagggttc caagccccag ctagaaatgt gccctgtctc attcctggga 2460 agcaccaccc acaatcatgg gcccacccag cctgggccct gtgtgccagc acttactctt 2520 ttgtaaagca cctgtgacaa tgaaggacag atttatcacc ttgattatgg cggtgatggg 2580 acctgatccc agcagtcaca agtcacaggg gaaggtccct gaggacagac ctcaggaggg 2640 cggttggtcc aggacccaca cctgctttct tcatgtttcc tgatcctgcc ctgggtctgc 2700 attcacacat ttctggaaac ttctctgggg tccaaggcta cgaggttcct ctaggacctt 2760 aaggccctgg ctcctttctg gtagctcaca ggacattttc ttcccacagt tagaaaagga 2820 gggagctact ctcaggctgc aagtaagtat gaaggaggct gatgcctgag gtccttggga 2880 tattgtggtt gggagcccat gggggagctc acccacccca caattcctcc tctagccaca 2940 tcttctgtgg gatctgacca ggttctgttt ttgttctacc ccaggcagtg acagtgccca 3000 gggctctgat gtgtctctca cagcttgtaa aggtgagagc ctggagggcc tgatgtgtgt 3060 tgggtgttgg ggggaacagt ggacacagct gtgctatggg gtttctttgc attggatgta 3120 ttgagcatgc gatgggctgt ttaaagtgtg acccctcact gtgagtgata tgaatttgtt 3180 catgaatatt ttttctatag tgtgagacag ctgccttgtg tgggactgag aggcaagagt 3240 tgttcctgcc cttccctttg tgacttgaag aaccctgact ttgtttctgc aaaggcacct 3300 gc 3302 // ID LN877361; SV 2; linear; genomic DNA; STD; HUM; 3327 BP. XX AC LN877361; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*52:01:01:02 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3327 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; ff0ebc333c63692ac07e7b95c6febbd0. DR IMGT/HLA; HLA-B*52:01:01:02; HLA05917. XX FH Key Location/Qualifiers FH FT source 1..3327 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300131" FT /db_xref="taxon:9606" FT CDS join(285..357,487..756,1002..1277,1853..2128,2233..2349, FT 2791..2823,2930..2973) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q0EFB2" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q0EFB2" FT /protein_id="CUA55104.1" FT /translation="MRVTAPRTVLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRI FT ALRYYNQSEAGSHTWQTMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAAREAEQLRAYLEGLCVEWLRRHLENGKETLQRADPPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=1 FT intron 358..486 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=1 FT exon 487..756 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=2 FT intron 757..1001 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=2 FT exon 1002..1277 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=3 FT intron 1278..1852 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=3 FT exon 1853..2128 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=4 FT intron 2129..2232 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=4 FT exon 2233..2349 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=5 FT intron 2350..2790 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=5 FT exon 2791..2823 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=6 FT intron 2824..2929 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=6 FT exon 2930..>2973 FT /gene="HLA-B" FT /allele="HLA-B*52:01:01:02" FT /number=7 XX SQ Sequence 3327 BP; 621 A; 968 C; 1043 G; 695 T; 0 other; gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagagcct 60 tgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcggatatct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccgt cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggccggtg 360 agtgcggggt cgggagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg 420 gcgcaggacc tgaggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg 540 agccccgctt catcgcagtg ggctacgtgg acgacaccca gttcgtgagg ttcgacagcg 600 acgccgcgag tccgaggacg gagccccggg cgccatggat agagcaggag gggccggagt 660 attgggaccg ggagacacag atctccaaga ccaacacaca gacttaccga gagaacctgc 720 ggatcgcgct ccgctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgcctcc ctgaggccgc gggacccgcc cagaccctcg accggcgaga gccccaggcg 900 cgtttacccg gtttcatttt cagttgaggc caaaatcccc gcgggttggt cggggcgggg 960 cggggctcgg gggacggtgc tgaccgcggg gccggggcca gggtctcaca cttggcagac 1020 gatgtatggc tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcata accagtacgc 1080 ctacgacggc aaagattaca tcgccctgaa cgaggacctg agctcctgga ccgcggcgga 1140 caccgcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgaggcgg agcagctgag 1200 agcctacctg gagggcctgt gcgtggagtg gctccgcaga cacctggaga acgggaagga 1260 gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320 ccggggatgg cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct 1380 cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440 ctaggacaat taagggatga cgtctctgag gaaatggagg ggaagacagt ccctagaata 1500 ctgatcaggg gtcccctttg acccctgcag cagccttggg aaccgtgact tttcctctca 1560 ggccttgttc tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt 1620 cactttacct ccactcagat caggagcaga agtccctgtt ccccgctcag agactcgaac 1680 tttccaatga ataggagatt atcccaggtg cctgcgtcca ggctggtgtc tgggttctgt 1740 gccccttccc cacaccaggt gtcctgtcca ttctcaggct ggtcacatgg gtggtcctag 1800 ggtgtcccat gagagatgca aagcgcctga attttctgac tcttcccatc agacccccca 1860 aagacacacg tgacccacca ccccgtctct gaccatgagg ccaccctgag gtgctgggcc 1920 ctgggcttct accctgcgga gatcacactg acctggcagc gggatggcga ggaccaaact 1980 caggacactg agcttgtgga gaccagacca gcaggagata gaaccttcca gaagtgggca 2040 gctgtggtgg tgccttctgg agaagagcag agatacacat gccatgtaca gcatgagggg 2100 ctgccgaagc ccctcaccct gagatggggt aaggaggggg atgaggggtc atatctcttc 2160 tcagggaaag caggagccct tctggagccc ttcagcaggg tcagggcccc tcgtcttccc 2220 ctcctttccc agagccatct tcccagtcca ccatccccat cgtgggcatt gttgctggcc 2280 tggctgtcct agcagttgtg gtcatcggag ctgtggtcgc tactgtgatg tgtaggagga 2340 agagctcagg tagggaaggg gtgaggggtg gggtctgggt tttcttgtcc cactgggggt 2400 ttcaagcccc aggtagaagt gttccctgcc tcattactgg gaagcagcat ccacacaggg 2460 gctaacgcag cctgggaccc tgtgtgccag cacttactct tttgtgcagc acatgtgaca 2520 atgaaggacg gatgtatcac cttgatggtt gtggtgttgg ggtcctgatt tcagcattca 2580 tgagtcaggg gaaggtccct gctaaggaca gaccttagga gggcagttgg tccaggaccc 2640 acacttgctt tcctcgtgtt tcctgatcct gccttgggtc tgtagtcata cttctggaaa 2700 ttccttttgg gtccaagacg aggaggttcc tctaagatct catggccctg cttcctccca 2760 gtcccctcac aggacatttt cttcccacag gtggaaaagg agggagctac tctcaggctg 2820 cgtgtaagtg gtgggggtgg gagtgtggag gagctcaccc accccataat tcctcctgtc 2880 ccacgtctcc tgcgggctct gaccaggtcc tgtttttgtt ctactccagc cagcgacagt 2940 gcccagggct ctgatgtgtc tctcacagct tgaaaaggtg agattcttgg ggtctagagt 3000 gggcgggggg ggcggggagg gggcagaggg gaaaggcctg ggtaatggag attctttgat 3060 tgggatgttt cgcgtgtgtc gtgggctgtt cagagtgtca tcacttacca tgactaacca 3120 gaatttgttc atgactgttg ttttctgtag cctgagacag ctgtcttgtg agggactgag 3180 atgcaggatt tcttcactcc tcccctttgt gacttcaaga gcctctggca tctctttctg 3240 caaaggcacc tgaatgtgtc tgcgtccctg ttagcataat gtgaggaggt ggagagacag 3300 cccacccttg tgtccactgt gacccct 3327 // ID LN877362; SV 2; linear; genomic DNA; STD; HUM; 3323 BP. XX AC LN877362; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*44:03:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3323 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 83f22de8d085ea321aad42dbf25a571a. DR Ensembl-Gn; ENSG00000224608; homo_sapiens. DR Ensembl-Tr; ENST00000435618; homo_sapiens. DR IMGT/HLA; HLA-B*44:03:01:01; HLA00319. XX FH Key Location/Qualifiers FH FT source 1..3323 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300132" FT /db_xref="taxon:9606" FT CDS join(285..357,487..756,1000..1275,1851..2126,2220..2336, FT 2778..2810,2917..2960) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q2L6G2" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q2L6G2" FT /protein_id="CUA55105.1" FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRT FT ALRYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQDAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGLCVESLRRYLENGKETLQRADPPKTHVTHHPISDHE FT VTLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=1 FT intron 358..486 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=1 FT exon 487..756 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=2 FT intron 757..999 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=2 FT exon 1000..1275 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=3 FT intron 1276..1850 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=3 FT exon 1851..2126 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=4 FT intron 2127..2219 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=4 FT exon 2220..2336 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=5 FT intron 2337..2777 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=5 FT exon 2778..2810 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=6 FT intron 2811..2916 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=6 FT exon 2917..>2960 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01" FT /number=7 XX SQ Sequence 3323 BP; 614 A; 966 C; 1052 G; 691 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccct cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggccggtg 360 agtgcggggt cgggagggaa atggcctctg tggggaggag agaggggacc gcaggcgggg 420 gcgcaggacc cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg 540 agccccgctt catcaccgtg ggctacgtgg acgacacgct gttcgtgagg ttcgacagcg 600 acgccacgag tccgaggaag gagccgcggg cgccatggat agagcaggag gggccggagt 660 attgggaccg ggagacacag atctccaaga ccaacacaca gacttaccga gagaacctgc 720 gcaccgcgct ccgctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgccccc gaggccgcgg gacccgccca gaccctcgac cggcgagagc cccaggcgcg 900 tttacccggt ttcattttca gttgaggcca aaatccccgc gggttggtcg gggcggggcg 960 gggctcgggg gacggggctg accgcggggc cggggccagg gtctcacatc atccagagga 1020 tgtacggctg cgacgtgggg ccggacgggc gcctcctccg cgggtatgac caggacgcct 1080 acgacggcaa ggattacatc gccctgaacg aggacctgag ctcctggacc gcggcggaca 1140 ccgcggctca gatcacccag cgcaagtggg aggcggcccg tgtggcggag cagctgagag 1200 cctacctgga gggcctgtgc gtggagtcgc tccgcagata cctggagaac gggaaggaga 1260 cgctgcagcg cgcgggtacc aggggcagtg gggagccttc cccatctcct ataggtcgcc 1320 ggggatggcc tcccacgaga agaggaggaa aatgggatca gcgctagaat gtcgccctcc 1380 cttgaatgga gaatggcatg agttttcctg agtttcctct gagggccccc tcttctctct 1440 aggacaatta agggatgacg tctctgagga aatggagggg aagacagtcc ctagaatact 1500 gatcaggggt cccctttgac ccctgcagca gccttgggaa ccgtgacttt tcctctcagg 1560 ccttgttctc tgcctcacac tcagtgtgtt tggggctctg attccagcac ttctgagtca 1620 ctttacctcc actcagatca ggagcagaag tccctgttcc ccgctcagag actcgaactt 1680 tccaatgaat aggagattat cccaggtgcc tgcgtccagg ctggtgtctg ggttctgtgc 1740 cccttcccca ccccaggtgt cctgtccatt ctcaggctgg tcacatgggt ggtcctaggg 1800 tgtcccatga gagatgcaaa gcgcctgaat tttctgactc ttcccatcag accccccaaa 1860 gacacatgtg acccaccacc ccatctctga ccatgaggtc accctgaggt gctgggccct 1920 gggcttctac cctgcggaga tcacactgac ctggcagcgg gatggcgagg accaaactca 1980 ggacaccgag cttgtggaga ccagaccagc aggagataga accttccaga agtgggcagc 2040 tgtggtggtg ccttctggag aagagcagag atacacatgc catgtacagc atgaggggct 2100 gccgaagccc ctcaccctga gatggggtaa ggagggggat gaggggtcat atctcttctc 2160 agggaaagca ggagcccttc agcagggtca gggcccctca tcttcccttc ctttcccaga 2220 gccgtcttcc cagtccaccg tccccatcgt gggcattgtt gctggcctgg ctgtcctagc 2280 agttgtggtc atcggagctg tggtcgctgc tgtgatgtgt aggaggaaga gctcaggtag 2340 ggaaggggtg aggggtgggg tctgggtttt cttgtcccac tgggggtttc aagccccagg 2400 tagaagtgtt ccctgcctca ttactgggaa gcagcatcca cacaggggct aacgcagcct 2460 gggaccctgt gtgccagcac ttactctttt gtgcagcaca tgtgacaatg aaggacggat 2520 gtatcacctt ggtggttgtg gtgttggggt cctgattcca gcattcatga gtcaggggaa 2580 ggtccctgct aaggacagac cttaggaggg cagttggtcc aggacccaca cttgctttcc 2640 tcgtgtttcc tgatcctgcc ttgggtctgt agtcatactt ctggaaattc cttttgggtc 2700 caagacgagg aggttcctct aagatctcat ggccctgctt cctcccagtc ccctcacagg 2760 gcattttctt cccacaggtg gaaaaggagg gagctactct caggctgcgt gtaagtgatg 2820 ggggcgggag tgtggaggag ctcacccacc ccataattcc tcctgtccca cgtctcctgc 2880 gggctctgac caggtcctgt ttttgttcta ctccaggcag cgacagtgcc cagggctctg 2940 atgtgtctct cacagcttga aaaggtgaga ttcttggggt ctagagtggg tggggtggca 3000 ggtctggggg tgggtggggc agtggggaaa ggcctgggta atggagattc tttgattggg 3060 atgtttcgcg tgtgtggtgg gctgtttaga gtgtcatcac ttaccatgac taaccagaat 3120 ttgttcatga ctgttgtttt ctgtagcctg agacagctgt cttgtgaggg actgagatgc 3180 aggatttctt cacgcctccc ctttgtgact tcaagagcct ctggcatctc tttctgcaaa 3240 ggcacctgaa tgtgtctgcg tccctgttag cataatgtga ggaggtggag agacagccca 3300 cccccgtgtc caccgtgacc cct 3323 // ID LN877365; SV 2; linear; genomic DNA; STD; HUM; 3314 BP. XX AC LN877365; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-A gene for MHC class I antigen, allele HLA-A*02:05:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3314 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 0354b6701fdd71e7d22f68d7d2ca0bf7. DR IMGT/HLA; HLA-A*02:05:01:01; HLA00010. XX FH Key Location/Qualifiers FH FT source 1..3314 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300133" FT /db_xref="taxon:9606" FT CDS join(301..373,504..773,1015..1290,1891..2166,2266..2382, FT 2821..2853,2996..3043,3213..3217) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-A" FT /allele="HLA-A*02:05:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:E5FQ45" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:E5FQ45" FT /protein_id="CUA55108.1" FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASRRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGT FT LRGYYNQSEAGSHTLQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMA FT AQTTKHKWEAAHVAEQWRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRK FT GGSYSQAASSDSAQGSDVSLTACKV" FT exon <301..373 FT /gene="HLA-A" FT /allele="HLA-A*02:05:01" FT /number=1 FT intron 374..503 FT /gene="HLA-A" FT /allele="HLA-A*02:05:01" FT /number=1 FT exon 504..773 FT /gene="HLA-A" FT /allele="HLA-A*02:05:01" FT /number=2 FT intron 774..1014 FT /gene="HLA-A" FT /allele="HLA-A*02:05:01" FT /number=2 FT exon 1015..1290 FT /gene="HLA-A" FT /allele="HLA-A*02:05:01" FT /number=3 FT intron 1291..1890 FT /gene="HLA-A" FT /allele="HLA-A*02:05:01" FT /number=3 FT exon 1891..2166 FT /gene="HLA-A" FT /allele="HLA-A*02:05:01" FT /number=4 FT intron 2167..2265 FT /gene="HLA-A" FT /allele="HLA-A*02:05:01" FT /number=4 FT exon 2266..2382 FT /gene="HLA-A" FT /allele="HLA-A*02:05:01" FT /number=5 FT intron 2383..2820 FT /gene="HLA-A" FT /allele="HLA-A*02:05:01" FT /number=5 FT exon 2821..2853 FT /gene="HLA-A" FT /allele="HLA-A*02:05:01" FT /number=6 FT intron 2854..2995 FT /gene="HLA-A" FT /allele="HLA-A*02:05:01" FT /number=6 FT exon 2996..3043 FT /gene="HLA-A" FT /allele="HLA-A*02:05:01" FT /number=7 FT intron 3044..3212 FT /gene="HLA-A" FT /allele="HLA-A*02:05:01" FT /number=7 FT exon 3213..>3217 FT /gene="HLA-A" FT /allele="HLA-A*02:05:01" FT /number=8 XX SQ Sequence 3314 BP; 638 A; 953 C; 1022 G; 701 T; 0 other; cagaagcaga ggggtcaggg cgaagtccca gggccccagg cgtggctctc agggtctcag 60 gccccgaagg cggtgtatgg attggggagt cccagccttg gggattcccc aactccgcag 120 tttcttttct ccctctccca acctatgtag ggtccttctt cctggatact cacgacgcgg 180 acccagttct cactcccatt gggtgtcggg tttccagaga agccaatcag tgtcgtcgcg 240 gtcgcggttc taaagtccgc acgcacccac cgggactcag attctcccca gacgccgagg 300 atggccgtca tggcgccccg aaccctcgtc ctgctactct cgggggctct ggccctgacc 360 cagacctggg cgggtgagtg cggggtcggg agggaaacgg cctctgtggg gagaagcaac 420 gggcccgcct ggcgggggcg caggacccgg gaagccgcgc cgggaggagg gtcgggcggg 480 tctcagccac tcctcgtccc caggctctca ctccatgagg tatttctaca cctccgtgtc 540 ccggcccggc cgcggggagc cccgcttcat cgcagtgggc tacgtggacg acacgcagtt 600 cgtgcggttc gacagcgacg ccgcgagccg gaggatggag ccgcgggcgc cgtggataga 660 gcaggagggt ccggagtatt gggacgggga gacacggaaa gtgaaggccc actcacagac 720 tcaccgagtg gacctgggga ccctgcgcgg ctactacaac cagagcgagg ccggtgagtg 780 accccggccc ggggcgcagg tcacgacctc tcatccccca cggacgggcc aggtcgccca 840 cagtctccgg gtccgagatc cgccccgaag ccgcgggacc ccgagaccct tgccccggga 900 gaggcccagg cgcctttacc cggtttcatt ttcagtttag gccaaaaatc cccccaggtt 960 ggtcggggcg gggcggggct cgggggaccg ggctgaccgc ggggtccggg ccaggttctc 1020 acaccctcca gaggatgtat ggctgcgacg tggggtcgga ctggcgcttc ctgcgcgggt 1080 accaccagta cgcctacgac ggcaaggatt acatcgccct gaaagaggac ctgcgctctt 1140 ggaccgcggc ggacatggca gctcagacca ccaagcacaa gtgggaggcg gcccatgtgg 1200 cggagcagtg gagagcctac ctggagggca cgtgcgtgga gtggctccgc agatacctgg 1260 agaacgggaa ggagacgctg cagcgcacgg gtaccagggg ccacggggcg cctccctgat 1320 cgcctgtaga tctcccgggc tggcctccca caaggagggg agacaattgg gaccaacact 1380 agaatatcgc cctccctctg gtcctgaggg agaggaatcc tcctgggttt ccagatcctg 1440 taccagagag tgactctgag gttccgccct gctctctgac acaattaagg gataaaatct 1500 ctgaaggaat gacgggaaga cgatccctcg aatactgatg agtggttccc tttgacacac 1560 acaggcagca gccttgggcc cgtgactttt cctctcaggc cttgttctct gcttcacact 1620 caatgtgtgt gggggtctga gtccagcact tctgagtccc tcagcctcca ctcaggtcag 1680 gaccagaagt cgctgttccc tcttcaggga ctagaatttt ccacggaata ggagattatc 1740 ccaggtgcct gtgtccaggc tggtgtctgg gttctgtgct cccttcccca tcccaggtgt 1800 cctgtccatt ctcaagatag ccacatgtgt gctggaggag tgtcccatga cagatgcaaa 1860 atgcctgaat gatctgactc ttcctgacag acgcccccaa aacgcatatg actcaccacg 1920 ctgtctctga ccatgaagcc accctgaggt gctgggccct gagcttctac cctgcggaga 1980 tcacactgac ctggcagcgg gatggggagg accagaccca ggacacggag ctcgtggaga 2040 ccaggcctgc aggggatgga accttccaga agtgggcggc tgtggtggtg ccttctggac 2100 aggagcagag atacacctgc catgtgcagc atgagggttt gcccaagccc ctcaccctga 2160 gatggggtaa ggagggagac gggggtgtca tgtcttttag ggaaagcagg agcctctctg 2220 acctttagca gggtcagggc ccctcacctt cccctctttt cccagagccg tcttcccagc 2280 ccaccatccc catcgtgggc atcattgctg gcctggttct ctttggagct gtgatcactg 2340 gagctgtggt cgctgctgtg atgtggagga ggaagagctc aggtggggaa ggggtgaagg 2400 gtgggtctga gatttcttgt ctcactgagg gttccaagac ccaggtagaa gtgtgccctg 2460 cctcgttact gggaagcacc acccacaatt atgggcctac ccagcctggg ccctgtgtgc 2520 cagcacttac tcttttgtaa agcacctgtt aaaatgaagg acagatttat caccttgatt 2580 acagcggtga tgggacctga tcccagcagt cacaagtcac aggggaaggt ccctgaggac 2640 cttcaggagg gcggttggtc caggacccac acctgctttc ttcatgtttc ctgatcccgc 2700 cctgggtctg cagtcacaca tttctggaaa cttctctgag gtccaagact tggaggttcc 2760 tctaggacct taaggccctg actcctttct ggtatctcac aggacatttt cttcccacag 2820 atagaaaagg agggagctac tctcaggctg caagtaagta tgaaggaggc tgatgcctga 2880 ggtccttggg atattgtgtt tgggagccca tgggggagct cacccacccc acaattcctc 2940 ctctagccac atcttctgtg ggatctgacc aggttctgtt tttgttctac cccaggcagt 3000 gacagtgccc agggctctga tgtgtctctc acagcttgta aaggtgagag cctggagggc 3060 ctgatgtgtg ttgggtgttg ggcggaacag tggacacagc tgtgctatgg ggtttctttc 3120 cattggatgt attgagcatg cgatgggctg tttaaagtgt gacccctcac tgtgacagat 3180 acgaatttgt tcatgaatat ttttttctat agtgtgagac agctgccttg tgtgggactg 3240 agaggcaaga gttgttcctg cccttccctt tgtgacttga agaaccctga ctttgtttct 3300 gcaaaggcac ctgc 3314 // ID LN877366; SV 2; linear; genomic DNA; STD; HUM; 3340 BP. XX AC LN877366; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*50:01:01ext XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3340 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 9d8a8957807527e6413e745a8fd4e068. DR IMGT/HLA; HLA-B*50:01:01:01; HLA00341. XX FH Key Location/Qualifiers FH FT source 1..3340 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300133" FT /db_xref="taxon:9606" FT CDS join(285..357,486..755,1006..1281,1857..2132,2237..2353, FT 2795..2827,2934..2977) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*50:01:01ext" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:V6DZ79" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:V6DZ79" FT /protein_id="CUA55109.1" FT /translation="MRVTAPRTVLLLLSAALALTETWAGSHSMRYFHTAMSRPGRGEPR FT FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRESLRN FT LRGYYNQSEAGSHTWQRMYGCDLGPDGRLLRGYNQLAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAAREAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*50:01:01ext" FT /number=1 FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*50:01:01ext" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*50:01:01ext" FT /number=2 FT intron 756..1005 FT /gene="HLA-B" FT /allele="HLA-B*50:01:01ext" FT /number=2 FT exon 1006..1281 FT /gene="HLA-B" FT /allele="HLA-B*50:01:01ext" FT /number=3 FT intron 1282..1856 FT /gene="HLA-B" FT /allele="HLA-B*50:01:01ext" FT /number=3 FT exon 1857..2132 FT /gene="HLA-B" FT /allele="HLA-B*50:01:01ext" FT /number=4 FT intron 2133..2236 FT /gene="HLA-B" FT /allele="HLA-B*50:01:01ext" FT /number=4 FT exon 2237..2353 FT /gene="HLA-B" FT /allele="HLA-B*50:01:01ext" FT /number=5 FT intron 2354..2794 FT /gene="HLA-B" FT /allele="HLA-B*50:01:01ext" FT /number=5 FT exon 2795..2827 FT /gene="HLA-B" FT /allele="HLA-B*50:01:01ext" FT /number=6 FT intron 2828..2933 FT /gene="HLA-B" FT /allele="HLA-B*50:01:01ext" FT /number=6 FT exon 2934..>2977 FT /gene="HLA-B" FT /allele="HLA-B*50:01:01ext" FT /number=7 XX SQ Sequence 3340 BP; 616 A; 973 C; 1052 G; 699 T; 0 other; gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagcgtcg ccgtggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcac 300 cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc ggcagggaaa tggcctctgt ggggaggagc gaggggaccg caggcggggg 420 cgcaggaccc ggggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcca caccgccatg tcccggcccg gccgcgggga 540 gccccgcttc atcaccgtgg gctacgtgga cgacacgctg ttcgtgaggt tcgacagcga 600 cgccacgagt ccgaggaagg agccgcgggc gccatggata gagcaggagg ggccggagta 660 ttgggaccgg gagacacaga tctccaagac caacacacag acttaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcccccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggcggggc tcgggggacg gggctgaccg cggggcctgg gccagggtct cacacttggc 1020 agaggatgta tggctgcgac ctggggcccg acgggcgcct cctccgcggg tataaccagt 1080 tagcctacga cggcaaggat tacatcgccc tgaacgagga cctgagctcc tggaccgcgg 1140 cggacaccgc ggctcagatc acccagcgca agtgggaggc ggcccgtgag gcggagcagc 1200 tgagagccta cctggagggc ctgtgcgtgg agtggctccg cagatacctg gagaacggga 1260 aggagacgct gcagcgcgcg ggtaccaggg gcagtgggga gccttcccca tctcctatag 1320 gtcgccgggg atggcctccc acgagaagag gaggaaaatg ggatcagcgc tagaatgtcg 1380 ccctcccttg aatggagaat ggcatgagtt ttcctgagtt tcctctgagg gccccctctt 1440 ctctctagga caattaaggg atgacgtctc tgaggaaatg gaggggaagt cagtccctag 1500 aatactgatc aggggtcccc tttgacccct gcagcagcct tgggaaccgt gacttttcct 1560 ctcaggcctt gttctctgcc tcacactcag tgtgtttggg gctctgattc cagcacttct 1620 gagtcacttt acctccactc agatcaggag cagaagtccc tgttccccgc tcagagactc 1680 gaactttcca atgaatagga gattatccca ggtgcctgcg tccaggctgg tgtctgggtt 1740 ctgtgcccct tccccacccc aggtgtcctg tccattctca ggctggtcac atgggtggtc 1800 ctagggtgtc ccatgagaga tgcaaagcgc ctgaattttc tgactcttcc catcagaccc 1860 cccaaagaca catgtgaccc accaccccat ctctgaccat gaggccaccc tgaggtgctg 1920 ggccctgggc ttctaccctg cggagatcac actgacctgg cagcgggatg gcgaggacca 1980 aactcaggac accgagcttg tggagaccag accagcagga gatagaacct tccagaagtg 2040 ggcagctgtg gtggtgcctt ctggagaaga gcagagatac acatgccatg tacagcatga 2100 ggggctgccg aagcccctca ccctgagatg gggtaaggag ggggatgagg ggtcatatct 2160 gttctcaggg aaagcaggag cccttctgga gcccttcagc agggtcaggg cccctcatct 2220 tcccctcctt tcccagagcc atcttcccag tccaccatcc ccatcgtggg cattgttgct 2280 ggcctggctg tcctagcagt tgtggtcatc ggagctgtgg tcgctactgt gatgtgtagg 2340 aggaagagct caggtaggga aggggtgagg ggtggggtct gggttttctt gtcccactgg 2400 gggtttcaag ccccaggtag aagtgttccc tgcctcatta ctgggaagca gcatccacac 2460 aggggctaac gcagcctggg accctgtgtg ccagcactta ctcttttgtg cagcacatgt 2520 gacaatgaag gacggatgta tcgccttgat ggttgtggtg ttggggtcct gattccagca 2580 ttcatgagtc aggggaaggt ccctgctaag gacagacctt aggagggcag ttggtccagg 2640 acccacactt gctttcctcg tgtttcctga tcctgccttg ggtctgtagt catacttctg 2700 gaaattcctt ttggttccaa gacgaggagg ttcctctaag atctcatggc cctgcttcct 2760 cccagtcccc tcacaggaca ttttcttccc acaggtggaa aaggagggag ctactctcag 2820 gctgcgtgta agtggtgggg gtgggagtgt ggaggagctc acccacccca taattcctcc 2880 tgtcccacgt ctcctgaggg ctctgaccag gtcctgtttt tgttctactc cagccagcga 2940 cagtgcccag ggctctgatg tgtctctcac agcttgaaaa ggtgagattc ttggggtcta 3000 gagtgggtgg ggtggcgggt ctgggggtgg gtggggcagt ggggaaaggc ctgggtaatg 3060 gagattcttt gattgggatg tttcgcgtgt gtggtgggct gttcagagtg tcatcactta 3120 ccatgactaa ccagaatttg ttcatgactg ttgttttctg tagcctgaga cagctgtctt 3180 gtgagggact gagatgcagg atttcttcac gcctcccctt tgtgacttca agagcctctg 3240 gcatctcttt ctgcaaaggc acctgaatgt gtctgcgtcc ctgttagcat aatgtgagga 3300 ggtggagaga cagcccaccc ttgtgtccac tgtgacccct 3340 // ID LN877367; SV 2; linear; genomic DNA; STD; HUM; 3323 BP. XX AC LN877367; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*40:130:02 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3323 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 54bd477b4455f9228d9ea55349d9d531. DR IMGT/HLA; HLA-B*40:130:02; HLA10521. XX FH Key Location/Qualifiers FH FT source 1..3323 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300133" FT /db_xref="taxon:9606" FT CDS join(285..357,486..755,1001..1276,1851..2126,2220..2336, FT 2778..2810,2917..2960) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*40:130:02" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A1D0C3I1" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A1D0C3I1" FT /protein_id="CUA55110.1" FT /translation="MRVTAPRTVLLLLSAALALTETWAGSHSMRYFHTAMSRPGRGEPR FT FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRESLRN FT LRGYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTA FT AQISQRKLEAARVAEQLRAYLEGECVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*40:130:02" FT /number=1 FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*40:130:02" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*40:130:02" FT /number=2 FT intron 756..1000 FT /gene="HLA-B" FT /allele="HLA-B*40:130:02" FT /number=2 FT exon 1001..1276 FT /gene="HLA-B" FT /allele="HLA-B*40:130:02" FT /number=3 FT intron 1277..1850 FT /gene="HLA-B" FT /allele="HLA-B*40:130:02" FT /number=3 FT exon 1851..2126 FT /gene="HLA-B" FT /allele="HLA-B*40:130:02" FT /number=4 FT intron 2127..2219 FT /gene="HLA-B" FT /allele="HLA-B*40:130:02" FT /number=4 FT exon 2220..2336 FT /gene="HLA-B" FT /allele="HLA-B*40:130:02" FT /number=5 FT intron 2337..2777 FT /gene="HLA-B" FT /allele="HLA-B*40:130:02" FT /number=5 FT exon 2778..2810 FT /gene="HLA-B" FT /allele="HLA-B*40:130:02" FT /number=6 FT intron 2811..2916 FT /gene="HLA-B" FT /allele="HLA-B*40:130:02" FT /number=6 FT exon 2917..>2960 FT /gene="HLA-B" FT /allele="HLA-B*40:130:02" FT /number=7 XX SQ Sequence 3323 BP; 613 A; 965 C; 1049 G; 696 T; 0 other; gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagcgtcg ccgtggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcac 300 cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc ggcagggaaa tggcctctgt ggggaggagc gaggggaccg caggcggggg 420 cgcaggaccc ggggagccgc gccgggagga gggtcgggcg ggtctcagct cctcctcgcc 480 cccaggctcc cactccatga ggtatttcca caccgccatg tcccggcccg gccgcgggga 540 gccccgcttc atcaccgtgg gctacgtgga cgacacgctg ttcgtgaggt tcgacagcga 600 cgccacgagt ccgaggaagg agccgcgggc gccatggata gagcaggagg ggccggagta 660 ttgggaccgg gagacacaga tctccaagac caacacacag acttaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgaccccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg ggactgggct gaccgcgggg ccggggccag ggtctcacac cctccagagg 1020 atgtacggct gcgacgtggg gccggacggg cgcctcctcc gcgggcataa ccagtacgcc 1080 tacgacggca aggattacat cgccctgaac gaggacctgc gctcctggac cgccgcggac 1140 acggcggctc agatctccca gcgcaagttg gaggcggccc gtgtggcgga gcagctgaga 1200 gcctacctgg agggcgagtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag 1260 acgctgcagc gcgcgggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc 1320 cggggatggc ctcccacgag aagaggagga aaatgggatc agcgctagaa tgtcgccctc 1380 cgttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc 1440 tagacaatta aggaatgacg tctctgagga aatggagggg aagacagtcc ctagaatact 1500 gatcaggggt cccctttgac ccctgcagca gccttgggaa ccgtgacttt tcctctcagg 1560 ccttgttctc tgcctcacac tcagtgtgtt tggggctctg attccagcac ttctgagtca 1620 ctttacctcc actcagatca ggagcagaag tccctgttcc ccgctcagag actcgaactt 1680 tccaatgaat aggagattat cccaggtgcc tgcgtccagg ctggtgtctg ggttctgtgc 1740 cccttcccca ccccaggtgt cctgtccatt ctcaggctgg tcacatgggt ggtcctaggg 1800 tgtcccatga aagatgcaaa gcgcctgaat tttctgactc ttcccatcag accccccaaa 1860 gacacacgtg acccaccacc ccatctctga ccatgaggcc accctgaggt gctgggccct 1920 gggtttctac cctgcggaga tcacactgac ctggcagcgg gatggcgagg accaaactca 1980 ggacactgag cttgtggaga ccagaccagc aggagataga accttccaga agtgggcagc 2040 tgtggtggtg ccttctggag aagagcagag atacacatgc catgtacagc atgaggggct 2100 gccgaagccc ctcaccctga gatggggtaa ggagggggat gaggggtcat atctcttctc 2160 agggaaagca ggagcccttc agcagggtca gggcccctca tcttcccctc ctttcccaga 2220 gccgtcttcc cagtccaccg tccccatcgt gggcattgtt gctggcctgg ctgtcctagc 2280 agttgtggtc atcggagctg tggtcgctgc tgtgatgtgt aggaggaaga gttcaggtag 2340 ggaaggggtg aggggtgggg tctgggtttt cttgtcccac tgggggtttc aagccccagg 2400 tagaagtgtt ccctgcctca ttactgggaa gcagcatgca cacaggggct aacgcagcct 2460 gggaccctgt gtgccagcac ttactctttt gtgcagcaca tgtgacaatg aaggatggat 2520 gtatcacctt gatggttgtg gtgttggggt cctgattcca gcattcatga gtcaggggaa 2580 ggtccctgct aaggacagac cttaggaggg cagttggtcc aggacccaca cttgctttcc 2640 tcgtgtttcc tgatcctgcc ctgggtctgt agtcatactt ctggaaattc cttttgggtc 2700 caagactagg aggttcctct aagatctcat ggccctgctt cctcccagtg ccctcacagg 2760 acattttctt cccacaggtg gaaaaggagg gagctactct caggctgcgt gtaagtggtg 2820 ggggtgggag tgtggaggag ctcacccacc ccataattcc tcctgtccca cgtctcctgc 2880 gggctctgac caggtcctgt ttttgttcta ctccaggcag cgacagtgcc cagggctctg 2940 atgtgtctct cacagcttga aaaggtgaga ttcttggggt ctagagtggg tggggtggcg 3000 ggtctggggg tgggtggggc agaggggaaa ggcctgggta atggggattc tttgattggg 3060 atgtttcgcg tgtgtggtgg gctgtttaga gtgtcatcgc ttaccatgac taaccagaat 3120 ttgttcatga ctgttgtttt ctgtagcctg agacagctgt cttgtgaggg actgagatgc 3180 aggatttctt cacgcctccc ctttgtgact tcaagagcct ctggcatctc tttctgcaaa 3240 ggcacctgaa tgtgtctgcg tccctgttag cataatgtga ggaggtggag agacagccca 3300 cccttgtgtc cactgtgacc cct 3323 // ID LN877368; SV 2; linear; genomic DNA; STD; HUM; 3354 BP. XX AC LN877368; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*07:01:01new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3354 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; e277dfdd78427c6c116636ed76d19f29. DR Ensembl-Gn; ENSG00000233841; homo_sapiens. DR Ensembl-Tr; ENST00000424832; homo_sapiens. DR IMGT/HLA; HLA-C*07:01:01:04; HLA14091. XX FH Key Location/Qualifiers FH FT source 1..3354 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300134" FT /db_xref="taxon:9606" FT CDS join(281..353,484..753,1004..1279,1867..2142,2267..2386, FT 2827..2859,2967..3014,3179..3183) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:O19617" FT /db_xref="HGNC:HGNC:4933" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:O19617" FT /protein_id="CUA55111.1" FT /translation="MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQNYKRQAQADRVSLRN FT LRGYYNQSEDGSHTLQRMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA FT AQITQRKLEAARAAEQLRAYLEGTCVEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY FT TCHMQHEGLQEPLTLSWEPSSQPTIPIMGIVAGLAVLVVLAVLGAVVTAMMCRRKSSGG FT KGGSCSQAACSNSAQGSDESLITCKA" FT exon <281..353 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01new" FT /number=1 FT intron 354..483 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01new" FT /number=1 FT exon 484..753 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01new" FT /number=2 FT intron 754..1003 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01new" FT /number=2 FT exon 1004..1279 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01new" FT /number=3 FT intron 1280..1866 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01new" FT /number=3 FT exon 1867..2142 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01new" FT /number=4 FT intron 2143..2266 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01new" FT /number=4 FT exon 2267..2386 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01new" FT /number=5 FT intron 2387..2826 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01new" FT /number=5 FT exon 2827..2859 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01new" FT /number=6 FT intron 2860..2966 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01new" FT /number=6 FT exon 2967..3014 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01new" FT /number=7 FT intron 3015..3178 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01new" FT /number=7 FT exon 3179..>3183 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01new" FT /number=8 XX SQ Sequence 3354 BP; 620 A; 992 C; 1043 G; 699 T; 0 other; gatcaggacg aagtcccagg tcccgggcgg ggctctcagg gtctcaggct ccaagggccg 60 tgtctgcatt ggggaggcgc cgcgttgggg attctccact cccctgagtt tcacttctcc 120 caacctgcgt cgggtccttc ttcctgaata ctcatgacgc gtccccaatt cccactccca 180 ttgggtgtcg ggttctagag aagccaatca gcgtctccgc agtcccggtt ctaaagtccc 240 cagtcaccca cccggactca cattctcccc agaggccgag atgcgggtca tggcgccccg 300 agccctcctc ctgctgctct cgggaggcct ggccctgacc gagacctggg cctgtgagtg 360 cggggttggg agggaagcgg cctctgcgga gaggagcgag gggcccgccc ggcgagggcg 420 caggacccgg ggagccgcgc agggaggtgg gtcgggcggg tctcagcccc tcctcgcccc 480 caggctccca ctccatgagg tatttcgaca ccgccgtgtc ccggcccggc cgcggagagc 540 cccgcttcat ctcagtgggc tacgtggacg acacgcagtt cgtgcggttc gacagcgacg 600 ccgcgagtcc gagaggggag ccgcgggcgc cgtgggtgga gcaggagggg ccggagtatt 660 gggaccggga gacacagaac tacaagcgcc aggcacaggc tgaccgagtg agcctgcgga 720 acctgcgcgg ctactacaac cagagcgagg acggtgagtg accccggccc ggggcgcagg 780 tcacgacccc tccccatccc ccacggacgg cccgggtcgc cccgagtctc cccgtctgag 840 atccacccca aggtggatct gcggaacccg cccagaccct cgaccggaga gagccccagt 900 cgcctttacc cggtttcatt ttcggtttag gccaaaatcc ccgcgggttg gtcggggcgg 960 ggcggggctc gggggactgg gctgaccgcg ggggcggggc cagggtctca caccctccag 1020 aggatgtatg gctgcgacct ggggcccgac gggcgcctcc tccgcgggta tgaccagtcc 1080 gcctacgacg gcaaggatta catcgccctg aacgaggacc tgcgctcctg gaccgccgcg 1140 gacaccgcgg ctcagatcac ccagcgcaag ttggaggcgg cccgtgcggc ggagcagctg 1200 agagcctacc tggagggcac gtgcgtggag tggctccgca gatacctgga gaacgggaag 1260 gagacgctgc agcgcgcagg taccaggggc agtggggagc cttccccatc tcctatagat 1320 ctcccgggat ggcctcccac gaggagggga ggaaaatggg atcagcactg gaatatcgcc 1380 ctcccttgaa tggagaatgg catgagtttt cctgagtttc ctctgagggc cccctctgct 1440 ctctaggaca attaagggat gaagtctctg aggaaatgga ggggaagaca gtccctggaa 1500 tactgatcag gggtctcctt tgaccacttt gaccactgca gcagctgtgg tcaggctgct 1560 gacctttctc tcaggccttg ttctctgcct cacactcaat gtgtctgaag gtttgattcc 1620 agcttttctg agtcctgcag cctccactca ggtcaggacc agaagtcgct gttcctccct 1680 cagagactag aactttccaa tgaataggag attatcccag gtgcctgtgt ccaggctggc 1740 gtctgggttc tgtgccgcct tccccacccc aggtgtcctg tccattctca ggatggtcac 1800 atgggcgctg ctggagtgtc ccaagagaga tgcaaagtgt ctgaattttc tgactcttcc 1860 cgtcagaacc cccaaagaca cacgtgaccc accaccccct ctctgaccat gaggccaccc 1920 tgaggtgctg ggccctgggc ttctaccctg cggagatcac actgacctgg cagcgggatg 1980 gggaggacca gacccaggac accgagcttg tggagaccag gccagcagga gatggaacct 2040 tccagaagtg ggcagctgtg gtggtgcctt ctggacaaga gcagagatac acgtgccata 2100 tgcagcacga ggggctgcaa gagcccctca ccctgagctg gggtaaggag gggaatgggg 2160 ggtcacatct cttatcagag aaagcagaag tccttctgga gcccttcagc cgggtcaggg 2220 ctgaggcttg ggggtcaggg cccctcacct tctcctcctt tcccagagcc atcttcccag 2280 cccaccatcc ccatcatggg catcgttgct ggcctggctg tcctggttgt cctagctgtc 2340 cttggagctg tggtcaccgc tatgatgtgt aggaggaaga gctcaggtag ggaaggggtg 2400 aagagcgggg tctgggtttt cttgtcccac tgggagtttc aagccccagg tagaagtgtg 2460 ccccgccttg ttactggaag caccatccac acatgggcca tcccagcctg ggaccctgtg 2520 tgccagcact tactcttttg tgaagcacat gtgacaatga aggacggatg tatcaccttg 2580 atgattatgg tgttggggtc ctgattccag cattcatgag tcaggggaag gtccctgcta 2640 aggacagacc ttaggagggc agttggtcca gaacccacaa ctgctttccc catgtttcct 2700 gatcctgccc tgggtctgca gtcgtagttc tggaaacttc tcttgggtcc aagactagga 2760 ggttccccta agatcacatg gccctgcctc ctcccagtcc cctcataggg cattttcttc 2820 ccacaggtgg aaaaggaggg agctgctctc aggctgcgtg taagtgatgg cggtgggcgt 2880 gtggaggagc tcacctactc cataattcct cttgtcccac atctcctgcg ggctctgacc 2940 aggtcttttt ttttgttcta ccccaggcag caacagtgcc cagggctctg atgagtctct 3000 catcacttgt aaaggtgaga ttctggggag ctgaagtggt cgggggtggg gcagagggaa 3060 aaggcctggg taatggggat tctttgattg ggacgtttcg agtgtgtggt gggccgttca 3120 gagtgtcatc acttaccatg actgacctga atttgttcat gactattgtg ttctgtagcc 3180 tgagacagct gcctgtgtgg gactgagatg caggatttct tcacacctct cctttgtgac 3240 ttcaagagcc tctggcatct ctttctgcaa aggcgtctga atgtgtctgc gttcctgtta 3300 gcataatgtg aggaggtgga gagacagccc acccccgtgt ccaccgtgac ccct 3354 // ID LN877369; SV 3; linear; genomic DNA; STD; HUM; 3327 BP. XX AC LN877369; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*52new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RC revised by author [07-OCT-2015] RP 1-3327 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; fa78b4f539fabdc28fb12678fbc658cc. DR IMGT/HLA; HLA-B*52:54; HLA14092. XX FH Key Location/Qualifiers FH FT source 1..3327 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300134" FT /db_xref="taxon:9606" FT CDS join(285..357,487..756,1002..1277,1853..2128,2233..2349, FT 2791..2823,2930..2973) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*52new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A1D0BST9" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A1D0BST9" FT /protein_id="CUA55112.1" FT /translation="MRVTAPRTVLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRI FT ALRYYNQSEAGSHTWQTMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQLRAYLEGLCVEWLRRHLENGKETLQRADPPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*52:54" FT /number=1 FT intron 358..486 FT /gene="HLA-B" FT /allele="HLA-B*52:54" FT /number=1 FT exon 487..756 FT /gene="HLA-B" FT /allele="HLA-B*52:54" FT /number=2 FT intron 757..1001 FT /gene="HLA-B" FT /allele="HLA-B*52:54" FT /number=2 FT exon 1002..1277 FT /gene="HLA-B" FT /allele="HLA-B*52:54" FT /number=3 FT intron 1278..1852 FT /gene="HLA-B" FT /allele="HLA-B*52:54" FT /number=3 FT exon 1853..2128 FT /gene="HLA-B" FT /allele="HLA-B*52:54" FT /number=4 FT intron 2129..2232 FT /gene="HLA-B" FT /allele="HLA-B*52:54" FT /number=4 FT exon 2233..2349 FT /gene="HLA-B" FT /allele="HLA-B*52:54" FT /number=5 FT intron 2350..2790 FT /gene="HLA-B" FT /allele="HLA-B*52:54" FT /number=5 FT exon 2791..2823 FT /gene="HLA-B" FT /allele="HLA-B*52:54" FT /number=6 FT intron 2824..2929 FT /gene="HLA-B" FT /allele="HLA-B*52:54" FT /number=6 FT exon 2930..>2973 FT /gene="HLA-B" FT /allele="HLA-B*52:54" FT /number=7 XX SQ Sequence 3327 BP; 620 A; 969 C; 1043 G; 695 T; 0 other; gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagagcct 60 tgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcggatatct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccgt cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggccggtg 360 agtgcggggt cgggagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg 420 gcgcaggacc tgaggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg 540 agccccgctt catcgcagtg ggctacgtgg acgacaccca gttcgtgagg ttcgacagcg 600 acgccgcgag tccgaggacg gagccccggg cgccatggat agagcaggag gggccggagt 660 attgggaccg ggagacacag atctccaaga ccaacacaca gacttaccga gagaacctgc 720 ggatcgcgct ccgctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgcctcc ctgaggccgc gggacccgcc cagaccctcg accggcgaga gccccaggcg 900 cgtttacccg gtttcatttt cagttgaggc caaaatcccc gcgggttggt cggggcgggg 960 cggggctcgg gggacggtgc tgaccgcggg gccggggcca gggtctcaca cttggcagac 1020 gatgtatggc tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcata accagtacgc 1080 ctacgacggc aaagattaca tcgccctgaa cgaggacctg cgctcctgga ccgccgcgga 1140 cacggcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgaggcgg agcagctgag 1200 agcctacctg gagggcctgt gcgtggagtg gctccgcaga cacctggaga acgggaagga 1260 gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320 ccggggatgg cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct 1380 cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440 ctaggacaat taagggatga cgtctctgag gaaatggagg ggaagacagt ccctagaata 1500 ctgatcaggg gtcccctttg acccctgcag cagccttggg aaccgtgact tttcctctca 1560 ggccttgttc tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt 1620 cactttacct ccactcagat caggagcaga agtccctgtt ccccgctcag agactcgaac 1680 tttccaatga ataggagatt atcccaggtg cctgcgtcca ggctggtgtc tgggttctgt 1740 gccccttccc cacaccaggt gtcctgtcca ttctcaggct ggtcacatgg gtggtcctag 1800 ggtgtcccat gagagatgca aagcgcctga attttctgac tcttcccatc agacccccca 1860 aagacacacg tgacccacca ccccgtctct gaccatgagg ccaccctgag gtgctgggcc 1920 ctgggcttct accctgcgga gatcacactg acctggcagc gggatggcga ggaccaaact 1980 caggacactg agcttgtgga gaccagacca gcaggagata gaaccttcca gaagtgggca 2040 gctgtggtgg tgccttctgg agaagagcag agatacacat gccatgtaca gcatgagggg 2100 ctgccgaagc ccctcaccct gagatggggt aaggaggggg atgaggggtc atatctcttc 2160 tcagggaaag caggagccct tctggagccc ttcagcaggg tcagggcccc tcgtcttccc 2220 ctcctttccc agagccatct tcccagtcca ccatccccat cgtgggcatt gttgctggcc 2280 tggctgtcct agcagttgtg gtcatcggag ctgtggtcgc tactgtgatg tgtaggagga 2340 agagctcagg tagggaaggg gtgaggggtg gggtctgggt tttcttgtcc cactgggggt 2400 ttcaagcccc aggtagaagt gttccctgcc tcattactgg gaagcagcat ccacacaggg 2460 gctaacgcag cctgggaccc tgtgtgccag cacttactct tttgtgcagc acatgtgaca 2520 atgaaggacg gatgtatcac cttgatggtt gtggtgttgg ggtcctgatt tcagcattca 2580 tgagtcaggg gaaggtccct gctaaggaca gaccttagga gggcagttgg tccaggaccc 2640 acacttgctt tcctcgtgtt tcctgatcct gccttgggtc tgtagtcata cttctggaaa 2700 ttccttttgg gtccaagacg aggaggttcc tctaagatct catggccctg cttcctccca 2760 gtcccctcac aggacatttt cttcccacag gtggaaaagg agggagctac tctcaggctg 2820 cgtgtaagtg gtgggggtgg gagtgtggag gagctcaccc accccataat tcctcctgtc 2880 ccacgtctcc tgcgggctct gaccaggtcc tgtttttgtt ctactccagc cagcgacagt 2940 gcccagggct ctgatgtgtc tctcacagct tgaaaaggtg agattcttgg ggtctagagt 3000 gggcgggggg ggcggggagg gggcagaggg gaaaggcctg ggtaatggag attctttgat 3060 tgggatgttt cgcgtgtgtc gtgggctgtt cagagtgtca tcacttacca tgactaacca 3120 gaatttgttc atgactgttg ttttctgtag cctgagacag ctgtcttgtg agggactgag 3180 atgcaggatt tcttcactcc tcccctttgt gacttcaaga gcctctggca tctctttctg 3240 caaaggcacc tgaatgtgtc tgcgtccctg ttagcataat gtgaggaggt ggagagacag 3300 cccacccttg tgtccactgt gacccct 3327 // ID LN877370; SV 2; linear; genomic DNA; STD; HUM; 3349 BP. XX AC LN877370; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*08:03:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3349 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 633f446c1fba5006f49dd2bbddb3ce5e. DR IMGT/HLA; HLA-C*08:03:01; HLA00447. XX FH Key Location/Qualifiers FH FT source 1..3349 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="HS67" FT /db_xref="taxon:9606" FT CDS join(284..356,487..756,1003..1278,1866..2141,2263..2382, FT 2822..2854,2962..3009,3174..3178) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*08:03:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q53X46" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q53X46" FT /protein_id="CUA55113.1" FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMRYFYTAVSRPGRGEPR FT FIAVGYVDDTQFVQFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN FT LRGYYNQSEAGSHTLQRMYGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAARTAEQLRAYLEGTCVEWLRRYLENRKKTLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWGPSSQPTIPIVGIVAGLAVLAVLAVLGAVMAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT exon <284..356 FT /gene="HLA-C" FT /allele="HLA-C*08:03:01" FT /number=1 FT intron 357..486 FT /gene="HLA-C" FT /allele="HLA-C*08:03:01" FT /number=1 FT exon 487..756 FT /gene="HLA-C" FT /allele="HLA-C*08:03:01" FT /number=2 FT intron 757..1002 FT /gene="HLA-C" FT /allele="HLA-C*08:03:01" FT /number=2 FT exon 1003..1278 FT /gene="HLA-C" FT /allele="HLA-C*08:03:01" FT /number=3 FT intron 1279..1865 FT /gene="HLA-C" FT /allele="HLA-C*08:03:01" FT /number=3 FT exon 1866..2141 FT /gene="HLA-C" FT /allele="HLA-C*08:03:01" FT /number=4 FT intron 2142..2262 FT /gene="HLA-C" FT /allele="HLA-C*08:03:01" FT /number=4 FT exon 2263..2382 FT /gene="HLA-C" FT /allele="HLA-C*08:03:01" FT /number=5 FT intron 2383..2821 FT /gene="HLA-C" FT /allele="HLA-C*08:03:01" FT /number=5 FT exon 2822..2854 FT /gene="HLA-C" FT /allele="HLA-C*08:03:01" FT /number=6 FT intron 2855..2961 FT /gene="HLA-C" FT /allele="HLA-C*08:03:01" FT /number=6 FT exon 2962..3009 FT /gene="HLA-C" FT /allele="HLA-C*08:03:01" FT /number=7 FT intron 3010..3173 FT /gene="HLA-C" FT /allele="HLA-C*08:03:01" FT /number=7 FT exon 3174..>3178 FT /gene="HLA-C" FT /allele="HLA-C*08:03:01" FT /number=8 XX SQ Sequence 3349 BP; 626 A; 984 C; 1039 G; 700 T; 0 other; gatcaggacg aagtcccagg tcccgggcgg ggctctcagg gtctcaggct ccaagggccg 60 tgtctgcact ggggaggcgc cgcgttgagg attctccact cccctgagtt tcacttcttc 120 ttccaacctg cgtcgggtcc ttcttcctga atactcatga cgcgtcccca attcccactc 180 ccattgggtg tcgggttcta gagaagccaa tcagcgtctc cgcagtcccg gttctaaagt 240 ccccagtcac ccacccggac tcggattctc cccagacgcc gagatgcggg tcatggcgcc 300 ccgaaccctc atcctgctgc tctcgggagc cctggccctg accgagacct gggcctgtga 360 gtgcgaggtt gggagggaaa cggcctctgc ggagaggagc gaggggcccg cccggcgagg 420 gcgcaggacc cggggagccg cgcagggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccgt gtcccggccc ggccgcggag 540 agccccgctt catcgcagtg ggctacgtgg acgacacgca gttcgtgcag ttcgacagcg 600 acgccgcgag tccaagaggg gagccgcggg cgccgtgggt ggagcaggag gggccggagt 660 attgggaccg ggagacacag aagtacaagc gccaggcaca gactgaccga gtgagcctgc 720 ggaacctgcg cggctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcccgac ccctccccat cccccacgga cggcccgggt cgccccgagt ctcccggtct 840 gagatccacc ccgaggctgc ggaacccgcc cagaccctcg accggagaga gccccagtca 900 cctttacccg gtttcatttt cagtttaggc caaaatcccc gcgggttggt cggggctggg 960 gcggggctcg ggggacgggg ctgaccacgg gggcggggcc agggtctcac accctccaga 1020 ggatgtatgg ctgcgacctg gggcccgacg ggcgcctcct ccgcgggtat aaccagttcg 1080 cctacgacgg caaggattac atcgccctga atgaggacct gcgctcctgg accgccgcgg 1140 acacggcggc tcagatcacc cagcgcaagt gggaggcggc ccgtacggcg gagcagctga 1200 gagcctacct ggagggcacg tgcgtggagt ggctccgcag atacctggag aacaggaaga 1260 agacgctgca gcgcgcgggt accaggggca gtggggagcc ttccccatct cctgtagatc 1320 tcccgggatg gcctcccacg aggaggggag gaaaatggga tcagcgctgg aatatcgccc 1380 tcccttgaat ggagaatggg atgagttttc ctgagtttcc tctgagggcc ccctctgctc 1440 tctaggacaa ttaagggatg aagtccttga ggaaatggag gggaagacag tccctggaat 1500 actgatcagg ggtccccttt gaccactttg accactgcag cagctgtggt caggctgctg 1560 acctttctct caggccttgt tctctgcctc acgctcaatg tgtttaaagg tttgattcca 1620 gcttttctga gtccttcggc ctccactcag gtcaggacca gaagtcgctg ttcctccctc 1680 agagactaga actttccaat gaataggaga ttatcccagg tgcctgtgtc caggctggcg 1740 tctgggttct gtgccccctt ccccacccca ggtgtcctgt ccattctcag gatggtcaca 1800 tgggcactgt tggagtgtcg caagagagat acaaagtgtc tgaattttct gactcttccc 1860 gtcagaacac ccaaagacac acgtgaccca ccatcccgtc tctgaccatg aggccaccct 1920 gaggtgctgg gccctgggct tctaccctgc ggagatcaca ctgacctggc agcgggatgg 1980 cgaggaccaa actcaggaca ccgagcttgt ggagaccagg ccagcaggag atggaacctt 2040 ccagaagtgg gcagctgtgg tggtgccttc tggagaagag cagagataca cgtgccatgt 2100 gcagcacgag gggctgccag agcccctcac cctgagatgg ggtaaggagg gggatgaggg 2160 gtcatgtgtc ttctcaggga aagcagaagt cctggagccc ttcagccggg tcagggctga 2220 ggcttggggg tcagggcccc tcaccttccc ctcctttccc agggccatct tcccagccca 2280 ccatccccat cgtgggcatc gttgctggcc tggctgtcct ggctgtccta gctgtcctag 2340 gagctgtgat ggctgttgtg atgtgtagga ggaagagctc aggtagggaa ggggtgagga 2400 gtggggtctg ggttttcttg tcccactggg agtttcaagc cccaggtaga agtgtgcccc 2460 acctcgttac tggaagcacc atccacacat gggccatccc agcctgggac cctgtgtgct 2520 agcacttact ctgttgtgaa gcacatgaca atgaaggaca gatgtatcac cttgatgatt 2580 atggtgttgg ggtccttgat tccagcattc atgagtcagg ggaaggtccc tgctaaggac 2640 agaccttagg agggcagttg ctccagaacc cacagctgct ttccccgtgt ttcctgatcc 2700 tgccctgggt ctgcagtcat agttctggaa acttctcttg ggtccaagac taggaggttc 2760 ccctaagatc gcatggccct gcctcctccc tgtcccctca cagggcattt tcttcccaca 2820 ggtggaaaag gagggagctg ctctcaggct gcgtgtaagt gatggcggtg ggcgtgtgga 2880 ggagctcacc caccccataa ttcctcttgt cccacatctc ctgcgggctc tgaccaggtc 2940 tttttttttg ttctacccca gccagcaaca gtgcccaggg ctctgatgag tctctcatcg 3000 cttgtaaagg tgagattctg gggagctgaa gtggtcgggg gtggggcaga gggaaaaggc 3060 ctaggtaatg gggatccttt gattgggacg tttcgaatgt gtggtgagct gttcagagtg 3120 tcatcactta ccatgactga cctgaatttg ttcatgacta ttgtgttctg tagcctgaga 3180 cagctgcctg tgtgggactg agatgcagga tttcttcaca cctttccttt gtgacttcaa 3240 gagcctctgg catctctttc tgcaaaggca tctgaatgtg tctgcgttcc tgttagcata 3300 atgtgaggag gtggagagac agcccacccc cgtgtccacc gtgacccct 3349 // ID LN877371; SV 2; linear; genomic DNA; STD; HUM; 3323 BP. XX AC LN877371; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*48:01:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3323 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 105f81689cb818d76fe1effd3d150157. DR IMGT/HLA; HLA-B*48:01:01:01; HLA00335. XX FH Key Location/Qualifiers FH FT source 1..3323 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="HS67" FT /db_xref="taxon:9606" FT CDS join(285..357,486..755,1001..1276,1851..2126,2220..2336, FT 2778..2810,2917..2960) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*48:01:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:D5L9J7" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:D5L9J7" FT /protein_id="CUA55114.1" FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRETQISKTNTQTYRESLRN FT LRGYYNQSEAGSHTLQSMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTA FT AQISQRKLEAARVAEQLRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWTAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*48:01:01" FT /number=1 FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*48:01:01" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*48:01:01" FT /number=2 FT intron 756..1000 FT /gene="HLA-B" FT /allele="HLA-B*48:01:01" FT /number=2 FT exon 1001..1276 FT /gene="HLA-B" FT /allele="HLA-B*48:01:01" FT /number=3 FT intron 1277..1850 FT /gene="HLA-B" FT /allele="HLA-B*48:01:01" FT /number=3 FT exon 1851..2126 FT /gene="HLA-B" FT /allele="HLA-B*48:01:01" FT /number=4 FT intron 2127..2219 FT /gene="HLA-B" FT /allele="HLA-B*48:01:01" FT /number=4 FT exon 2220..2336 FT /gene="HLA-B" FT /allele="HLA-B*48:01:01" FT /number=5 FT intron 2337..2777 FT /gene="HLA-B" FT /allele="HLA-B*48:01:01" FT /number=5 FT exon 2778..2810 FT /gene="HLA-B" FT /allele="HLA-B*48:01:01" FT /number=6 FT intron 2811..2916 FT /gene="HLA-B" FT /allele="HLA-B*48:01:01" FT /number=6 FT exon 2917..>2960 FT /gene="HLA-B" FT /allele="HLA-B*48:01:01" FT /number=7 XX SQ Sequence 3323 BP; 614 A; 963 C; 1043 G; 703 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccctgagtt tcacttcttc 120 tcccaacttg tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca cttcccactc 180 ccattgggta ttggatatct agagaagcca atcagcgtcg ccgcggtccc agttctaaag 240 tccccacgca cccacccgga ctcagagtct cctcagacgc cgagatgctg gtcatggcgc 300 cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc gggagggaaa tggcctctgc cgggaggagc gaggggaccg caggcggggg 420 cgcaggacct gaggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcacc 480 cccaggctcc cactccatga ggtatttcta cacctccgtg tcccggcccg gccgcgggga 540 gccccgcttc atctcagtgg gctacgtgga cgacacccag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggagta 660 ttgggaccgg gagacacaga tctccaagac caacacacag acttaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg ggactgggct gaccgcgggg ccggggccag ggtctcacac cctccagagc 1020 atgtacggct gcgacgtggg gccggacggg cgcctcctcc gcgggcataa ccagtacgcc 1080 tacgacggca aggattacat cgccctgaac gaggacctgc gctcctggac cgccgcggac 1140 acggcggctc agatctccca gcgcaagttg gaggcggccc gtgtggcgga gcagctgaga 1200 gcctacctgg agggcgagtg cgtggagtgg ctccgcagat acctggagaa cgggaaggac 1260 aagctggagc gcgctggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc 1320 cggggatggc ctcccacgag aagaggagga aaatgggatc agcgctagaa tgtcgccctc 1380 cgttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc 1440 tagacaatta aggaatgacg tctctgagga aatggagggg aagacagtcc ctagaatact 1500 gatcaggggt cccctttgac ccctgcagca gccttgggaa ccgtgacttt tcctctcagg 1560 ccttgttctc tgcctcacac tcagtgtgtt tggggctctg attccagcac ttctgagtca 1620 ctttacctcc actcagatca ggagcagaag tccctgttcc ccgctcagag actcgaactt 1680 tccaatgaat aggagattat cccaggtgcc tgcgtccagg ctggtgtctg ggttctgtgc 1740 cccttcccca ccccaggtgt cctgtccatt ctcaggctgg tcacatgggt ggtcctaggg 1800 tgtcccatga aagatgcaaa gcgcctgaat tttctgactc ttcccatcag accccccaaa 1860 gacacacgtg acccaccacc ccatctctga ccatgaggcc accctgaggt gctgggccct 1920 gggtttctac cctgcggaga tcacactgac ctggcagcgg gatggcgagg accaaactca 1980 ggacactgag cttgtggaga ccagaccagc aggagataga accttccaga agtggacagc 2040 tgtggtggtg ccttctggag aagagcagag atacacatgc catgtacagc atgaggggct 2100 gccgaagccc ctcaccctga gatggggtaa ggagggggat gaggggtcat atctcttctc 2160 agggaaagca ggagcccttc agcagggtca gggcccctca tcttcccctc ctttcccaga 2220 gccgtcttcc cagtccaccg tccccatcgt gggcattgtt gctggcctgg ctgtcctagc 2280 agttgtggtc atcggagctg tggtcgctgc tgtgatgtgt aggaggaaga gttcaggtag 2340 ggaaggggtg aggggtgggg tctgggtttt cttgtcccac tgggggtttc aagccccagg 2400 tagaagtgtt ccctgcctca ttactgggaa gcagcatgca cacaggggct aacgcagcct 2460 gggaccctgt gtgccagcac ttactctttt gtgcagcaca tgtgacaatg aaggatggat 2520 gtatcacctt gatggttgtg gtgttggggt cctgattcca gcattcatga gtcaggggaa 2580 ggtccctgct aaggacagac cttaggaggg cagttggtcc aggacccaca cttgctttcc 2640 tcgtgtttcc tgatcctgcc ctgggtctgt agtcatactt ctggaaattc cttttgggtc 2700 caagactagg aggttcctct aagatctcat ggccctgctt cctcccagtg ccctcacagg 2760 acattttctt cccacaggtg gaaaaggagg gagctactct caggctgcgt gtaagtggtg 2820 ggggtgggag tgtggaggag ctcacccacc ccataattcc tcctgtccca cgtctcctgc 2880 gggctctgac caggtcctgt ttttgttcta ctccaggcag cgacagtgcc cagggctctg 2940 atgtgtctct cacagcttga aaaggtgaga ttcttggggt ctagagtggg tggggtggcg 3000 ggtctggggg tgggtggggc agaggggaaa ggcctgggta atggggattc tttgattggg 3060 atgtttcgcg tgtgtggtgg gctgtttaga gtgtcatcgc ttaccatgac taaccagaat 3120 ttgttcatga ctgttgtttt ctgtagcctg agacagctgt cttgtgaggg actgagatgc 3180 aggatttctt cacgcctccc ctttgtgact tcaagagcct ctggcatctc tttctgcaaa 3240 ggcacctgaa tgtgtctgcg tccctgttag cataatgtga ggaggtggag agacagccca 3300 cccttgtgtc cactgtgacc cct 3323 // ID LN877372; SV 2; linear; genomic DNA; STD; HUM; 3312 BP. XX AC LN877372; XX DT 29-SEP-2016 (Rel. 130, Created) DT 29-SEP-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*67:01:01 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3312 RA Marsh S.; RT ; RL Submitted (28-JUL-2015) to the INSDC. RL HLA Informatics Group, ANRI, Royal Free Hospital, London, NW3 2QG, UNITED RL KINGDOM. XX RN [2] RA Marsh S.G.E.; RT "Full-length genomic HLA sequences"; RL Unpublished. XX DR MD5; 87814da89393ae312125f9b36af8bb77. DR IMGT/HLA; HLA-B*67:01:01; HLA00390. XX FH Key Location/Qualifiers FH FT source 1..3312 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="HS67" FT /db_xref="taxon:9606" FT CDS join(285..357,486..755,1002..1277,1850..2125,2219..2335, FT 2777..2809,2916..2959) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*67:01:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:C6K6J5" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:C6K6J5" FT /protein_id="CUA55115.1" FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRN FT LRGYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHNQFAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRTYLEGTCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon <285..357 FT /gene="HLA-B" FT /allele="HLA-B*67:01:01" FT /number=1 FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*67:01:01" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*67:01:01" FT /number=2 FT intron 756..1001 FT /gene="HLA-B" FT /allele="HLA-B*67:01:01" FT /number=2 FT exon 1002..1277 FT /gene="HLA-B" FT /allele="HLA-B*67:01:01" FT /number=3 FT intron 1278..1849 FT /gene="HLA-B" FT /allele="HLA-B*67:01:01" FT /number=3 FT exon 1850..2125 FT /gene="HLA-B" FT /allele="HLA-B*67:01:01" FT /number=4 FT intron 2126..2218 FT /gene="HLA-B" FT /allele="HLA-B*67:01:01" FT /number=4 FT exon 2219..2335 FT /gene="HLA-B" FT /allele="HLA-B*67:01:01" FT /number=5 FT intron 2336..2776 FT /gene="HLA-B" FT /allele="HLA-B*67:01:01" FT /number=5 FT exon 2777..2809 FT /gene="HLA-B" FT /allele="HLA-B*67:01:01" FT /number=6 FT intron 2810..2915 FT /gene="HLA-B" FT /allele="HLA-B*67:01:01" FT /number=6 FT exon 2916..>2959 FT /gene="HLA-B" FT /allele="HLA-B*67:01:01" FT /number=7 XX SQ Sequence 3312 BP; 619 A; 965 C; 1038 G; 690 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccctgagtt tcacttcttc 120 tcccaacttg tgtcgggtcc ttcttccagg atactcgtga cgcatcccca cttcccactc 180 ccattgggtg tcggatatct agagaagcca atcagcgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagagtct cctcagacgc cgagatgctg gtcatggcgc 300 cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc gggagggaaa tggcctctgc cgggaggagc gaggggaccg caggcggggg 420 cgcaggacct gaggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcta cacctccgtg tcccggcccg gccgcgggga 540 gccccgcttc atctcagtgg gctacgtgga cgacacgcag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggaata 660 ttgggaccgg aacacacaga tctacaaggc ccaggcacag actgaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg gggacggggc tgaccgcggg gccggggcca gggtctcaca ccctccagag 1020 gatgtacggc tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcata accagttcgc 1080 ctacgacggc aaggattaca tcgccctgaa cgaggacctg agctcctgga ccgcggcgga 1140 caccgcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcagctgag 1200 aacctacctg gagggcacgt gcgtggagtg gctccgcaga tacctggaga acgggaagga 1260 gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320 ccggggatgg cctccaacga gaagaagagg aaaatgggat cagcgctaga atgtcgccct 1380 cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440 ctaggacaat taagggatga cgtctctgag gaaatggagg ggaagacagt ccctagaata 1500 ctgatcaggg gtcccctttg acccctgcag cagccttggg aaccatgact tttcctctca 1560 ggccttgttc tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt 1620 cactttacct ccactcagat caggagcaga agtctctgtt ccccgctcag agactcgaac 1680 tttccaatga atagattatc ccaggtgcct gcgtccaggc tggtgtctgg gttctgtgcc 1740 ccttccccac cccaggtgtc ctgtccattc tcaggctggt cacatgggtg gtcctagggt 1800 gtcccatgag agatgcaaag cgcctgaatt ttctgactct tcccatcaga ccccccaaag 1860 acacatgtga cccaccaccc catctctgac catgaggcca ccctgaggtg ctgggccctg 1920 ggcttctacc ctgcggagat cacactgacc tggcagcggg atggcgagga ccaaactcag 1980 gacaccgagc ttgtggagac cagaccagca ggagacagaa ccttccagaa gtgggcagct 2040 gtggtggtgc cttctggaga agagcagaga tacacatgcc atgtacagca tgaggggctg 2100 ccgaagcccc tcaccctgag atggggtaag gagggggatg aggggtcata tctcttctca 2160 gggaaagcag gagcccttca gcagggtcag ggcccctcat cttcccctcc tttcccagag 2220 ccatcttccc agtccaccgt ccccatcgtg ggcattgttg ctggcctggc tgtcctagca 2280 gttgtggtca tcggagctgt ggtcgctgct gtgatgtgta ggaggaagag ttcaggtagg 2340 gaaggggtga ggggtggggt ctgggttttc ttgtcccact gggggtttca agccccaggt 2400 agaagtgttc cctgcatcat tactgggaag cagcatgcac acaggggcta acgcagcctg 2460 ggaccctgtg tgccagcact tactcttttg tgcagcacat gtgacaatga aggacggatg 2520 tatcaccttg atggttgtgg tgttggggtc ctgattccag cattcatgag tcaggggaag 2580 gtccctgcta aggacagacc ttaggagggc agttggtcca ggacccacac ttgctttcct 2640 cgtgtttcct gatcctgccc tgggtctgta gtcatacttc tggaaattcc ttttgggtcc 2700 aagactagga ggttcctcta agatctcatg gccctgcttc ctcccagtcc cctcacagga 2760 cattttcttc ccacaggtgg aaaaggaggg agctactctc aggctgcgtg taagtggtgg 2820 gggtgggagt gtggaggagc tcacccaccc cataattcct cctgtcccac gtctcctgtg 2880 ggctctgacc aggtcctgtt tttgttctac tccagccagc gacagtgccc agggctctga 2940 tgtgtctctc acagcttgaa aaggtgagat tcttggggtc tagagtgggc gggggggcgg 3000 ggagggggca gaggggaaag gcctgggtaa tggagattct ttgattggga tgtttcgcgt 3060 gtgtgatggg ctgttcagag tgtcatcact taccatgact aaccagaatt tgttcatgac 3120 tgttgttttc tgtagcctga gacagctgtc ttgtgaggga ctgagatgca ggatttcttc 3180 acgcctcccc tttgtgactt caagagcctc tggcatctct ttctgcaaag gcacctgaat 3240 gtgtctgcgt ccctgttagc ataatgtgag gaggtggaga gacagcccac ccttgtgtcc 3300 actgtgaccc ct 3312 // ID LN878288; SV 1; linear; genomic DNA; STD; HUM; 791 BP. XX AC LN878288; XX DT 05-OCT-2015 (Rel. 126, Created) DT 05-OCT-2015 (Rel. 126, Last updated, Version 1) XX DE Homo sapiens partial HLA-B gene for MHC class I antigen, allele DE HLA-B*57:01:01, exons 1-2 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-791 RA Loginova M.; RT ; RL Submitted (05-AUG-2015) to the INSDC. RL HLA-typing laboratory, Rosplasma, 104, Lenin st., Kirov, RUSSIA. XX RN [2] RA Loginova M., Paramonov I.; RT "Second new allele in locus B"; RL Unpublished. XX DR MD5; 8e9a5beec3423081bf7db73ab84c1351. XX FH Key Location/Qualifiers FH FT source 1..791 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT CDS join(<1..270,516..>791) FT /codon_start=3 FT /gene="HLA-B" FT /allele="HLA-B*57:01:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A0M7BGZ8" FT /protein_id="CUH74624.1" FT /translation="SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMA FT PWAPWIEQEGPEYWDGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGCDVGP FT DGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLC FT VEWLRRYLENGKETLQRA" FT exon 1..270 FT /gene="HLA-B" FT /allele="HLA-B*57:01:01" FT /number=2 FT gap 271..515 FT /estimated_length=245 FT exon 516..791 FT /gene="HLA-B" FT /allele="HLA-B*57:01:01" FT /number=3 XX SQ Sequence 791 BP; 105 A; 169 C; 196 G; 76 T; 245 other; gctcccactc catgaggtat ttctacaccg ccatgtcccg gcccggccgc ggggagcccc 60 gcttcatcgc agtgggctac gtggacgaca cccagttcgt gaggttcgac agcgacgccg 120 cgagtccgag gatggcgccc tgggcgccat ggatagagca ggaggggccg gagtattggg 180 acggggagac acggaacatg aaggcctccg cgcagactta ccgagagaac ctgcggatcg 240 cgctccgcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 420 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnggtct cacatcatcc aggtgatgta 540 tggctgcgac gtggggccgg acgggcgcct cctccgcggg catgaccagt ccgcctacga 600 cggcaaggat tacatcgccc tgaacgagga cctgagctcc tggaccgcgg cggacacggc 660 ggctcagatc acccagcgca agtgggaggc ggcccgtgtg gcggagcagc tgagagccta 720 cctggagggc ctgtgcgtgg agtggctccg cagatacctg gagaacggga aggagacgct 780 gcagcgcgcg g 791 // ID LN878289; SV 1; linear; genomic DNA; STD; HUM; 787 BP. XX AC LN878289; XX DT 05-OCT-2015 (Rel. 126, Created) DT 05-OCT-2015 (Rel. 126, Last updated, Version 1) XX DE Homo sapiens partial HLA-A gene for MHC class I antigen, allele DE HLA-A*01:01:01:01, exons 1-2 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-787 RA Loginova M.; RT ; RL Submitted (05-AUG-2015) to the INSDC. RL HLA-typing laboratory, Rosplasma, 104, Lenin st., Kirov, RUSSIA. XX RN [2] RA Loginova M., Paramonov I.; RT "New allele in locus A"; RL Unpublished. XX DR MD5; 03cac0f2aa892e10d075dd55f1406b90. DR IMGT/HLA; HLA-A*01:196; HLA14106. XX FH Key Location/Qualifiers FH FT source 1..787 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT CDS join(<1..270,512..>787) FT /codon_start=3 FT /gene="HLA-A" FT /allele="HLA-A*01:01:01:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A0M7BIB9" FT /protein_id="CUH74625.1" FT /translation="SHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQKME FT PRAPWIEQEGPEYWDQETRNMKAHSQTDRANLGTLRGYYNQSEDGSHTIQIMYGCDVGP FT DGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAVHEAEQRRVYLEGRC FT VDGLRRYLENGKETLQRT" FT exon 1..270 FT /gene="HLA-A" FT /allele="HLA-A*01:01:01:01" FT /number=2 FT gap 271..511 FT /estimated_length=241 FT exon 512..787 FT /gene="HLA-A" FT /allele="HLA-A*01:01:01:01" FT /number=3 XX SQ Sequence 787 BP; 113 A; 163 C; 195 G; 75 T; 241 other; gctcccactc catgaggtat ttcttcacat ccgtgtcccg gcccggccgc ggggagcccc 60 gcttcatcgc cgtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120 cgagccagaa gatggagccg cgggcgccgt ggatagagca ggaggggccg gagtattggg 180 accaggagac acggaatatg aaggcccact cacagactga ccgagcgaac ctggggaccc 240 tgcgcggcta ctacaaccag agcgaggacg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 420 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn ngttctcaca ccatccagat aatgtatggc 540 tgcgacgtgg ggccggacgg gcgcttcctc cgcgggtacc ggcaggacgc ctacgacggc 600 aaggattaca tcgccctgaa cgaggacctg cgctcttgga ccgcggcgga catggcagct 660 cagatcacca agcgcaagtg ggaggcggtc catgaggcgg agcagcggag agtctacctg 720 gagggccggt gcgtggacgg gctccgcaga tacctggaga acgggaagga gacgctgcag 780 cgcacgg 787 // ID LN878290; SV 1; linear; genomic DNA; STD; HUM; 990 BP. XX AC LN878290; XX DT 05-OCT-2015 (Rel. 126, Created) DT 05-OCT-2015 (Rel. 126, Last updated, Version 1) XX DE Homo sapiens partial HLA-A gene for MHC class I antigen, allele DE HLA-A*26:01:01:01, exons 1-3 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-990 RA Loginova M.; RT ; RL Submitted (05-AUG-2015) to the INSDC. RL HLA-typing laboratory, Rosplasma, 104, Lenin st., Kirov, RUSSIA. XX RN [2] RA Loginova M., Paramonov I.; RT "New allele in locus A"; RL Unpublished. XX DR MD5; bc3bac844b1d883d08ec1234fdab91c9. DR IMGT/HLA; HLA-A*26:117; HLA14108. XX FH Key Location/Qualifiers FH FT source 1..990 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT CDS join(1..73,204..473,715..>990) FT /gene="HLA-A" FT /allele="HLA-A*26:01:01:01" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A0M7BID4" FT /protein_id="CUH74626.1" FT /translation="MAVMAPRTLVLLLSGALVLTQTWAGSHSMRYFYTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAHSQTDRANLGT FT LRGYYNQSEDGSHTIQRMYGCDVGPDGRFLRGYQQDAYDGKDYIALNEDLRSWTAADMA FT AQITQRKWETAHEAEQWRAYLEGRCVEWLRRYLENGKETLQRT" FT exon 1..73 FT /gene="HLA-A" FT /allele="HLA-A*26:01:01:01" FT /number=1 FT gap 74..203 FT /estimated_length=130 FT exon 204..473 FT /gene="HLA-A" FT /allele="HLA-A*26:01:01:01" FT /number=2 FT gap 474..714 FT /estimated_length=241 FT exon 715..990 FT /gene="HLA-A" FT /allele="HLA-A*26:01:01:01" FT /number=3 XX SQ Sequence 990 BP; 118 A; 194 C; 220 G; 87 T; 371 other; atggccgtca tggcgccccg aaccctcgtc ctgctactct cgggggccct ggtcctgacc 60 cagacctggg cggnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 120 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 180 nnnnnnnnnn nnnnnnnnnn nnngctccca ctccatgagg tatttctaca cctccgtgtc 240 ccggcccggc cgcggggagc cccgcttcat cgccgtgggc tacgtggacg acacgcagtt 300 cgtgcggttc gacagcgacg ccgcgagcca gaggatggag ccgcgggcgc cgtggataga 360 gcaggagggg ccggagtatt gggaccggaa cacacggaat gtgaaggccc actcacagac 420 tgaccgagcg aacctgggga ccctgcgcgg ctactacaac cagagcgagg acgnnnnnnn 480 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 540 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 600 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 660 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnngttctc 720 acaccatcca gaggatgtat ggctgcgacg tggggccgga cgggcgcttc ctccgcgggt 780 accagcagga cgcttacgac ggcaaggatt acatcgccct gaacgaggac ctgcgctctt 840 ggaccgcggc ggacatggcg gctcagatca cccagcgcaa gtgggagacg gcccatgagg 900 cggagcagtg gagagcctac ctggagggcc ggtgcgtgga gtggctccgc agatacctgg 960 agaacgggaa ggagacgctg cagcgcacgg 990 // ID LN879372; SV 1; linear; genomic DNA; STD; HUM; 1523 BP. XX AC LN879372; XX DT 19-OCT-2015 (Rel. 126, Created) DT 19-OCT-2015 (Rel. 126, Last updated, Version 1) XX DE Homo sapiens partial HLA-C gene for MHC Class I antigen, allele LUMC-C-111 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1523 RA Kemps - Mols B.; RT ; RL Submitted (18-AUG-2015) to the INSDC. RL IHB, HLA laboratory - E3Q, Leiden University Medical Center, Postbus 9600, RL Leiden, 2300 RC, NETHERLANDS. XX RN [2] RA Kemps-Mols B.M., Anholts J.D.H., Roelen D.L.; RT "Partial HLA gene for MHC class I antigen"; RL Unpublished. XX DR MD5; 6e31c60541bf83dc46920491ccd45a86. DR IMGT/HLA; HLA-C*04:217N; HLA14110. XX FH Key Location/Qualifiers FH FT source 1..1523 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT CDS join(<1..270,371..646,747..1022,1123..1242,1343..1375, FT 1476..>1523) FT /codon_start=3 FT /transl_table=1 FT /gene="HLA-C" FT /allele="LUMC-C-111" FT /product="MHC Class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A0P1GLR6" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A0P1GLR6" FT /protein_id="CUH82785.1" FT /translation="SHSMRYFSTSVSWPGRGEPRFIAVGYVDDTQFVRFDSDAASPRGE FT PREPWVEQEGPEYWDRETQKYKRQAQADRVNLRKLRGYYNQSEDGSHTLQRMFGCDLGP FT DGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGTC FT VEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQWDGED FT QTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRWKPSSQPTI FT PIVGIVAGLAVLAVLAVLGAMVAVVMCRRKSSGGKGGSCSQAASSNSAQGSDESLIACK FT " FT exon 1..270 FT /gene="HLA-C" FT /allele="LUMC-C-111" FT /number=1 FT gap 271..370 FT /estimated_length=unknown FT exon 371..646 FT /gene="HLA-C" FT /allele="LUMC-C-111" FT /number=2 FT gap 647..746 FT /estimated_length=unknown FT exon 747..1022 FT /gene="HLA-C" FT /allele="LUMC-C-111" FT /number=3 FT gap 1023..1122 FT /estimated_length=unknown FT exon 1123..1242 FT /gene="HLA-C" FT /allele="LUMC-C-111" FT /number=4 FT gap 1243..1342 FT /estimated_length=unknown FT exon 1343..1375 FT /gene="HLA-C" FT /allele="LUMC-C-111" FT /number=5 FT gap 1376..1475 FT /estimated_length=unknown FT exon 1476..>1523 FT /gene="HLA-C" FT /allele="LUMC-C-111" FT /number=6 XX SQ Sequence 1523 BP; 208 A; 300 C; 351 G; 164 T; 500 other; gctcccactc catgaggtat ttctccacat ccgtgtcctg gcccggccgc ggggagcccc 60 gcttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120 cgagtccaag aggggagccg cgggagccgt gggtggagca ggaggggccg gagtattggg 180 accgggagac acagaagtac aagcgccagg cacaggctga ccgagtgaac ctgcggaaac 240 tgcgcggcta ctacaaccag agcgaggacg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn ggtctcacac cctccagagg atgtttggct gcgacctggg gccggacggg 420 cgcctcctcc gcgggtataa ccagttcgcc tacgacggca aggattacat cgccctgaac 480 gaggatctgc gctcctggac cgccgcggac acggcggctc agatcaccca gcgcaagtgg 540 gaggcggccc gtgaggcgga gcagcggaga gcctacctgg agggcacgtg cgtggagtgg 600 ctccgcagat acctggagaa cgggaaggag acgctgcagc gcgcggnnnn nnnnnnnnnn 660 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720 nnnnnnnnnn nnnnnnnnnn nnnnnnaaca cccaaagaca cacgtgaccc accatcccgt 780 ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac 840 actgacctgg cagtgggatg gggaggacca aactcaggac accgagcttg tggagaccag 900 gccagcagga gatggaacct tccagaagtg ggcagctgtg gtggtgcctt ctggagaaga 960 gcagagatac acgtgccatg ttcagcacga ggggctgccg gagcccctca ccctgagatg 1020 gannnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1080 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnagccgtct tcccagccca 1140 ccatccccat cgtgggcatc gttgctggcc tggctgtcct ggctgtccta gctgtcctag 1200 gagctatggt ggctgttgtg atgtgtagga ggaagagctc agnnnnnnnn nnnnnnnnnn 1260 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1320 nnnnnnnnnn nnnnnnnnnn nngtggaaaa ggagggagct gctctcaggc tgcgtnnnnn 1380 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1440 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnccagc aacagtgccc agggctctga 1500 tgagtctctc atcgcttgta aag 1523 // ID LN879373; SV 1; linear; genomic DNA; STD; HUM; 652 BP. XX AC LN879373; XX DT 19-OCT-2015 (Rel. 126, Created) DT 19-OCT-2015 (Rel. 126, Last updated, Version 1) XX DE Homo sapiens partial HLA-DRB3 gene for MHC Class II antigen, allele DE LUMC-DRB3-112 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-652 RA Kemps - Mols B.; RT ; RL Submitted (18-AUG-2015) to the INSDC. RL IHB, HLA laboratory - E3Q, Leiden University Medical Center, Postbus 9600, RL Leiden, 2300 RC, NETHERLANDS. XX RN [2] RA Roelen D.L., Kemps-Mols B.M., Anholts J.D.H., Claas F.H.J.; RT "Partial HLA gene for MHC class II antigen"; RL Unpublished. XX DR MD5; 025d1d03fb76e9dfbaa253e77e16827e. DR IMGT/HLA; HLA-DRB3*01:17; HLA14111. XX FH Key Location/Qualifiers FH FT source 1..652 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT CDS join(<1..270,371..>652) FT /codon_start=3 FT /transl_table=1 FT /gene="HLA-DRB3" FT /allele="LUMC-DRB3-112" FT /product="MHC Class II antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A0P1GLA1" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A0P1GLA1" FT /protein_id="CUH82786.1" FT /translation="RFLELRKSECHFFNGTERVRYLDRYFHNQEEFLRFDSDVGEYRAV FT TELGRPVAESWNSQKDLLEQKRGRVDNYCRPNYGVGESFTVQRRVHPQVTVYPAKTQPL FT QHHNLLVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSVTSALTVEW" FT exon 1..270 FT /gene="HLA-DRB3" FT /allele="LUMC-DRB3-112" FT /number=1 FT gap 271..370 FT /estimated_length=unknown FT exon 371..>652 FT /gene="HLA-DRB3" FT /allele="LUMC-DRB3-112" FT /number=2 XX SQ Sequence 652 BP; 120 A; 141 C; 183 G; 108 T; 100 other; cacgtttctt ggagctgcgt aagtctgagt gtcatttctt caatgggacg gagcgggtgc 60 ggtacctgga cagatacttc cataaccagg aggagttcct gcgcttcgac agcgacgtgg 120 gggagtaccg ggcggtgacg gagctggggc ggcctgtcgc cgagtcctgg aacagccaga 180 aggacctcct ggagcagaag cggggccggg tggacaatta ctgcagaccc aactacgggg 240 ttggtgagag cttcacagtg cagcggcgag nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn tccatcctca ggtgactgtg tatcctgcaa agacccagcc cctgcagcac 420 cacaacctcc tggtctgctc tgtgagtggt ttctatccag gcagcattga agtcaggtgg 480 ttccggaacg gccaggaaga gaaggctggg gtggtgtcca cgggcctgat ccagaatgga 540 gactggacct tccagaccct ggtgatgcta gaaacagttc ctcggagtgg agaggtttac 600 acttgccaag tggagcaccc aagcgtaacg agcgctctca cagtggaatg ga 652 // ID LN879374; SV 1; linear; genomic DNA; STD; HUM; 652 BP. XX AC LN879374; XX DT 19-OCT-2015 (Rel. 126, Created) DT 19-OCT-2015 (Rel. 126, Last updated, Version 1) XX DE Homo sapiens partial HLA-DRB5 gene for MHC Class II antigen, allele DE LUMC-DRB5-113 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-652 RA Kemps - Mols B.; RT ; RL Submitted (18-AUG-2015) to the INSDC. RL IHB, HLA laboratory - E3Q, Leiden University Medical Center, Postbus 9600, RL Leiden, 2300 RC, NETHERLANDS. XX RN [2] RA Roelen D.L., Kemps-Mols B.M., Anholts J.D.H., Claas F.H.J.; RT "Partial HLA gene for MHC class II antigen"; RL Unpublished. XX DR MD5; 315bb769f359c8fe719f7be62548e562. DR IMGT/HLA; HLA-DRB5*01:16; HLA14113. XX FH Key Location/Qualifiers FH FT source 1..652 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT CDS join(<1..270,371..>652) FT /codon_start=3 FT /transl_table=1 FT /gene="HLA-DRB5" FT /allele="LUMC-DRB5-113" FT /product="MHC Class II antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A0P1GL35" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A0P1GL35" FT /protein_id="CUH82787.1" FT /translation="RFLQQDKYECHFFNGTERVRFLHRDIYNQEEDLRFDSDVGEYRAV FT TELGRPDAEYWNSQKDFLEDRRAAVDTYCRHNYGVGESFTVQRRVEPKVTVYPARTQTL FT QHHNLLVCSVTGFYPGSIEVRWFRNSQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSVTSPLTVEW" FT exon 1..270 FT /gene="HLA-DRB5" FT /allele="LUMC-DRB5-113" FT /number=1 FT gap 271..370 FT /estimated_length=unknown FT exon 371..>652 FT /gene="HLA-DRB5" FT /allele="LUMC-DRB5-113" FT /number=2 XX SQ Sequence 652 BP; 129 A; 138 C; 180 G; 105 T; 100 other; cacgtttctt gcagcaggat aagtatgagt gtcatttctt caacgggacg gagcgggtgc 60 ggttcctgca cagagacatc tataaccaag aggaggactt gcgcttcgac agcgacgtgg 120 gggagtaccg ggcggtgacg gagctggggc ggcctgacgc tgagtactgg aacagccaga 180 aggacttcct ggaagacagg cgcgccgcgg tggacaccta ctgcagacac aactacgggg 240 ttggtgagag cttcacagtg cagcggcgag nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn ttgagcctaa ggtgactgtg tatcctgcaa ggacccagac cctgcagcac 420 cacaacctcc tggtctgctc tgtgactggt ttctatccag gcagcattga agtcaggtgg 480 ttccggaaca gccaggaaga gaaggctggg gtggtgtcca caggcctgat tcagaatgga 540 gactggacct tccagaccct ggtgatgctg gaaacagttc ctcgaagtgg agaggtttac 600 acctgccaag tggagcaccc aagcgtgacg agccctctca cagtggaatg ga 652 // ID LN879375; SV 1; linear; genomic DNA; STD; HUM; 652 BP. XX AC LN879375; XX DT 19-OCT-2015 (Rel. 126, Created) DT 19-OCT-2015 (Rel. 126, Last updated, Version 1) XX DE Homo sapiens partial HLA-DRB4 gene for MHC Class II antigen, allele DE LUMC-DRB4-114 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-652 RA Kemps - Mols B.; RT ; RL Submitted (18-AUG-2015) to the INSDC. RL IHB, HLA laboratory - E3Q, Leiden University Medical Center, Postbus 9600, RL Leiden, 2300 RC, NETHERLANDS. XX RN [2] RA Roelen D.L., Kemps-Mols B.M., Anholts J.D.H., Claas F.H.J.; RT "Partial HLA gene for MHC class II antigen"; RL Unpublished. XX DR MD5; 619f4c229bddd2904330409eeb1dd065. DR IMGT/HLA; HLA-DRB4*01:10; HLA14114. XX FH Key Location/Qualifiers FH FT source 1..652 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT CDS join(<1..270,371..>652) FT /codon_start=3 FT /transl_table=1 FT /gene="HLA-DRB4" FT /allele="LUMC-DRB4-114" FT /product="MHC Class II antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A0P1GKP1" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A0P1GKP1" FT /protein_id="CUH82788.1" FT /translation="RFLEQAKCECHFLNGTERVWNLIRYIYNQEEYTRYNSDLGEYQAV FT TELGRPDAEYWNSQKDLLERRRAEVDTYCRYNYGVVESFTVQRRVQPKVTVYPSKTQPL FT QHHNLLVCSVNGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSMMSPLTVQW" FT exon 1..270 FT /gene="HLA-DRB4" FT /allele="LUMC-DRB4-114" FT /number=1 FT gap 271..370 FT /estimated_length=unknown FT exon 371..>652 FT /gene="HLA-DRB4" FT /allele="LUMC-DRB4-114" FT /number=2 XX SQ Sequence 652 BP; 133 A; 137 C; 176 G; 106 T; 100 other; cacgtttctt ggagcaggct aagtgtgagt gtcatttcct caatgggacg gagcgagtgt 60 ggaacctgat cagatacatc tataaccaag aggagtacac gcgctacaac agtgacctgg 120 gggagtacca ggcggtgacg gagctggggc ggcctgacgc tgagtactgg aacagccaga 180 aggacctcct ggagcggagg cgggccgagg tggacaccta ctgcagatac aactacgggg 240 ttgtggagag cttcacagtg cagcggcgag nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn tccaacctaa ggtgactgtg tatccttcaa agacccagcc cctgcagcac 420 cacaacctcc tggtctgctc tgtgaatggt ttctatccag gcagcattga agtcaggtgg 480 ttccggaacg gccaggaaga gaaggctggg gtggtgtcca caggcctgat ccagaatgga 540 gactggacct tccagaccct ggtgatgctg gaaacagttc ctcggagtgg agaggtttac 600 acctgccaag tggagcatcc aagcatgatg agccctctca cggtgcaatg ga 652 // ID LN879376; SV 1; linear; genomic DNA; STD; HUM; 1195 BP. XX AC LN879376; XX DT 19-OCT-2015 (Rel. 126, Created) DT 19-OCT-2015 (Rel. 126, Last updated, Version 1) XX DE Homo sapiens partial HLA-C gene for MHC Class I antigen, allele LUMC-C-115 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1195 RA Kemps - Mols B.; RT ; RL Submitted (18-AUG-2015) to the INSDC. RL IHB, HLA laboratory - E3Q, Leiden University Medical Center, Postbus 9600, RL Leiden, 2300 RC, NETHERLANDS. XX RN [2] RA Kemps-Mols B.M., Anholts J.D.H., Roelen D.L.; RT "Partial HLA gene for MHC class I antigen"; RL Unpublished. XX DR MD5; 5fd5063765e838e178c0605295bca0e0. DR IMGT/HLA; HLA-C*12:167; HLA14117. XX FH Key Location/Qualifiers FH FT source 1..1195 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT CDS join(1..73,174..443,544..819,920..>1195) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="LUMC-C-115" FT /product="MHC Class I antigen" FT /function="antigen presenting molecule" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A0N7M1B0" FT /protein_id="CUH82789.1" FT /translation="MRVMAPRTLLLLLSGALALTETWACSHSMRYFYTAVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVSLRN FT LRGYYNQSEAGSHTLQWMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQWRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRW" FT exon 1..73 FT /gene="HLA-C" FT /allele="LUMC-C-115" FT /number=1 FT gap 74..173 FT /estimated_length=unknown FT exon 174..443 FT /gene="HLA-C" FT /allele="LUMC-C-115" FT /number=2 FT gap 444..543 FT /estimated_length=unknown FT exon 544..819 FT /gene="HLA-C" FT /allele="LUMC-C-115" FT /number=3 FT gap 820..919 FT /estimated_length=unknown FT exon 920..>1195 FT /gene="HLA-C" FT /allele="LUMC-C-115" FT /number=4 XX SQ Sequence 1195 BP; 177 A; 283 C; 310 G; 125 T; 300 other; atgcgggtca tggcgccccg aaccctcctc ctgctgctct cgggagccct ggccctgacc 60 gagacctggg cctnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 120 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnngctccca 180 ctccatgagg tatttctaca ccgccgtgtc ccggcccggc cgcggagagc cccgcttcat 240 cgcagtgggc tacgtggacg acacgcagtt cgtgcggttc gacagcgacg ccgcgagtcc 300 aagaggggag ccgcgggcgc cgtgggtgga gcaggagggg ccggagtatt gggaccggga 360 gacacagaag tacaagcgcc aggcacaggc tgaccgagtg agcctgcgga acctgcgcgg 420 ctactacaac cagagcgagg ccgnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 540 nnnggtctca caccctccag tggatgtatg gctgcgacct ggggcccgac gggcgcctcc 600 tccgcgggta tgaccagtcc gcctacgacg gcaaggatta catcgccctg aacgaggacc 660 tgcgctcctg gactgccgcg gacacggcgg ctcagatcac ccagcgcaag tgggaggcgg 720 cccgtgaggc ggagcagtgg agagcctacc tggagggcac gtgcgtggag tggctccgca 780 gatacctgga gaacgggaag gagacgctgc agcgcgcggn nnnnnnnnnn nnnnnnnnnn 840 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 900 nnnnnnnnnn nnnnnnnnna acacccaaag acacacgtga cccaccatcc cgtctctgac 960 catgaggcca ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc 1020 tggcagcggg atggcgagga ccaaactcag gacaccgagc ttgtggagac caggccagca 1080 ggagatggaa ccttccagaa gtgggcagct gtggtggtgc cttctggaga agagcagaga 1140 tacacgtgcc atgtgcagca cgaggggctg ccagagcccc tcaccctgag atggg 1195 // ID LN879377; SV 1; linear; genomic DNA; STD; HUM; 1195 BP. XX AC LN879377; XX DT 19-OCT-2015 (Rel. 126, Created) DT 19-OCT-2015 (Rel. 126, Last updated, Version 1) XX DE Homo sapiens partial HLA-C gene for MHC Class I antigen, allele LUMC-C-116 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1195 RA Kemps - Mols B.; RT ; RL Submitted (18-AUG-2015) to the INSDC. RL IHB, HLA laboratory - E3Q, Leiden University Medical Center, Postbus 9600, RL Leiden, 2300 RC, NETHERLANDS. XX RN [2] RA Kemps-Mols B.M., Anholts J.D.H., Roelen D.L.; RT "Partial HLA gene for MHC class I antigen"; RL Unpublished. XX DR MD5; c8e59b617417317de36829d9db688f97. DR IMGT/HLA; HLA-C*07:459; HLA14118. XX FH Key Location/Qualifiers FH FT source 1..1195 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT CDS join(1..73,174..443,544..819,920..>1195) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="LUMC-C-116" FT /product="MHC Class I antigen" FT /function="antigen presenting molecule" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A0P1H7A9" FT /protein_id="CUH82790.1" FT /translation="MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVSLRN FT LCGYYNQSEDGSHTFQRMYGCDLGPDGRLLRGYDQFAYDGKDYIALNEDLRSWTAADTA FT AQITQRKLEAARAAEQDRAYLEGTCVEWLRRYLENGKKTLQRAEPPKTHVTHHPLSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY FT TCHMQHEGLQEPLTLSW" FT exon 1..73 FT /gene="HLA-C" FT /allele="LUMC-C-116" FT /number=1 FT gap 74..173 FT /estimated_length=unknown FT exon 174..443 FT /gene="HLA-C" FT /allele="LUMC-C-116" FT /number=2 FT gap 444..543 FT /estimated_length=unknown FT exon 544..819 FT /gene="HLA-C" FT /allele="LUMC-C-116" FT /number=3 FT gap 820..919 FT /estimated_length=unknown FT exon 920..>1195 FT /gene="HLA-C" FT /allele="LUMC-C-116" FT /number=4 XX SQ Sequence 1195 BP; 177 A; 287 C; 307 G; 124 T; 300 other; atgcgggtca tggcgccccg agccctcctc ctgctgctct cgggaggcct ggccctgacc 60 gagacctggg cctnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 120 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnngctccca 180 ctccatgagg tatttcgaca ccgccgtgtc ccggcccggc cgcggagagc cccgcttcat 240 ctcagtgggc tacgtggacg acacgcagtt cgtgcggttc gacagcgacg ccgcgagtcc 300 gagaggggag ccccgggcgc cgtgggtgga gcaggagggg ccggagtatt gggaccggga 360 gacacagaag tacaagcgcc aggcacaggc tgaccgagtg agcctgcgga acctgtgcgg 420 ctactacaac cagagcgagg acgnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 540 nnnggtctca caccttccag aggatgtatg gctgcgacct ggggcccgac gggcgcctcc 600 tccgcgggta tgaccagttc gcctacgacg gcaaggatta catcgccctg aacgaggacc 660 tgcgctcctg gaccgccgcg gacaccgcgg ctcagatcac ccagcgcaag ttggaggcgg 720 cccgtgcggc ggagcaggac agagcctacc tggagggcac gtgcgtggag tggctccgca 780 gatacctgga gaacgggaag aagacgctgc agcgcgcggn nnnnnnnnnn nnnnnnnnnn 840 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 900 nnnnnnnnnn nnnnnnnnna acccccaaag acacacgtga cccaccaccc cctctctgac 960 catgaggcca ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc 1020 tggcagcggg atggggagga ccagacccag gacaccgagc ttgtggagac caggccagca 1080 ggagatggaa ccttccagaa gtgggcagct gtggtggtgc cttctggaca agagcagaga 1140 tacacgtgcc atatgcagca cgaggggctg caagagcccc tcaccctgag ctggg 1195 // ID LN879396; SV 2; linear; genomic DNA; STD; HUM; 1015 BP. XX AC LN879396; XX DT 12-OCT-2015 (Rel. 126, Created) DT 13-DEC-2016 (Rel. 131, Last updated, Version 2) XX DE Homo sapiens partial HLA-C gene for MHC class I antigen, allele HLA-C*16, DE exons 2-3 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1015 RA Vecchiato C.; RT ; RL Submitted (12-AUG-2015) to the INSDC. RL Ospedale di Bolzano, Lab. di Immunogenetica S.I.T, Via Lorenz Boehler, 5, RL 39100, ITALY. XX RN [2] RA Vecchiato C., Lochmann E.; RT "A new C*16 allele detected by SBT in an Italian Bone Marrow donor"; RL Unpublished. XX DR MD5; 57c99c1462b3c2a1ed9bb64b43d059e9. DR IMGT/HLA; HLA-C*16:97; HLA14959. XX FH Key Location/Qualifiers FH FT source 1..1015 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT CDS <1..>1015 FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*16" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A0M7BEQ1" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A0M7BEQ1" FT /protein_id="CUH82817.2" FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMRYFYTAVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN FT LRGYYNQSEAGSHTLQWMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAARAAEQQRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHLVSDHD FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSS" FT exon 1..73 FT /gene="HLA-C" FT /allele="HLA-C*16" FT /number=1 FT exon 74..343 FT /gene="HLA-C" FT /allele="HLA-C*16" FT /number=2 FT exon 344..619 FT /gene="HLA-C" FT /allele="HLA-C*16" FT /number=3 FT exon 620..895 FT /gene="HLA-C" FT /allele="HLA-C*16" FT /number=4 FT exon 896..1015 FT /gene="HLA-C" FT /allele="HLA-C*16" FT /number=5 XX SQ Sequence 1015 BP; 195 A; 319 C; 345 G; 156 T; 0 other; atgcgggtca tggcgccccg aaccctcatc ctgctgctct cgggagccct ggccctgacc 60 gagacctggg cctgctccca ctccatgagg tatttctaca ccgccgtgtc ccggcccggc 120 cgcggagagc cccgcttcat cgcagtgggc tacgtggacg acacgcagtt cgtgcggttc 180 gacagcgacg ccgcgagtcc aagaggggag ccgcgggcgc cgtgggtgga gcaggagggg 240 ccggagtatt gggaccggga gacacagaag tacaagcgcc aggcacagac tgaccgagtg 300 agcctgcgga acctgcgcgg ctactacaac cagagcgagg ccgggtctca caccctccag 360 tggatgtatg gctgcgacct ggggcccgac gggcgcctcc tccgcgggta tgaccagtcc 420 gcctacgacg gcaaggatta catcgccctg aacgaggacc tgcgctcctg gaccgccgcg 480 gacacggcgg ctcagatcac ccagcgcaag tgggaggcgg cccgtgcggc ggagcagcag 540 agagcctacc tggagggcac gtgcgtggag tggctccgca gatacctgga gaacgggaag 600 gagacgctgc agcgcgcgga acacccaaag acacacgtga cccaccatct cgtctctgac 660 catgacgcca ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc 720 tggcagcggg atggcgagga ccaaactcag gacaccgagc ttgtggagac caggccagca 780 ggagatggaa ccttccagaa gtgggcagct gtggtggtgc cttctggaga agagcagaga 840 tacacgtgcc atgtgcagca cgaggggctg ccggagcccc tcaccctgag atgggagcca 900 tcttcccagc ccaccatccc catcgtgggc atcgttgctg gcctggctgt cctggctgtc 960 ctagctgtcc taggagctgt ggtggctgtt gttatgtgta ggaggaagag ctcag 1015 // ID LN879397; SV 1; linear; genomic DNA; STD; HUM; 1731 BP. XX AC LN879397; XX DT 19-SEP-2015 (Rel. 126, Created) DT 19-SEP-2015 (Rel. 126, Last updated, Version 1) XX DE Homo sapiens AQP1 gene for Colton blood group antigen, isolate 2013-004509 DE and 2013-013097, allele CO*01.148A XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1731 RA Henny C.; RT ; RL Submitted (13-AUG-2015) to the INSDC. RL Research and Development, Blood Transfusion Service SRC Bern Ltd., RL Murtenstrasse 133, , 3008 Bern, SWITZERLAND. XX RN [2] RA Henny C., Graber J., Gowland P.L., Hustinx H., Lejon Crottet S., RA Niederhauser C.; RT "First observation of a novel CO*01 allele, CO*01.148A, in a blood donor in RT Switzerland"; RL Unpublished. XX DR MD5; 86731822e7f1e3e35f281ba37a4ce7cf. XX FH Key Location/Qualifiers FH FT source 1..1731 FT /organism="Homo sapiens" FT /isolate="2013-004509" FT /mol_type="genomic DNA" FT /tissue_type="blood" FT /db_xref="taxon:9606" FT exon 1..415 FT /gene="AQP1" FT /allele="CO*01.148A" FT /number=1 FT CDS join(32..415,627..791,1125..1205,1478..1657) FT /codon_start=1 FT /transl_table=1 FT /gene="AQP1" FT /allele="CO*01.148A" FT /product="aquaporin 1, Colton blood group antigen" FT /db_xref="GOA:A0A0M7BEW0" FT /db_xref="InterPro:IPR000425" FT /db_xref="InterPro:IPR022357" FT /db_xref="InterPro:IPR023271" FT /db_xref="InterPro:IPR023274" FT /db_xref="InterPro:IPR034294" FT /db_xref="UniProtKB/TrEMBL:A0A0M7BEW0" FT /protein_id="CUI25750.1" FT /translation="MASEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTA FT VQDNMKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVG FT AIVATAILSGITSSLTGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRD FT LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGAL FT AVLIYDFILAPRSSDLTDRVKVWTSGQVEEYDLDADDINSRVEMKPK" FT misc_feature 179 FT /note="148G>A. This mutation leads to amino acid change FT Val50Met." FT intron 416..626 FT /gene="AQP1" FT /allele="CO*01.148A" FT /number=1 FT gap 424..523 FT /estimated_length=unknown FT exon 627..791 FT /gene="AQP1" FT /allele="CO*01.148A" FT /number=2 FT intron 792..1124 FT /gene="AQP1" FT /allele="CO*01.148A" FT /number=2 FT exon 1125..1205 FT /gene="AQP1" FT /allele="CO*01.148A" FT /number=3 FT intron 1206..1477 FT /gene="AQP1" FT /allele="CO*01.148A" FT /number=3 FT gap 1304..1403 FT /estimated_length=unknown FT exon 1478..1731 FT /gene="AQP1" FT /allele="CO*01.148A" FT /number=4 XX SQ Sequence 1731 BP; 245 A; 488 C; 478 G; 320 T; 200 other; gcagcggtct caggccaagc cccctgccag catggccagc gagttcaaga agaagctctt 60 ctggagggca gtggtggccg agttcctggc cacgaccctc tttgtcttca tcagcatcgg 120 ttctgccctg ggcttcaaat acccggtggg gaacaaccag acggcggtcc aggacaacat 180 gaaggtgtcg ctggccttcg ggctgagcat cgccacgctg gcgcagagtg tgggccacat 240 cagcggcgcc cacctcaacc cggctgtcac actggggctg ctgctcagct gccagatcag 300 catcttccgt gccctcatgt acatcatcgc ccagtgcgtg ggggccatcg tcgccaccgc 360 catcctctca ggcatcacct cctccctgac tgggaactcg cttggccgca atgacgtgag 420 tggnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnngcccttc atgcctgggc 540 ctgggaggcc tgggtatcct tggggtcctg ggacacagtc cctgcctacc ctcctcacca 600 gtcctcacca cctctctccc ctgcagctgg ctgatggtgt gaactcgggc cagggcctgg 660 gcatcgagat catcgggacc ctccagctgg tgctatgcgt gctggctact accgaccgga 720 ggcgccgtga ccttggtggc tcagcccccc ttgccatcgg cctctctgta gcccttggac 780 acctcctggc tgtgagtcag gggccctccc agatggaggt gggggaaggg agggcggggg 840 ctggtggggt gccctgccat gggcagccag tgggactccc gacagggctc ttgccattgg 900 gtggaggatg gcgggtcagc gctgggggct gggggcaggg tcctgccctg gagaggagca 960 cagggacctc ctgcccagct tggggtcagc actcctcttt ccctgggtct cattgtcccc 1020 caccctgatt gttctctttc tccctccaac ctctccctcc tctcactctc tcttcaccta 1080 tgactctctg ccttcgcccc tccctctgtt tctttccctc acagattgac tacactggct 1140 gtgggattaa ccctgctcgg tcctttggct ccgcggtgat cacacacaac ttcagcaacc 1200 actgggtagg agacccacgg ggggtggggt gggaagcttt ggtgtcccat ggtaagcctg 1260 accccaccct cacagtgtcc cttcctgttc tggaggctct gggnnnnnnn nnnnnnnnnn 1320 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1380 nnnnnnnnnn nnnnnnnnnn nnntgtgggg taacctaggg aacgcttccc aggggctttt 1440 gagtggagcc ctctgaacac acctgctctg ttcctagatt ttctgggtgg ggccattcat 1500 cgggggagcc ctggctgtac tcatctacga cttcatcctg gccccacgca gcagtgacct 1560 cacagaccgc gtgaaggtgt ggaccagcgg ccaggtggag gagtatgacc tggatgccga 1620 cgacatcaac tccagggtgg agatgaagcc caaatagaag gggtctggcc cgggcatcca 1680 cgtagggggc aggggcaggg gcgggcggag ggaggggagg ggtgaaatcc a 1731 // ID LN879398; SV 1; linear; genomic DNA; STD; HUM; 1696 BP. XX AC LN879398; XX DT 29-SEP-2015 (Rel. 126, Created) DT 29-SEP-2015 (Rel. 126, Last updated, Version 1) XX DE Homo sapiens partial HLA-C gene for MHC class I antigen, allele HLA-C*05 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1696 RA Peixoto M.; RT ; RL Submitted (13-AUG-2015) to the INSDC. RL Imunogenetica, IPST, Roa Dr. Roberto Frias, 4200-467 , Oporto, PORTUGAL. XX RN [2] RA Peixoto M., Oliveira S., Ferreira R., Teixeira J., Dias M., Mota J.; RT "A novel HLA-C between Portuguese Population"; RL Unpublished. XX DR MD5; 02c0a0862a3681a1c53c304c97d499d0. DR IMGT/HLA; HLA-C*05:124; HLA14104. XX FH Key Location/Qualifiers FH FT source 1..1696 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT CDS join(1..73,174..443,544..819,920..1195,1296..1415, FT 1516..1548,1649..>1696) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*05" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:A0A0M7BFM3" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A0M7BFM3" FT /protein_id="CUH82818.1" FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMRYFYTAVSRPGRGEPR FT FIAVGYVDDTQFVQFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVNLRK FT LRGYYNQSEAGSHTLQRMYGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADKA FT AQITQRKWEAAREAEQRRAYMEGTCVEWLRRYLENGKKTLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWGPSSQPTIPIVGIVAGLAVLAVLAVLGAVMAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACK" FT exon <1..73 FT /gene="HLA-C" FT /allele="HLA-C*05" FT /number=1 FT gap 74..173 FT /estimated_length=unknown FT exon 174..443 FT /gene="HLA-C" FT /allele="HLA-C*05" FT /number=2 FT gap 444..543 FT /estimated_length=unknown FT exon 544..819 FT /gene="HLA-C" FT /allele="HLA-C*05" FT /number=3 FT gap 820..919 FT /estimated_length=unknown FT exon 920..1195 FT /gene="HLA-C" FT /allele="HLA-C*05" FT /number=4 FT gap 1196..1295 FT /estimated_length=unknown FT exon 1296..1415 FT /gene="HLA-C" FT /allele="HLA-C*05" FT /number=5 FT gap 1416..1515 FT /estimated_length=unknown FT exon 1516..1548 FT /gene="HLA-C" FT /allele="HLA-C*05" FT /number=6 FT gap 1549..1648 FT /estimated_length=unknown FT exon 1649..>1696 FT /gene="HLA-C" FT /allele="HLA-C*05" FT /number=7 XX SQ Sequence 1696 BP; 222 A; 333 C; 369 G; 172 T; 600 other; atgcgggtca tggcgccccg aaccctcatc ctgctgctct cgggagccct ggccctgacc 60 gagacctggg cctnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 120 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnngctccca 180 ctccatgagg tatttctaca ccgccgtgtc ccggcccggc cgcggagagc cccgcttcat 240 cgcagtgggc tacgtggacg acacgcagtt cgtgcagttc gacagcgacg ccgcgagtcc 300 aagaggggag ccgcgggcgc cgtgggtgga gcaggagggg ccggagtatt gggaccggga 360 gacacagaag tacaagcgcc aggcacagac tgaccgagtg aacctgcgga aactgcgcgg 420 ctactacaac cagagcgagg ccgnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 540 nnnggtctca caccctccag aggatgtatg gctgcgacct ggggcccgac gggcgcctcc 600 tccgcgggta taaccagttc gcctacgacg gcaaggatta catcgccctg aatgaggacc 660 tgcgctcctg gaccgccgcg gacaaggcgg ctcagatcac ccagcgcaag tgggaggcgg 720 cccgtgaggc ggagcagcgg agagcctaca tggagggcac gtgcgtggag tggctccgca 780 gatacctgga gaacgggaag aagacgctgc agcgcgcggn nnnnnnnnnn nnnnnnnnnn 840 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 900 nnnnnnnnnn nnnnnnnnna acacccaaag acacacgtga cccaccatcc cgtctctgac 960 catgaggcca ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc 1020 tggcagcggg atggcgagga ccaaactcag gacaccgagc ttgtggagac caggccagca 1080 ggagatggaa ccttccagaa gtgggcagct gtggtggtgc cttctggaga agagcagaga 1140 tacacgtgcc atgtgcagca cgaggggctg ccagagcccc tcaccctgag atgggnnnnn 1200 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1260 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnggcca tcttcccagc ccaccatccc 1320 catcgtgggc atcgttgctg gcctggctgt cctggctgtc ctagctgtcc taggagctgt 1380 gatggctgtt gtgatgtgta ggaggaagag ctcagnnnnn nnnnnnnnnn nnnnnnnnnn 1440 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1500 nnnnnnnnnn nnnnngtgga aaaggaggga gctgctctca ggctgcgtnn nnnnnnnnnn 1560 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1620 nnnnnnnnnn nnnnnnnnnn nnnnnnnncc agcaacagtg cccagggctc tgatgagtct 1680 ctcatcgctt gtaaag 1696 // ID LN880513; SV 1; linear; genomic DNA; STD; HUM; 2387 BP. XX AC LN880513; XX DT 18-OCT-2016 (Rel. 130, Created) DT 18-OCT-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens partial GYPB-A-B fusion gene for blood group system MNSs, DE Mur-like, exons 2-4 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2387 RA Gassner C.; RT ; RL Submitted (28-AUG-2015) to the INSDC. RL Department of Molecular Diagnostics and Research (MOC), Blood Transfusion RL Service Zurich, Swiss Red Cross, Ruetistrasse 19, Zurich-Schlieren, 8952, RL SWITZERLAND. XX RN [2] RA Meyer S., Vollmert C., Trost N., Sigurdardottir S., Portmann C., RA Gottschalk J., Ries J., Markovic A., Infanti L., Buser A., RA Amar el Dusouqui S., Rigal E., Castelli D., Weingand B., Maier A., RA Sarraj A., Braisch M.C., Thierbach J., Frey B.M., Gassner C.; RT "MALDI-TOF MS based GYPA and GYPB genotyping of 5800 MNSs phenotyped Swiss RT blood donors and evidence for two new St(a) positive haplotypes prevalent RT in Caucasians"; RL Unpublished. XX RN [3] RA Gassner C., Meyer S., Trost N., Sigurdardottir S., Portmann C.; RT "GYPB, GYPB-A and GYPB-AB variants"; RL Unpublished. XX DR MD5; d6f06e92fb3884737f3dfb6f85187d99. XX FH Key Location/Qualifiers FH FT source 1..2387 FT /organism="Homo sapiens" FT /chromosome="4" FT /map="4q28-q31" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /tissue_type="blood" FT /db_xref="taxon:9606" FT CDS join(<460..558,1268..1363,2297..>2335) FT /codon_start=3 FT /transl_table=1 FT /gene="GYPB-A-B fusion gene" FT /allele="GYP.501(B-A(3)-B)variant" FT /product="blood group system MNSs, Mur-like" FT /db_xref="GOA:A0A1E1JP26" FT /db_xref="InterPro:IPR001195" FT /db_xref="UniProtKB/TrEMBL:A0A1E1JP26" FT /protein_id="CUI25646.1" FT /translation="IVSISALSTTEVAMHTSTSSSVTKSYISSQTNDTHKRDTYAATPR FT AHEVSEISVRTVYPPEEETGETGQLVHRFTVP" FT exon 460..558 FT /gene="GYPB-A-B fusion gene" FT /allele="GYP.501(B-A(3)-B)variant" FT /number=2 FT intron 559..1267 FT /gene="GYPB-A-B fusion gene" FT /allele="GYP.501(B-A(3)-B)variant" FT /number=2 FT exon 1268..1363 FT /gene="GYPB-A-B fusion gene" FT /allele="GYP.501(B-A(3)-B)variant" FT /number=3 FT intron 1364..2296 FT /gene="GYPB-A-B fusion gene" FT /allele="GYP.501(B-A(3)-B)variant" FT /number=3 FT exon 2297..2335 FT /gene="GYPB-A-B fusion gene" FT /allele="GYP.501(B-A(3)-B)variant" FT /number=4 XX SQ Sequence 2387 BP; 772 A; 476 C; 441 G; 698 T; 0 other; ttccaaaatg caacttcaag ttaccccttt ataagcataa taacaataat acccaacata 60 tatgtaatgc tctttatgtg tcaagtacta tactaacaca tacacatcac atacacacac 120 ataccacata cacacacata tttaaactaa ttcgttctca caatgacatt ttgaggcaag 180 tattactatt gtacagatga gaaaaccaag gcacacttta tctgtaaacc tctgctgtac 240 aaaaattctg gaggggcttc tggcccctta attttaaaat aaggccaata atacaatact 300 taccacgcag caattctcta aagattatgt aagatatata ctaaagcgct tagctcaggg 360 actggaggga tgtgagagga atttgtcttt tgtgatatgc tttatggtct gctcagtcac 420 ctcgttctta atccctttct caacttctat tttatacaga aattgtgagc atatcagcat 480 taagtaccac tgaggtggca atgcacactt caacctcttc ttcagtcaca aagagttaca 540 tctcatcaca gacaaatggt ttgttttcat ttttattttt aaattgtggc tccgaaatga 600 tttttgtgat gcaaccctat tttaggggac ctgtcactgc agagaaactg acaaacactg 660 agaaatgcga gctaagtaga cacagcctac taagtagaca caattcttac tacagaggaa 720 ttctagcctc tgaaatatct cacagaaata atactgtgag ttaaagaaat taaaacaatg 780 tggcaaagca cagaaatgat acatgtgacc atgaaatagt gggccagata aaggggacct 840 aatagtgcgg tggtgcggag ggtctgtggg caaaatgagt tcagctcaga cctgggctca 900 gctctatccc agctgctgac ccagggtgag ttgccctgca gggtttctat cccattaatt 960 ttaaaatggg gccaataaca cagtacttat ctcacagcat ttctctaaag gctaaataag 1020 aagaagtgtc taaaagttat tagctcagag cctcacacat tctcagtgac tgataaacaa 1080 taagcaaagc tgggtgctga gataagagta atctggtggc agtctctctc gttagttttc 1140 aggggagaag aagaaattct ggagccgctg ctgggaggga tgtgggagag tttgtctttc 1200 ataatacgct ctatgtccac gcagtcacct cattcttgac ccctttctca acttctctta 1260 tatgcagata cgcacaaacg ggacacatat gcagccactc ctagagctca tgaagtttca 1320 gaaatttctg ttagaactgt ttaccctcca gaagaggaaa ccggtatgtt cttagtttta 1380 aatagttgct ctggagtcat tgttgtgatt gaactctatt tacacgagct gtaactcatg 1440 acagttctca agccttcgtg acagaaaacc catctctttt actccaaagc ccatatagca 1500 cccacaacta ttaactgtga ccaagaaaga gaaggcaagc cccaattaac ctttgtacgt 1560 aaagcctaaa gaatgaaaaa atatacctga atcctcaatc atcaaacagc atagtatata 1620 ctaagtaatt tgtaataatt aaactctaga aaattgtgtg gctttggtat aagagagctt 1680 catgacataa aatggcaagt ggagacagag acaaaagtag gatgtggact gagagggaag 1740 gttagcacag gtggaacagt aaggcaacca tactatcaat tgctactgac atagaatcca 1800 gagagactat tggcaaaagc tcaaatgaga cacagtaaca gtttagattc atacagtggc 1860 tatggcataa atcagaaaat tgatagccgc atgacccttc tttgcatggg actggcatct 1920 ctgtggagta atggctccat atgcctcctt tcttctcatt attttttaca tgttttaaaa 1980 atgcattgct tcttgtgtaa gtcaataagt gattcttcca atactttctc attcctttcc 2040 cctcagttat gagacaattt gcttatttct catccatgaa tacgtgttgg gtcattaaaa 2100 gtagatactg aaattactaa tggtaagact gacacattac ctcataaatg ttactagcta 2160 gatgttgaaa gttgaccaac aactctcaaa atatgattaa gaaaaggaaa cccgcagaac 2220 agtttgattc caaaatgatt tttttctttg cacatgtctt tcttatttgg acttacattg 2280 aaattttgct ttataggaga aacgggacaa cttgtccatc gtttcactgt accaggtatg 2340 ttaatatttg acaaagaata aaagtcattc cattttaaac tatccat 2387 // ID LN880514; SV 1; linear; genomic DNA; STD; HUM; 2384 BP. XX AC LN880514; XX DT 18-OCT-2016 (Rel. 130, Created) DT 18-OCT-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens partial GYPB-A fusion gene for blood group system MNSs, St(a) DE type E, exons 2-4 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2384 RA Gassner C.; RT ; RL Submitted (28-AUG-2015) to the INSDC. RL Department of Molecular Diagnostics and Research (MOC), Blood Transfusion RL Service Zurich, Swiss Red Cross, Ruetistrasse 19, Zurich-Schlieren, 8952, RL SWITZERLAND. XX RN [2] RA Gassner C., Meyer S., Trost N., Sigurdardottir S., Portmann C.; RT "GYPB, GYPB-A and GYPB-AB variants"; RL Unpublished. XX RN [3] RA Meyer S., Vollmert C., Trost N., Sigurdardottir S., Portmann C., RA Gottschalk J., Ries J., Markovic A., Infanti L., Buser A., RA Amar el Dusouqui S., Rigal E., Castelli D., Weingand B., Maier A., RA Sarraj A., Braisch M.C., Thierbach J., Frey B.M., Gassner C.; RT "MALDI-TOF MS based GYPA and GYPB genotyping of 5800 MNSs phenotyped Swiss RT blood donors and evidence for two new St(a) positive haplotypes prevalent RT in Caucasians"; RL Unpublished. XX DR MD5; 9dd5c890fc775ad7cbd9086b1bc75a8d. XX FH Key Location/Qualifiers FH FT source 1..2384 FT /organism="Homo sapiens" FT /chromosome="4" FT /map="4q28-q31" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /tissue_type="blood" FT /db_xref="taxon:9606" FT CDS join(<460..558,2294..>2332) FT /codon_start=3 FT /transl_table=1 FT /gene="GYPB-A fusion gene" FT /allele="GYP.401(B-A), type E" FT /product="blood group system MNSs, St(a) type E" FT /db_xref="GOA:Q7KZ29" FT /db_xref="InterPro:IPR001195" FT /db_xref="UniProtKB/TrEMBL:Q7KZ29" FT /protein_id="CUI25647.1" FT /translation="IVSISALSTTEVAMHTSTSSSVTKSYISSQTNGERVQLAHHFSEP FT " FT exon 460..558 FT /gene="GYPB-A fusion gene" FT /allele="GYP.401(B-A), type E" FT /number=2 FT intron 559..2293 FT /gene="GYPB-A fusion gene" FT /allele="GYP.401(B-A), type E" FT /number=2 FT exon 2294..2332 FT /gene="GYPB-A fusion gene" FT /allele="GYP.401(B-A), type E" FT /number=3 XX SQ Sequence 2384 BP; 775 A; 470 C; 437 G; 702 T; 0 other; ttccaaaatg caacttcaag ttaccccttt ataagcataa taacaataat acccaacata 60 tatgtaatgc tctttatgtg tcaagtacta tactaacaca tacacatcac atacacacac 120 ataccacata cacacacata tttaaactaa ttcgttctca caatgacatt ttgaggcaag 180 tattactatt gtacagatga gaaaaccaag gcacacttta tctgtaaacc tctgctgtac 240 aaaaattctg gaggggcttc tggcccctta attttaaaat aaggccaata atacaatact 300 taccacgcag caattctcta aagattatgt aagatatata ctaaagcgct tagctcaggg 360 actggaggga tgtgagagga atttgtcttt tgtgatatgc tttatggtct gctcagtcac 420 ctcgttctta atccctttct caacttctat tttatacaga aattgtgagc atatcagcat 480 taagtaccac tgaggtggca atgcacactt caacctcttc ttcagtcaca aagagttaca 540 tctcatcaca gacaaatggt ttgttttcat ttttattttt aaattgtggc tccgaaatga 600 tttttgtgat gcaaccctat tttaggggac ctgtcactgc agagaaactg acaaacactg 660 agaaatgcga gctaagtaga cacagcctac taagtagaca caattcttac tacagaggaa 720 ttctagcctc tgaaatatct cacagaaata atactgtgag ttaaagaaat taaaacaatg 780 tggcaaagca cagaaatgat acatgtgacc atgaaatagt gggccagata aaggggacct 840 aatagtgcgg tggtgcggag ggtctgtggg caaaatgagt tcagctcaga cctgggctca 900 gctctatccc agctgctgac ccagggtgag ttgccctgca gggtttctat cccattaatt 960 ttaaaatggg gccaataaca cagtacttat ctcacagcat ttctctaaag gctaaataag 1020 aagaagtgtc taaaagttat tagctcagag cctcacacat tctcagtgac tgataaacaa 1080 taagcaaagc tgggtgctga gataagagta atctggtggc agtctctctt gttagttttc 1140 aggggagaag aagaaattct ggagctgctg ctgggaggga tgtgggagaa tttgtctttc 1200 atgatacgct gtatgtccac gcagtcacct cattcttgtt ccctttctca acttctctta 1260 tatgcagata agcacaaacg ggacacatat ccagctcata ctgctaatga agtttcagaa 1320 atttctgtta caactgtttc ccctccagaa aagaaaaacg ttatgttctt agttttaaat 1380 agtttctctg gagtcattgt tgtgattgaa ctctatttac acgagctgta actcatgaca 1440 gttctcaagc tttcgtgaca gaaaacccat ctcttttact ccaaagccca tatagcaccc 1500 acaactatta actgtgacca agaaagagaa ggcaagcccc aattaacctt tgtacgtaaa 1560 gcctaaagaa tgaaaaaata tacctgaatc ctcaatcatc aaacagcata gtatatacta 1620 agtaatttgt aataattaaa ctctagaaaa ttgtgtggct tcggtagtaa gagagcttca 1680 tgacgtaaaa tggcaagtgg agacagagac aaaagtagga tgtggactga gagggaaggt 1740 tagcacaggt ggaacagtaa ggcaaccata ctatcaattg ctactgacat agaatccaga 1800 gagactattg gcaaaagctc aaatgagaca cagtaacagt ttagattcag acagtggctg 1860 tggcataaat cagaaaattg atagccgcat gatccctctt tgcatgggac tggcatctgt 1920 gtggagtaat ggttccatat gcctcctttc ttctccttat ttttaaattt tttaaaaatg 1980 cattgcttct tgtggaagtc aataagtgat tcttccaata ctttctcatt ccttccccct 2040 cagttatgag acaatttgct tatttctcat ccatgaatac ttgttgggtc attaaaagta 2100 gatactgaaa ttactaatgg tacgactgac ataatacctc ataaatgtta ctagctagat 2160 gttgaaagtt gaccaacaac tctcaaaata tgattaagaa aaggaaaccc acagaacagt 2220 ttgattccaa aatgattttt ttctttgcac atgccttact tatttggact tacattgaaa 2280 ttttgcttta taggagaaag ggtacaactt gcccatcatt tctctgaacc aggtatgtta 2340 atatttgaca aagaataaaa gtcattccat tttaaactat ccat 2384 // ID LN880515; SV 1; linear; genomic DNA; STD; HUM; 2384 BP. XX AC LN880515; XX DT 18-OCT-2016 (Rel. 130, Created) DT 18-OCT-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens GYPB-A fusion gene for blood group system MNSs, St(a) type F, DE exons 2-4 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2384 RA Gassner C.; RT ; RL Submitted (28-AUG-2015) to the INSDC. RL Department of Molecular Diagnostics and Research (MOC), Blood Transfusion RL Service Zurich, Swiss Red Cross, Ruetistrasse 19, Zurich-Schlieren, 8952, RL SWITZERLAND. XX RN [2] RA Gassner C., Meyer S., Trost N., Sigurdardottir S., Portmann C.; RT "GYPB, GYPB-A and GYPB-AB variants"; RL Unpublished. XX RN [3] RA Meyer S., Vollmert C., Trost N., Sigurdardottir S., Portmann C., RA Gottschalk J., Ries J., Markovic A., Infanti L., Buser A., RA Amar el Dusouqui S., Rigal E., Castelli D., Weingand B., Maier A., RA Sarraj A., Braisch M.C., Thierbach J., Frey B.M., Gassner C.; RT "MALDI-TOF MS based GYPA and GYPB genotyping of 5800 MNSs phenotyped Swiss RT blood donors and evidence for two new St(a) positive haplotypes prevalent RT in Caucasians"; RL Unpublished. XX DR MD5; 434ce962fda71df17deb9162663423b6. XX FH Key Location/Qualifiers FH FT source 1..2384 FT /organism="Homo sapiens" FT /chromosome="4" FT /map="4q28-q31" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /tissue_type="blood" FT /db_xref="taxon:9606" FT CDS join(<460..558,2294..>2332) FT /codon_start=3 FT /transl_table=1 FT /gene="GYPB-A fusion gene" FT /allele="GYP.401(B-A), type F" FT /product="blood group system MNSs, St(a) type F" FT /db_xref="GOA:Q7KZ29" FT /db_xref="InterPro:IPR001195" FT /db_xref="UniProtKB/TrEMBL:Q7KZ29" FT /protein_id="CUI25648.1" FT /translation="IVSISALSTTEVAMHTSTSSSVTKSYISSQTNGERVQLAHHFSEP FT " FT exon 460..558 FT /gene="GYPB-A fusion gene" FT /allele="GYP.401(B-A), type F" FT /number=2 FT intron 559..2293 FT /gene="GYPB-A fusion gene" FT /allele="GYP.401(B-A), type F" FT /number=2 FT exon 2294..2332 FT /gene="GYPB-A fusion gene" FT /allele="GYP.401(B-A), type F" FT /number=3 XX SQ Sequence 2384 BP; 780 A; 471 C; 431 G; 702 T; 0 other; ttccaaaatg caacttcaag ttaccccttt ataagcataa taacaataat acccaacata 60 tatgtaatgc tctttatgtg tcaagtacta tactaacaca tacacatcac atacacacac 120 ataccacata cacacacata tttaaactaa ttcgttctca caatgacatt ttgaggcaag 180 tattactatt gtacagatga gaaaaccaag gcacacttta tctgtaaacc tctgctgtac 240 aaaaattctg gaggggcttc tggcccctta attttaaaat aaggccaata atacaatact 300 taccacgcag caattctcta aagattatgt aagatatata ctaaagcgct tagctcaggg 360 actggaggga tgtgagagga atttgtcttt tgtgatatgc tttatggtct gctcagtcac 420 ctcgttctta atccctttct caacttctat tttatacaga aattgtgagc atatcagcat 480 taagtaccac tgaggtggca atgcacactt caacctcttc ttcagtcaca aagagttaca 540 tctcatcaca gacaaatggt ttgttttcat ttttattttt aaattgtggc tccgaaatga 600 tttttgtgat gcaaccctat tttaggggac ctgtcactgc agagaaactg acaaacactg 660 agaaatgcga gctaagtaga cacagcctac taagtagaca caattcttac tacagaggaa 720 ttctagcctc tgaaatatct cacagaaata atactgtgag ttaaagaaat taaaacaatg 780 tggcaaagca cagaaatgat acatgtgacc atgaaatagt gggccagata aaggggacct 840 aatagtgcgg tggtgcggag ggtctgtggg caaaatgagt tcagctcaga cctgggctca 900 gctctatccc agctgctgac ccagggtgag ttgccctgca gggtttctat cccattaatt 960 ttaaaatggg gccaataaca cagtacttat ctcacagcat ttctctaaag gctaaataag 1020 aagaagtgtc taaaagttat tagctcagag cctcacacat tctcagtgac tgataaacaa 1080 taagcaaagc tgggtgctga gataagagta atctggtggc agtctctctt gttagttttc 1140 aggggagaag aagaaattct ggagctgctg ctgggaggga tgtgggagaa tttgtctttc 1200 atgatacgct gtatgtccac gcagtcacct cattcttgtt ccctttctca acttctctta 1260 tatgcagata agcacaaacg ggacacatat ccagctcata ctgctaatga agtttcagaa 1320 atttctgtta caactgtttc ccctccagaa aagaaaaacg ttatgttctt agttttaaat 1380 agtttctctg gagtcattgt tgtgattgaa ctctatttac acgagctgta actcatgaca 1440 gttctcaaac tttcgtgaca gaaaacccaa ctcttttact ccaaagccca tatagcaccc 1500 acaactatta actgtgacca agaaagagaa ggcaagcccc aattaacctt tgtacgtaaa 1560 gcctaaagaa tgaaaaaata tacctgaatc ctcaatcatc aaacaacata gcatatacta 1620 agtaatttgt aataattaaa ctctagaaaa ttgtgtggct tcggtagtaa gagagcttca 1680 tgacataaaa tggcaagtgg agacagagac aaaagtagga tgtggactga gagggaaggt 1740 tagcacaggt ggaacagtaa ggcaaccata ctatcaattg ctactgacat agaatccaga 1800 gagactattg gcaaaagctc aaatgagaca cagtaacagt ttagattcat acagtggcta 1860 tggcataaat cagaaaattg atagccgcat gatccctctt tgcatgggac tggcatctgt 1920 gtggagtaat ggttccatat gcctcctttc ttctccttat ttttaaattt tttaaaaata 1980 cattgcttct tgtggaagtc aataagtgat tcttccaata ctttctcatt ccttccccct 2040 cagttatgag acaatttgct tatttctcat ccatgaatac ttgttgggtc attaaaagta 2100 gatactgaaa ttactaatgg tacgactgac atattacctc ataaatgtta ctagctagat 2160 gttgaaagtt gaccaacaac tctcaaaata tgattaagaa aaggaaaccc acagaacagt 2220 ttgattccaa aatgattttt ttctttgcac atgccttact tatttggact tacattgaaa 2280 ttttgcttta taggagaaag ggtacaactt gcccatcatt tctctgaacc aggtatgtta 2340 atatttgaca aagaataaaa gtcattccat tttaaactat ccat 2384 // ID LN880516; SV 1; linear; genomic DNA; STD; HUM; 5921 BP. XX AC LN880516; XX DT 18-OCT-2016 (Rel. 130, Created) DT 18-OCT-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens GYPB gene for glycophorin B, blood group system Ss, S blood DE group system Ss, exons 1-5 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5921 RA Gassner C.; RT ; RL Submitted (31-AUG-2015) to the INSDC. RL Department of Molecular Diagnostics and Research (MOC), Blood Transfusion RL Service Zurich, Swiss Red Cross, Ruetistrasse 19, Zurich-Schlieren, 8952, RL SWITZERLAND. XX RN [2] RA Gassner C., Meyer S., Trost N., Sigurdardottir S., Portmann C.; RT "GYPB, GYPB-A and GYPB-AB variants"; RL Unpublished. XX RN [3] RA Meyer S., Vollmert C., Trost N., Sigurdardottir S., Portmann C., RA Gottschalk J., Ries J., Markovic A., Infanti L., Buser A., RA Amar el Dusouqui S., Rigal E., Castelli D., Weingand B., Maier A., RA Sarraj A., Braisch M.C., Thierbach J., Frey B.M., Gassner C.; RT "MALDI-TOF MS based GYPA and GYPB genotyping of 5800 MNSs phenotyped Swiss RT blood donors and evidence for two new St(a) positive haplotypes prevalent RT in Caucasians"; RL Unpublished. XX DR MD5; b2c1d5c385239f14db097976e4f07e79. XX FH Key Location/Qualifiers FH FT source 1..5921 FT /organism="Homo sapiens" FT /chromosome="4" FT /map="4q28-q31" FT /isolate="Zurich-T-00327 of phenotype MMSS" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /tissue_type="blood" FT /db_xref="taxon:9606" FT exon 39..131 FT /gene="GYPB" FT /allele="GYPB*03" FT /number=1 FT CDS join(95..131,798..896,2632..2670,4448..4542,5778..5783) FT /codon_start=1 FT /transl_table=1 FT /gene="GYPB" FT /allele="GYPB*03" FT /product="glycophorin B, blood group system Ss, S" FT /db_xref="GOA:A0A1E1JP59" FT /db_xref="InterPro:IPR001195" FT /db_xref="InterPro:IPR018938" FT /db_xref="UniProtKB/TrEMBL:A0A1E1JP59" FT /protein_id="CUI25649.1" FT /translation="MYGKIIFVLLLSEIVSISALSTTEVAMHTSTSSSVTKSYISSQTN FT GEMGQLVHRFTVPAPVVIILIILCVMAGIIGTILLISYSIRRLIKA" FT gap 331..430 FT /estimated_length=100 FT exon 798..896 FT /gene="GYPB" FT /allele="GYPB*03" FT /number=2 FT intron 897..2631 FT /gene="GYPB" FT /allele="GYPB*03" FT /number=2 FT exon 2632..2670 FT /gene="GYPB" FT /allele="GYPB*03" FT /number=3 FT intron 2671..4447 FT /gene="GYPB" FT /allele="GYPB*03" FT /number=3 FT exon 4448..4542 FT /gene="GYPB" FT /allele="GYPB*03" FT /number=4 FT intron 4543..5777 FT /gene="GYPB" FT /allele="GYPB*03" FT /number=4 FT exon 5778..5783 FT /gene="GYPB" FT /allele="GYPB*03" FT /number=5 XX SQ Sequence 5921 BP; 1767 A; 1134 C; 1103 G; 1817 T; 100 other; taacagctag taggctaagg ccagacactg acacttgcag ttgtctttgg tagttttttt 60 gcactaactt caggaaccag ctcatgatct caggatgtat ggaaaaataa tctttgtatt 120 actattgtca ggtaagtgat tttatttcat cttggttctg ttatattggg tatgagatca 180 tagaataaaa tatgaactac cctatttcag ttctatctta tttaaatcaa taaatgagta 240 gtatttcctc ttccagtctg gtggatggat tttactggaa ctcagctacc aatgtggggg 300 aaatgacgca agggagccca gtatttatga nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 420 nnnnnnnnnn ctaacacata cacatcacat acacacacat accacataca cacacatatt 480 taaactaatt cgttctcaca atgacatttt gaggcaagta ttactattgt acagatgaga 540 aaaccaaggc acactttatc tgtaaacctc tgctgtacaa aaattctgga ggggcttctg 600 gccccttaat tttaaaataa ggccaataat acaatactta ccacgcagca attctctaaa 660 gattatgtaa gatatatact aaagcgctta gctcagggac tggagggatg tgagaggaat 720 ttgtcttttg tgatatgctt tatggtctgc tcagtcacct cgttcttaat ccctttctca 780 acttctattt tatacagaaa ttgtgagcat atcagcatta agtaccactg aggtggcaat 840 gcacacttca acctcttctt cagtcacaaa gagttacatc tcatcacaga caaatggttt 900 gttttcattt ttatttttaa attgtggctc cgaaatgatt tttgtgatgc aaccctattt 960 taggggacct gtcactgcag agaaactgac aaacactgag aaatgcgagc taagtagaca 1020 cagcctacta agtagacaca attcttacta cagaggaatt ctagcctctg aaatatctca 1080 cagaaataat actgtgagtt aaagaaatta aaacaatgtg gcaaagcaca gaaatgatac 1140 atgtgaccat gaaatagtgg gccagataaa ggggacctaa tagtgcggtg gtgcggaggg 1200 tctgtgggca aaatgagttc agctcagacc tgggctcagc tctatcccag ctgctgaccc 1260 agggtgagtt gccctgcagg gtttctatcc cattaatttt aaaatggggc caataacaca 1320 gtacttatct cacagcattt ctctaaaggc taaataagaa gaagtgtcta aaagttatta 1380 gctcagagcc tcacacattc tcagtgactg ataaacaata agcaaagctg ggtgctgaga 1440 taagagtaat ctggtggcag tctctcttgt tagttttcag gggagaagaa gaaattctgg 1500 agctgctgct gggagggatg tgggagaatt tgtctttcat gatacgctgt atgtccacgc 1560 agtcacctca ttcttgttcc ctttctcaac ttctcttata tgcagataag cacaaacggg 1620 acacatatcc agctcatact gctaatgaag tttcagaaat ttctgttaca actgtttccc 1680 ctccagaaaa gaaaaacgtt atgttcttag ttttaaatag tttctctgga gtcattgttg 1740 tgattgaact ctatttacac gagctgtaac tcatgacagt tctcaaactt tcgtgacaga 1800 aaacccaact cttttactcc aaagcccata tagcacccac aactattaac tgtgaccaag 1860 aaagagaagg caagccccaa ttaacctttg tacgtaaagc ctaaagaatg aaaaaatata 1920 cctgaatcct caatcatcaa acaacatagc atatactaag taatttgtaa taattaaact 1980 ctagaaaatt gtgtggcttt ggtataagag agcttcatga cataaaatgg caagtggaga 2040 cagagacaaa agtaggatgt ggactgagag ggaaggttag cacaggtgga acagtaaggc 2100 aaccatacta tcaattgcta ctgacataga atccagagag actattggca aaagctcaaa 2160 tgagacacag taacagttta gattcataca gtggctatgg cataaatcag aaaattgata 2220 gccgcatgac ccttctttgc atgggactgg catctctgtg gagtaatggc tccatatgcc 2280 tcctttcttc tcattatttt ttacatgttt taaaaatgca ttgcttcttg tggaagtcaa 2340 taagtgatgc ttccaatact ttctcattcc tttcccctca gttatgagac aatttgctta 2400 tttctcatcc atgaatacgt gttgggtcat taaaagtaga tactgaaatt actaatggta 2460 agactgacac attacctcat aaatgttact agctagatgt tgaaagttga ccaacaactc 2520 tcaaaatatg attaagaaaa ggaaacccgc agaacagttt gattccaaaa tgattttttt 2580 ctttgcacat gtcttactta tttggactta cattgaaatt ttgctttata ggagaaatgg 2640 gacaacttgt ccatcgtttc actgtaccag gtatgttaat atttgacaaa gaataaaagt 2700 cattccattt taaactatcc attgcttgtt tcaaatgcct aagaaaatgt gtcaatctta 2760 aaacagaaga gcatatgttg ttaactttat tcacacgaaa ttgtaaagac aaagaaaata 2820 ttctcttttt aaaattaaaa taggcatttc ttatttttaa aaacattttg ggggccaggg 2880 gccgtggctc atgcctataa tccctataat tttgggaggc caagcctggc taatcacttg 2940 agcccaggaa tttgagaaca gcctgggcaa tatggcaaaa tctatctcta caaaaaatac 3000 aaaaattagc tgggatgggg catgcacctg tagtctcaac tgcttgggag gctggctgag 3060 gtgggaggat cggattgatt gcctgagcct gggagtttga ggctgcagtg agctatgact 3120 gtgccactgt actctagcct tggtaagacc ctgtctcaaa aacaaataca taagtaaata 3180 aaaataaata aaaacatttt ggaaatagaa atacataatt tggtaatagt ttttctctta 3240 agttagatgt tttacctttc taaccaaccc tgagtacttg aaagaagcct cataagagct 3300 tataaaacaa gtgaagttcc ctctgccctc atgtaaaaag caaggcattt aaaatcatct 3360 aattaactgg tactgtattt caagggtaaa tctcagcctt gattcatttt tggcccaatg 3420 caaccactta gggaccatct tgacaacctc tgctgaaggg acatcccttc ccctcacttg 3480 agtatcactg tgtgtgttca tttgctattc tgcattctaa ccctcccttc acacttggct 3540 gtgtccacgg ctcacagggt aaaaagcaca tcatagaact tcatcactat cgcatacatt 3600 caagctaagt ggtcaagaag gctgggcaac accagcaaga ggaaatgcta cttttacttt 3660 ttgtcaataa tttaaatatt aattaggcaa ataaatgagc cattttacct gtatgtctag 3720 ccttccattc tatttacttc atctggaagt actacaaata tgctataaat atggaaatat 3780 ctcttactta attgatttca attgtttcat tcccaacata taaatgactt aacaagcatt 3840 gttagtgact atattggaga ctatgcataa gaatactgtg gaaggaataa agcttagaat 3900 atagatgacc tgcattatag ttataattct acttttaact agttgtctga ccaaggctaa 3960 gttaacctta ttcagcttct tttcttcatt tgtaaactgt ttataccagt ttctttccaa 4020 aattatgatt ctatgatctg ttcaatgctc ttttatatgt taagacattg ttttctctca 4080 taacttccaa actatgggag aatttgtggg tttttttccc catatctgag gagaacgtcc 4140 actgagttct tatctacagt tacactagtg aagaacgctg ggtctggaat cagaagcctc 4200 aggtcttagt tctgtcatca actattttgc gaccttggac aaaagacttg atcactcaca 4260 gtcccagttt cccacaaggt tactgtaaag cacacaattt aaaaaaagac aaaatacaca 4320 taatagtatg ttaattgtac tttgtattaa aaggcaaggt gatgttatgc tgatgttatc 4380 tgtcttattt ttctattgct atgtggtcat ttatttcaga ctttcataat tttgctgctc 4440 tctttagctc ctgtagtgat aatactcatt attttgtgtg tgatggctgg tattattgga 4500 acgatcctct taatttctta cagtattcgc cgactgataa aggtgagaat tcagttttta 4560 attttgctct aaataccagt gtgaacagct ctaggagggt ttattcctct gagttcagtt 4620 aaactcagaa gagaaacaga actgcataaa attccatctt tttcaactgg acacatagaa 4680 gtcactgtgt ttctctagca gaattttttt tttgcatttg cccaattaaa gggaacctct 4740 aaatataagt ctgtccccca ttttcccaat gaaagatctc cctaagtttt tgtctaactt 4800 gctttcacat attttgatgg atattgagga aatattaaga ttcttcttat agtatttaac 4860 ctattagtgt aaaaaatatt taaaataata tatttacata tgtttaaaac tttggaggag 4920 gccaaggcag gaggattgct tgagctcagg agtttgagac cagcctgagc aaaaaggtga 4980 aacctagtct atacaaaaaa tatgaaaatt agaaaggctt ggtggtgcac atgtgtagta 5040 tcagctattc agggggctga agtgggagga ttgcttgagc ctcggaaatc aaggctgcag 5100 tgagctgtga tcatgctact gcactccagc ctgggcaaca gagtgagacc atgtctcaat 5160 aaatatataa ataaataaat aaaaataaaa taaaactttt gcctttctta attctcacat 5220 gttctgaaac agattttaca aatttccacc catgaattct taacatcagt gatttttttt 5280 gaatcattaa agttttttaa attttttttt gagacagagt ttccctctgt cacccaggct 5340 cgagtgcaaa gtggcgcaat ctctgctcac tgcagcctct gcctccctgg ttcaagtgat 5400 tctcgtgctt cagcctccac agtaattggg actacaggtg cgggctacca tgcctgacta 5460 atttttgtat ttttttaata gcagagatgg ggtttcgctg tgttggccag gctggtttca 5520 aactcctgac ctcaagtgat ccacctgcct tggcctccaa agtgctggga ttacaggtgt 5580 gagccactgc gcccggccct aattagggtt tttataaaac caaaagaact tggcaacacc 5640 cctaggtacc ctttagaagc ctccaattgg ctacagcctg tgaaggattg gcctgtgacc 5700 aatcagaggc tgaagtggag gcttagctca tggtcaagca gaggctgaag tggaaacttc 5760 ttgtcttttt atcacaggca tgaggatgtg gcctgcatgc tgcctgatct tgcctagaac 5820 cggctgcacc tgctgttctc ttgtttatgc aaactggctg cacctgctat tcctttgctt 5880 atgcccctac ccctggctat cctaattgcc tgttctcctg c 5921 // ID LN880517; SV 1; linear; genomic DNA; STD; HUM; 5887 BP. XX AC LN880517; XX DT 18-OCT-2016 (Rel. 130, Created) DT 18-OCT-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens partial GYPB gene for glycophorin B, blood group system Ss, DE exons 1-6 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5887 RA Gassner C.; RT ; RL Submitted (31-AUG-2015) to the INSDC. RL Department of Molecular Diagnostics and Research (MOC), Blood Transfusion RL Service Zurich, Swiss Red Cross, Ruetistrasse 19, Zurich-Schlieren, 8952, RL SWITZERLAND. XX RN [2] RA Gassner C., Meyer S., Trost N., Sigurdardottir S., Portmann C.; RT "GYPB, GYPB-A and GYPB-AB variants"; RL Unpublished. XX RN [3] RA Meyer S., Vollmert C., Trost N., Sigurdardottir S., Portmann C., RA Gottschalk J., Ries J., Markovic A., Infanti L., Buser A., RA Amar el Dusouqui S., Rigal E., Castelli D., Weingand B., Maier A., RA Sarraj A., Braisch M.C., Thierbach J., Frey B.M., Gassner C.; RT "MALDI-TOF MS based GYPA and GYPB genotyping of 5800 MNSs phenotyped Swiss RT blood donors and evidence for two new St(a) positive haplotypes prevalent RT in Caucasians"; RL Unpublished. XX DR MD5; c2e6fc6bff416884670c8ca5e6ec128b. XX FH Key Location/Qualifiers FH FT source 1..5887 FT /organism="Homo sapiens" FT /chromosome="4" FT /map="4q28-q31" FT /isolate="Zurich-MO-00021" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /tissue_type="blood" FT /note="variant GYPB*03(218G>A,G73D)null" FT /db_xref="taxon:9606" FT exon 39..131 FT /gene="GYPB" FT /allele="GYPB*03(218G>A,G73D)null" FT /number=1 FT CDS join(95..131,798..896,2632..2670,4448..4542,5778..5783) FT /codon_start=1 FT /transl_table=1 FT /gene="GYPB" FT /allele="GYPB*03(218G>A,G73D)null" FT /product="glycophorin B, blood group system Ss, S" FT /db_xref="GOA:A0A1E1JSF8" FT /db_xref="InterPro:IPR001195" FT /db_xref="UniProtKB/TrEMBL:A0A1E1JSF8" FT /protein_id="CUI25650.1" FT /translation="MYGKIIFVLLLSEIVSISALSTTEVAMHTSTSSSVTKSYISSQTN FT GEMGQLVHRFTVPAPVVIILIILCVMADIIGTILLISYSIRRLIKA" FT gap 331..430 FT /estimated_length=100 FT exon 798..896 FT /gene="GYPB" FT /allele="GYPB*03(218G>A,G73D)null" FT /number=2 FT intron 897..2631 FT /gene="GYPB" FT /allele="GYPB*03(218G>A,G73D)null" FT /number=2 FT exon 2632..2670 FT /gene="GYPB" FT /allele="GYPB*03(218G>A,G73D)null" FT /number=3 FT intron 2671..4447 FT /gene="GYPB" FT /allele="GYPB*03(218G>A,G73D)null" FT /number=3 FT exon 4448..4542 FT /gene="GYPB" FT /allele="GYPB*03(218G>A,G73D)null" FT /number=4 FT intron 4543..5777 FT /gene="GYPB" FT /allele="GYPB*03(218G>A,G73D)null" FT /number=4 FT exon 5778..5783 FT /gene="GYPB" FT /allele="GYPB*03(218G>A,G73D)null" FT /number=5 XX SQ Sequence 5887 BP; 1764 A; 1121 C; 1096 G; 1806 T; 100 other; taacagctag taggctaagg ccagacactg acacttgcag ttgtctttgg tagttttttt 60 gcactaactt caggaaccag ctcatgatct caggatgtat ggaaaaataa tctttgtatt 120 actattgtca ggtaagtgat tttatttcat cttggttctg ttatattggg tatgagatca 180 tagaataaaa tatgaactac cctatttcag ttctatctta tttaaatcaa taaatgagta 240 gtatttcctc ttccagtctg gtggatggat tttactggaa ctcagctacc aatgtggggg 300 aaatgacgca agggagccca gtatttatga nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 420 nnnnnnnnnn ctaacacata cacatcacat acacacacat accacataca cacacatatt 480 taaactaatt cgttctcaca atgacatttt gaggcaagta ttactattgt acagatgaga 540 aaaccaaggc acactttatc tgtaaacctc tgctgtacaa aaattctgga ggggcttctg 600 gccccttaat tttaaaataa ggccaataat acaatactta ccacgcagca attctctaaa 660 gattatgtaa gatatatact aaagtgctta gctcagggac tggagggatg tgagaggaat 720 ttgtcttttg tgatatgctt tatggtctgc tcagtcacct cgttcttaat ccctttctca 780 acttctattt tatacagaaa ttgtgagcat atcagcatta agtaccactg aggtggcaat 840 gcacacttca acctcttctt cagtcacaaa gagttacatc tcatcacaga caaatggttt 900 gttttcattt ttatttttaa attgtggctc cgaaatgatt tttgtgatgc aaccctattt 960 taggggacct gtcactgcag agaaactgac aaacactgag aaatgcgagc taagtagaca 1020 cagcctacta agtagacaca attcttacta cagaggaatt ctagcctctg aaatatctca 1080 cagaaataat actgtgagtt aaagaaatta aaacaatgtg gcaaagcaca gaaatgatac 1140 atgtgaccat gaaatagtgg gccagataaa ggggacctaa tagtgcggtg gtgcggaggg 1200 tctgtgggca aaatgagttc agctcagacc tgggctcagc tctatcccag ctgctgaccc 1260 agggtgagtt gccctgcagg gtttctatcc cattaatttt aaaatggggc caataacaca 1320 gtacttatct cacagcattt ctctaaaggc taaataagaa gaagtgtcta aaagttatta 1380 gctcagagcc tcacacattc tcagtgactg ataaacaata agcaaagctg ggtgctgaga 1440 taagagtaat ctggtggcag tctctcttgt tagttttcag gggagaagaa gaaattctgg 1500 agctgctgct gggacggatg tgggagaatt tgtctttcat gatacgctgt atgtccacgc 1560 agtcacctca ttcttgttcc ctttctcaac ttctcttata tgcagataag cacaaacggg 1620 acacatatcc agctcatact gctaatgaag tttcagaaat ttctgttaca actgtttccc 1680 ctccagaaaa gaaaaacgtt atgttcttag ttttaaatag tttctctgga gtcattgttg 1740 tgattgaact ctatttacac gagctgtaac tcatgacagt tctcaaactt tcgtgacaga 1800 aaacccaact cttttactcc aaagcccata tagcacccac aactattaac tgtgaccaag 1860 aaagagaagg caagccccaa ttaacctttg tacgtaaagc ctaaagaatg aaaaaatata 1920 cctgaatcct caatcatcaa acaacatagc atatactaag taatttgtaa taattaaact 1980 ctagaaaatt gtgtggcttt ggtataagag agcttcatga cataaaatgg caagtggaga 2040 cagagacaaa agtaggatgt ggactgagag ggaaggttag cacaggtgga acagtaaggc 2100 aaccatacta tcaattgcta ctgacataga atccagagag actattggca aaagctcaaa 2160 tgagacacag taacagttta gattcataca gtggctatgg cataaatcag aaaattgata 2220 gccgcatgac ccttctttgc atgggactgg catctctgtg gagtaatggc tccatatgcc 2280 tcctttcttc tcattatttt ttacatgttt taaaaatgca ttgcttcttg tggaagtcaa 2340 taagtgatgc ttccaatact ttctcattcc tttcccctca gttatgagac aatttgctta 2400 tttctcatcc atgaatacgt gttgggtcat taaaagtaga tactgaaatt actaatggta 2460 agactgacac attacctcat aaatgttact agctagatgt tgaaagttga ccaacaactc 2520 tcaaaatatg attaagaaaa ggaaacccgc agaacagttt gattccaaaa tgattttttt 2580 ctttgcacat gtcttactta tttggactta cattgaaatt ttgctttata ggagaaatgg 2640 gacaacttgt ccatcgtttc actgtaccag gtatgttaat atttgacaaa gaataaaagt 2700 cattccattt taaactatcc attgcttgtt tcaaatgcct aagaaaatgt gtcaatctta 2760 aaacagaaga gcatatgttg ttaactttat tcacacgaaa ttgtaaagac aaagaaaata 2820 ttctcttttt aaaattaaaa taggcatttc ttatttttaa aaacattttg ggggccaggg 2880 gccgtggctc atgcctataa tccctataat tttgggaggc caagcctggc taatcacttg 2940 agcccaggaa tttgagaaca gcctgggcaa tatggcaaaa tctatctcta caaaaaatac 3000 aaaaattagc tgggatgggg catgcacctg tagtctcaac tgcttgggag gctggctgag 3060 gtgggaggat cggattgatt gcctgagcct gggagtttga ggctgcagtg agctatgact 3120 gtgccactgt actctagcct tggtaagacc ctgtctcaaa aacaaataca taagtaaata 3180 aaaataaata aaaacatttt ggaaatagaa atacataatt tggtaatagt ttttctctta 3240 agttagatgt tttacctttc taaccaaccc tgagtacttg aaagaagcct cataagagct 3300 tataaaacaa gtgaagttcc ctctgccctc atgtaaaaag caaggcattt aaaatcatct 3360 aattaactgg tactgtattt caagggtaaa tctcagcctt gattcatttt tggcccaatg 3420 caaccactta gggaccatct tgacaacctc tgctgaaggg acatcccttc ccctcacttg 3480 agtatcactg tgtgtgttca tttgctattc tgcattctaa ccctcccttc acacttggct 3540 gtgtccacgg ctcacagggt aaaaagcaca tcatagaact tcatcactat cgcatacatt 3600 caagctaagt ggtcaagaag gctgggcaac accagcaaga ggaaatgcta cttttacttt 3660 ttgtcaataa tttaaatatt aattaggcaa ataaatgagc cattttacct gtatgtctag 3720 ccttccattc tatttacttc atctggaagt actacaaata tgctataaat atggaaatat 3780 ctcttactta attgatttca attgtttcat tcccaacata taaatgactt aacaagcatt 3840 gttagtgact atattggaga ctatgcataa gaatactgtg gaaggaataa agcttagaat 3900 atagatgacc tgcattatag ttataattct acttttaact agttgtctga ccaaggctaa 3960 gttaacctta ttcagcttct tttcttcatt tgtaaactgt ttataccagt ttctttccaa 4020 aattatgatt ctatgatctg ttcaatgctc ttttatatgt taagacattg ttttctctca 4080 taacttccaa actatgggag aatttgtggg tttttttccc catatctgag gagaacgtcc 4140 actgagttct tatctacagt tacactagtg aagaacgctg ggtctggaat cagaagcctc 4200 aggtcttagt tctgtcatca actattttgc gaccttggac aaaagacttg atcactcaca 4260 gtcccagttt cccacaaggt tactgtaaag cacacaattt aaaaaaagac aaaatacaca 4320 taatagtatg ttaattgtac tttgtattaa aaggcaaggt gatgttatgc tgatgttatc 4380 tgtcttattt ttctattgct atgtggtcat ttatttcaga ctttcataat tttgctgctc 4440 tctttagctc ctgtagtgat aatactcatt attttgtgtg tgatggctga tattattgga 4500 acgatcctct taatttctta cagtattcgc cgactgataa aggtgagaat tcagttttta 4560 attttgctct aaataccagt gtgaacagct ctaggagggt ttattcctct gagttcagtt 4620 aaactcagaa gagaaacaga actgcataaa attccatctt tttcaactgg acacatagaa 4680 gtcactgtgt ttctctagca gaattttttt tttgcatttg cccaattaaa gggaacctct 4740 aaatataagt ctgtccccca ttttcccaat gaaagatctc cctaagtttt tgtctaactt 4800 gctttcacat attttgatgg atattgagga aatattaaga ttcttcttat agtatttaac 4860 ctattagtgt aaaaaatatt taaaataata tatttacata tgtttaaaac tttggaggag 4920 gccaaggcag gaggattgct tgagctcagg agtttgagac cagcctgagc aaaaaggtga 4980 aacctagtct atacaaaaaa tatgaaaatt agaaaggctt ggtggtgcac atgtgtagta 5040 tcagctattc agggggctga agtgggagga ttgcttgagc ctcggaaatc aaggctgcag 5100 tgagctgtga tcatgctact gcactccagc ctgggcaaca gagtgagacc atgtctcaat 5160 aaatatataa ataaataaat aaaaataaaa taaaactttt gcctttctta attctcacat 5220 gttctgaaac agattttaca aatttccacc catgaattct taacatcagt gatttttttt 5280 gaatcattaa agttttttaa attttttttt gagacagagt ttccctctgt cacccaggct 5340 cgagtgcaaa gtggcgcaat ctctgctcac tgcagcctct gcctccctgg ttcaagtgat 5400 tctcgtgctt cagcctccac agtaattggg actacaggtg cgggctacca tgcctgacta 5460 atttttgtat ttttttaata gcagagatgg ggtttcgctg tgttggccag gctggtttca 5520 aactcctgac ctcaagtgat ccacctgcct tggcctccaa agtgctggga ttacaggtgt 5580 gagccactgc gcccggccct aattagggtt tttataaaac caaaagaact tggcaacacc 5640 cctaggtacc ctttagaagc ctccaattgg ctacagcctg tgaaggattg gcctgtgacc 5700 aatcagaggc tgaagtggag gcttagctca tggtcaagca gaggctgaag tggaaacttc 5760 ttgtcttttt atcacaggca tgaggatgtg gcctgcatgc tgcctgatct tgcctagaac 5820 cggctgcacc tgctgttctc ttgtttatgc aaactggctg cacctgctat tcctttgctt 5880 atgcccc 5887 // ID LN880518; SV 1; linear; genomic DNA; STD; HUM; 5886 BP. XX AC LN880518; XX DT 18-OCT-2016 (Rel. 130, Created) DT 18-OCT-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens partial GYPB gene for glycophorin B, blood group system Ss, S, DE Mit+, exons 1-5 tem XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5886 RA Gassner C.; RT ; RL Submitted (31-AUG-2015) to the INSDC. RL Department of Molecular Diagnostics and Research (MOC), Blood Transfusion RL Service Zurich, Swiss Red Cross, Ruetistrasse 19, Zurich-Schlieren, 8952, RL SWITZERLAND. XX RN [2] RA Gassner C., Meyer S., Trost N., Sigurdardottir S., Portmann C.; RT "GYPB, GYPB-A and GYPB-AB variants"; RL Unpublished. XX RN [3] RA Meyer S., Vollmert C., Trost N., Sigurdardottir S., Portmann C., RA Gottschalk J., Ries J., Markovic A., Infanti L., Buser A., RA Amar el Dusouqui S., Rigal E., Castelli D., Weingand B., Maier A., RA Sarraj A., Braisch M.C., Thierbach J., Frey B.M., Gassner C.; RT "MALDI-TOF MS based GYPA and GYPB genotyping of 5800 MNSs phenotyped Swiss RT blood donors and evidence for two new St(a) positive haplotypes prevalent RT in Caucasians"; RL Unpublished. XX DR MD5; e726dfcacc753f275cf7554bedd2c13c. XX FH Key Location/Qualifiers FH FT source 1..5886 FT /organism="Homo sapiens" FT /chromosome="4" FT /map="4q28-q31" FT /isolate="Zurich-MO-00014" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /tissue_type="blood" FT /db_xref="taxon:9606" FT exon 39..131 FT /gene="GYPB" FT /allele="GYPB*24" FT /number=1 FT CDS join(95..131,797..895,2631..2669,4447..4541,5777..5782) FT /codon_start=1 FT /transl_table=1 FT /gene="GYPB" FT /allele="GYPB*24" FT /product="glycophorin B, blood group system Ss, S, Mit+" FT /db_xref="GOA:A0A1E1JP42" FT /db_xref="InterPro:IPR001195" FT /db_xref="InterPro:IPR018938" FT /db_xref="UniProtKB/TrEMBL:A0A1E1JP42" FT /protein_id="CUI25651.1" FT /translation="MYGKIIFVLLLSEIVSISALSTTEVAMHTSTSSSVTKSYISSQTN FT GEMGQLVHHFTVPAPVVIILIILCVMAGIIGTILLISYSIRRLIKA" FT gap 330..429 FT /estimated_length=100 FT exon 797..895 FT /gene="GYPB" FT /allele="GYPB*24" FT /number=2 FT intron 896..2630 FT /gene="GYPB" FT /allele="GYPB*24" FT /number=2 FT exon 2631..2669 FT /gene="GYPB" FT /allele="GYPB*24" FT /number=3 FT intron 2670..4446 FT /gene="GYPB" FT /allele="GYPB*24" FT /number=3 FT exon 4447..4541 FT /gene="GYPB" FT /allele="GYPB*24" FT /number=4 FT intron 4542..5776 FT /gene="GYPB" FT /allele="GYPB*24" FT /number=4 FT exon 5777..5782 FT /gene="GYPB" FT /allele="GYPB*24" FT /number=5 XX SQ Sequence 5886 BP; 1764 A; 1121 C; 1097 G; 1804 T; 100 other; taacagctag taggctaagg ccagacactg acacttgcag ttgtctttgg tagttttttt 60 gcactaactt caggaaccag ctcatgatct caggatgtat ggaaaaataa tctttgtatt 120 actattgtca ggtaagtgat tttatttcat cttggttctg ttatattggg tatgagatca 180 tagaataaaa tatgaactac ctatttcagt tctatcttat ttaaatcaat aaatgagtag 240 tatttcctct tccagtctgg tggatggatt ttactggaac tcagctacca atgtggggga 300 aatgacgcaa gggagcccag tatttatgan nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 420 nnnnnnnnnc taacacatac acatcacata cacacacata ccacatacac acacatattt 480 aaactaattc gttctcacaa tgacattttg aggcaagtat tactattgta cagatgagaa 540 aaccaaggca cactttatct gtaaacctct gctgtacaaa aattctggag gggcttctgg 600 ccccttaatt ttaaaataag gccaataata caatacttac cacgcagcaa ttctctaaag 660 attatgtaag atatatacta aagcgcttag ctcagggact ggagggatgt gagaggaatt 720 tgtcttttgt gatatgcttt atggtctgct cagtcacctc gttcttaatc cctttctcaa 780 cttctatttt atacagaaat tgtgagcata tcagcattaa gtaccactga ggtggcaatg 840 cacacttcaa cctcttcttc agtcacaaag agttacatct catcacagac aaatggtttg 900 ttttcatttt tatttttaaa ttgtggctcc gaaatgattt ttgtgatgca accctatttt 960 aggggacctg tcactgcaga gaaactgaca aacactgaga aatgcgagct aagtagacac 1020 agcctactaa gtagacacaa ttcttactac agaggaattc tagcctctga aatatctcac 1080 agaaataata ctgtgagtta aagaaattaa aacaatgtgg caaagcacag aaatgataca 1140 tgtgaccatg aaatagtggg ccagataaag gggacctaat agtgcggtgg tgcggagggt 1200 ctgtgggcaa aatgagttca gctcagacct gggctcagct ctatcccagc tgctgaccca 1260 gggtgagttg ccctgcaggg tttctatccc attaatttta aaatggggcc aataacacag 1320 tacttatctc acagcatttc tctaaaggct aaataagaag aagtgtctaa aagttattag 1380 ctcagagcct cacacattct cagtgactga taaacaataa gcaaagctgg gtgctgagat 1440 aagagtaatc tggtggcagt ctctcttgtt agttttcagg ggagaagaag aaattctgga 1500 gctgctgctg ggagggatgt gggagaattt gtctttcatg atacgctgta tgtccacgca 1560 gtcacctcat tcttgttccc tttctcaact tctcttatat gcagataagc acaaacggga 1620 cacatatcca gctcatactg ctaatgaagt ttcagaaatt tctgttacaa ctgtttcccc 1680 tccagaaaag aaaaacgtta tgttcttagt tttaaatagt ttctctggag tcattgttgt 1740 gattgaactc tatttacacg agctgtaact catgacagtt ctcaaacttt cgtgacagaa 1800 aacccaactc ttttactcca aagcccatat agcacccaca actattaact gtgaccaaga 1860 aagagaaggc aagccccaat taacctttgt acgtaaagcc taaagaatga aaaaatatac 1920 ctgaatcctc aatcatcaaa caacatagca tatactaagt aatttgtaat aattaaactc 1980 tagaaaattg tgtggctttg gtataagaga gcttcatgac ataaaatggc aagtggagac 2040 agagacaaaa gtaggatgtg gactgagagg gaaggttagc acaggtggaa cagtaaggca 2100 accatactat caattgctac tgacatagaa tccagagaga ctattggcaa aagctcaaat 2160 gagacacagt aacagtttag attcatacag tggctatggc ataaatcaga aaattgatag 2220 ccgcatgacc cttctttgca tgggactggc atctctgtgg agtaatggct ccatatgcct 2280 cctttcttct cattattttt tacatgtttt aaaaatgcat tgcttcttgt ggaagtcaat 2340 aagtgatgct tccaatactt tctcattcct ttcccctcag ttatgagaca atttgcttat 2400 ttctcatcca tgaatacgtg ttgggtcatt aaaagtagat actgaaatta ctaatggtaa 2460 gactgacaca ttacctcata aatgttacta gctagatgtt gaaagttgac caacaactct 2520 caaaatatga ttaagaaaag gaaacccgca gaacagtttg attccaaaat gatttttttc 2580 tttgcacatg tcttacttat ttggacttac attgaaattt tgctttatag gagaaatggg 2640 acaacttgtc catcatttca ctgtaccagg tatgttaata tttgacaaag aataaaagtc 2700 attccatttt aaactatcca ttgcttgttt caaatgccta agaaaatgtg tcaatcttaa 2760 aacagaagag catatgttgt taactttatt cacacgaaat tgtaaagaca aagaaaatat 2820 tctcttttta aaattaaaat aggcatttct tatttttaaa aacattttgg gggccagggg 2880 ccgtggctca tgcctataat ccctataatt ttgggaggcc aagcctggct aatcacttga 2940 gcccaggaat ttgagaacag cctgggcaat atggcaaaat ctatctctac aaaaaataca 3000 aaaattagct gggatggggc atgcacctgt agtctcaact gcttgggagg ctggctgagg 3060 tgggaggatc ggatcgattg cctgagcctg ggagtttgag gctgcagtga gctatgactg 3120 tgccactgta ctctagcctt ggtaagaccc tgtctcaaaa acaaatacat aagtaaataa 3180 aaataaataa aaacattttg gaaatagaaa tacataattt ggtaatagtt tttctcttaa 3240 gttagatgtt ttacctttct aaccaaccct gagtacttga aagaagcctc ataagagctt 3300 ataaaacaag tgaagttccc tctgccctca tgtaaaaagc aaggcattta aaatcatcta 3360 attaactggt actgtatttc aagggtaaat ctcagccttg attcattttt ggcccaatgc 3420 aaccacttag ggaccatctt gacaacctct gctgaaggga catcccttcc cctcacttga 3480 gtatcactgt gtgtgttcat ttgctattct gcattctaac cctcccttca cacttggctg 3540 tgtccacggc tcacagggta aaaagcacat catagaactt catcactatc gcatacattc 3600 aagctaagtg gtcaagaagg ctgggcaaca ccagcaagag gaaatgctac ttttactttt 3660 tgtcaataat ttaaatatta attaggcaaa taaatgagcc attttacctg tatgtctagc 3720 cttccattct atttacttca tctggaagta ctacaaatat gctataaata tggaaatatc 3780 tcttacttaa ttgatttcaa ttgtttcatt cccaacatat aaatgactta acaagcattg 3840 ttagtgacta tattggagac tatgcataag aatactgtgg aaggaataaa gcttagaata 3900 tagatgacct gcattatagt tataattcta cttttaacta gttgtctgac caaggctaag 3960 ttaaccttat tcagcttctt ttcttcattt gtaaactgtt tataccagtt tctttccaaa 4020 attatgattc tatgatctgt tcaatgctct tttatatgtt aagacattgt tttctctcat 4080 aacttccaaa ctatgggaga atttgtgggt ttttttcccc atatctgagg agaacgtcca 4140 ctgagttctt atctacagtt acactagtga agaacgctgg gtctggaatc agaagcctca 4200 ggtcttagtt ctgtcatcaa ctattttgcg accttggaca aaagacttga tcactcacag 4260 tcccagtttc ccacaaggtt actgtaaagc acacaattta aaaaaagaca aaatacacat 4320 aatagtatgt taattgtact ttgtattaaa aggcaaggtg atgttatgct gatgttatct 4380 gtcttatttt tctattgcta tgtggtcatt tatttcagac tttcataatt ttgctgctct 4440 ctttagctcc tgtagtgata atactcatta ttttgtgtgt gatggctggt attattggaa 4500 cgatcctctt aatttcttac agtattcgcc gactgataaa ggtgagaatt cagtttttaa 4560 ttttgctcta aataccagtg tgaacagctc taggagggtt tattcctctg agttcagtta 4620 aactcagaag agaaacagaa ctgcataaaa ttccatcttt ttcaactgga cacatagaag 4680 tcactgtgtt tctctagcag aatttttttt ttgcatttgc ccaattaaag ggaacctcta 4740 aatataagtc tgtcccccat tttcccaatg aaagatctcc ctaagttttt gtctaacttg 4800 ctttcacata ttttgatgga tattgaggaa atattaagat tcttcttata gtatttaacc 4860 tattagtgta aaaaatattt aaaataatat atttacatat gtttaaaact ttggaggagg 4920 ccaaggcagg aggattgctt gagctcagga gtttgagacc agcctgagca aaaaggtgaa 4980 acctagtcta tacaaaaaat atgaaaatta gaaaggcttg gtggtgcaca tgtgtagtat 5040 cagctattca gggggctgaa gtgggaggat tgcttgagcc tcggaaatca aggctgcagt 5100 gagctgtgat catgctactg cactccagcc tgggcaacag agtgagacca tgtctcaata 5160 aatatataaa taaataaata aaaataaaat aaaacttttg cctttcttaa ttctcacatg 5220 ttctgaaaca gattttacaa atttccaccc atgaattctt aacatcagtg attttttttg 5280 aatcattaaa gttttttaaa tttttttttg agacagagtt tccctctgtc acccaggctc 5340 gagtgcaaag tggcgcaatc tctgctcact gcagcctctg cctccctggt tcaagtgatt 5400 ctcgtgcttc agcctccaca gtaattggga ctacaggtgc gggctaccat gcctgactaa 5460 tttttgtatt tttttaatag cagagatggg gtttcgctgt gttggccagg ctggtttcaa 5520 actcctgacc tcaagtgatc cacctgcctt ggcctccaaa gtgctgggat tacaggtgtg 5580 agccactgcg cccggcccta attagggttt ttataaaacc aaaagaactt ggcaacaccc 5640 ctaggtaccc tttagaagcc tccaattggc tacagcctgt gaaggattgg cctgtgacca 5700 atcagaggct gaagtggagg cttagctcat ggtcaagcag aggctgaagt ggaaacttct 5760 tgtcttttta tcacaggcat gaggatgtgg cctgcatgct gcctgatctt gcctagaacc 5820 ggctgcacct gctgttctct tgtttatgca aactggctgc acctgctatt cctttgctta 5880 tgcccc 5886 // ID LN880519; SV 1; linear; genomic DNA; STD; HUM; 5888 BP. XX AC LN880519; XX DT 18-OCT-2016 (Rel. 130, Created) DT 18-OCT-2016 (Rel. 130, Last updated, Version 1) XX DE Homo sapiens partial GYPB gene for glycophorin B, blood group system Ss, S, DE exons 1-6 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5888 RA Gassner C.; RT ; RL Submitted (31-AUG-2015) to the INSDC. RL Department of Molecular Diagnostics and Research (MOC), Blood Transfusion RL Service Zurich, Swiss Red Cross, Ruetistrasse 19, Zurich-Schlieren, 8952, RL SWITZERLAND. XX RN [2] RA Gassner C., Meyer S., Trost N., Sigurdardottir S., Portmann C.; RT "GYPB, GYPB-A and GYPB-AB variants"; RL Unpublished. XX RN [3] RA Meyer S., Vollmert C., Trost N., Sigurdardottir S., Portmann C., RA Gottschalk J., Ries J., Markovic A., Infanti L., Buser A., RA Amar el Dusouqui S., Rigal E., Castelli D., Weingand B., Maier A., RA Sarraj A., Braisch M.C., Thierbach J., Frey B.M., Gassner C.; RT "MALDI-TOF MS based GYPA and GYPB genotyping of 5800 MNSs phenotyped Swiss RT blood donors and evidence for two new St(a) positive haplotypes prevalent RT in Caucasians"; RL Unpublished. XX DR MD5; c150d89e80c1af68ea6cf9b2d8231502. XX FH Key Location/Qualifiers FH FT source 1..5888 FT /organism="Homo sapiens" FT /chromosome="4" FT /map="4q28-q31" FT /isolate="Zurich-MO-00040" FT /mol_type="genomic DNA" FT /cell_type="leukocyte" FT /tissue_type="blood" FT /note="variant GYPB*03(145G>A,Gly49Arg)variant" FT /db_xref="taxon:9606" FT exon 39..131 FT /gene="GYPB" FT /allele="GYPB*03(145G>A,Gly49Arg)variant" FT /number=1 FT CDS join(95..131,798..896,2633..2671,4449..4543,5779..5784) FT /codon_start=1 FT /transl_table=1 FT /gene="GYPB" FT /allele="GYPB*03(145G>A,Gly49Arg)variant" FT /product="glycophorin B, blood group system Ss, S" FT /db_xref="GOA:A0A1E1JP39" FT /db_xref="InterPro:IPR001195" FT /db_xref="InterPro:IPR018938" FT /db_xref="UniProtKB/TrEMBL:A0A1E1JP39" FT /protein_id="CUI25652.1" FT /translation="MYGKIIFVLLLSEIVSISALSTTEVAMHTSTSSSVTKSYISSQTN FT GEMRQLVHRFTVPAPVVIILIILCVMAGIIGTILLISYSIRRLIKA" FT gap 331..430 FT /estimated_length=100 FT exon 798..896 FT /gene="GYPB" FT /allele="GYPB*03(145G>A,Gly49Arg)variant" FT /number=2 FT intron 897..2632 FT /gene="GYPB" FT /allele="GYPB*03(145G>A,Gly49Arg)variant" FT /number=2 FT exon 2633..2671 FT /gene="GYPB" FT /allele="GYPB*03(145G>A,Gly49Arg)variant" FT /number=3 FT intron 2672..4448 FT /gene="GYPB" FT /allele="GYPB*03(145G>A,Gly49Arg)variant" FT /number=3 FT exon 4449..4543 FT /gene="GYPB" FT /allele="GYPB*03(145G>A,Gly49Arg)variant" FT /number=4 FT intron 4544..5778 FT /gene="GYPB" FT /allele="GYPB*03(145G>A,Gly49Arg)variant" FT /number=4 FT exon 5779..5784 FT /gene="GYPB" FT /allele="GYPB*03(145G>A,Gly49Arg)variant" FT /number=5 XX SQ Sequence 5888 BP; 1764 A; 1122 C; 1098 G; 1804 T; 100 other; taacagctag taggctaagg ccagacactg acacttgcag ttgtctttgg tagttttttt 60 gcactaactt caggaaccag ctcatgatct caggatgtat ggaaaaataa tctttgtatt 120 actattgtca ggtaagtgat tttatttcat cttggttctg ttatattggg tatgagatca 180 tagaataaaa tatgaactac cctatttcag ttctatctta tttaaatcaa taaatgagta 240 gtatttcctc ttccagtctg gtggatggat tttactggaa ctcagctacc aatgtggggg 300 aaatgacgca agggagccca gtatttatga nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 420 nnnnnnnnnn ctaacacata cacatcacat acacacacat accacataca cacacatatt 480 taaactaatt cgttctcaca atgacatttt gaggcaagta ttactattgt acagatgaga 540 aaaccaaggc acactttatc tgtaaacctc tgctgtacaa aaattctgga ggggcttctg 600 gccccttaat tttaaaataa ggccaataat acaatactta ccacgcagca attctctaaa 660 gattatgtaa gatatatact aaagcgctta gctcagggac tggagggatg tgagaggaat 720 ttgtcttttg tgatatgctt tatggtctgc tcagtcacct cgttcttaat ccctttctca 780 acttctattt tatacagaaa ttgtgagcat atcagcatta agtaccactg aggtggcaat 840 gcacacttca acctcttctt cagtcacaaa gagttacatc tcatcacaga caaatggttt 900 gttttcattt ttatttttaa attgtggctc cgaaatgatt tttgtgatgc aaccctattt 960 taggggacct gtcactgcag agaaactgac aaacactgag aaatgcgagc taagtagaca 1020 cagcctacta agtagacaca attcttacta cagaggaatt ctagcctctg aaatatctca 1080 cagaaataat actgtgagtt aaagaaatta aaacaatgtg gcaaagcaca gaaatgatac 1140 atgtgaccat gaaatagtgg gccagataaa ggggacctaa tagtgcggtg gtgcggaggg 1200 tctgtgggca aaatgagttc agctcagacc tgggctcagc tctatcccag ctgctgaccc 1260 agggtgagtt gccctgcagg gtttctatcc cattaatttt aaaatggggc caataacaca 1320 gtacttatct cacagcattt ctctaaaggc taaataagaa gaagtgtcta aaagttatta 1380 gctcagagcc tcacacattc tcagtgactg ataaacaata agcaaagctg ggtgctgaga 1440 taagagtaat ctggtggcag tctctcttgt tagttttcag gggagaagaa gaaattctgg 1500 agctgctgct gggagggatg tgggagaatt tgtctttcat gatacgctgt atgtccacgc 1560 agtcacctca ttcttgttcc ctttctcaac ttctcttata tgcagataag cacaaacggg 1620 acacatatcc agctcatact gctaatgaag tttcagaaat ttctgttaca actgtttccc 1680 ctccagaaaa gaaaaacgtt atgttcttag ttttaaatag tttctctgga gtcattgttg 1740 tgattgaact ctatttacac gagctgtaac tcatgacagt tctcaaactt tcgtgacaga 1800 aaacccaact cttttactcc aaagcccata tagcacccac aactattaac tgtgaccaag 1860 aaagagaagg caagccccaa ttaacctttg tacgtaaagc ctaaagaatg aaaaaatata 1920 cctgaatcct caatcatcaa acaacatagc atatactaag taatttgtaa taattaaact 1980 ctagaaaatt gtgtggcttc ggtagtaaga gagcttcatg acataaaatg gcaagtggag 2040 acagagacaa aagtaggatg tggactgaga gggaaggtta gcacaggtgg aacagtaagg 2100 caaccatact atcaattgct actgacatag aatccagaga gactattggc aaaagctcaa 2160 atgagacaca gtaacagttt agattcatac agtggctatg gcataaatca gaaaattgat 2220 agccgcatga cccttctttg catgggactg gcatctctgt ggagtaatgg ctccatatgc 2280 ctcctttctt ctcattattt tttacatgtt ttaaaaatgc attgcttctt gtggaagtca 2340 ataagtgatg cttccaatac tttctcattc ctttcccctc agttatgaga caatttgctt 2400 atttctcatc catgaatacg tgttgggtca ttaaaagtag atactgaaat tactaatggt 2460 aagactgaca cattacctca taaatgttac tagctagatg ttgaaagttg accaacaact 2520 ctcaaaatat gattaagaaa aggaaacccg cagaacagtt tgattccaaa atgatttttt 2580 tctttgcaca tgtcttactt atttggactt acattgaaat tttgctttat aggagaaatg 2640 agacaacttg tccatcgttt cactgtacca ggtatgttaa tatttgacaa agaataaaag 2700 tcattccatt ttaaactatc cattgcttgt ttcaaatgcc taagaaaatg tgtcaatctt 2760 aaaacagaag agcatatgtt gttaacttta ttcacacgaa attgtaaaga caaagaaaat 2820 attctctttt taaaattaaa ataggcattt cttattttta aaaacatttt gggggccagg 2880 ggccgtggct catgcctata atccctataa ttttgggagg ccaagcctgg ctaatcactt 2940 gagcccagga atttgagaac agcctgggca atatggcaaa atctatctct acaaaaaata 3000 caaaaattag ctgggatggg gcatgcacct gtagtctcaa ctgcttggga ggctggctga 3060 ggtgggagga tcggattgat tgcctgagcc tgggagtttg aggctgcagt gagctatgac 3120 tgtgccactg tactctagcc ttggtaagac cctgtctcaa aaacaaatac ataagtaaat 3180 aaaaataaat aaaaacattt tggaaataga aatacataat ttggtaatag tttttctctt 3240 aagttagatg ttttaccttt ctaaccaacc ctgagtactt gaaagaagcc tcataagagc 3300 ttataaaaca agtgaagttc cctctgccct catgtaaaaa gcaaggcatt taaaatcatc 3360 taattaactg gtactgtatt tcaagggtaa atctcagcct tgattcattt ttggcccaat 3420 gcaaccactt agggaccatc ttgacaacct ctgctgaagg gacatccctt cccctcactt 3480 gagtatcact gtgtgtgttc atttgctatt ctgcattcta accctccctt cacacttggc 3540 tgtgtccacg gctcacaggg taaaaagcac atcatagaac ttcatcacta tcgcatacat 3600 tcaagctaag tggtcaagaa ggctgggcaa caccagcaag aggaaatgct acttttactt 3660 tttgtcaata atttaaatat taattaggca aataaatgag ccattttacc tgtatgtcta 3720 gccttccatt ctatttactt catctggaag tactacaaat atgctataaa tatggaaata 3780 tctcttactt aattgatttc aattgtttca ttcccaacat ataaatgact taacaagcat 3840 tgttagtgac tatattggag actatgcata agaatactgt ggaaggaata aagcttagaa 3900 tatagatgac ctgcattata gttataattc tacttttaac tagttgtctg accaaggcta 3960 agttaacctt attcagcttc ttttcttcat ttgtaaactg tttataccag tttctttcca 4020 aaattatgat tctatgatct gttcaatgct cttttatatg ttaagacatt gttttctctc 4080 ataacttcca aactatggga gaatttgtgg gtttttttcc ccatatctga ggagaacgtc 4140 cactgagttc ttatctacag ttacactagt gaagaacgct gggtctggaa tcagaagcct 4200 caggtcttag ttctgtcatc aactattttg cgaccttgga caaaagactt gatcactcac 4260 agtcccagtt tcccacaagg ttactgtaaa gcacacaatt taaaaaaaga caaaatacac 4320 ataatagtat gttaattgta ctttgtatta aaaggcaagg tgatgttatg ctgatgttat 4380 ctgtcttatt tttctattgc tatgtggtca tttatttcag actttcataa ttttgctgct 4440 ctctttagct cctgtagtga taatactcat tattttgtgt gtgatggctg gtattattgg 4500 aacgatcctc ttaatttctt acagtattcg ccgactgata aaggtgagaa ttcagttttt 4560 aattttgctc taaataccag tgtgaacagc tctaggaggg tttattcctc tgagttcagt 4620 taaactcaga agagaaacag aactgcataa aattccatct ttttcaactg gacacataga 4680 agtcactgtg tttctctagc agaatttttt ttttgcattt gcccaattaa agggaacctc 4740 taaatataag tctgtccccc attttcccaa tgaaagatct ccctaagttt ttgtctaact 4800 tgctttcaca tattttgatg gatattgagg aaatattaag attcttctta tagtatttaa 4860 cctattagtg taaaaaatat ttaaaataat atatttacat atgtttaaaa ctttggagga 4920 ggccaaggca ggaggattgc ttgagctcag gagtttgaga ccagcctgag caaaaaggtg 4980 aaacctagtc tatacaaaaa atatgaaaat tagaaaggct tggtggtgca catgtgtagt 5040 atcagctatt cagggggctg aagtgggagg attgcttgag cctcggaaat caaggctgca 5100 gtgagctgtg atcatgctac tgcactccag cctgggcaac agagtgagac catgtctcaa 5160 taaatatata aataaataaa taaaaataaa ataaaacttt tgcctttctt aattctcaca 5220 tgttctgaaa cagattttac aaatttccac ccatgaattc ttaacatcag tgattttttt 5280 tgaatcatta aagtttttta aatttttttt tgagacagag tttccctctg tcacccaggc 5340 tcgagtgcaa agtggcgcaa tctctgctca ctgcagcctc tgcctccctg gttcaagtga 5400 ttctcgtgct tcagcctcca cagtaattgg gactacaggt gcgggctacc atgcctgact 5460 aatttttgta tttttttaat agcagagatg gggtttcgct gtgttggcca ggctggtttc 5520 aaactcctga cctcaagtga tccacctgcc ttggcctcca aagtgctggg attacaggtg 5580 tgagccactg cgcccggccc taattagggt ttttataaaa ccaaaagaac ttggcaacac 5640 ccctaggtac cctttagaag cctccaattg gctacagcct gtgaaggatt ggcctgtgac 5700 caatcagagg ctgaagtgga ggcttagctc atggtcaagc agaggctgaa gtggaaactt 5760 cttgtctttt tatcacaggc atgaggatgt ggcctgcatg ctgcctgatc ttgcctagaa 5820 ccggctgcac ctgctgttct cttgtttatg caaactggct gcacctgcta ttcctttgct 5880 tatgcccc 5888 // ID LN880520; SV 1; linear; genomic DNA; STD; HUM; 3517 BP. XX AC LN880520; XX DT 16-SEP-2015 (Rel. 126, Created) DT 21-JUL-2017 (Rel. 133, Last updated, Version 2) XX DE Homo sapiens HLA-A gene for MHC class I antigen, allele A*66:17 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3517 RA Albrecht V.; RT ; RL Submitted (25-AUG-2015) to the INSDC. RL Research and Development, DKMS LIFE SCIENCE LAB, Fiedler Str. 43, Saxony, RL 01307 Dresden, GERMANY. XX RN [2] RX DOI; .1111/tan.13057. RX PUBMED; 28547825. RA Albrecht V., Zweiniger C., Surendranath V., Lang K., Schofl G., Dahl A., RA Winkler S., Lange V., Bohme I., Schmidt A.H.; RT "Dual redundant sequencing strategy: Full-length gene characterisation of RT 1056 novel and confirmatory HLA alleles"; RL HLA. 90(2):79-87(2017). XX DR MD5; c293b47ec49e1a43c086b77055998f17. DR IMGT/HLA; HLA-A*66:17; HLA08116. XX FH Key Location/Qualifiers FH FT source 1..3517 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL-A-466" FT /db_xref="taxon:9606" FT exon 1..373 FT /gene="HLA-A" FT /allele="A*66:17" FT /number=1 FT CDS join(301..373,504..773,1015..1290,1891..2166,2266..2382, FT 2821..2853,2996..3043,3213..3217) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-A" FT /allele="A*66:17" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:I2HA75" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:I2HA75" FT /protein_id="CUI25653.1" FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAQSQTDRVDLGT FT LRGYYNQSEDGSHTIQRMYGCDVGPDGRFLRGYQQDAYDGKDYIALNEDLRSWTAADMA FT AQITQRKWETAHEAEQWRAYLEGRCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPVEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWASVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVIAGAVVAAVMWRRKSSDRK FT GGSYSQAASSDSAQGSDMSLTACKV" FT intron 374..503 FT /gene="HLA-A" FT /allele="A*66:17" FT /number=1 FT exon 504..773 FT /gene="HLA-A" FT /allele="A*66:17" FT /number=2 FT intron 774..1014 FT /gene="HLA-A" FT /allele="A*66:17" FT /number=2 FT exon 1015..1290 FT /gene="HLA-A" FT /allele="A*66:17" FT /number=3 FT intron 1291..1890 FT /gene="HLA-A" FT /allele="A*66:17" FT /number=3 FT exon 1891..2166 FT /gene="HLA-A" FT /allele="A*66:17" FT /number=4 FT intron 2167..2265 FT /gene="HLA-A" FT /allele="A*66:17" FT /number=4 FT exon 2266..2382 FT /gene="HLA-A" FT /allele="A*66:17" FT /number=5 FT intron 2383..2820 FT /gene="HLA-A" FT /allele="A*66:17" FT /number=5 FT exon 2821..2853 FT /gene="HLA-A" FT /allele="A*66:17" FT /number=6 FT intron 2854..2995 FT /gene="HLA-A" FT /allele="A*66:17" FT /number=6 FT exon 2996..3043 FT /gene="HLA-A" FT /allele="A*66:17" FT /number=7 FT intron 3044..3212 FT /gene="HLA-A" FT /allele="A*66:17" FT /number=7 FT exon 3213..3517 FT /gene="HLA-A" FT /allele="A*66:17" FT /number=8 XX SQ Sequence 3517 BP; 666 A; 1018 C; 1074 G; 759 T; 0 other; caggagcaga ggggtcaggg cgaagtccca gggccccagg cgtggctctc agggtctcag 60 gccccgaagg cggtatatgg attggggagt cccagccttg gggattcccc aactccgcag 120 tttcttttct ccctctccca acctatgtag ggtccttctt cctggatact cacgacgcgg 180 acccagttct cactcccatt gggtgtcggg tttccagaga agccaatcag tgtcgtcgcg 240 gtcgcggttc taaagtccgc acgcacccac cgggactcag attctcccca gacgccgagg 300 atggccgtca tggcgccccg aaccctcgtc ctgctactct cgggggccct ggccctgacc 360 cagacctggg cgggtgagtg cggggtcggg agggaaacgg cctctgtggg gagaagcaag 420 gggcccgccc ggcgggggcg caggacccgg gaagccgcgc ctggaggagg gtcgggcggg 480 tctcagccac tcctcgcccc caggctccca ctccatgagg tatttctaca cctccgtgtc 540 ccggcccggc cgcggggagc cccgcttcat cgccgtgggc tacgtggacg acacgcagtt 600 cgtgcggttc gacagcgacg ccgcgagcca gaggatggag ccgcgggcgc cgtggataga 660 gcaggagggg ccggagtatt gggaccggaa cacacggaat gtgaaggccc agtcacagac 720 tgaccgagtg gacctgggga ccctgcgcgg ctactacaac cagagcgagg acggtgagtg 780 accccggccc ggggcgcagg tcacgacccc tcatccccca cggacgggcc aggtcgccca 840 cagtctccgg gtccgagatc cgccccgaag ccgcgggacc ccgagaccct tgccccggga 900 gaggcccagg cgcctttacc cggtttcatt ttcagtttag gccaaaaatc cccccgggtt 960 ggtcggggcg gggcggggct cgggggaccg ggctgacctc ggggtccggg ccaggttctc 1020 acaccatcca gaggatgtat ggctgcgacg tggggccgga cgggcgcttc ctccgcgggt 1080 accagcagga cgcttacgac ggcaaggatt acatcgccct gaacgaggac ctgcgctctt 1140 ggaccgcggc ggacatggcg gctcagatca cccagcgcaa gtgggagacg gcccatgagg 1200 cggagcagtg gagagcctac ctggagggcc ggtgcgtgga gtggctccgc agatacctgg 1260 agaacgggaa ggagacgctg cagcgcacgg gtaccagggg ccacggggcg cctccctgat 1320 cgcctgtaga tctcccgggc tggcctccca caaggagggg agacaattgg gaccaacact 1380 agaatatcgc cctccctctg gtcctgaggg agaggaatcc tcctgggttt ccagatcctg 1440 taccagagag tgactctgag gttccgccct gctctctgac acaattaagg gataaaatct 1500 ctgaaggaat gacgggaaga cgatccctcg aatactgatg agtggttccc tttgacacac 1560 accggcagca gccttgggcc cgtgactttt cctctcaggc cttgttctct gcttcacact 1620 caatgtgtgt gggggtctga gtccagcact tctgagtccc tcagcctcca ctcaggtcag 1680 gaccagaagt cgctgttccc tcttcaggga ctagaatttt ccacggaata ggagattatc 1740 ccaggtgcct gtgtccaggc tggtgtctgg gttctgtgct cccttcccca tcccaggtgt 1800 cctgtccatt ctcaagatag ccacatgtgt gctggaggag tgtcccatga cagatgcaaa 1860 atgcctgaat gttctgactc ttcctgacag acgcccccaa gacgcatatg actcaccacg 1920 ctgtctctga ccatgaggcc accctgaggt gctgggccct gagcttctac cctgtggaga 1980 tcacactgac ctggcagcgg gatggggagg accagaccca ggacacggag ctcgtggaga 2040 ccaggcctgc aggggatggg accttccaga agtgggcgtc tgtggtggtg ccttctggac 2100 aggagcagag atacacctgc catgtgcagc atgagggtct gcccaagccc ctcaccctga 2160 gatggggtaa ggagggagac gggggtgtca tgtcttttag ggaaagcagg agcctctctg 2220 acctttagca gggtcagggc ccctcacctt cccctctttt cccagagccg tcttcccagc 2280 ccaccatccc catcgtgggc atcattgctg gcctggttct ctttggagct gtgatcgctg 2340 gagctgtggt cgctgctgtg atgtggagga ggaagagctc aggtggggaa gggatgaagg 2400 gtgggtctga gatttcttgt ctcactgagg gttccaagac ccaggtagaa gtgtgccctg 2460 cctcgttact gggaagcacc atccacaatt atgagcctac ccagcctggg ccctgtgtgc 2520 cagcacttac tcttttgtaa agcacctgtt aaaatgaagg acagatttat caccttgatt 2580 acggcggtga tgggacctga tcccagcagt cacaagtcac aggggaaggt ccctgaggac 2640 cttcaggagg gcggttggtc caggacccac acctgctttc ttcatgtttc ctgatcccgc 2700 cctgggtctg cagtcacaca tttctggaaa cttctctgag gtccaagact tggaggttcc 2760 tctaggacct taaggccctg gctcctttct ggtatctcac aggacatttt cttcccacag 2820 atagaaaagg agggagctac tctcaggctg caagtaagta tgaaggaggc tgatgcctga 2880 ggtccttggg atattgtgtt tgggagcccg tgggggagct cacccacccc acaattcctc 2940 ctctagccac atgttctgtg ggatctgacc aggttctgtt tttgtcctac cccaggcagt 3000 gacagtgccc agggctctga tatgtctctc acagcttgta aaggtgagag cctggagggc 3060 ctgatgtgtg ttgggtgttg ggcggaacag tggacgcagc tgtgctatgg ggtttctttg 3120 cattggatgt attgagcatg cgatgggctg tttaaagtgt gactcctcac tgtgacagat 3180 acgaatttgt tcatgaatat ttttttctat agtgtgagac agctgccttg tgtgggactg 3240 agaggcaaga tttgttcctg cccttccctt tgtgacttga agaaccctga ctttgtttct 3300 gcaaaggcac ctgcatgtgt ctgtgttctt gtaggcataa tgtgaggagg tggggagacc 3360 accccacccc catgtccacc atgaccctct tcccacgctg acctgtgctc cctccccaat 3420 catctttcct gttccagaga ggtggggctg aggtgtctcc atctctgcct caacttcatg 3480 gtgcactgag ctgtaacttt ttccttccct attaaaa 3517 // ID LN880521; SV 1; linear; genomic DNA; STD; HUM; 3518 BP. XX AC LN880521; XX DT 16-SEP-2015 (Rel. 126, Created) DT 21-JUL-2017 (Rel. 133, Last updated, Version 2) XX DE Homo sapiens HLA-A gene for MHC class I antigen, allele A*29new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3518 RA Albrecht V.; RT ; RL Submitted (25-AUG-2015) to the INSDC. RL Research and Development, DKMS LIFE SCIENCE LAB, Fiedler Str. 43, Saxony, RL 01307 Dresden, GERMANY. XX RN [2] RX DOI; .1111/tan.13057. RX PUBMED; 28547825. RA Albrecht V., Zweiniger C., Surendranath V., Lang K., Schofl G., Dahl A., RA Winkler S., Lange V., Bohme I., Schmidt A.H.; RT "Dual redundant sequencing strategy: Full-length gene characterisation of RT 1056 novel and confirmatory HLA alleles"; RL HLA. 90(2):79-87(2017). XX DR MD5; 047ab76f49050ff2fe818a751b3c2c50. DR Ensembl-Gn; ENSG00000231834; homo_sapiens. DR Ensembl-Tr; ENST00000550728; homo_sapiens. DR IMGT/HLA; HLA-A*29:02:16; HLA13431. XX FH Key Location/Qualifiers FH FT source 1..3518 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL-A-497" FT /db_xref="taxon:9606" FT exon 1..373 FT /gene="HLA-A" FT /allele="A*29new" FT /number=1 FT CDS join(301..373,503..772,1014..1289,1890..2165,2265..2381, FT 2822..2854,2997..3044,3214..3218) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-A" FT /allele="A*29new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:B0UXQ0" FT /db_xref="HGNC:HGNC:4931" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:B0UXQ0" FT /protein_id="CUI25654.1" FT /translation="MAVMAPRTLLLLLLGALALTQTWAGSHSMRYFTTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDLQTRNVKAQSQTDRANLGT FT LRGYYNQSEAGSHTIQMMYGCDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMA FT AQITQRKWEAARVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWASVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVFAGAVVAAVRWRRKSSDRK FT GGSYSQAASSDSAQGSDMSLTACKV" FT intron 374..502 FT /gene="HLA-A" FT /allele="A*29new" FT /number=1 FT exon 503..772 FT /gene="HLA-A" FT /allele="A*29new" FT /number=2 FT intron 773..1013 FT /gene="HLA-A" FT /allele="A*29new" FT /number=2 FT exon 1014..1289 FT /gene="HLA-A" FT /allele="A*29new" FT /number=3 FT intron 1290..1889 FT /gene="HLA-A" FT /allele="A*29new" FT /number=3 FT exon 1890..2165 FT /gene="HLA-A" FT /allele="A*29new" FT /number=4 FT intron 2166..2264 FT /gene="HLA-A" FT /allele="A*29new" FT /number=4 FT exon 2265..2381 FT /gene="HLA-A" FT /allele="A*29new" FT