ID AY832281; SV 1; linear; genomic DNA; STD; PLN; 236 BP. XX AC AY832281; XX DT 28-DEC-2004 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Zamia integrifolia ribosomal protein S19 (rps19) gene, partial cds; DE mitochondrial. XX KW . XX OS Zamia integrifolia OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Cycadidae; Cycadales; Zamiaceae; Zamia. OG Mitochondrion XX RN [1] RP 1-236 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-236 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; 7ad2c9d216860ae995336ffc6365f0bb. XX FH Key Location/Qualifiers FH FT source 1..236 FT /organism="Zamia integrifolia" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:3305" FT gene <1..>236 FT /gene="rps19" FT CDS <1..>236 FT /codon_start=3 FT /gene="rps19" FT /product="ribosomal protein S19" FT /db_xref="GOA:Q5MEZ6" FT /db_xref="InterPro:IPR002222" FT /db_xref="InterPro:IPR023575" FT /db_xref="UniProtKB/TrEMBL:Q5MEZ6" FT /protein_id="AAW30367.1" FT /translation="PRRSIWKGSSVDALSSKMRSKRENLSSRRIRSRRSPILPESVDCF FT VRIYNGKTSVRCKITEGKVGHKSGESASTRKRR" XX SQ Sequence 236 BP; 69 A; 46 C; 59 G; 62 T; 0 other; tgccacgacg atctatatgg aagggcagtt ccgttgatgc tctctcgtcg aaaatgagga 60 gcaagagaga gaatctttct agcaggagaa ttcggtcacg tagatctccc attttgccag 120 aatctgttga ttgcttcgta cgaatttata acggaaaaac ttctgttcgt tgcaagatca 180 ctgaaggaaa ggttggtcat aaatctggag agtccgcttc tacacggaaa cgaaga 236 // ID AY832282; SV 1; linear; genomic DNA; STD; PLN; 238 BP. XX AC AY832282; XX DT 28-DEC-2004 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Eschscholzia californica ribosomal protein S19 (rps19) gene, partial cds; DE mitochondrial. XX KW . XX OS Eschscholzia californica (California poppy) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Ranunculales; Papaveraceae; OC Eschscholzioideae; Eschscholzia. OG Mitochondrion XX RN [1] RP 1-238 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-238 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; eb1f8d2a8c4e3d6783c9c788748589f0. XX FH Key Location/Qualifiers FH FT source 1..238 FT /organism="Eschscholzia californica" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:3467" FT gene <1..>238 FT /gene="rps19" FT CDS <1..>238 FT /codon_start=1 FT /gene="rps19" FT /product="ribosomal protein S19" FT /db_xref="GOA:Q5MEZ5" FT /db_xref="InterPro:IPR002222" FT /db_xref="InterPro:IPR020934" FT /db_xref="InterPro:IPR023575" FT /db_xref="UniProtKB/TrEMBL:Q5MEZ5" FT /protein_id="AAW30368.1" FT /translation="MPRRSIWKGTFVDAFLLRMKKKRDLLLNREIWSRRSSISPEFVDC FT SVRIYNGKTPVRCKITEGKVGHKFGEFAXTRRRR" XX SQ Sequence 238 BP; 71 A; 37 C; 58 G; 71 T; 1 other; atgccacgac gatctatatg gaagggcact tttgttgatg cattcctgtt gagaatgaag 60 aagaaaagag atcttctttt gaacagggaa atttggtcac gtagatcttc tatttcgccg 120 gaattcgttg attgctccgt acgaatttac aatggaaaaa ctcctgttcg ttgtaagatc 180 actgaaggaa aggttggtca taaatttgga gagtttgctt ntacacggag acgaagaa 238 // ID AY832283; SV 1; linear; genomic DNA; STD; PLN; 186 BP. XX AC AY832283; XX DT 28-DEC-2004 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Lonicera sp. Bergthorsson 0301 ribosomal protein S19 (rps19) gene, partial DE cds; mitochondrial. XX KW . XX OS Lonicera sp. Bergthorsson 0301 OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC asterids; campanulids; Dipsacales; Caprifoliaceae; Lonicera; OC unclassified Lonicera. OG Mitochondrion XX RN [1] RP 1-186 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-186 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; ade4fb6e6b8e6f08c809a41c87051e45. XX FH Key Location/Qualifiers FH FT source 1..186 FT /organism="Lonicera sp. Bergthorsson 0301" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:232617" FT gene <1..>186 FT /gene="rps19" FT CDS <1..>186 FT /codon_start=1 FT /gene="rps19" FT /product="ribosomal protein S19" FT /db_xref="GOA:Q5MEZ4" FT /db_xref="InterPro:IPR002222" FT /db_xref="InterPro:IPR023575" FT /db_xref="UniProtKB/TrEMBL:Q5MEZ4" FT /protein_id="AAW30369.1" FT /translation="MPRRSIWKGSFVDAFLLRMKKKRDLLLNRKIWSRRSSISPEFVDC FT SVRIYNGKTPVRVRYEG" XX SQ Sequence 186 BP; 56 A; 30 C; 44 G; 56 T; 0 other; atgccacgac gatctatatg gaagggcagt tttgttgatg cattcctgtt gagaatgaag 60 aagaagagag atcttctttt gaacaggaaa atttggtcac gtagatcttc tatttcaccg 120 gaattcgttg attgctccgt acgaatttac aatggaaaaa ctcctgttcg tgtaagatac 180 gaagga 186 // ID AY832284; SV 1; linear; genomic DNA; STD; PLN; 223 BP. XX AC AY832284; XX DT 28-DEC-2004 (Rel. 82, Created) DT 15-JAN-2005 (Rel. 82, Last updated, Version 2) XX DE Amborella trichopoda ribosomal protein S19 (rps19) pseudogene, partial DE sequence; mitochondrial. XX KW . XX OS Amborella trichopoda OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella. OG Mitochondrion XX RN [1] RP 1-223 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-223 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; 48c54e2db7747b6088b2220948e4d6b1. XX CC putative HGT copy. XX FH Key Location/Qualifiers FH FT source 1..223 FT /organism="Amborella trichopoda" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:13333" FT gene <1..>223 FT /pseudo FT /gene="rps19" FT /note="ribosomal protein S19; putative HGT copy" XX SQ Sequence 223 BP; 70 A; 36 C; 51 G; 66 T; 0 other; atgccacgac gatctatatg gaagggcagt tttgttgatg cattcctgtt gagaatgaag 60 aagaagagag atcttctttt gaacaggaaa atttggtcac gtagatcaac ttctattttg 120 ccggaaacca tacgaaaatt gctccgtacg aatttacaat ggaaaaactc ctgttcgttg 180 taagatcact gaaggaaagg ttggtcaacc attttgagag ttt 223 // ID AY832285; SV 1; linear; genomic DNA; STD; PLN; 216 BP. XX AC AY832285; XX DT 28-DEC-2004 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Amborella trichopoda ribosomal protein S19 (rps19) gene, partial cds; DE mitochondrial. XX KW . XX OS Amborella trichopoda OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella. OG Mitochondrion XX RN [1] RP 1-216 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-216 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; ae448b2d06a62964ddb3b96977268c5d. XX FH Key Location/Qualifiers FH FT source 1..216 FT /organism="Amborella trichopoda" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:13333" FT gene <1..>216 FT /gene="rps19" FT CDS <1..>216 FT /codon_start=1 FT /gene="rps19" FT /product="ribosomal protein S19" FT /db_xref="GOA:Q5MEZ3" FT /db_xref="InterPro:IPR002222" FT /db_xref="InterPro:IPR023575" FT /db_xref="UniProtKB/TrEMBL:Q5MEZ3" FT /protein_id="AAW30370.1" FT /translation="MPRRSIWKGSFVDAFLLRMKNKRENLFSRRIWSRRSNIEPEFVDC FT SVRIYNGKSPVRCKITEGKVGHKFGEF" XX SQ Sequence 216 BP; 67 A; 29 C; 55 G; 65 T; 0 other; atgccacgac gatctatatg gaagggcagt tttgttgatg ctttcctgtt gagaatgaag 60 aacaaaagag agaatctttt tagcaggaga atttggtcac gtagatcaaa tattgagccg 120 gaattcgttg attgctccgt acgaatttac aatggaaaaa gtcctgttcg ttgtaagatc 180 actgaaggaa aggttggtca taaatttgga gagttt 216 // ID AY832286; SV 1; linear; genomic DNA; STD; PLN; 959 BP. XX AC AY832286; XX DT 12-JAN-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Calycanthus floridus ribosomal protein S4 (rps4) gene, partial cds; DE mitochondrial. XX KW . XX OS Calycanthus floridus OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Magnoliidae; Laurales; Calycanthaceae; OC Calycanthus. OG Mitochondrion XX RN [1] RP 1-959 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-959 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; a0fc096811b54df68f1c97647d489a36. XX FH Key Location/Qualifiers FH FT source 1..959 FT /organism="Calycanthus floridus" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:3429" FT gene <1..>959 FT /gene="rps4" FT CDS <1..>959 FT /codon_start=3 FT /gene="rps4" FT /product="ribosomal protein S4" FT /db_xref="GOA:Q5IA12" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR022801" FT /db_xref="InterPro:IPR036986" FT /db_xref="UniProtKB/TrEMBL:Q5IA12" FT /protein_id="AAW47270.1" FT /translation="LRFKTCRPLPGNVRNRELTIIQRRILRRLRNKKRSIKRKIYPREN FT LNSYIKLQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFRETIP FT QARQPISHRRVCVNNGMVSITHLKVSHGDLISFKENDARTCGEEIRRSFYIDISVEKII FT GKFLDHPVRMWRRTKTEWFRLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEK FT VCLGSSFAEHNRMKRNLYHFKFVFLSKRRNEKNRNLPTRTISPLVKNSSLYSNSTYCSG FT SPHQFTRKRRIKRIELPTHYSEVNHRTPKAVVSYGPNI" XX SQ Sequence 959 BP; 338 A; 192 C; 186 G; 243 T; 0 other; cattaagatt taaaacttgt cgtccacttc caggaaatgt tcggaacaga gaacttacaa 60 taatacaacg ccgcattctc cgaagattga ggaacaagaa gagatctatt aagagaaaga 120 tttatccgag agaaaatcta aacagttaca tcaaattaca aactacacga aagttgcccc 180 tttttcatgg ggatttaccc atcacagaga tgcacagagg aacagaacga acttcatata 240 tcccttttcc actcaatcca gaaacaagat cggacgttat tccggttcgt ctccattttc 300 gtgaaactat tcctcaagca aggcagccga taagtcatcg aagggtttgt gtgaataatg 360 gaatggtaag cattactcat ttgaaagtgt cccacggtga tctaatatct tttaaagaaa 420 atgacgcgag aacctgcggt gaagaaataa ggagatcttt ctatatcgac atatcagttg 480 aaaaaataat aggcaaattc ctggatcacc cggtaagaat gtggagaaga accaaaacag 540 aatggttccg cctactcaaa actaagaggg ggtgccgcct actactcaaa tcccggtttt 600 tgcaacagtt gcgttcttct atgcaagaag aagacttaga aagaacaaag aagtttggat 660 ccgaaaaagt atgcttaggc agttccttcg ctgagcacaa cagaatgaag aggaatttgt 720 atcatttcaa attcgtattc ttatcgaaga gaaggaacga gaaaaaccga aatcttccta 780 ctcgaacaat aagtccttta gtgaaaaact cttctttata tagtaattcg acctattgct 840 ccggatcccc ccatcagttt actaggaaga gaagaatcaa aaggatcgaa ctacctactc 900 attattcgga ggtgaatcat agaacaccaa aagctgtggt atcttatgga cctaacata 959 // ID AY832287; SV 1; linear; genomic DNA; STD; PLN; 935 BP. XX AC AY832287; XX DT 12-JAN-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Eichhornia crassipes ribosomal protein S4 (rps4) gene, partial cds; DE mitochondrial. XX KW . XX OS Eichhornia crassipes (water hyacinth) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Commelinales; Pontederiaceae; OC Eichhornia. OG Mitochondrion XX RN [1] RP 1-935 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-935 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; bbef44121418a9b959d43a7a7d705de5. XX FH Key Location/Qualifiers FH FT source 1..935 FT /organism="Eichhornia crassipes" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:44947" FT gene <1..>935 FT /gene="rps4" FT CDS <1..>935 FT /codon_start=3 FT /gene="rps4" FT /product="ribosomal protein S4" FT /db_xref="GOA:Q5IA11" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR022801" FT /db_xref="InterPro:IPR036986" FT /db_xref="UniProtKB/TrEMBL:Q5IA11" FT /protein_id="AAW47271.1" FT /translation="LRFKTCRLLLGNVRNRELSLIQRRILRRLRNKRKSIKRNLSLREN FT RNSNIKSQTTRKLPLFYGDLPIREMHRGRERTSYIPFLLNQETRSDVIPVRLHFSDTLP FT QARQPISHRRVCVNNGLVSITHFQVSHGDQISFHENDAGEEKKIRRSFYIDISVGKIIG FT KFLPVRMWRRTKTEWFRLLKTQRGCRLLLKSRFLQELRSSMQEEYLERTKRFGSAKVCL FT GSSFAEHNRMKKNLFHFKYFFLLKRRNEKNPTRTRNPFVYKSSLYSNSTYCSGSPFTRK FT IRIKRIELPNHYPEINHRTPKAVVSYGPNI" XX SQ Sequence 935 BP; 324 A; 185 C; 180 G; 246 T; 0 other; cattaagatt taaaacgtgt cgtctacttc taggaaatgt tcggaacaga gaactttctc 60 taatacaacg ccgcattctc cgaagattga ggaacaagag gaaatccatt aaaagaaatc 120 tttctctgag agaaaataga aacagtaaca taaaatcaca aactacacga aagttgcccc 180 ttttttatgg ggatttaccc ataagggaga tgcacagagg aagagaacga acttcatata 240 tcccttttct actcaatcaa gaaacaagat cggacgtgat tccggttcgt ctccatttta 300 gtgacactct tcctcaagca aggcagccga taagtcatcg aagggtttgt gtgaataatg 360 ggctggtaag cattactcac tttcaagttt cccacggtga tcaaatatct tttcatgaga 420 atgacgccgg tgaagaaaaa aaaataagga gatctttcta tattgacata tcagttggaa 480 aaatcatagg caaattcctg ccggtcagaa tgtggagaag aaccaaaact gaatggttcc 540 gcctactcaa aactcagagg gggtgccgcc tactactaaa atcccggttt ttgcaagagt 600 tgcgttcttc tatgcaagaa gaatacttag aaagaacaaa gaggtttgga tccgcaaaag 660 tatgcttagg cagttccttc gctgagcaca acagaatgaa gaagaatttg tttcatttca 720 aatacttctt cttattgaag agaaggaacg agaaaaaccc tactcgaaca agaaatcctt 780 ttgtttacaa gtcttcttta tatagtaatt cgacctattg ctccggatcc ccctttacta 840 ggaagataag aatcaaaagg atcgaactac ctaatcatta tccggaaata aaccatagaa 900 caccaaaagc tgtggtatct tatggaccta acata 935 // ID AY832288; SV 1; linear; genomic DNA; STD; PLN; 936 BP. XX AC AY832288; XX DT 12-JAN-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Laurus nobilis ribosomal protein S4 (rps4) gene, partial cds; DE mitochondrial. XX KW . XX OS Laurus nobilis OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Magnoliidae; Laurales; Lauraceae; Laurus. OG Mitochondrion XX RN [1] RP 1-936 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-936 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; 8fd4c258c50d042310c46307051cb3db. XX FH Key Location/Qualifiers FH FT source 1..936 FT /organism="Laurus nobilis" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:85223" FT gene <1..>936 FT /gene="rps4" FT CDS <1..>936 FT /codon_start=2 FT /gene="rps4" FT /product="ribosomal protein S4" FT /db_xref="GOA:Q5IA10" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR022801" FT /db_xref="InterPro:IPR036986" FT /db_xref="UniProtKB/TrEMBL:Q5IA10" FT /protein_id="AAW47272.1" FT /translation="TCRPLPGNVRNRELTIIQRRILRRLRNKKRSIKRKIYPRQNLNSY FT IKSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFRETIPQARQ FT PISHRRVCVNNGMVSITHLKVSHGDLISFQENYARTCGEEIRRSFYIDISVEKRIGKFL FT VRMWRRTKTEWFRLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSF FT AEHNRMKRNLYHFKFVFLSKRRNEKNRNLPTRTISPLVKNSSLYSNSTYCSGSPHQFTR FT KRRIKRIELPTHYSEVNHRTPKAVVSYGPN" XX SQ Sequence 936 BP; 328 A; 191 C; 181 G; 236 T; 0 other; aacttgtcgt ccacttccag gaaatgttcg gaacagagaa cttacaataa tacaacgccg 60 cattctccga agattgagga acaagaagag atctattaag agaaagattt atccgagaca 120 aaatctaaac agttacatca aatcacaaac tacacgaaag ttgccccttt ttcatgggga 180 tttacccatc acagagatgc acagaggaac agaacgaact tcatatatcc cttttccact 240 caatccagaa acaagatcgg acgttattcc ggttcgtctc cattttcgtg aaactattcc 300 tcaagcaagg cagccgataa gtcatcgaag ggtttgtgtg aataatggaa tggtaagcat 360 tactcatttg aaagtgtccc acggtgatct aatatctttt caagaaaatt acgcgagaac 420 ctgcggtgaa gaaataagga gatctttcta tatcgacata tcagttgaaa aaagaatagg 480 caaattcctg gtaagaatgt ggagaagaac caaaacagaa tggttccgcc tactcaaaac 540 taagaggggg tgccgcctac tactcaaatc ccggtttttg caacagttgc gttcttctat 600 gcaagaagaa gacttagaaa gaacaaagaa gtttggatcc gaaaaagtat gcttaggcag 660 ttccttcgct gagcacaaca gaatgaagag gaatttgtat catttcaaat tcgtattctt 720 atcgaagaga aggaacgaga aaaaccgaaa tcttcccact cgaacaataa gtcctttagt 780 taaaaactct tctttatata gtaattcgac ctattgctcc ggatcccccc atcagtttac 840 taggaagaga agaatcaaaa ggatcgaact acctactcat tattcggagg tgaatcatag 900 aacaccaaaa gctgtggtat cttatggacc taacat 936 // ID AY832289; SV 1; linear; genomic DNA; STD; PLN; 963 BP. XX AC AY832289; XX DT 12-JAN-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Liriodendron tulipifera ribosomal protein S4 (rps4) gene, partial cds; DE mitochondrial. XX KW . XX OS Liriodendron tulipifera OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Magnoliidae; Magnoliales; Magnoliaceae; OC Liriodendron. OG Mitochondrion XX RN [1] RP 1-963 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-963 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; f9def2dea7adbe20fea19477caafdb7a. XX FH Key Location/Qualifiers FH FT source 1..963 FT /organism="Liriodendron tulipifera" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:3415" FT gene <1..>963 FT /gene="rps4" FT CDS <1..>963 FT /codon_start=2 FT /gene="rps4" FT /product="ribosomal protein S4" FT /db_xref="GOA:Q5IA09" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR022801" FT /db_xref="InterPro:IPR036986" FT /db_xref="UniProtKB/TrEMBL:Q5IA09" FT /protein_id="AAW47273.1" FT /translation="TCRPLPGNVRNRELTIIQRRILRRLRNKKRSKKRKIYPRENLNSY FT IKSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFRETIPQARQ FT PISHRRVCVNNGMVSITHLKVSHGDLISFQENDARTCGEEIRRSFYIDISVEKIIGKFL FT PVRMWRRTKTEWFRLLKTQRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSAKVCLGSS FT FAEHNRMKRNLYHFKFIFLSKRRNEKNRNLPTRTRSPVVQNSYIYSNSTYCSGSPHQFT FT RKRRIKRKRRIKRIELPTHYSEVNHRTPKAVVSYGPNIG" XX SQ Sequence 963 BP; 341 A; 198 C; 193 G; 231 T; 0 other; aacttgtcgt ccacttccag gaaatgttcg gaacagagaa ctgacaataa tacaacgccg 60 cattctccga agattgagga acaagaagag atctaaaaag agaaagattt atccgagaga 120 aaatctaaac agttacatca aatcacaaac tacacgaaag ttgccccttt ttcatgggga 180 tttacccatc acagagatgc acagaggaac agaacgaact tcatatatcc cttttccact 240 caatccagaa acaagatcgg acgttattcc ggttcgtctc cattttcgtg aaactattcc 300 tcaagcaagg cagccgataa gtcatcgaag ggtttgtgtg aataatggaa tggtaagcat 360 tactcatttg aaagtgtccc acggtgatct aatctctttt caagaaaatg acgcgagaac 420 ctgcggtgaa gaaataagga gatctttcta tatcgacata tcagttgaaa aaatcatagg 480 caaattcctg ccggtcagaa tgtggagaag aaccaaaaca gaatggttcc gcctactcaa 540 aactcagagg gggtgccgcc tactactcaa atcccggttt ttgcaacagt tgcgttcttc 600 tatgcaagaa gaagacttag aaagaacaaa gaagtttgga tccgcaaaag tatgcttagg 660 cagttccttc gcggagcaca acagaatgaa gaggaatttg tatcatttca aattcatatt 720 cttatcgaag agaaggaacg agaaaaaccg aaatcttcct actcgaacaa gaagtcctgt 780 agttcaaaac tcatatatat atagtaattc gacctattgc tccggatccc cccatcagtt 840 tactaggaag agaagaatca aaaggaagag aagaatcaaa aggatcgaac tacctactca 900 ttattcggag gtgaatcata gaacaccaaa agctgtggta tcttatggac ctaacatagg 960 tca 963 // ID AY832290; SV 1; linear; genomic DNA; STD; PLN; 814 BP. XX AC AY832290; XX DT 12-JAN-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Philodendron oxycardium ribosomal protein S4 (rps4) gene, partial cds; DE mitochondrial. XX KW . XX OS Philodendron hederaceum var. oxycardium OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Araceae; Philodendroideae; OC Philodendreae; Philodendron. OG Mitochondrion XX RN [1] RP 1-814 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-814 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; f2c0aeb009c9cf66a6182c6ef1c64b4a. XX FH Key Location/Qualifiers FH FT source 1..814 FT /organism="Philodendron hederaceum var. oxycardium" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:71614" FT gene <1..>814 FT /gene="rps4" FT CDS <1..>814 FT /codon_start=1 FT /gene="rps4" FT /product="ribosomal protein S4" FT /db_xref="GOA:Q5IA08" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR022801" FT /db_xref="InterPro:IPR036986" FT /db_xref="UniProtKB/TrEMBL:Q5IA08" FT /protein_id="AAW47274.1" FT /translation="KKRSXMINLSQRENLNSYIKSQTTRKLPLFHGSITEMHRGTEQTS FT YIPLQLNPETRSDVIPVRLHFRETISQARQPISHRRLCVNNGIVSMTHFKVSHGDLISF FT QENDARTCGEKIRRSFYIDISVDKIIGACAHPVRMWRRXKTEWFRLLKTKRGGRXXXKS FT RFLQELRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNFYHFKYLFLSKRRNEKNL FT NLPTRTKSPFVYKSSLYSNSTYCSGSPHQFTRKRRIKRIELPTHYSEVN" XX SQ Sequence 814 BP; 277 A; 158 C; 157 G; 210 T; 12 other; aagaagagat ccnttatgat aaatctttcg cagagagaaa atctaaacag ttacatcaaa 60 tcacaaacta cacgaaagtt gccccttttt catggttcca tcacagagat gcacagagga 120 acagaacaaa cttcatatat acctttacaa ctcaatccag aaacaagatc ggacgttatt 180 ccggttcgtc tccattttcg tgaaactatt agtcaagcaa ggcagccgat aagtcatcga 240 aggctttgtg tgaataatgg aattgtaagc atgactcatt ttaaagtgtc ccacggtgat 300 ctaatatctt ttcaagaaaa tgacgcgaga acctgcggtg aaaaaataag gagatctttc 360 tatatcgaca tatcagttga taaaatcata ggcgcttgcg cccacccggt aagaatgtgg 420 agaagancca aaactgaatg gttccgccta ctcaaaacta agaggggggg ccgcnnnnnn 480 nnnaaatccc ggtttttgca agagttgcgt tcttctatgc aagaagaaga cttagaaaga 540 acaaagaagt ttggatccga aaaagtatgc ttaggcagtt ccttcgctga gcacaacaga 600 atgaagagga atttttatca tttcaaatac ttattcttat cgaagagaag gaacgagaaa 660 aacctaaatc ttcctactcg aacaaaaagt ccttttgttt ataagtcttc cttatatagt 720 aattcgacnt attgctctgg gtccccccat cagtttacta ggaagagaag aataaaaagg 780 atcgaactac ctactcatta ttcggaggtg aatc 814 // ID AY832291; SV 1; linear; genomic DNA; STD; PLN; 982 BP. XX AC AY832291; XX DT 12-JAN-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Piper betle ribosomal protein S4 (rps4) gene, partial cds; mitochondrial. XX KW . XX OS Piper betle OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Magnoliidae; Piperales; Piperaceae; Piper. OG Mitochondrion XX RN [1] RP 1-982 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-982 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; 58842ebcd151c70b372da71067639bf0. XX FH Key Location/Qualifiers FH FT source 1..982 FT /organism="Piper betle" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:13217" FT gene <1..>982 FT /gene="rps4" FT CDS <1..>982 FT /codon_start=3 FT /gene="rps4" FT /product="ribosomal protein S4" FT /db_xref="GOA:Q5IA07" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR022801" FT /db_xref="InterPro:IPR036986" FT /db_xref="UniProtKB/TrEMBL:Q5IA07" FT /protein_id="AAW47275.1" FT /translation="TCRLLSGNVRNRELTIIQRRILRRLRNKRRSIKRRIYSRKNLNSY FT IKSQTTRKLPLFYGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFRETLPQARQ FT PISHRRVCVNNGMVSITHLKVSHGDLISFQENEARTGGEEIRRSFYIDISIENIIGKFL FT DHPVRMWRRTKTEWFRLLKTKRGCHLLLKSRFLQQLRSSMQKEDLERTKKFGSAKVCLG FT SSFAEHNRMKRNLYHFQFIFLSKRRNEKNRYLPTRTRSPLVKNFSSLYSNSTYCSGSPN FT LLTRKSRMKRRTRKSRMKRIELPTHYSEVNHRTPKAVVSYGPNIG" XX SQ Sequence 982 BP; 345 A; 189 C; 196 G; 252 T; 0 other; aaacttgtcg tctactttca ggaaatgttc ggaacagaga acttacaata atacaacgcc 60 gcattctccg aagattgagg aacaagagga gatctattaa gagaaggatt tattcgagaa 120 aaaatcttaa cagttacatc aaatcacaaa ctacacgaaa gttgcccctt ttttatgggg 180 atttacccat cacagagatg cacagaggaa cagaacgaac ttcatatatc ccttttccac 240 tcaatccaga aactagatcg gacgttattc cggttcgtct ccattttcgt gaaactcttc 300 ctcaagcaag gcagccgata agtcatcgaa gggtttgtgt gaataatgga atggtaagca 360 ttactcattt gaaagtgtcc cacggtgatc taatatcttt tcaagaaaat gaggcgagaa 420 caggcggtga agaaatcagg agatctttct atatcgacat atcaattgag aatattatag 480 ggaaattcct ggatcacccg gtaagaatgt ggagaagaac caaaacggaa tggttccgcc 540 tactaaaaac taagaggggg tgccacctac tactcaaatc ccgatttttg caacagttgc 600 gttcttctat gcaaaaagaa gacttagaaa gaacaaagaa gtttggatcc gcaaaagtat 660 gcttaggcag ttccttcgct gagcacaaca gaatgaagag gaatttgtat catttccaat 720 ttatattctt atcgaagaga aggaacgaga aaaaccgata tcttcctact cgaacaagaa 780 gtcctttagt taaaaacttt tcttctttat atagtaattc gacctattgc tcaggatccc 840 ccaatctgtt aactaggaaa agcagaatga aaaggagaac taggaaaagc agaatgaaaa 900 ggatcgaact acctactcat tattcggagg tgaatcatag aacaccaaaa gctgtggtat 960 cttatggacc taacataggt ca 982 // ID AY832292; SV 1; linear; genomic DNA; STD; PLN; 961 BP. XX AC AY832292; XX DT 12-JAN-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Platanus occidentalis ribosomal protein S4 (rps4) gene, partial cds; DE mitochondrial. XX KW . XX OS Platanus occidentalis OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Proteales; Platanaceae; Platanus. OG Mitochondrion XX RN [1] RP 1-961 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-961 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; 0fd7d4dd50b3cee2fbb5db39b438d5f7. XX FH Key Location/Qualifiers FH FT source 1..961 FT /organism="Platanus occidentalis" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:4403" FT gene <1..>961 FT /gene="rps4" FT CDS <1..>961 FT /codon_start=3 FT /gene="rps4" FT /product="ribosomal protein S4" FT /db_xref="GOA:Q5IA06" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR022801" FT /db_xref="InterPro:IPR036986" FT /db_xref="UniProtKB/TrEMBL:Q5IA06" FT /protein_id="AAW47276.1" FT /translation="LRFKTCRPLSGNVRNRELTIIQRRILRRLRSKKRSIKRKIYPREN FT LNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFRETIP FT QARQPISHRRVCVNNGMVSITHLKVSHGDLISFQENDARTRGEEIRRSFYIDISVEKII FT GKFLDHPVRMWRRTKTEWFRLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEK FT VCLGSSFAEHNRMKRNLYHFKSLFLSKRRNEKNLNLPTRTRSPIVNNSSLYSNSTYCSG FT SPHQFTRKRRIKRIELPTHYSEVNHRTPKAVVSYGPNIG" XX SQ Sequence 961 BP; 335 A; 196 C; 187 G; 243 T; 0 other; cattaagatt taaaacttgt cgtccacttt caggaaatgt tcggaacaga gaacttacaa 60 taatacaacg ccgcattctc cgaagattga ggagcaagaa gagatctatt aagagaaaga 120 tttatccgag agaaaatctt aacagttaca tccaatcaca aactacacga aagttgcccc 180 tttttcatgg ggatttaccc atcacagaga tgcacagagg aacagaacga acttcatata 240 tcccttttcc actcaatcca gaaacaagat cggacgttat tccggttcgt ctccattttc 300 gtgaaactat tcctcaagca aggcagccga taagtcatcg aagggtttgt gtgaataatg 360 gaatggtaag cattactcat ttgaaagtgt cccacggtga tctaatatct tttcaagaaa 420 atgacgcgag aacccgcggt gaagaaataa ggagatcttt ctatatcgac atatcagttg 480 aaaaaataat aggcaaattc ctggatcacc cggtaagaat gtggagaaga accaaaacag 540 aatggttccg cctactcaaa actaagaggg ggtgccgctt actactaaaa tcccggtttt 600 tgcaacagtt gcgttcttct atgcaagaag aagacttaga aagaacaaag aagtttggat 660 ccgaaaaagt atgcttaggc agttccttcg ctgagcacaa cagaatgaag aggaatttgt 720 atcatttcaa atccctattc ttatcgaaga gaaggaacga gaaaaaccta aatcttccta 780 ctcgaacaag aagtcctata gttaacaact cttctttata tagtaattcg acctattgct 840 ccggatcccc ccatcagttt actaggaaga gaagaatcaa aaggatcgaa ctacctactc 900 attattcgga ggtgaatcat agaacaccaa aagctgtggt atcttatgga cctaacatag 960 g 961 // ID AY832293; SV 1; linear; genomic DNA; STD; PLN; 959 BP. XX AC AY832293; XX DT 12-JAN-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Eschscholzia californica ribosomal protein S4 (rps4) gene, partial cds; DE mitochondrial. XX KW . XX OS Eschscholzia californica (California poppy) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Ranunculales; Papaveraceae; OC Eschscholzioideae; Eschscholzia. OG Mitochondrion XX RN [1] RP 1-959 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-959 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; 55f6a13eb4dbde2227e3ce187a0c7f41. XX FH Key Location/Qualifiers FH FT source 1..959 FT /organism="Eschscholzia californica" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:3467" FT gene <1..>959 FT /gene="rps4" FT CDS <1..>959 FT /codon_start=3 FT /gene="rps4" FT /product="ribosomal protein S4" FT /db_xref="GOA:Q5IA05" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR022801" FT /db_xref="InterPro:IPR036986" FT /db_xref="UniProtKB/TrEMBL:Q5IA05" FT /protein_id="AAW47277.1" FT /translation="LRFQTCRLLPGNVRNRELTIIQRRILRRLRNRKRSIKRKIYPREN FT LNSYIQSQTTRKLPLFHGDLPITEMHRRTERTSYIPFPLNPETRSDVIPVRLHFRETIP FT QARQPISHRRVCVNNGMVSITHWKVCYGDLISFQENDARTRGEEIRRSFYIDISVEKII FT GKFLAHPVRMWRRTKTEWFRLLKTKRGCRXLLKSRFLQQLRSSMQEEDLERTKKFGSEK FT VCLGSYFAEHNRMKRNLYHFKSLFLSKRRNEKNRNLPTRTRSPIVNNSSLYSNSTYCSG FT SPHQFTRKRRIKRIELPTHYSEVNHRTPKAVVSYGPNI" XX SQ Sequence 959 BP; 334 A; 196 C; 186 G; 241 T; 2 other; cattaagatt tcaaacntgt cgtctacttc caggaaatgt tcggaacaga gaacttacaa 60 taatacaacg ccgcattctc cgaagattga ggaacaggaa gagatccatt aagagaaaga 120 tttatccgag agaaaatctt aacagttaca tccaatcaca aactacacga aagttgcccc 180 tttttcatgg ggatttaccc atcacagaga tgcacagaag aacagaacga acttcatata 240 tcccttttcc actcaatcca gaaacaagat cggacgttat tccggttcgt ctccattttc 300 gtgaaactat tcctcaagca aggcagccga taagtcatcg aagggtttgt gtgaataatg 360 gaatggtaag cattactcat tggaaagtgt gctacggtga tcttatatct tttcaagaaa 420 atgacgcgag aacccgcggt gaagaaataa ggagatcttt ctatatcgac atatcagttg 480 aaaaaatcat aggcaaattt ctggctcacc cggtaagaat gtggagaaga accaaaacag 540 aatggttccg cctactcaaa actaagaggg ggtgccgcnt actactaaaa tcccggtttt 600 tgcaacagtt gcgttcttct atgcaagaag aagacttaga aagaacaaag aagtttggat 660 ccgaaaaagt atgcttaggc agttacttcg ctgagcacaa cagaatgaag agaaatttgt 720 atcatttcaa atccctattc ttatcgaaga gaaggaacga gaaaaaccga aatcttccta 780 ctcgaacaag aagtcctata gttaacaact cttctttata tagtaattcg acctattgct 840 ccggatcccc ccatcagttt actaggaaga gaagaatcaa aaggatcgaa ctacctactc 900 attattcgga ggtgaatcat agaacaccaa aagctgtggt atcttatgga cctaacata 959 // ID AY832294; SV 1; linear; genomic DNA; STD; PLN; 956 BP. XX AC AY832294; XX DT 12-JAN-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Lonicera sp. Bergthorsson 0301 ribosomal protein S4 (rps4) gene, partial DE cds; mitochondrial. XX KW . XX OS Lonicera sp. Bergthorsson 0301 OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC asterids; campanulids; Dipsacales; Caprifoliaceae; Lonicera; OC unclassified Lonicera. OG Mitochondrion XX RN [1] RP 1-956 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-956 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; 452acb003acd9cfda75badef5b9b619c. XX FH Key Location/Qualifiers FH FT source 1..956 FT /organism="Lonicera sp. Bergthorsson 0301" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:232617" FT gene <1..>956 FT /gene="rps4" FT CDS <1..>956 FT /codon_start=3 FT /gene="rps4" FT /product="ribosomal protein S4" FT /db_xref="GOA:Q5IA04" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR022801" FT /db_xref="InterPro:IPR036986" FT /db_xref="UniProtKB/TrEMBL:Q5IA04" FT /protein_id="AAW47278.1" FT /translation="CRLLSGNVWNRELTIIQRRILRRLRNKKRSIKRKIYSRENLNSYI FT QSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFRETIPQARQP FT ISHRRVCVNNGMVSITHFKVSHGDLISFQENDARTPNCLGEEIRRSFYIEISVEKIIGK FT FLDHPVRMWRRTKTEWFRLLKTKRGCRLLLKSRFLKQLRSSMQEEDLERTKKFGSEKVC FT LGSSFAEHNRMKRNLYHFKSIFLSKRRNEKNRNLPTRTRSPIVYNSSLFSNSTYCSASP FT HQLTMKRKVKRIELPTHYSEVNHRTPKAVVSYGPNIG" XX SQ Sequence 956 BP; 336 A; 189 C; 183 G; 248 T; 0 other; cgtgtcgtct actttcagga aatgtttgga acagagaact tacaataata caacgccgca 60 ttctccgaag attgaggaac aagaagagat ctattaagag aaagatttat tcgagagaaa 120 atcttaacag ttacatccaa tcacaaacta cacgaaagtt gccccttttt catggagatt 180 tacccatcac agagatgcac agaggaacag aacgaacttc atatatccct tttccactca 240 atccagaaac aagatcggac gttattccgg ttcgtctcca ttttcgtgaa actattcctc 300 aagcaaggca gccgataagt catcgaaggg tttgtgtgaa taatggaatg gtaagcatta 360 ctcattttaa agtttcccac ggtgatctaa tatcttttca agaaaatgat gcgagaaccc 420 ccaattgttt aggggaagaa ataaggagat ccttctatat cgaaatatca gttgaaaaaa 480 taataggaaa attcctggat cacccggtaa gaatgtggag aagaaccaaa acagaatggt 540 tccgcctact caaaactaag aggggatgcc gcctactact aaaatcccgg tttttgaaac 600 agttgcgttc ttctatgcaa gaagaagact tagaaagaac aaagaagttt ggatccgaaa 660 aagtatgctt aggcagttct ttcgctgagc acaacagaat gaagaggaat ttgtatcatt 720 tcaaatccat attcttatcg aagagaagga acgagaaaaa ccgaaatctt cctactcgaa 780 caagaagtcc tatagtttac aactcttctt tatttagtaa ttcgacctat tgctccgcat 840 ccccccatca gttgactatg aagagaaaag taaaaaggat cgaactacct actcattatt 900 cggaggtgaa tcatagaaca ccaaaagctg tggtatctta tggacctaac ataggt 956 // ID AY832295; SV 1; linear; genomic DNA; STD; PLN; 965 BP. XX AC AY832295; XX DT 12-JAN-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Amborella trichopoda ribosomal protein S4 (rps4) gene, partial cds; DE mitochondrial. XX KW . XX OS Amborella trichopoda OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella. OG Mitochondrion XX RN [1] RP 1-965 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-965 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; df4fb35a75ccfce50dd6dd06601320bd. XX FH Key Location/Qualifiers FH FT source 1..965 FT /organism="Amborella trichopoda" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:13333" FT gene <1..>965 FT /gene="rps4" FT CDS <1..>965 FT /codon_start=3 FT /gene="rps4" FT /product="ribosomal protein S4" FT /db_xref="GOA:Q5IA03" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR022801" FT /db_xref="InterPro:IPR036986" FT /db_xref="UniProtKB/TrEMBL:Q5IA03" FT /protein_id="AAW47279.1" FT /translation="LRFQTCRPLPGNVRNRELTIIQRRILRRLRNKKRSIKRKISPRKN FT LNSYIKLQTTRKLSLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFRETLP FT QARQPISHRRLCVNNGMVSITRLKVSHGDLISLKENYARTRGEERRRSFYIEISVEKMI FT GKFLDHPVRMWRRTKTEWFRLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTNPFGVCL FT GSSFAEHNRMKRNSYHFKSLFLSKRRKEKNREIPTRTRSPIVNNGNLYSNSTYCSGSPH FT RFTRKRRIKRIELPTHYSEVNHRTPKAVVSYGPNIGHIPH" XX SQ Sequence 965 BP; 332 A; 199 C; 192 G; 242 T; 0 other; cattaagatt tcaaacttgt cgtccacttc caggaaatgt tcggaacaga gaacttacaa 60 taatacaacg ccgcattctc cgaagattga ggaacaagaa gagatctatt aagagaaaga 120 tttctccgag aaaaaatctt aacagttaca tcaaattaca aactacacga aagttgtccc 180 tttttcatgg ggatttaccc atcacagaga tgcacagagg aacagaacga acttcatata 240 tcccttttcc actcaatcca gaaacaagat cggacgttat tccggttcgt ctccattttc 300 gtgaaactct tcctcaagca aggcagccga taagtcatcg aaggctttgt gtgaataatg 360 gaatggtaag cattactcgt ttgaaagtgt cccacggtga tctaatatct ttgaaagaaa 420 attacgcgag aaccaggggg gaagaaagaa ggagatcttt ctatatcgaa atatcagttg 480 aaaaaatgat aggcaaattc ctggatcacc cggtaagaat gtggagaaga acaaaaacag 540 aatggttccg cctactcaaa actaagaggg ggtgccgcct cctactaaaa tcccggtttt 600 tgcaacagtt gcgttcttct atgcaagaag aagacttaga aagaacaaat ccttttggag 660 tatgcttagg cagttccttc gctgagcaca acagaatgaa gaggaattcg tatcatttca 720 aatccctatt cctatcgaag agaaggaagg agaaaaaccg agagattcct actcgaacaa 780 gaagtcctat tgttaataac ggtaatttat atagtaattc gacctattgc tccggatccc 840 cccatcggtt tactaggaag agaagaatca aaaggatcga actacctact cattattcgg 900 aggttaatca tagaacacca aaagctgtgg tatcttatgg acctaacata ggtcacatcc 960 ctcac 965 // ID AY832296; SV 1; linear; genomic DNA; STD; PLN; 414 BP. XX AC AY832296; XX DT 24-DEC-2004 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Eichhornia crassipes ribosomal protein S7 (rps7) gene, partial cds; DE mitochondrial. XX KW . XX OS Eichhornia crassipes (water hyacinth) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Commelinales; Pontederiaceae; OC Eichhornia. OG Mitochondrion XX RN [1] RP 1-414 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-414 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; 9cb120be9a7e2758222cf7b507d38623. XX FH Key Location/Qualifiers FH FT source 1..414 FT /organism="Eichhornia crassipes" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:44947" FT gene <1..>414 FT /gene="rps7" FT CDS <1..>414 FT /codon_start=2 FT /gene="rps7" FT /product="ribosomal protein S7" FT /db_xref="GOA:Q5MEZ2" FT /db_xref="InterPro:IPR000235" FT /db_xref="InterPro:IPR023798" FT /db_xref="InterPro:IPR036823" FT /db_xref="UniProtKB/TrEMBL:Q5MEZ2" FT /protein_id="AAW28840.1" FT /translation="QKQLIKKLVNFRMIDGKRTRVRAIVYKTFHRPARTERDVIKLMVD FT AVENIKPICEVVKVGVAGTIYDVPGIVARDRQQTLAIRWILGAAFKRRISYRISLEKCS FT FAEILDAYRRRGIARKRRENLHGLASTNRSFAH" XX SQ Sequence 414 BP; 128 A; 75 C; 104 G; 107 T; 0 other; gcaaaaacaa ttgatcaaga agttggtaaa ctttcgcatg atcgatggta aaagaacgag 60 agttcgtgct attgtttata aaacttttca tcgcccagct cgaactgaac gcgatgtaat 120 caaactgatg gttgacgccg tagagaatat aaagccaata tgcgaagtgg taaaagtagg 180 agtcgccggt actatttatg atgtccctgg gattgtagcc agggatcgtc aacaaacctt 240 agctattcgt tggatccttg gagcagcttt caaacgacgt ataagctaca ggataagctt 300 agagaaatgt tcatttgcgg agatactgga tgcttaccga aggaggggaa ttgcacgtaa 360 gagaagggag aatcttcatg gactggcttc caccaatcga agtttcgcgc attt 414 // ID AY832297; SV 1; linear; genomic DNA; STD; PLN; 416 BP. XX AC AY832297; XX DT 24-DEC-2004 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Lonicera sp. Bergthorsson 0301 ribosomal protein S7 (rps7) gene, partial DE cds; mitochondrial. XX KW . XX OS Lonicera sp. Bergthorsson 0301 OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC asterids; campanulids; Dipsacales; Caprifoliaceae; Lonicera; OC unclassified Lonicera. OG Mitochondrion XX RN [1] RP 1-416 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-416 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; 4dd4bd968e3ec8b608651e811b27490b. XX FH Key Location/Qualifiers FH FT source 1..416 FT /organism="Lonicera sp. Bergthorsson 0301" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:232617" FT gene <1..>416 FT /gene="rps7" FT CDS <1..>416 FT /codon_start=3 FT /gene="rps7" FT /product="ribosomal protein S7" FT /db_xref="GOA:Q5MEZ1" FT /db_xref="InterPro:IPR000235" FT /db_xref="InterPro:IPR005717" FT /db_xref="InterPro:IPR023798" FT /db_xref="InterPro:IPR034643" FT /db_xref="InterPro:IPR036823" FT /db_xref="UniProtKB/TrEMBL:Q5MEZ1" FT /protein_id="AAW28841.1" FT /translation="QKQLLKKLVNFRMKEGQKTRVHAIVYQTFNRPARTERDVIKLMVD FT ALENIKPICEVEKVGIAGTTYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCS FT FDEILDAYRKRGIARKKRENLHGLASTNRSFAHF" XX SQ Sequence 416 BP; 139 A; 78 C; 95 G; 104 T; 0 other; agcaaaaaca attgctcaag aagttggtca actttcgcat gaaagaaggg caaaaaacaa 60 gagttcatgc tattgtttat caaactttta atcgcccagc tcgaactgaa cgcgatgtaa 120 tcaaacttat ggttgacgcc ctagagaata taaagcccat atgcgaagtg gaaaaagtag 180 gaatagcagg tactacttat gatgtccctg ggattgtagc cagggatcgt caacaaacct 240 tagctattcg ttggatcctt gaagcagctt tcaaacgacg tataagctac aggataagct 300 tagagaaatg ttcatttgat gagatactgg atgcttaccg aaagagggga attgcacgta 360 agaaaaggga gaatcttcat ggactggctt ccaccaatcg aagtttcgcg catttc 416 // ID AY832298; SV 1; linear; genomic DNA; STD; PLN; 416 BP. XX AC AY832298; XX DT 24-DEC-2004 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Mahonia bealei ribosomal protein S7 (rps7) gene, partial cds; DE mitochondrial. XX KW . XX OS Berberis bealei OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Ranunculales; Berberidaceae; Berberidoideae; OC Berberis. OG Mitochondrion XX RN [1] RP 1-416 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-416 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; 44b797cfa9761bd0d25583ddcd50f970. XX FH Key Location/Qualifiers FH FT source 1..416 FT /organism="Berberis bealei" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:13601" FT gene <1..>416 FT /gene="rps7" FT CDS <1..>416 FT /codon_start=3 FT /gene="rps7" FT /product="ribosomal protein S7" FT /db_xref="GOA:Q5MEZ0" FT /db_xref="InterPro:IPR000235" FT /db_xref="InterPro:IPR023798" FT /db_xref="InterPro:IPR034643" FT /db_xref="InterPro:IPR036823" FT /db_xref="UniProtKB/TrEMBL:Q5MEZ0" FT /protein_id="AAW28842.1" FT /translation="QKQLIKKLVNFRMKEGKRTRVRAIVFQTFHRPARTERDVIKLMVD FT AVENIKPICEVEKVGVAGTFYDVPGIVARDRQQTLAIRWILGAAFKRRKSYRISLEKCS FT FDEILDAYRKRGIARKKRENLHGLASTNRSFAHF" XX SQ Sequence 416 BP; 134 A; 75 C; 100 G; 107 T; 0 other; agcaaaaaca attgatcaag aagttggtaa actttcgcat gaaagaaggt aaaagaacga 60 gagttcgtgc tattgttttt caaacttttc atcgcccagc tcgaactgaa cgcgatgtaa 120 tcaaacttat ggttgacgcc gtagagaata taaagcccat atgcgaagtg gaaaaagtag 180 gagtcgcagg tactttttat gatgtccctg ggattgtagc cagggatcgt caacaaacct 240 tagctattcg ttggatcctt ggagcagctt tcaaacgacg taaaagctac aggataagct 300 tagagaaatg ttcatttgat gagatactgg atgcttaccg aaagagggga attgcacgta 360 agaaaaggga gaatcttcat ggactggctt ccaccaatcg aagtttcgcg catttc 416 // ID AY832299; SV 1; linear; genomic DNA; STD; PLN; 416 BP. XX AC AY832299; XX DT 24-DEC-2004 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Nymphaea sp. Bergthorsson 0401 ribosomal protein S7 (rps7) gene, partial DE cds; mitochondrial. XX KW . XX OS Nymphaea sp. Bergthorsson 0401 OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Nymphaeales; Nymphaeaceae; Nymphaea. OG Mitochondrion XX RN [1] RP 1-416 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-416 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; c9dee66848f09ea002d67a428b0cfc38. XX FH Key Location/Qualifiers FH FT source 1..416 FT /organism="Nymphaea sp. Bergthorsson 0401" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:304875" FT gene <1..>416 FT /gene="rps7" FT CDS <1..>416 FT /codon_start=3 FT /gene="rps7" FT /product="ribosomal protein S7" FT /db_xref="GOA:Q5MEY9" FT /db_xref="InterPro:IPR000235" FT /db_xref="InterPro:IPR005717" FT /db_xref="InterPro:IPR023798" FT /db_xref="InterPro:IPR034643" FT /db_xref="InterPro:IPR036823" FT /db_xref="UniProtKB/TrEMBL:Q5MEY9" FT /protein_id="AAW28843.1" FT /translation="QKQLIKKLVNFRMKDGKRTRVRASVYQTFHRPARTERDVIKLMVD FT AVENIKPICEVEKVGVAGTTYDVPGIVARDRQQTLAIRWILEAAFKRRINHNISFDKCS FT FSEIVDAYRKRGIARKKRENLHGLASTNRSFAHF" XX SQ Sequence 416 BP; 131 A; 79 C; 99 G; 107 T; 0 other; agcaaaaaca attgatcaag aagttggtca actttcgcat gaaagatggt aaaagaacga 60 gagttcgtgc gtcagtttat caaacttttc atcgccctgc tcgaacggaa cgtgatgtaa 120 tcaaactgat ggttgacgcc gtagagaata tcaagcccat atgcgaagtg gaaaaagtag 180 gagtcgcagg tacaacttat gatgtccctg ggattgttgc cagggatcgt caacaaacct 240 tagctattcg ttggatcctt gaagctgctt tcaaacgacg tataaaccac aatataagct 300 ttgataaatg ttcattttcg gagatagtgg atgcttaccg aaagagggga attgcacgta 360 agaaaaggga gaatcttcat ggactggctt ccaccaatcg aagtttcgcg catttc 416 // ID AY832300; SV 1; linear; genomic DNA; STD; PLN; 418 BP. XX AC AY832300; XX DT 24-DEC-2004 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Eschscholzia californica ribosomal protein S7 (rps7) gene, partial cds; DE mitochondrial. XX KW . XX OS Eschscholzia californica (California poppy) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Ranunculales; Papaveraceae; OC Eschscholzioideae; Eschscholzia. OG Mitochondrion XX RN [1] RP 1-418 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-418 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; 2066f9efb6f2e306d9f0faf70526333a. XX FH Key Location/Qualifiers FH FT source 1..418 FT /organism="Eschscholzia californica" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:3467" FT gene <1..>418 FT /gene="rps7" FT CDS <1..>418 FT /codon_start=1 FT /gene="rps7" FT /product="ribosomal protein S7" FT /db_xref="GOA:Q5MEY8" FT /db_xref="InterPro:IPR000235" FT /db_xref="InterPro:IPR005717" FT /db_xref="InterPro:IPR023798" FT /db_xref="InterPro:IPR034643" FT /db_xref="InterPro:IPR036823" FT /db_xref="UniProtKB/TrEMBL:Q5MEY8" FT /protein_id="AAW28844.1" FT /translation="EQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMV FT DAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILGAAFKRHRSGRISLEEC FT SFVEILNAYRKSGSARKKREDLHGLASTNRSFAHF" XX SQ Sequence 418 BP; 133 A; 77 C; 104 G; 104 T; 0 other; gagcaaaaac aattgatcaa gaagttggtc aactttcgca tgaaagaagg taaaagaacg 60 agagttcgtg ctattgttta tcaaactttt catcgcccag ctcgaactga acgcgatgta 120 atcaaactta tggttgacgc cgtagagaat ataaagccca tatgcgaagt ggaaaaagta 180 ggagtcgcag gtactattta tgatgtccct gggattgtag ccagggatcg tcaacaaacc 240 ttagctattc gttggatcct tggagcagct ttcaaacgac atagaagcgg caggataagc 300 ttagaggaat gttcatttgt tgagatactg aatgcttacc gaaagagcgg aagtgcacgt 360 aagaaaaggg aggatcttca tggactggct tccaccaatc gaagtttcgc gcatttca 418 // ID AY832301; SV 1; linear; genomic DNA; STD; PLN; 350 BP. XX AC AY832301; XX DT 24-DEC-2004 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Laurus nobilis ribosomal protein S7 (rps7) gene, partial cds; DE mitochondrial. XX KW . XX OS Laurus nobilis OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Magnoliidae; Laurales; Lauraceae; Laurus. OG Mitochondrion XX RN [1] RP 1-350 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-350 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; ec3584f5dfbf8cb0b9778f9c5530ad59. XX FH Key Location/Qualifiers FH FT source 1..350 FT /organism="Laurus nobilis" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:85223" FT gene <1..>350 FT /gene="rps7" FT CDS <1..>350 FT /codon_start=2 FT /gene="rps7" FT /product="ribosomal protein S7" FT /db_xref="GOA:Q5MEY7" FT /db_xref="InterPro:IPR000235" FT /db_xref="InterPro:IPR023798" FT /db_xref="InterPro:IPR036823" FT /db_xref="UniProtKB/TrEMBL:Q5MEY7" FT /protein_id="AAW28845.1" FT /translation="MXDGKXTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPICEVE FT KVGVAGTIYDVPGIVARDRQQTLAIRWILGAAFKRRISQRRRSLEKCSSIEILDAYRKR FT GIARKKREHLHG" XX SQ Sequence 350 BP; 111 A; 61 C; 88 G; 87 T; 3 other; catgatngat ggtaaangaa cgagagttcg tgctattgtt tatcaaactt ttcatcgncc 60 agctcgaact gaacgcgatg taatcaaact tatggttgac gccgtagaga atataaagcc 120 catatgcgaa gtggaaaaag taggagtcgc aggtactatt tatgatgtcc ctgggattgt 180 agccagggat cgtcaacaaa ccttagctat tcgttggatc cttggagcag ctttcaaacg 240 acgtataagc caaaggagaa gaagcttaga gaaatgttca tctattgaga tactggatgc 300 ttaccgaaag aggggaattg cacgtaagaa aagggagcat cttcatggac 350 // ID AY832302; SV 1; linear; genomic DNA; STD; PLN; 421 BP. XX AC AY832302; XX DT 24-DEC-2004 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Calycanthus floridus ribosomal protein S7 (rps7) gene, partial cds; DE mitochondrial. XX KW . XX OS Calycanthus floridus OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Magnoliidae; Laurales; Calycanthaceae; OC Calycanthus. OG Mitochondrion XX RN [1] RP 1-421 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-421 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; b1cdd78d654fe5b993f4ecc4075490e1. XX FH Key Location/Qualifiers FH FT source 1..421 FT /organism="Calycanthus floridus" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:3429" FT gene <1..>421 FT /gene="rps7" FT CDS <1..>421 FT /codon_start=2 FT /gene="rps7" FT /product="ribosomal protein S7" FT /db_xref="GOA:Q5MEY6" FT /db_xref="InterPro:IPR000235" FT /db_xref="InterPro:IPR005717" FT /db_xref="InterPro:IPR023798" FT /db_xref="InterPro:IPR036823" FT /db_xref="UniProtKB/TrEMBL:Q5MEY6" FT /protein_id="AAW28846.1" FT /translation="EQKQLIKKLVNFRMIDGKRTRVRAIVYQTFHRPARTERDVIKLMV FT DAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILGAAFKRRISQRKRSLEK FT CSSIEILDAYRKRGIARKKRENLHGLASTNRSFAHF" XX SQ Sequence 421 BP; 135 A; 78 C; 101 G; 107 T; 0 other; tgagcaaaaa caattgatca agaagttggt caactttcgc atgatcgatg gtaaaagaac 60 gagagttcgt gctattgttt atcaaacttt tcatcgccca gctcgaactg aacgcgatgt 120 aatcaaactt atggttgacg ccgtagagaa tataaagccc atatgcgaag tggaaaaagt 180 aggagtcgca ggtactattt atgatgtccc tgggattgta gccagggatc gtcaacaaac 240 cttagctatt cgttggatcc ttggagcagc tttcaaacga cgtataagcc aaaggaaaag 300 aagcttagag aaatgttcat ctattgagat actggatgct taccgaaaga ggggaattgc 360 acgtaagaaa agggagaatc ttcatggact ggcttccacc aatcgaagtt tcgcgcattt 420 c 421 // ID AY832303; SV 1; linear; genomic DNA; STD; PLN; 420 BP. XX AC AY832303; XX DT 24-DEC-2004 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Liriodendron tulipifera ribosomal protein S7 (rps7) gene, partial cds; DE mitochondrial. XX KW . XX OS Liriodendron tulipifera OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Magnoliidae; Magnoliales; Magnoliaceae; OC Liriodendron. OG Mitochondrion XX RN [1] RP 1-420 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-420 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; 9d52e7d57240888323641acd5d132536. XX FH Key Location/Qualifiers FH FT source 1..420 FT /organism="Liriodendron tulipifera" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:3415" FT gene <1..>420 FT /gene="rps7" FT CDS <1..>420 FT /codon_start=2 FT /gene="rps7" FT /product="ribosomal protein S7" FT /db_xref="GOA:Q5MEY5" FT /db_xref="InterPro:IPR000235" FT /db_xref="InterPro:IPR023798" FT /db_xref="InterPro:IPR034643" FT /db_xref="InterPro:IPR036823" FT /db_xref="UniProtKB/TrEMBL:Q5MEY5" FT /protein_id="AAW28847.1" FT /translation="EQKQLIKKLVNFRMIDGKRTRVRAIVYQTFHRPARTERDVIKLMV FT DAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILGAAVKRRISYRKSSLEK FT CSFAEILDAYRKRGIARQKRENLHGLASTNRSFAH" XX SQ Sequence 420 BP; 132 A; 79 C; 103 G; 106 T; 0 other; agagcaaaaa caattgatca agaagttggt caactttcgc atgatcgatg gtaaaagaac 60 gagagttcgt gctattgttt atcaaacttt tcatcgccca gctcgaactg aacgcgatgt 120 aatcaaactt atggttgacg ccgtagagaa tataaagccc atatgcgaag tggaaaaagt 180 aggagtcgca ggtactattt atgatgtccc tgggattgta gccagggatc gtcaacaaac 240 cttagctatt cgttggatcc ttggagcagc tgtcaaacga cgtataagct acaggaaaag 300 cagcttagag aaatgttcat ttgctgagat actggatgct taccgaaaga ggggaattgc 360 acgtcagaaa agggagaatc ttcatggact ggcttccacc aatcgaagtt tcgcgcattt 420 // ID AY832304; SV 1; linear; genomic DNA; STD; PLN; 415 BP. XX AC AY832304; XX DT 24-DEC-2004 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Piper betle ribosomal protein S7 (rps7) gene, partial cds; mitochondrial. XX KW . XX OS Piper betle OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Magnoliidae; Piperales; Piperaceae; Piper. OG Mitochondrion XX RN [1] RP 1-415 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-415 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; e7aeacfebd010843e09733ab6377c572. XX FH Key Location/Qualifiers FH FT source 1..415 FT /organism="Piper betle" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:13217" FT gene <1..>415 FT /gene="rps7" FT CDS <1..>415 FT /codon_start=3 FT /gene="rps7" FT /product="ribosomal protein S7" FT /db_xref="GOA:Q5MEY4" FT /db_xref="InterPro:IPR000235" FT /db_xref="InterPro:IPR023798" FT /db_xref="InterPro:IPR034643" FT /db_xref="InterPro:IPR036823" FT /db_xref="UniProtKB/TrEMBL:Q5MEY4" FT /protein_id="AAW28848.1" FT /translation="QKLLIKKLVNFRMIDGKRTRVRAIVYQTFFRPARTERDVIKLIVD FT AVENIKPICEVEKVRVAGTIYDVPGIVARDRQQTLAIRWILGAAFKRRISYRISLEKCL FT FAEILYASRKRGIARNKRDNLHGLASTNRSFAH" XX SQ Sequence 415 BP; 127 A; 76 C; 94 G; 118 T; 0 other; agcaaaaact cttgatcaag aagttggtca actttcgcat gatcgatggt aaaagaacga 60 gagttcgtgc tattgtttat caaacttttt ttcgcccagc tcgaactgaa cgcgatgtaa 120 tcaaacttat agttgacgcc gtagagaata taaagcccat atgcgaagtg gaaaaagtca 180 gagttgcagg tactatttat gatgtccctg ggattgttgc cagggatcgt caacaaacct 240 tagctattcg ttggatcctt ggagcagctt tcaaacgacg tataagctac aggataagtt 300 tagaaaaatg tttatttgcg gagatacttt atgcttcccg aaagagggga attgcacgta 360 ataaaaggga taatcttcat ggactggctt ccaccaatcg aagtttcgcg cattt 415 // ID AY832305; SV 1; linear; genomic DNA; STD; PLN; 395 BP. XX AC AY832305; XX DT 24-DEC-2004 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Amborella trichopoda ribosomal protein S7 (rps7) gene, partial cds; DE mitochondrial. XX KW . XX OS Amborella trichopoda OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella. OG Mitochondrion XX RN [1] RP 1-395 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-395 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; e097c7cd3d5bc9a607957e9e8bb1fdcf. XX FH Key Location/Qualifiers FH FT source 1..395 FT /organism="Amborella trichopoda" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:13333" FT gene <1..>395 FT /gene="rps7" FT CDS <1..>395 FT /codon_start=3 FT /gene="rps7" FT /product="ribosomal protein S7" FT /db_xref="GOA:Q5MEY3" FT /db_xref="InterPro:IPR000235" FT /db_xref="InterPro:IPR023798" FT /db_xref="InterPro:IPR036823" FT /db_xref="UniProtKB/TrEMBL:Q5MEY3" FT /protein_id="AAW28849.1" FT /translation="LIKKLVNFRMIDGKRTRVRAIVYQTLNRPARTERDVIKLMVDAVE FT NIQPICEVEKVRVAGTTYDVPGIVARDRQQTLAIRWILFAAFKRRISNRISLEKCSFDE FT ILDAYRKRGIARKKRENLHGLASTNRS" XX SQ Sequence 395 BP; 127 A; 72 C; 94 G; 102 T; 0 other; aattgatcaa gaagttggtc aactttcgca tgatcgatgg taaaagaacg agagttcgtg 60 ctattgttta tcaaactttg aatcgcccag ctcgaactga acgcgatgta atcaaactta 120 tggttgacgc cgtagaaaat atacagccca tatgcgaagt ggaaaaagta agagtcgcag 180 gtactactta tgatgtccca gggattgtag ccagggatcg tcaacaaacc ttagctattc 240 gttggatcct ttttgcagct ttcaaacgac gtataagcaa caggataagc ttagagaaat 300 gttcatttga tgagatactg gatgcttacc gaaagagggg aattgcacgt aagaaaaggg 360 agaatcttca tggactggct tccaccaatc gaagt 395 // ID AY832306; SV 1; linear; genomic DNA; STD; PLN; 418 BP. XX AC AY832306; XX DT 24-DEC-2004 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Platanus occidentalis ribosomal protein S7 (rps7) gene, partial cds; DE mitochondrial. XX KW . XX OS Platanus occidentalis OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Proteales; Platanaceae; Platanus. OG Mitochondrion XX RN [1] RP 1-418 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-418 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; 0a67f3401a88bb08514fe55ead7d56be. XX FH Key Location/Qualifiers FH FT source 1..418 FT /organism="Platanus occidentalis" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:4403" FT gene <1..>418 FT /gene="rps7" FT CDS <1..>418 FT /codon_start=1 FT /gene="rps7" FT /product="ribosomal protein S7" FT /db_xref="GOA:Q5MEY2" FT /db_xref="InterPro:IPR000235" FT /db_xref="InterPro:IPR005717" FT /db_xref="InterPro:IPR023798" FT /db_xref="InterPro:IPR034643" FT /db_xref="InterPro:IPR036823" FT /db_xref="UniProtKB/TrEMBL:Q5MEY2" FT /protein_id="AAW28850.1" FT /translation="EQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMV FT DAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILGAAFKRRISYRISLEKC FT SFAEILDAYRKRGIARKKRENLHGLASTNRSFAHF" XX SQ Sequence 418 BP; 134 A; 78 C; 101 G; 105 T; 0 other; gagcaaaaac aattgatcaa gaagttggtc aactttcgca tgaaagaagg taaaagaacg 60 agagttcgtg ctattgttta tcaaactttt catcgcccag ctcgaactga acgcgatgta 120 atcaaactta tggttgacgc cgtagagaat ataaagccca tatgcgaagt ggaaaaagta 180 ggagtcgcag gtactattta tgatgtcccc gggattgtag ccagggatcg tcaacaaacc 240 ttagctattc gttggatcct tggagcagct ttcaaacgac gtataagcta caggataagc 300 ttagagaaat gttcatttgc tgagatactg gatgcttacc gaaagagggg aattgcacgt 360 aagaaaaggg agaatcttca tggactggct tccaccaatc gaagtttcgc gcatttca 418 // ID AY832307; SV 1; linear; genomic DNA; STD; PLN; 335 BP. XX AC AY832307; XX DT 12-JAN-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Philodendron oxycardium succinate oxido-reductase subunit 4 (sdh4) gene, DE partial cds; mitochondrial. XX KW . XX OS Philodendron hederaceum var. oxycardium OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Liliopsida; Araceae; Philodendroideae; OC Philodendreae; Philodendron. OG Mitochondrion XX RN [1] RP 1-335 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-335 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; f8cd7334728767b5141f9b793fa9e17c. XX FH Key Location/Qualifiers FH FT source 1..335 FT /organism="Philodendron hederaceum var. oxycardium" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:71614" FT gene <1..>335 FT /gene="sdh4" FT CDS 17..>335 FT /codon_start=1 FT /gene="sdh4" FT /product="succinate oxido-reductase subunit 4" FT /db_xref="GOA:Q5IA02" FT /db_xref="InterPro:IPR034804" FT /db_xref="UniProtKB/TrEMBL:Q5IA02" FT /protein_id="AAW47280.1" FT /translation="MKERISGLRNESSKTKRTGLFQRITAAFPPLLIIISKKKWTTFLQ FT NLSVFWHINVGIEEIMADHVHQEITRKWILVYLRLFLLIVIKDVFLFGSSFFSEQRKSK FT NL" XX SQ Sequence 335 BP; 111 A; 56 C; 67 G; 101 T; 0 other; attggtgggg aggtatatga aagaacgaat aagtggattg aggaatgaaa gctcgaagac 60 aaagagaacc gggcttttcc aaagaattac tgctgctttc ccaccccttt tgattatcat 120 atcaaaaaaa aagtggacta ctttcctaca aaatctctct gtattctggc acataaatgt 180 agggatcgaa gagattatgg cagatcatgt tcaccaagaa attacccgaa aatggatctt 240 ggtctatttg agattgttcc ttttaatcgt aatcaaagat gtttttttgt ttggatcgtc 300 tttcttttcc gaacaaagaa aatcgaagaa cctaa 335 // ID AY832308; SV 1; linear; genomic DNA; STD; PLN; 501 BP. XX AC AY832308; XX DT 12-JAN-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Platanus occidentalis succinate oxido-reductase subunit 4 (sdh4) gene, DE partial cds; mitochondrial. XX KW . XX OS Platanus occidentalis OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Proteales; Platanaceae; Platanus. OG Mitochondrion XX RN [1] RP 1-501 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-501 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; f37c57d5b6149318f32a126f41953b8b. XX FH Key Location/Qualifiers FH FT source 1..501 FT /organism="Platanus occidentalis" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:4403" FT gene 1..>501 FT /gene="sdh4" FT CDS 144..>501 FT /codon_start=1 FT /gene="sdh4" FT /product="succinate oxido-reductase subunit 4" FT /db_xref="GOA:Q5IA01" FT /db_xref="InterPro:IPR034804" FT /db_xref="UniProtKB/TrEMBL:Q5IA01" FT /protein_id="AAW47281.1" FT /translation="MKERIXGLRNESSKTKRTGLFQRITAAFPLPLIIIYKKVSSTSLP FT NLSVFWHINEGIEEIMADHVHQEMTRNWILVYLRLFLLIVIKDVFLSLVSFPNKSKNLM FT DRTHSFLNKEPNGSN" XX SQ Sequence 501 BP; 145 A; 107 C; 101 G; 147 T; 1 other; accaaggagc atcagcttga agtcccacct ctccaactga ccaaggcgca tcagcttggc 60 tttgaagcag ctgcatggta ctggcatttt gtagacgtgg ttcggttatt cccatttgtc 120 tctatctatt ggtggggagg tatatgaaag aacgaatcag nggattgagg aatgaaagct 180 cgaagacaaa gagaaccggg cttttccaaa gaattactgc agctttccca ctccctttga 240 ttatcatata caaaaaagtg tcttccactt ccctaccaaa tctctctgta ttctggcaca 300 taaatgaagg gatcgaagag attatggcag atcatgttca ccaagaaatg acccgaaatt 360 ggatcttggt ctatttgaga ttgttccttt taatcgtaat caaagatgtt ttcttgtctc 420 tcgtttcttt tccgaacaaa tcgaagaacc taatggatcg aactcattct tttctgaaca 480 aagaacctaa tggatcgaac t 501 // ID AY832309; SV 1; linear; genomic DNA; STD; PLN; 359 BP. XX AC AY832309; XX DT 12-JAN-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Asarum sp. Qiu 96018 succinate oxido-reductase subunit 4 (sdh4) gene, DE partial cds; mitochondrial. XX KW . XX OS Asarum sp. Qiu 96018 OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Magnoliidae; Piperales; Aristolochiaceae; OC Asarum. OG Mitochondrion XX RN [1] RP 1-359 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-359 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; 72e31abc470d6f8ae618dc07b3ac5813. XX FH Key Location/Qualifiers FH FT source 1..359 FT /organism="Asarum sp. Qiu 96018" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:304874" FT gene <1..>359 FT /gene="sdh4" FT CDS 105..>359 FT /codon_start=1 FT /gene="sdh4" FT /product="succinate oxido-reductase subunit 4" FT /db_xref="GOA:Q5IA00" FT /db_xref="InterPro:IPR034804" FT /db_xref="UniProtKB/TrEMBL:Q5IA00" FT /protein_id="AAW47282.1" FT /translation="MKERISGLRNESSKTKRTGLFQRITAAFPPPLISISKKVYTSLPN FT LSLFWHINVGIEEIMADHVHQEMIRNWILDYLRLFLLIVI" XX SQ Sequence 359 BP; 104 A; 66 C; 78 G; 111 T; 0 other; accaaggagc atcagcttgg ctttgaagca gctgcatggt actggcattt tgtagacgtg 60 gtttggttat tcccatttgt ctctatctat tggtggggag gtatatgaaa gaacgaataa 120 gtggattgag gaatgaaagc tcgaagacaa agagaaccgg gcttttccaa agaattactg 180 ctgctttccc accccctttg attagcattt caaaaaaagt atatacttcc ctacctaatc 240 tctctttatt ctggcacata aatgtaggga tcgaagagat tatggcagat catgttcacc 300 aagaaatgat ccgaaattgg atcttggact atttgagatt gttcctttta atcgtaatc 359 // ID AY832310; SV 1; linear; genomic DNA; STD; PLN; 423 BP. XX AC AY832310; XX DT 12-JAN-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Calycanthus floridus succinate oxido-reductase subunit 4 (sdh4) gene, DE complete cds; mitochondrial. XX KW . XX OS Calycanthus floridus OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Magnoliidae; Laurales; Calycanthaceae; OC Calycanthus. OG Mitochondrion XX RN [1] RP 1-423 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-423 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; b2b5d83170c68248873abd92a2092113. XX FH Key Location/Qualifiers FH FT source 1..423 FT /organism="Calycanthus floridus" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:3429" FT gene <1..>423 FT /gene="sdh4" FT CDS 104..412 FT /codon_start=1 FT /gene="sdh4" FT /product="succinate oxido-reductase subunit 4" FT /db_xref="GOA:Q5I9Z9" FT /db_xref="InterPro:IPR034804" FT /db_xref="UniProtKB/TrEMBL:Q5I9Z9" FT /protein_id="AAW47283.1" FT /translation="MKERISGLRNESSKTKRTGLFQRMTAAFPPPLISISKKVTTSLPN FT LSVFWHINVGIEEIMADHVHQEMIRNWILVYLRLFLLIVIKDLFLLIVFLFRTNRRT" XX SQ Sequence 423 BP; 122 A; 80 C; 91 G; 130 T; 0 other; ccaaggagca tcagcttggc tttgaagcag ctgcatggta ctggcatttt gtagacgtgg 60 ttcggttatt cccatttgtc tctatctatt ggtggggagg tatatgaagg aacgaataag 120 tggattgagg aatgaaagct cgaagacaaa gagaaccggg cttttccaaa gaatgactgc 180 agctttccca ccccctttga ttagcatttc aaaaaaagtc actacttccc tacctaatct 240 ctctgtattc tggcacataa atgtagggat cgaagagatt atggcagatc atgttcacca 300 agaaatgatc cgaaattgga tcttggtcta tttgagattg ttccttttaa tcgtaatcaa 360 agatcttttc ttgttaatag tgtttctttt ccgaacaaat cgaagaacct aatggatcga 420 act 423 // ID AY832311; SV 1; linear; genomic DNA; STD; PLN; 415 BP. XX AC AY832311; XX DT 12-JAN-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Laurus nobilis succinate oxido-reductase subunit 4 (sdh4) gene, complete DE cds; mitochondrial. XX KW . XX OS Laurus nobilis OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Magnoliidae; Laurales; Lauraceae; Laurus. OG Mitochondrion XX RN [1] RP 1-415 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-415 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; 2080a3701ce55183e1fc94e5ee6cca3f. XX FH Key Location/Qualifiers FH FT source 1..415 FT /organism="Laurus nobilis" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:85223" FT gene <1..>415 FT /gene="sdh4" FT CDS 96..404 FT /codon_start=1 FT /gene="sdh4" FT /product="succinate oxido-reductase subunit 4" FT /db_xref="GOA:Q5I9Z8" FT /db_xref="InterPro:IPR034804" FT /db_xref="UniProtKB/TrEMBL:Q5I9Z8" FT /protein_id="AAW47284.1" FT /translation="MKERISGLRNESSKTKRTGLFQRMTAAFPPPLISISKKVYTSLPN FT LSLFWHINVGIEEIMADHVHQEMIRNWILVYFRLFLLIVIKDLFLLIVFLFRTNRRT" XX SQ Sequence 415 BP; 120 A; 78 C; 84 G; 133 T; 0 other; catcagcttg gctttgaagc agctgcatgg tactggcatt ttgtagacgt ggttcggtta 60 ttcccatttg tctctatcta ttggtgggga ggtatatgaa agaacgaata agtggattga 120 ggaatgaaag ctcgaagaca aagagaaccg ggcttttcca aagaatgact gcagctttcc 180 cacccccttt gattagcatt tcaaaaaaag tatatacttc cctacctaat ctctctttat 240 tctggcacat aaatgtaggg atcgaagaga ttatggcaga tcatgttcac caagaaatga 300 tccgaaattg gatcttggtc tattttagat tgttcctttt aatcgtaatc aaagatcttt 360 tcttgttaat cgtctttctt ttccgaacaa atcgaagaac ctaatggatc gaact 415 // ID AY832312; SV 1; linear; genomic DNA; STD; PLN; 420 BP. XX AC AY832312; XX DT 12-JAN-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Liriodendron tulipifera succinate oxido-reductase subunit 4 (sdh4) gene, DE partial cds; mitochondrial. XX KW . XX OS Liriodendron tulipifera OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Magnoliidae; Magnoliales; Magnoliaceae; OC Liriodendron. OG Mitochondrion XX RN [1] RP 1-420 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-420 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; 1186df21b11c9ef43d0d366864309482. XX FH Key Location/Qualifiers FH FT source 1..420 FT /organism="Liriodendron tulipifera" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:3415" FT gene <1..>420 FT /gene="sdh4" FT CDS 104..>420 FT /codon_start=1 FT /gene="sdh4" FT /product="succinate oxido-reductase subunit 4" FT /db_xref="GOA:Q5I9Z7" FT /db_xref="InterPro:IPR034804" FT /db_xref="UniProtKB/TrEMBL:Q5I9Z7" FT /protein_id="AAW47285.1" FT /translation="MKERISGLRNESSKTKRTGLFQRMTAAFPPPLISISKKVYTSLPN FT LSLFWHINVGIEEIMADHVHQEMIRNWILVYLRLFLLIVIKDLFLLIVSFPNKSKNLMD FT RT" XX SQ Sequence 420 BP; 121 A; 81 C; 88 G; 130 T; 0 other; ccaaggagca tcagcttggc tttgaagcag ctgcatggta ctggcatttc gtagacgtgg 60 ttcggttatt cccatttgtc tctatctatt ggtggggagg tatatgaaag aacgaataag 120 tggattgagg aatgaaagct cgaagacaaa gagaaccggg cttttccaaa gaatgactgc 180 tgctttccca ccccctttga ttagcatttc aaaaaaagta tatacttccc tacctaatct 240 ctctttattc tggcacataa atgtagggat cgaagagatt atggcagatc atgttcacca 300 agaaatgatc cgaaattgga tcttggtcta tttgagattg ttccttttaa tcgtcatcaa 360 agatcttttc ttgttaatcg tttcttttcc gaacaaatcg aagaacctaa tggatcgaac 420 // ID AY832313; SV 1; linear; genomic DNA; STD; PLN; 202 BP. XX AC AY832313; XX DT 12-JAN-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Mahonia bealei succinate oxido-reductase subunit 4 (sdh4) gene, partial DE cds; mitochondrial. XX KW . XX OS Berberis bealei OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Ranunculales; Berberidaceae; Berberidoideae; OC Berberis. OG Mitochondrion XX RN [1] RP 1-202 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-202 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; f1b1f56fb8691c7ec25f01c8ad48358f. XX FH Key Location/Qualifiers FH FT source 1..202 FT /organism="Berberis bealei" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:13601" FT gene <1..>202 FT /gene="sdh4" FT CDS <1..>202 FT /codon_start=1 FT /gene="sdh4" FT /product="succinate oxido-reductase subunit 4" FT /db_xref="GOA:Q5I9Z6" FT /db_xref="UniProtKB/TrEMBL:Q5I9Z6" FT /protein_id="AAW47286.1" FT /translation="STSLPNLSVFLHINEGIXEIMADHVHQEMTRNXISVYLRLFLLIV FT IKDVFLSLVSFPNKSKNLMHRT" XX SQ Sequence 202 BP; 59 A; 44 C; 30 G; 66 T; 3 other; tcaacttccc taccaaatct ctctgtattc ttgcacataa atgaaggnat cnaagagatt 60 atggcagatc atgttcacca agaaatgacc cgaaattgna tctcggtcta tttgagattg 120 ttccttttaa tcgtaatcaa agatgttttc ttgtctctcg tttcttttcc gaacaaatcg 180 aagaacctaa tgcatcgaac tc 202 // ID AY832314; SV 1; linear; genomic DNA; STD; PLN; 430 BP. XX AC AY832314; XX DT 12-JAN-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Eschscholzia californica succinate oxido-reductase subunit 4 (sdh4) gene, DE partial cds; mitochondrial. XX KW . XX OS Eschscholzia californica (California poppy) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Ranunculales; Papaveraceae; OC Eschscholzioideae; Eschscholzia. OG Mitochondrion XX RN [1] RP 1-430 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-430 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; ea797e7bd841ffabc4c83e8dae238128. XX FH Key Location/Qualifiers FH FT source 1..430 FT /organism="Eschscholzia californica" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:3467" FT gene <1..>430 FT /gene="sdh4" FT CDS 107..>430 FT /codon_start=1 FT /gene="sdh4" FT /product="succinate oxido-reductase subunit 4" FT /db_xref="GOA:Q5I9Z5" FT /db_xref="InterPro:IPR034804" FT /db_xref="UniProtKB/TrEMBL:Q5I9Z5" FT /protein_id="AAW47287.1" FT /translation="MKERIRGLRNESSKTKRTGLFQRITAAFPLPLIIIYKKVSSTSLP FT NLSVFWHINEGIEEIMADHVHQEMTRNWILVYLRLFLLIVIKDVFLSLVSFPNKSKNLM FT DRTH" XX SQ Sequence 430 BP; 122 A; 87 C; 89 G; 132 T; 0 other; tgaccaagga gcatcagctt ggctttgaag cagctgcatg gtactggcat tttgtagacg 60 tggttcggtt attcccattt gtctctatct attggtgggg aggtatatga aggaacgaat 120 ccgtggattg aggaatgaaa gctcgaagac aaagagaacc gggcttttcc aaagaattac 180 tgcagctttc ccactccctt taattatcat atacaaaaaa gtctcttcca cttccctacc 240 aaatctctct gtattctggc acataaatga agggatcgaa gagattatgg cagatcatgt 300 tcaccaagaa atgacccgaa attggatctt ggtctatttg agattgttcc ttttaatcgt 360 aatcaaagat gttttcttgt ctctcgtttc ttttccgaac aaatcgaaga acctaatgga 420 tcgaactcat 430 // ID AY832315; SV 1; linear; genomic DNA; STD; PLN; 424 BP. XX AC AY832315; XX DT 12-JAN-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Nymphaea sp. Bergthorsson 0401 succinate oxido-reductase subunit 4 (sdh4) DE gene, partial cds; mitochondrial. XX KW . XX OS Nymphaea sp. Bergthorsson 0401 OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Nymphaeales; Nymphaeaceae; Nymphaea. OG Mitochondrion XX RN [1] RP 1-424 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-424 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; 0c91de4f434ae36613cd3b71c2d5218c. XX FH Key Location/Qualifiers FH FT source 1..424 FT /organism="Nymphaea sp. Bergthorsson 0401" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:304875" FT gene <1..>424 FT /gene="sdh4" FT CDS 106..>424 FT /codon_start=1 FT /gene="sdh4" FT /product="succinate oxido-reductase subunit 4" FT /db_xref="GOA:Q5I9Z4" FT /db_xref="InterPro:IPR034804" FT /db_xref="UniProtKB/TrEMBL:Q5I9Z4" FT /protein_id="AAW47288.1" FT /translation="MKERRSGLRNESSKTKRTGLFQRMTAAFPPPFLIISQVSFTSLPV FT LSLFWHILVGIEDIIADHVHQEMTRNLILVSLXLCLLIVIKDVFLSLXSFPNKSXNLMD FT RT" XX SQ Sequence 424 BP; 109 A; 86 C; 87 G; 139 T; 3 other; gaccaaggag catcagcttg gctttgaagc agctgcatgg tactggcatt tcgtagacgt 60 ggttcggtta ttcccatttg tctctatcta ttggtgggga ggtatatgaa agaacgaaga 120 agtggattga ggaatgaaag ctcgaagaca aagagaaccg ggcttttcca aagaatgact 180 gctgctttcc cacctccttt tcttatcata tcccaagtgt ctttcacttc cctacctgtt 240 ctttctttat tctggcacat tttagtaggg atcgaagata ttattgcaga tcatgttcac 300 caagaaatga cccgaaattt gatcttggtc tctttganat tgtgcctttt aattgtaatc 360 aaagatgttt tcttgtctct cgnttctttt ccgaacaaat cgaanaacct aatggatcga 420 actc 424 // ID AY832316; SV 1; linear; genomic DNA; STD; PLN; 417 BP. XX AC AY832316; XX DT 12-JAN-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Lonicera sp. Bergthorsson 0301 succinate oxido-reductase subunit 4 (sdh4) DE gene, partial cds; mitochondrial. XX KW . XX OS Lonicera sp. Bergthorsson 0301 OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC asterids; campanulids; Dipsacales; Caprifoliaceae; Lonicera; OC unclassified Lonicera. OG Mitochondrion XX RN [1] RP 1-417 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-417 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; 505f0238a5c81f1410f8917bffedd606. XX FH Key Location/Qualifiers FH FT source 1..417 FT /organism="Lonicera sp. Bergthorsson 0301" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:232617" FT gene <1..>417 FT /gene="sdh4" FT CDS 97..>417 FT /codon_start=1 FT /gene="sdh4" FT /product="succinate oxido-reductase subunit 4" FT /db_xref="GOA:Q5I9Z3" FT /db_xref="InterPro:IPR034804" FT /db_xref="UniProtKB/TrEMBL:Q5I9Z3" FT /protein_id="AAW47289.1" FT /translation="MKERISGLRNESSKTKRTGLFQRITAAFPLPLIIIYKKVSSTFLP FT NLSVFWHINEGIEEIMADHVHQEMTRNWILVSLRLFLLIVIKDVFLSLVSFLNKSKNLM FT DRT" XX SQ Sequence 417 BP; 116 A; 82 C; 87 G; 132 T; 0 other; gcatcagctt ggctttgaag cagctgcatg gtactggcat tttgtagacg tggttcggtt 60 attcccattt gtctctatct attggtgggg aggtatatga aggaacgaat cagtggattg 120 aggaatgaaa gctcgaagac aaagagaacc gggcttttcc aaagaattac tgcagctttc 180 ccactccctt tgattatcat atacaaaaaa gtctcttcca ctttcctacc aaatctctct 240 gtattctggc acataaatga agggatcgaa gagattatgg cagatcatgt tcaccaagaa 300 atgacccgaa attggatctt ggtctctttg agattgttcc ttttaatcgt aatcaaagat 360 gttttcttgt ctctcgtttc ttttctgaac aaatcgaaga acctaatgga tcgaact 417 // ID AY832317; SV 1; linear; genomic DNA; STD; PLN; 439 BP. XX AC AY832317; XX DT 12-JAN-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Amborella trichopoda succinate oxido-reductase subunit 4 (sdh4) gene, DE complete cds; mitochondrial. XX KW . XX OS Amborella trichopoda OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella. OG Mitochondrion XX RN [1] RP 1-439 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-439 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; c93ff3b67c486cf07f55f3e70554c137. XX FH Key Location/Qualifiers FH FT source 1..439 FT /organism="Amborella trichopoda" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:13333" FT gene <1..>439 FT /gene="sdh4" FT CDS 106..405 FT /codon_start=1 FT /gene="sdh4" FT /product="succinate oxido-reductase subunit 4" FT /db_xref="GOA:Q5I9Z2" FT /db_xref="InterPro:IPR034804" FT /db_xref="UniProtKB/TrEMBL:Q5I9Z2" FT /protein_id="AAW47290.1" FT /translation="MKERRSGLRNESSKTKRLTIIMLFQRITAAFPPPLIIISKVSLTS FT LPNLSLFWHINVGIEEIMADHVHQEITRNLILVYLRLFLLIVIKDVFLSLVSLY" XX SQ Sequence 439 BP; 124 A; 80 C; 89 G; 146 T; 0 other; gaccaaggag catcagcttg gctttgaagc tgctgcatgg tactggcatt tcgtagacgt 60 ggttcggtta ttcccatttg tctctatcta ttggtgggga ggtatatgaa ggaacgaaga 120 agtggattga ggaatgaaag ctcgaagaca aagagattga ctataattat gcttttccaa 180 agaattactg ctgctttccc accccctttg attatcatat caaaagtctc tttaacttcc 240 ctaccaaatc tctctttatt ctggcacata aatgtaggga tcgaagagat tatggcagat 300 catgttcacc aagaaattac ccgaaatttg atcttggttt atttgagatt gttcctttta 360 atcgtaatca aagatgtttt cttgtctctc gtttctttat attagatgat gcaaatcgaa 420 gaacctaatg gatcgaact 439 // ID AY832318; SV 1; linear; genomic DNA; STD; PLN; 466 BP. XX AC AY832318; XX DT 12-JAN-2005 (Rel. 82, Created) DT 15-JAN-2005 (Rel. 82, Last updated, Version 2) XX DE Amborella trichopoda succinate oxido-reductase subunit 4 (sdh4) pseudogene, DE partial sequence; mitochondrial. XX KW . XX OS Amborella trichopoda OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella. OG Mitochondrion XX RN [1] RP 1-466 RX DOI; 10.1073/pnas.0408336102. RX PUBMED; 15598737. RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT "Massive horizontal transfer of mitochondrial genes from diverse land plant RT donors to the basal angiosperm Amborella"; RL Proc. Natl. Acad. Sci. U.S.A. 101(51):17747-17752(2004). XX RN [2] RP 1-466 RA Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., Palmer J.D.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Biology, Indiana University, 1001 East Third Street, Bloomington, IN RL 47405-3700, USA XX DR MD5; 1a2c434b264eb25f4e8ee9b7864b09ad. DR EuropePMC; PMC539785; 15598737. XX FH Key Location/Qualifiers FH FT source 1..466 FT /organism="Amborella trichopoda" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:13333" FT gene 106..>466 FT /pseudo FT /gene="sdh4" FT /note="succinate oxido-reductase subunit 4; putative HGT FT copy" XX SQ Sequence 466 BP; 134 A; 79 C; 95 G; 158 T; 0 other; gaccaagaag catcagcttg gctttgaagc tgctgcatgg tactggcatt ttgtagacgt 60 ggttcggtta ttcccatttg tctctatcta ttggtgggga ggtatatgaa ggaacgaaga 120 agtggattga ggaggcgaat aaagaggaat gaaagctcga agacaaagag attgactata 180 attatgcttt tccaaagaat tactgctgct ttcccactct cttctttttt caaatactat 240 tatattagta gtatcttcca ctttcttacc aaatctctct gtattctggc acataaatga 300 agggatcaaa gagattatgg cagatcatgt tcaccaagaa atgaccctct attggatctt 360 ggtctatttt agattgttcc ttttaatcgt aatcaaagat gttttcttgt ctatcgtgtt 420 tctttatatt agatgatgca aatcgaagaa cctaatggat cgaact 466 // ID AY832319; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832319; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_3 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 753f703446250f2d95f0cc5111316d6b. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-4CL1_3" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX2" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX2" FT /protein_id="AAV92088.1" FT /translation="DDVTVITMDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKLEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 187 C; 151 G; 153 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgctccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagct cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832320; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832320; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_4 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 16795e10c73903fbb0ee1cc943d8785c. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-4CL1_4" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX6" FT /protein_id="AAV92089.1" FT /translation="DDVTVITMDGVPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKPEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 187 C; 151 G; 153 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgttccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagcc cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832321; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832321; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_1_5 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e716e4e348fbed484d01235ed0a6ff29. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-4CL1_1_5" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX8" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX8" FT /protein_id="AAV92090.1" FT /translation="DDVTVITMDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKPEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 188 C; 151 G; 152 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgctccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagcc cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832322; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832322; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_5 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e716e4e348fbed484d01235ed0a6ff29. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-4CL1_5" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX8" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX8" FT /protein_id="AAV92091.1" FT /translation="DDVTVITMDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKPEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 188 C; 151 G; 152 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgctccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagcc cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832323; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832323; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_6 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e716e4e348fbed484d01235ed0a6ff29. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #422, Washington" FT /haplotype="Pm-4CL1_6" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX8" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX8" FT /protein_id="AAV92092.1" FT /translation="DDVTVITMDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKPEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 188 C; 151 G; 152 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgctccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagcc cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832324; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832324; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_8 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 16795e10c73903fbb0ee1cc943d8785c. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-4CL1_8" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX6" FT /protein_id="AAV92093.1" FT /translation="DDVTVITMDGVPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKPEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 187 C; 151 G; 153 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgttccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagcc cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832325; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832325; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_2_5 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 16795e10c73903fbb0ee1cc943d8785c. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-4CL1_2_5" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX6" FT /protein_id="AAV92094.1" FT /translation="DDVTVITMDGVPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKPEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 187 C; 151 G; 153 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgttccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagcc cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832326; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832326; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_2_6 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 24190924aad80461f0318374e6b2876f. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-4CL1_2_6" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX3" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX3" FT /protein_id="AAV92095.1" FT /translation="DDVTVITMDGVPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKLEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 136 A; 186 C; 152 G; 154 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgttccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagct cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctgtgcccta atcgatttta cttctaac 628 // ID AY832327; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832327; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_9 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 24190924aad80461f0318374e6b2876f. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-4CL1_9" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX3" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX3" FT /protein_id="AAV92096.1" FT /translation="DDVTVITMDGVPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKLEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 136 A; 186 C; 152 G; 154 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgttccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagct cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctgtgcccta atcgatttta cttctaac 628 // ID AY832328; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832328; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_10 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 753f703446250f2d95f0cc5111316d6b. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-4CL1_10" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX2" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX2" FT /protein_id="AAV92097.1" FT /translation="DDVTVITMDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKLEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 187 C; 151 G; 153 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgctccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagct cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832329; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832329; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_11 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 16795e10c73903fbb0ee1cc943d8785c. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-4CL1_11" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX6" FT /protein_id="AAV92098.1" FT /translation="DDVTVITMDGVPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKPEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 187 C; 151 G; 153 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgttccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagcc cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832330; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832330; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_12 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 12a008d2826c6c3445d8c2490a706d18. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-4CL1_12" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX8" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX8" FT /protein_id="AAV92099.1" FT /translation="DDVTVITMDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKPEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 138 A; 188 C; 150 G; 152 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgctccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct aattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagcc cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832331; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832331; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_3_6 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 24190924aad80461f0318374e6b2876f. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-4CL1_3_6" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX3" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX3" FT /protein_id="AAV92100.1" FT /translation="DDVTVITMDGVPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKLEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 136 A; 186 C; 152 G; 154 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgttccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagct cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctgtgcccta atcgatttta cttctaac 628 // ID AY832332; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832332; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_13 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 16795e10c73903fbb0ee1cc943d8785c. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-4CL1_13" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX6" FT /protein_id="AAV92101.1" FT /translation="DDVTVITMDGVPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKPEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 187 C; 151 G; 153 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgttccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagcc cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832333; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832333; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_14 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 335147ac20c8299aa4a2ffb51dac715d. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-4CL1_14" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX2" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX2" FT /protein_id="AAV92102.1" FT /translation="DDVTVITMDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKLEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 136 A; 187 C; 152 G; 153 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgctccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagct cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctgtgcccta atcgatttta cttctaac 628 // ID AY832334; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832334; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_15 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 6cfe55512609cea4fbb70098d6fe3fc3. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-4CL1_15" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEW6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEW6" FT /protein_id="AAV92103.1" FT /translation="DDVTVITMDGAPKEGCQHISVLTEADETQCPSVEIHPEDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKLEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 186 C; 152 G; 153 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgctccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggaggacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagct cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832335; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832335; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_16 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 753f703446250f2d95f0cc5111316d6b. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-4CL1_16" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX2" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX2" FT /protein_id="AAV92104.1" FT /translation="DDVTVITMDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKLEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 187 C; 151 G; 153 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgctccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagct cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832336; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832336; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_4_5 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e716e4e348fbed484d01235ed0a6ff29. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-4CL1_4_5" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX8" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX8" FT /protein_id="AAV92105.1" FT /translation="DDVTVITMDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKPEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 188 C; 151 G; 152 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgctccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagcc cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832337; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832337; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_4_6 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; ff67c6e4e482f0826374cf8659121fbb. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-4CL1_4_6" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEW3" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEW3" FT /protein_id="AAV92106.1" FT /translation="DDVTVITMDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLATLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKLEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 136 A; 186 C; 153 G; 153 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgctccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tggcaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagct cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atggatttta cttctaac 628 // ID AY832338; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832338; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_18 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 753f703446250f2d95f0cc5111316d6b. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #472, Oregon" FT /haplotype="Pm-4CL1_18" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX2" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX2" FT /protein_id="AAV92107.1" FT /translation="DDVTVITMDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKLEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 187 C; 151 G; 153 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgctccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagct cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832339; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832339; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_19 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e716e4e348fbed484d01235ed0a6ff29. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #472, Oregon" FT /haplotype="Pm-4CL1_19" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX8" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX8" FT /protein_id="AAV92108.1" FT /translation="DDVTVITMDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKPEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 188 C; 151 G; 152 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgctccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagcc cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832340; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832340; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_20 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e716e4e348fbed484d01235ed0a6ff29. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #461, Oregon" FT /haplotype="Pm-4CL1_20" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX8" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX8" FT /protein_id="AAV92109.1" FT /translation="DDVTVITMDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKPEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 188 C; 151 G; 152 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgctccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagcc cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832341; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832341; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_5_5 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 16795e10c73903fbb0ee1cc943d8785c. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #461, Oregon" FT /haplotype="Pm-4CL1_5_5" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX6" FT /protein_id="AAV92110.1" FT /translation="DDVTVITMDGVPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKPEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 187 C; 151 G; 153 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgttccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagcc cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832342; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832342; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_5_6 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 753f703446250f2d95f0cc5111316d6b. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #461, Oregon" FT /haplotype="Pm-4CL1_5_6" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX2" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX2" FT /protein_id="AAV92111.1" FT /translation="DDVTVITMDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKLEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 187 C; 151 G; 153 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgctccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagct cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832343; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832343; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_21 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 335147ac20c8299aa4a2ffb51dac715d. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-4CL1_21" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX2" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX2" FT /protein_id="AAV92112.1" FT /translation="DDVTVITMDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKLEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 136 A; 187 C; 152 G; 153 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgctccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagct cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctgtgcccta atcgatttta cttctaac 628 // ID AY832344; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832344; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_22 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 16795e10c73903fbb0ee1cc943d8785c. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-4CL1_22" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX6" FT /protein_id="AAV92113.1" FT /translation="DDVTVITMDGVPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKPEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 187 C; 151 G; 153 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgttccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagcc cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832345; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832345; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_23 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 24190924aad80461f0318374e6b2876f. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-4CL1_23" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX3" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX3" FT /protein_id="AAV92114.1" FT /translation="DDVTVITMDGVPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKLEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 136 A; 186 C; 152 G; 154 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgttccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagct cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctgtgcccta atcgatttta cttctaac 628 // ID AY832346; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832346; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_24 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; ad955840aeb122c69a110ef4fb62891a. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-4CL1_24" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX8" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX8" FT /protein_id="AAV92115.1" FT /translation="DDVTVITMDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKPEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 187 C; 151 G; 153 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgctccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagcc cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgctttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832347; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832347; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_6_5 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 16795e10c73903fbb0ee1cc943d8785c. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-4CL1_6_5" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX6" FT /protein_id="AAV92116.1" FT /translation="DDVTVITMDGVPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKPEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 187 C; 151 G; 153 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgttccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagcc cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832348; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832348; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_6_6 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 16795e10c73903fbb0ee1cc943d8785c. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-4CL1_6_6" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX6" FT /protein_id="AAV92117.1" FT /translation="DDVTVITMDGVPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKPEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 187 C; 151 G; 153 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgttccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagcc cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832349; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832349; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_013d 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 16795e10c73903fbb0ee1cc943d8785c. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-4CL1_013d" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX6" FT /protein_id="AAV92118.1" FT /translation="DDVTVITMDGVPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKPEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 137 A; 187 C; 151 G; 153 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgttccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagcc cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctatgcccta atcgatttta cttctaac 628 // ID AY832350; SV 1; linear; genomic DNA; STD; PLN; 628 BP. XX AC AY832350; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL1_013m 4-coumarate:CoA DE ligase 1 (4CL1) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-628 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-628 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 335147ac20c8299aa4a2ffb51dac715d. XX FH Key Location/Qualifiers FH FT source 1..628 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone, Oregon" FT /haplotype="Pm-4CL1_013m" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>628 FT /gene="4CL1" FT mRNA <1..>566 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL1" FT /product="4-coumarate:CoA ligase 1" FT /db_xref="GOA:Q5MEX2" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEX2" FT /protein_id="AAV92119.1" FT /translation="DDVTVITMDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTTLLELIQRYKVTVAPIVPPIVLDITKNPVVSQYDVSSVRMII FT SGGAPLGKKLEDALRDRFPKAIFGQ" FT exon <1..566 FT /gene="4CL1" FT /number=1 XX SQ Sequence 628 BP; 136 A; 187 C; 152 G; 153 T; 0 other; gcgacgatgt gaccgtcatc accatggacg gtgctccaaa ggagggttgc caacatattt 60 ccgttctgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgacg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagggcct cgtttccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctgct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaacgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccccg ttgtttcaca atacgatgtc tcgtccgtcc 480 ggatgatcat ctctggtggt gcgcctctcg gaaagaagct cgaagacgcc ctcagagacc 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaacgccttc tctcccttcc 600 ctgtgcccta atcgatttta cttctaac 628 // ID AY832351; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832351; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_1 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 4a1e831bf6d28ef044105b3fcfadb0f9. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-4CL2_1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MET4" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MET4" FT /protein_id="AAV92120.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSKYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 139 A; 183 C; 151 G; 156 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccaa atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832352; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832352; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_2 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 2094598898919fb4b3be10a3bcd5f815. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-4CL2_2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MET7" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MET7" FT /protein_id="AAV92121.1" FT /translation="DDVIVISIDGAPKEGCKHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 139 A; 183 C; 151 G; 156 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc aaacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832353; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832353; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_3 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 5a595d99a03c17742941b9d5463ca8b5. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-4CL2_3" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92122.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 183 C; 151 G; 157 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tttcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832354; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832354; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_4 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 5a595d99a03c17742941b9d5463ca8b5. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-4CL2_4" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92123.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 183 C; 151 G; 157 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tttcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832355; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832355; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_1_5 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 5a595d99a03c17742941b9d5463ca8b5. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-4CL2_1_5" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92124.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 183 C; 151 G; 157 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tttcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832356; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832356; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_1_6 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 5a595d99a03c17742941b9d5463ca8b5. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-4CL2_1_6" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92125.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 183 C; 151 G; 157 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tttcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832357; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832357; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_5 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 30b61abf59a5a3f891a8ea34f555f72b. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-4CL2_5" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92126.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 184 C; 151 G; 156 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832358; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832358; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_6 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 30b61abf59a5a3f891a8ea34f555f72b. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #422, Washington" FT /haplotype="Pm-4CL2_6" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92127.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 184 C; 151 G; 156 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832359; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832359; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_7 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 5a595d99a03c17742941b9d5463ca8b5. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-4CL2_7" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92128.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 183 C; 151 G; 157 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tttcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832360; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832360; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_8 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; cf8614c76f1ad699829add86b4028bb4. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-4CL2_8" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92129.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 137 A; 182 C; 153 G; 157 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctctagc gttgctcagc aggtcgatgg cgagaatccg aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aagccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832361; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832361; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_2_5 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 30b61abf59a5a3f891a8ea34f555f72b. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-4CL2_2_5" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92130.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 184 C; 151 G; 156 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832362; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832362; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_2_6 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 30b61abf59a5a3f891a8ea34f555f72b. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-4CL2_2_6" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92131.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 184 C; 151 G; 156 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832363; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832363; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_9 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 2094598898919fb4b3be10a3bcd5f815. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-4CL2_9" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MET7" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MET7" FT /protein_id="AAV92132.1" FT /translation="DDVIVISIDGAPKEGCKHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 139 A; 183 C; 151 G; 156 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc aaacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832364; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832364; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_10 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 30b61abf59a5a3f891a8ea34f555f72b. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-4CL2_10" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92133.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 184 C; 151 G; 156 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832365; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832365; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_11 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 5a595d99a03c17742941b9d5463ca8b5. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-4CL2_11" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92134.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 183 C; 151 G; 157 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tttcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832366; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832366; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_12 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 4a1e831bf6d28ef044105b3fcfadb0f9. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-4CL2_12" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MET4" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MET4" FT /protein_id="AAV92135.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSKYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 139 A; 183 C; 151 G; 156 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccaa atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832367; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832367; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_3_5 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 864ea5cff25045fa51acd9c9efcc067c. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-4CL2_3_5" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92136.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 182 C; 152 G; 157 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctctagc gttgctcagc aggtcgatgg cgagaatccg aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832368; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832368; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_3_6 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 30b61abf59a5a3f891a8ea34f555f72b. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-4CL2_3_6" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92137.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 184 C; 151 G; 156 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832369; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832369; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_13 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 30b61abf59a5a3f891a8ea34f555f72b. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-4CL2_13" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92138.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 184 C; 151 G; 156 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832370; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832370; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_14 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 4a1e831bf6d28ef044105b3fcfadb0f9. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-4CL2_14" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MET4" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MET4" FT /protein_id="AAV92139.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSKYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 139 A; 183 C; 151 G; 156 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccaa atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832371; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832371; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_15 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 864ea5cff25045fa51acd9c9efcc067c. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-4CL2_15" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92140.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 182 C; 152 G; 157 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctctagc gttgctcagc aggtcgatgg cgagaatccg aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832372; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832372; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_16 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; cf8614c76f1ad699829add86b4028bb4. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-4CL2_16" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92141.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 137 A; 182 C; 153 G; 157 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctctagc gttgctcagc aggtcgatgg cgagaatccg aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aagccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832373; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832373; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_4_5 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; eb48f14bbcded7fbf0cf496386272381. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-4CL2_4_5" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92142.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 183 C; 151 G; 157 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gtaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832374; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832374; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_4_6 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 5a595d99a03c17742941b9d5463ca8b5. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-4CL2_4_6" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92143.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 183 C; 151 G; 157 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tttcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832375; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832375; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_17 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 30b61abf59a5a3f891a8ea34f555f72b. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #461, Oregon" FT /haplotype="Pm-4CL2_17" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92144.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 184 C; 151 G; 156 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832376; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832376; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_18 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 4a1e831bf6d28ef044105b3fcfadb0f9. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #472, Oregon" FT /haplotype="Pm-4CL2_18" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MET4" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MET4" FT /protein_id="AAV92145.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSKYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 139 A; 183 C; 151 G; 156 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccaa atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832377; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832377; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_19 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 5a595d99a03c17742941b9d5463ca8b5. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #472, Oregon" FT /haplotype="Pm-4CL2_19" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92146.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 183 C; 151 G; 157 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tttcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832378; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832378; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_20 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 8a9a23572fff1ccd0b50550c7cc93eab. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #461, Oregon" FT /haplotype="Pm-4CL2_20" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MER2" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MER2" FT /protein_id="AAV92147.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVAIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 137 A; 185 C; 151 G; 156 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agcaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832379; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832379; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_5_5 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 5a595d99a03c17742941b9d5463ca8b5. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #461, Oregon" FT /haplotype="Pm-4CL2_5_5" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92148.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 183 C; 151 G; 157 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tttcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832380; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832380; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_5_6 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 2b34b4b3cb194cc8202fb1b36bc095fc. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #461, Oregon" FT /haplotype="Pm-4CL2_5_6" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MES0" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MES0" FT /protein_id="AAV92149.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNHIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 139 A; 183 C; 151 G; 156 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaaccaca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832381; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832381; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_21 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 30b61abf59a5a3f891a8ea34f555f72b. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-4CL2_21" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92150.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 184 C; 151 G; 156 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832382; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832382; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_22 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 5a595d99a03c17742941b9d5463ca8b5. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-4CL2_22" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92151.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 183 C; 151 G; 157 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tttcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832383; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832383; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_23 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 30b61abf59a5a3f891a8ea34f555f72b. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-4CL2_23" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92152.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 184 C; 151 G; 156 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832384; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832384; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_24 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; eba3617663e6336a9669398dd9237bbe. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-4CL2_24" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92153.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 182 C; 151 G; 158 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggatgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tttcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832385; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832385; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_6_5 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 5a595d99a03c17742941b9d5463ca8b5. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-4CL2_6_5" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92154.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 183 C; 151 G; 157 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tttcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832386; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832386; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_6_6 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 30b61abf59a5a3f891a8ea34f555f72b. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-4CL2_6_6" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92155.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 184 C; 151 G; 156 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832387; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832387; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_013d 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 30b61abf59a5a3f891a8ea34f555f72b. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-4CL2_013d" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MEU6" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MEU6" FT /protein_id="AAV92156.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVEIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 138 A; 184 C; 151 G; 156 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agaaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832388; SV 1; linear; genomic DNA; STD; PLN; 629 BP. XX AC AY832388; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-4CL2_412m 4-coumarate:CoA DE ligase 2 (4CL2) gene, exon 1 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-629 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-629 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 8a9a23572fff1ccd0b50550c7cc93eab. XX FH Key Location/Qualifiers FH FT source 1..629 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone, Oregon" FT /haplotype="Pm-4CL2_412m" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>629 FT /gene="4CL2" FT mRNA <1..>566 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT CDS <1..>566 FT /codon_start=3 FT /gene="4CL2" FT /product="4-coumarate:CoA ligase 2" FT /db_xref="GOA:Q5MER2" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR042099" FT /db_xref="UniProtKB/TrEMBL:Q5MER2" FT /protein_id="AAV92157.1" FT /translation="DDVIVISIDGAPKEGCQHISVLTEADETQCPSVAIHPDDVVALPY FT SSGTTGLPKGVMLTHKSLVSSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVLLC FT ALRAGAATLIMQKFNLTMLLELIQRYKVTVAPIVPPIVLDITKNPIVSQYDVSSVRIIM FT SGAAPLGKELEDALRERFPKAIFGQ" FT exon <1..566 FT /gene="4CL2" FT /number=1 XX SQ Sequence 629 BP; 137 A; 185 C; 151 G; 156 T; 0 other; gcgacgatgt gatcgtcatc agcattgacg gtgctccaaa ggagggctgc caacatatct 60 ccgttttgac ggaagcggac gaaacccagt gcccgtccgt agcaatccat ccggacgatg 120 ttgtagcatt gccttattcc tcgggaacca cggggctccc aaagggcgta atgctaacgc 180 acaagagcct ggtctccagc gttgctcagc aggtcgatgg cgagaatccc aatctgtatt 240 tccattcgga ggatgtgatt ctgtgtgtct tgccgctctt ccacatctat tctctcaatt 300 cggttctcct ctgcgcgctc agagccgggg ccgcaaccct gattatgcag aaattcaacc 360 tgacaatgtt gctggagctg atccagagat acaaggttac cgttgcccca attgtgcccc 420 cgatcgtctt ggacatcaca aagaacccca ttgtttccca atacgatgtc tcgtctgtcc 480 gcataatcat gtctggcgct gcgcctctcg gaaaggagct cgaggacgcc ctcagagaac 540 gtttccccaa ggccattttc gggcaggtcg gcaaaatccg aaaccccttt tctcccattt 600 ctatgcccta atcgagtttg cttctaacg 629 // ID AY832389; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832389; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_1 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 2e01df9683dfbfa70e2e792420f0a627. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-ABA-WDS_1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ9" FT /protein_id="AAV92158.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSDYQTGSGY FT NAGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 91 A; 80 C; 92 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctctgat taccagactg gttccggtta taacgccggt tctgactacc 120 agaccgggtc tggctataac gccggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cgga 344 // ID AY832390; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832390; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_2 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 3bf4ac049868e4271ea2c78a113ffb71. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-ABA-WDS_2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ7" FT /protein_id="AAV92159.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSDYQTGSGY FT NTGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 92 A; 80 C; 91 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctccgat taccagactg gttccggtta taacgccggt tctgactatc 120 agaccgggtc tggctataac accggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cgga 344 // ID AY832391; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832391; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_3 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 109b5054bc5d7e76cc305798196bde7a. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-ABA-WDS_3" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ9" FT /protein_id="AAV92160.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSDYQTGSGY FT NAGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 91 A; 79 C; 92 G; 82 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctctgat taccagactg gttccggtta taacgccggt tctgactacc 120 agaccgggtc tggctataac gccggcaatg attatcagac tggctccggc tataacgctg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cgga 344 // ID AY832392; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832392; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_4 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; a5f6dfbb6d9355e487eefd7de352cf78. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-ABA-WDS_4" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ9" FT /protein_id="AAV92161.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSDYQTGSGY FT NAGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 90 A; 80 C; 93 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctctgat taccagactg gttccggtta taacgccggt tctgactacc 120 agaccgggtc tggctataac gccggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cggg 344 // ID AY832393; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832393; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_5 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 8d7bf84c7e024834286d8e0c963bfa75. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-ABA-WDS_5" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ7" FT /protein_id="AAV92162.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSDYQTGSGY FT NTGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 92 A; 79 C; 91 G; 82 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctctgat taccagactg gttccggtta taacgccggt tctgactatc 120 agaccgggtc tggctataac accggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cgga 344 // ID AY832394; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832394; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_6 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 3bf4ac049868e4271ea2c78a113ffb71. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #422, Washington" FT /haplotype="Pm-ABA-WDS_6" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ7" FT /protein_id="AAV92163.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSDYQTGSGY FT NTGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 92 A; 80 C; 91 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctccgat taccagactg gttccggtta taacgccggt tctgactatc 120 agaccgggtc tggctataac accggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cgga 344 // ID AY832395; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832395; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_7 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 1cc2e7f100d59d0a4a09854c20b927a9. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-ABA-WDS_7" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ1" FT /protein_id="AAV92164.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSEYQTGSGY FT NAGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 91 A; 79 C; 93 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctctgat taccagactg gttccggtta taacgccggt tctgaatacc 120 agaccgggtc tggctataac gccggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cggg 344 // ID AY832396; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832396; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_8 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; cbd50aab237f4bd4d540a194e61e44b1. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-ABA-WDS_8" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ4" FT /protein_id="AAV92165.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSDHQTGSGY FT NTGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 92 A; 80 C; 91 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctccgat taccagactg gttccggtta taacgccggt tctgaccatc 120 agaccgggtc tggctataac actggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cgga 344 // ID AY832397; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832397; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_9 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; a5f6dfbb6d9355e487eefd7de352cf78. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-ABA-WDS_9" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ9" FT /protein_id="AAV92166.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSDYQTGSGY FT NAGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 90 A; 80 C; 93 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctctgat taccagactg gttccggtta taacgccggt tctgactacc 120 agaccgggtc tggctataac gccggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cggg 344 // ID AY832398; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832398; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_10 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; a5f6dfbb6d9355e487eefd7de352cf78. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-ABA-WDS_10" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ9" FT /protein_id="AAV92167.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSDYQTGSGY FT NAGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 90 A; 80 C; 93 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctctgat taccagactg gttccggtta taacgccggt tctgactacc 120 agaccgggtc tggctataac gccggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cggg 344 // ID AY832399; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832399; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_11 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 1cc2e7f100d59d0a4a09854c20b927a9. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-ABA-WDS_11" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ1" FT /protein_id="AAV92168.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSEYQTGSGY FT NAGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 91 A; 79 C; 93 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctctgat taccagactg gttccggtta taacgccggt tctgaatacc 120 agaccgggtc tggctataac gccggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cggg 344 // ID AY832400; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832400; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_12 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 2e01df9683dfbfa70e2e792420f0a627. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-ABA-WDS_12" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ9" FT /protein_id="AAV92169.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSDYQTGSGY FT NAGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 91 A; 80 C; 92 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctctgat taccagactg gttccggtta taacgccggt tctgactacc 120 agaccgggtc tggctataac gccggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cgga 344 // ID AY832401; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832401; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_13 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 1cc2e7f100d59d0a4a09854c20b927a9. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-ABA-WDS_13" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ1" FT /protein_id="AAV92170.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSEYQTGSGY FT NAGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 91 A; 79 C; 93 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctctgat taccagactg gttccggtta taacgccggt tctgaatacc 120 agaccgggtc tggctataac gccggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cggg 344 // ID AY832402; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832402; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_14 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 1cc2e7f100d59d0a4a09854c20b927a9. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-ABA-WDS_14" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ1" FT /protein_id="AAV92171.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSEYQTGSGY FT NAGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 91 A; 79 C; 93 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctctgat taccagactg gttccggtta taacgccggt tctgaatacc 120 agaccgggtc tggctataac gccggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cggg 344 // ID AY832403; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832403; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_15 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 2e01df9683dfbfa70e2e792420f0a627. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-ABA-WDS_15" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ9" FT /protein_id="AAV92172.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSDYQTGSGY FT NAGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 91 A; 80 C; 92 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctctgat taccagactg gttccggtta taacgccggt tctgactacc 120 agaccgggtc tggctataac gccggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cgga 344 // ID AY832404; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832404; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_16 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 3f0cba5fa747f8dba6d9ca5cf46784a3. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-ABA-WDS_16" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEP6" FT /protein_id="AAV92173.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSDYQTGSGY FT NTGNDYQTGSSYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 92 A; 80 C; 91 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctccgat taccagactg gttccggtta taacgccggt tctgactatc 120 agaccgggtc tggctataac accggcaatg attatcagac tggctccagc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cggg 344 // ID AY832405; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832405; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_17 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 3bf4ac049868e4271ea2c78a113ffb71. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #461, Oregon" FT /haplotype="Pm-ABA-WDS_17" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ7" FT /protein_id="AAV92174.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSDYQTGSGY FT NTGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 92 A; 80 C; 91 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctccgat taccagactg gttccggtta taacgccggt tctgactatc 120 agaccgggtc tggctataac accggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cgga 344 // ID AY832406; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832406; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_18 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 2e01df9683dfbfa70e2e792420f0a627. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #472, Oregon" FT /haplotype="Pm-ABA-WDS_18" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ9" FT /protein_id="AAV92175.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSDYQTGSGY FT NAGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 91 A; 80 C; 92 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctctgat taccagactg gttccggtta taacgccggt tctgactacc 120 agaccgggtc tggctataac gccggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cgga 344 // ID AY832407; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832407; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_19 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 2e01df9683dfbfa70e2e792420f0a627. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #472, Oregon" FT /haplotype="Pm-ABA-WDS_19" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ9" FT /protein_id="AAV92176.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSDYQTGSGY FT NAGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 91 A; 80 C; 92 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctctgat taccagactg gttccggtta taacgccggt tctgactacc 120 agaccgggtc tggctataac gccggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cgga 344 // ID AY832408; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832408; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_20 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; a5f6dfbb6d9355e487eefd7de352cf78. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #461, Oregon" FT /haplotype="Pm-ABA-WDS_20" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ9" FT /protein_id="AAV92177.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSDYQTGSGY FT NAGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 90 A; 80 C; 93 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctctgat taccagactg gttccggtta taacgccggt tctgactacc 120 agaccgggtc tggctataac gccggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cggg 344 // ID AY832409; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832409; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_21 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 2e01df9683dfbfa70e2e792420f0a627. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-ABA-WDS_21" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ9" FT /protein_id="AAV92178.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSDYQTGSGY FT NAGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 91 A; 80 C; 92 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctctgat taccagactg gttccggtta taacgccggt tctgactacc 120 agaccgggtc tggctataac gccggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cgga 344 // ID AY832410; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832410; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_22 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 2e01df9683dfbfa70e2e792420f0a627. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-ABA-WDS_22" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ9" FT /protein_id="AAV92179.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSDYQTGSGY FT NAGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 91 A; 80 C; 92 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctctgat taccagactg gttccggtta taacgccggt tctgactacc 120 agaccgggtc tggctataac gccggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cgga 344 // ID AY832411; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832411; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_23 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 2e01df9683dfbfa70e2e792420f0a627. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-ABA-WDS_23" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ9" FT /protein_id="AAV92180.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSDYQTGSGY FT NAGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 91 A; 80 C; 92 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctctgat taccagactg gttccggtta taacgccggt tctgactacc 120 agaccgggtc tggctataac gccggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cgga 344 // ID AY832412; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832412; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_24 abscisic acid DE water deficit stress and ripening inducible-like protein gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 2e01df9683dfbfa70e2e792420f0a627. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-ABA-WDS_24" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ9" FT /protein_id="AAV92181.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSDYQTGSGY FT NAGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 91 A; 80 C; 92 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctctgat taccagactg gttccggtta taacgccggt tctgactacc 120 agaccgggtc tggctataac gccggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cgga 344 // ID AY832413; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832413; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_013d1 abscisic DE acid water deficit stress and ripening inducible-like protein gene, partial DE cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 1cc2e7f100d59d0a4a09854c20b927a9. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-ABA-WDS_013d1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ1" FT /protein_id="AAV92182.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSEYQTGSGY FT NAGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 91 A; 79 C; 93 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctctgat taccagactg gttccggtta taacgccggt tctgaatacc 120 agaccgggtc tggctataac gccggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cggg 344 // ID AY832414; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832414; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_013d2 abscisic DE acid water deficit stress and ripening inducible-like protein gene, partial DE cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 9afc5daf04b1b8a26f31b783a9212ae1. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-ABA-WDS_013d2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ9" FT /protein_id="AAV92183.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSDYQTGSGY FT NAGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 90 A; 80 C; 93 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctccgat taccagactg gttccggtta taacgccggt tctgactatc 120 agaccgggtc tggctataac gccggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cggg 344 // ID AY832415; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832415; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_412m1 abscisic DE acid water deficit stress and ripening inducible-like protein gene, partial DE cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 1cc2e7f100d59d0a4a09854c20b927a9. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone, Oregon" FT /haplotype="Pm-ABA-WDS_412m1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ1" FT /protein_id="AAV92184.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSEYQTGSGY FT NAGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 91 A; 79 C; 93 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctctgat taccagactg gttccggtta taacgccggt tctgaatacc 120 agaccgggtc tggctataac gccggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cggg 344 // ID AY832416; SV 1; linear; genomic DNA; STD; PLN; 344 BP. XX AC AY832416; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ABA-WDS_412m2 abscisic DE acid water deficit stress and ripening inducible-like protein gene, partial DE cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-344 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-344 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 1cc2e7f100d59d0a4a09854c20b927a9. XX FH Key Location/Qualifiers FH FT source 1..344 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone, Oregon" FT /haplotype="Pm-ABA-WDS_412m2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA <1..>344 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT CDS <1..>344 FT /codon_start=3 FT /product="abscisic acid water deficit stress and ripening FT inducible-like protein" FT /note="Pm-ABA-WDS-like" FT /db_xref="UniProtKB/TrEMBL:Q5MEQ1" FT /protein_id="AAV92185.1" FT /translation="LFHRKEEDDDNVNSGYADQGSYGSSDYQTGSGYNAGSEYQTGSGY FT NAGNDYQTGSGYNAGSDYQTGSGYKADSGYNADSGYNAGTGSGYQQDQSDDYETARKEE FT KHDKRKEHVG" XX SQ Sequence 344 BP; 91 A; 79 C; 93 G; 81 T; 0 other; acctcttcca ccgaaaggag gaggacgacg ataacgttaa ctcgggctat gccgatcagg 60 gttcttatgg atcctctgat taccagactg gttccggtta taacgccggt tctgaatacc 120 agaccgggtc tggctataac gccggcaatg attatcagac tggctccggc tataacgccg 180 gcagtgatta ccagactggc tctggttata aggctgattc tggttataat gctgattccg 240 gttataacgc cggcactggt tctggttatc agcaagacca atcagatgat tatgagacag 300 ctcgaaagga agagaaacac gacaagcgta aggagcatgt cggg 344 // ID AY832417; SV 1; linear; genomic DNA; STD; PLN; 608 BP. XX AC AY832417; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_1 60S ribosomal DE protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-608 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-608 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 58b63ba8a4956177567d6e0e45665fd6. XX FH Key Location/Qualifiers FH FT source 1..608 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-60SRPL31a_1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>608 FT /gene="60SRPL31a" FT mRNA join(<1..63,328..>608) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,328..607) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92186.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 328..>608 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 608 BP; 160 A; 104 C; 156 G; 188 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaag acctttaaaa caattttcct ttacatatag tagagtccat 120 actacatttt ttctcttttg atctcatcaa ggtttgggtt tttctcgttt gagttcatcg 180 tgatttcgat ttttttcata aaaaaattct catacatatc tgggaaacta ttctgcatac 240 accctcgata ggttttcaag ttcagggtgt agggttgagt gattttcgag tatttttatg 300 aattcatttc ggttttttca tctgcagcac ttttaagaaa atggctccga aggccgttaa 360 ggagatcagg aaatttgccc agaaggtgat gggaaccacc gatgtgaggc ttgatgtgaa 420 gcttaacaag tctgtatgga gcaggggtat caggagtgtt cctaggagga tgagggttcg 480 tatctccagg aagcgcaatg acgaagaaga tgcgaaggag gagctttact cgattgtgac 540 ggtggccgag gtgcctcctg aagggcttag tggattgggt actaaagttg ttgaggagga 600 agattgat 608 // ID AY832418; SV 1; linear; genomic DNA; STD; PLN; 607 BP. XX AC AY832418; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_2 60S ribosomal DE protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-607 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-607 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 7b8839531fb5e1ebe428e9a3c7a7d736. XX FH Key Location/Qualifiers FH FT source 1..607 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-60SRPL31a_2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>607 FT /gene="60SRPL31a" FT mRNA join(<1..63,327..>607) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,327..606) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92187.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 327..>607 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 607 BP; 163 A; 107 C; 153 G; 184 T; 0 other; ccgcagggac gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaaa acctttaaaa caattttcct ttacatatag tagtccatac 120 cacatttttt tctcttttga tctcatcaag atttgggttt ttctcgtttg agttcatggt 180 gatttcgatt tttttcataa aaaaattctc atacatatct gagaaactat tctgcataca 240 ccctcgatag gttttcaagt tcagggtgta gggttgagtg attttcgagt atttttacaa 300 attcatatcg gttttttcat ctgcagcact tttaagaaaa tggccccaaa ggccgttaag 360 gagatcagga aatttgccca gaaggtgatg ggaaccaccg atgtgaggct tgatgtgaag 420 cttaacaagt ctgtatggag caggggtatc aggagtgttc ctaggaggat gagggttcgt 480 atctccagga agcgcaatga cgaagaagat gcgaaggagg agctttactc gattgtgacg 540 gtggccgagg tgcctcctga agggcttagt gggttgggta ctaaggttgt tgaggaggaa 600 gattgat 607 // ID AY832419; SV 1; linear; genomic DNA; STD; PLN; 608 BP. XX AC AY832419; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_3 60S ribosomal DE protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-608 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-608 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 58b63ba8a4956177567d6e0e45665fd6. XX FH Key Location/Qualifiers FH FT source 1..608 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-60SRPL31a_3" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>608 FT /gene="60SRPL31a" FT mRNA join(<1..63,328..>608) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,328..607) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92188.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 328..>608 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 608 BP; 160 A; 104 C; 156 G; 188 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaag acctttaaaa caattttcct ttacatatag tagagtccat 120 actacatttt ttctcttttg atctcatcaa ggtttgggtt tttctcgttt gagttcatcg 180 tgatttcgat ttttttcata aaaaaattct catacatatc tgggaaacta ttctgcatac 240 accctcgata ggttttcaag ttcagggtgt agggttgagt gattttcgag tatttttatg 300 aattcatttc ggttttttca tctgcagcac ttttaagaaa atggctccga aggccgttaa 360 ggagatcagg aaatttgccc agaaggtgat gggaaccacc gatgtgaggc ttgatgtgaa 420 gcttaacaag tctgtatgga gcaggggtat caggagtgtt cctaggagga tgagggttcg 480 tatctccagg aagcgcaatg acgaagaaga tgcgaaggag gagctttact cgattgtgac 540 ggtggccgag gtgcctcctg aagggcttag tggattgggt actaaagttg ttgaggagga 600 agattgat 608 // ID AY832420; SV 1; linear; genomic DNA; STD; PLN; 608 BP. XX AC AY832420; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_4 60S ribosomal DE protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-608 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-608 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 58b63ba8a4956177567d6e0e45665fd6. XX FH Key Location/Qualifiers FH FT source 1..608 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-60SRPL31a_4" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>608 FT /gene="60SRPL31a" FT mRNA join(<1..63,328..>608) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,328..607) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92189.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 328..>608 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 608 BP; 160 A; 104 C; 156 G; 188 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaag acctttaaaa caattttcct ttacatatag tagagtccat 120 actacatttt ttctcttttg atctcatcaa ggtttgggtt tttctcgttt gagttcatcg 180 tgatttcgat ttttttcata aaaaaattct catacatatc tgggaaacta ttctgcatac 240 accctcgata ggttttcaag ttcagggtgt agggttgagt gattttcgag tatttttatg 300 aattcatttc ggttttttca tctgcagcac ttttaagaaa atggctccga aggccgttaa 360 ggagatcagg aaatttgccc agaaggtgat gggaaccacc gatgtgaggc ttgatgtgaa 420 gcttaacaag tctgtatgga gcaggggtat caggagtgtt cctaggagga tgagggttcg 480 tatctccagg aagcgcaatg acgaagaaga tgcgaaggag gagctttact cgattgtgac 540 ggtggccgag gtgcctcctg aagggcttag tggattgggt actaaagttg ttgaggagga 600 agattgat 608 // ID AY832421; SV 1; linear; genomic DNA; STD; PLN; 606 BP. XX AC AY832421; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_5 60S ribosomal DE protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-606 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-606 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 434383f42caaa043bb3b28ec6e6c7b80. XX FH Key Location/Qualifiers FH FT source 1..606 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-60SRPL31a_5" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>606 FT /gene="60SRPL31a" FT mRNA join(<1..63,326..>606) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,326..605) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92190.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 326..>606 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 606 BP; 162 A; 105 C; 152 G; 187 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaaa acctttaaaa caattttcct ttacatatag tagtccatac 120 tacatttttt ctcttttgat ctcatcaaga tttgggtttt tctcgtttga gttcatcgtg 180 atttcgattt ttttcataaa aaaattctca tacatatctg aggaactatt ctgcatacac 240 cctcgatagg ttatcaagtt cagggtgtag ggttgagtga tttttgagta tttctatgaa 300 ttcatttcgg ttttttcatc tgcagcactt ttaagaaaat ggccccaaag gccgttaagg 360 agatcaggaa atttgcccag aaggttatgg gaaccaccga tgtgaggctt gatgtgaagc 420 ttaacaagtc tgtatggagc aggggtatca ggagtgttcc taggaggatg agggttcgta 480 tctccaggaa gcgcaatgac gaagaagatg cgaaggagga gctttactcg attgtgacgg 540 tggccgaggt gcctcctgaa gggcttagtg gattgggtac taaggttgtt gaggaggaag 600 attgat 606 // ID AY832422; SV 1; linear; genomic DNA; STD; PLN; 608 BP. XX AC AY832422; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_6 60S ribosomal DE protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-608 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-608 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 58b63ba8a4956177567d6e0e45665fd6. XX FH Key Location/Qualifiers FH FT source 1..608 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #422, Washington" FT /haplotype="Pm-60SRPL31a_6" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>608 FT /gene="60SRPL31a" FT mRNA join(<1..63,328..>608) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,328..607) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92191.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 328..>608 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 608 BP; 160 A; 104 C; 156 G; 188 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaag acctttaaaa caattttcct ttacatatag tagagtccat 120 actacatttt ttctcttttg atctcatcaa ggtttgggtt tttctcgttt gagttcatcg 180 tgatttcgat ttttttcata aaaaaattct catacatatc tgggaaacta ttctgcatac 240 accctcgata ggttttcaag ttcagggtgt agggttgagt gattttcgag tatttttatg 300 aattcatttc ggttttttca tctgcagcac ttttaagaaa atggctccga aggccgttaa 360 ggagatcagg aaatttgccc agaaggtgat gggaaccacc gatgtgaggc ttgatgtgaa 420 gcttaacaag tctgtatgga gcaggggtat caggagtgtt cctaggagga tgagggttcg 480 tatctccagg aagcgcaatg acgaagaaga tgcgaaggag gagctttact cgattgtgac 540 ggtggccgag gtgcctcctg aagggcttag tggattgggt actaaagttg ttgaggagga 600 agattgat 608 // ID AY832423; SV 1; linear; genomic DNA; STD; PLN; 608 BP. XX AC AY832423; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_7 60S ribosomal DE protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-608 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-608 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 58b63ba8a4956177567d6e0e45665fd6. XX FH Key Location/Qualifiers FH FT source 1..608 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-60SRPL31a_7" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>608 FT /gene="60SRPL31a" FT mRNA join(<1..63,328..>608) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,328..607) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92192.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 328..>608 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 608 BP; 160 A; 104 C; 156 G; 188 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaag acctttaaaa caattttcct ttacatatag tagagtccat 120 actacatttt ttctcttttg atctcatcaa ggtttgggtt tttctcgttt gagttcatcg 180 tgatttcgat ttttttcata aaaaaattct catacatatc tgggaaacta ttctgcatac 240 accctcgata ggttttcaag ttcagggtgt agggttgagt gattttcgag tatttttatg 300 aattcatttc ggttttttca tctgcagcac ttttaagaaa atggctccga aggccgttaa 360 ggagatcagg aaatttgccc agaaggtgat gggaaccacc gatgtgaggc ttgatgtgaa 420 gcttaacaag tctgtatgga gcaggggtat caggagtgtt cctaggagga tgagggttcg 480 tatctccagg aagcgcaatg acgaagaaga tgcgaaggag gagctttact cgattgtgac 540 ggtggccgag gtgcctcctg aagggcttag tggattgggt actaaagttg ttgaggagga 600 agattgat 608 // ID AY832424; SV 1; linear; genomic DNA; STD; PLN; 608 BP. XX AC AY832424; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_8 60S ribosomal DE protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-608 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-608 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 58b63ba8a4956177567d6e0e45665fd6. XX FH Key Location/Qualifiers FH FT source 1..608 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-60SRPL31a_8" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>608 FT /gene="60SRPL31a" FT mRNA join(<1..63,328..>608) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,328..607) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92193.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 328..>608 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 608 BP; 160 A; 104 C; 156 G; 188 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaag acctttaaaa caattttcct ttacatatag tagagtccat 120 actacatttt ttctcttttg atctcatcaa ggtttgggtt tttctcgttt gagttcatcg 180 tgatttcgat ttttttcata aaaaaattct catacatatc tgggaaacta ttctgcatac 240 accctcgata ggttttcaag ttcagggtgt agggttgagt gattttcgag tatttttatg 300 aattcatttc ggttttttca tctgcagcac ttttaagaaa atggctccga aggccgttaa 360 ggagatcagg aaatttgccc agaaggtgat gggaaccacc gatgtgaggc ttgatgtgaa 420 gcttaacaag tctgtatgga gcaggggtat caggagtgtt cctaggagga tgagggttcg 480 tatctccagg aagcgcaatg acgaagaaga tgcgaaggag gagctttact cgattgtgac 540 ggtggccgag gtgcctcctg aagggcttag tggattgggt actaaagttg ttgaggagga 600 agattgat 608 // ID AY832425; SV 1; linear; genomic DNA; STD; PLN; 606 BP. XX AC AY832425; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_9 60S ribosomal DE protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-606 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-606 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; cc4e5991688d6f8c3c177a4e4ba32681. XX FH Key Location/Qualifiers FH FT source 1..606 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-60SRPL31a_9" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>606 FT /gene="60SRPL31a" FT mRNA join(<1..63,326..>606) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,326..605) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92194.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 326..>606 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 606 BP; 160 A; 105 C; 154 G; 187 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaaa acctttaaaa caattttcct ttacatatag tagtccatgc 120 tacatttttt ctcttttgat ctcatcaagg tttgggtttt tctcgtttga gttcatcgtg 180 atttcgattt ttttcataaa aaaattctca tacatatctg agaaactatt ctgcatacac 240 cctcgatagg ttttcaagtt cagggtgtag ggttgagtga ttttcgagta tttttatgaa 300 ttcatttcgg ttttttcatc tgcagcactt ttaagaaaat ggccccaaag gccgttaagg 360 agatcaggaa atttgcccag aaggtgatgg gaaccaccga tgtgaggctt gatgtgaagc 420 ttaacaagtc tgtatggagc aggggtatca ggagtgttcc taggaggatg agggttcgta 480 tctccaggaa gcgcaatgac gaagaagatg cgaaggagga gctttactcg attgtgacgg 540 tggccgaggt gcctcctgaa gggcttagtg gattgggtac taaggttgtt gaggaggaag 600 attgat 606 // ID AY832426; SV 1; linear; genomic DNA; STD; PLN; 607 BP. XX AC AY832426; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_10 60S DE ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-607 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-607 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 0b3848c2a1735d582ffad195e2189acd. XX FH Key Location/Qualifiers FH FT source 1..607 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-60SRPL31a_10" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>607 FT /gene="60SRPL31a" FT mRNA join(<1..63,327..>607) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,327..606) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92195.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 327..>607 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 607 BP; 162 A; 106 C; 154 G; 185 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaaa acctttaaaa caattttcct ttacatatag tagtccatac 120 cacatttttt tctcttttga tctcatcaag atttgggttt ttctcgtttg agttcatggt 180 gatttcgatt tttttcataa aaaaattctc atacatatct gagaaactat tctgcataca 240 ccctcgatag gttttcaagt tcagggtgta gggttgagtg attttcgagt atttttacga 300 attcatatcg gttttttcat ctgcagcact tttaagaaaa tggccccaaa ggccgttaag 360 gagatcagga aatttgccca gaaggtgatg ggaaccaccg atgtgaggct tgatgtgaag 420 cttaacaagt ctgtatggag caggggtatc aggagtgttc ctaggaggat gagggttcgt 480 atctccagga agcgcaatga cgaagaagat gcgaaggagg agctttactc gattgtgacg 540 gtggccgagg tgcctcctga agggcttagt gggttgggta ctaaggttgt tgaggaggaa 600 gattgat 607 // ID AY832427; SV 1; linear; genomic DNA; STD; PLN; 608 BP. XX AC AY832427; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_11 60S DE ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-608 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-608 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 58b63ba8a4956177567d6e0e45665fd6. XX FH Key Location/Qualifiers FH FT source 1..608 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-60SRPL31a_11" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>608 FT /gene="60SRPL31a" FT mRNA join(<1..63,328..>608) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,328..607) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92196.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 328..>608 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 608 BP; 160 A; 104 C; 156 G; 188 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaag acctttaaaa caattttcct ttacatatag tagagtccat 120 actacatttt ttctcttttg atctcatcaa ggtttgggtt tttctcgttt gagttcatcg 180 tgatttcgat ttttttcata aaaaaattct catacatatc tgggaaacta ttctgcatac 240 accctcgata ggttttcaag ttcagggtgt agggttgagt gattttcgag tatttttatg 300 aattcatttc ggttttttca tctgcagcac ttttaagaaa atggctccga aggccgttaa 360 ggagatcagg aaatttgccc agaaggtgat gggaaccacc gatgtgaggc ttgatgtgaa 420 gcttaacaag tctgtatgga gcaggggtat caggagtgtt cctaggagga tgagggttcg 480 tatctccagg aagcgcaatg acgaagaaga tgcgaaggag gagctttact cgattgtgac 540 ggtggccgag gtgcctcctg aagggcttag tggattgggt actaaagttg ttgaggagga 600 agattgat 608 // ID AY832428; SV 1; linear; genomic DNA; STD; PLN; 608 BP. XX AC AY832428; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_12 60S DE ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-608 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-608 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 58b63ba8a4956177567d6e0e45665fd6. XX FH Key Location/Qualifiers FH FT source 1..608 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-60SRPL31a_12" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>608 FT /gene="60SRPL31a" FT mRNA join(<1..63,328..>608) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,328..607) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92197.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 328..>608 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 608 BP; 160 A; 104 C; 156 G; 188 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaag acctttaaaa caattttcct ttacatatag tagagtccat 120 actacatttt ttctcttttg atctcatcaa ggtttgggtt tttctcgttt gagttcatcg 180 tgatttcgat ttttttcata aaaaaattct catacatatc tgggaaacta ttctgcatac 240 accctcgata ggttttcaag ttcagggtgt agggttgagt gattttcgag tatttttatg 300 aattcatttc ggttttttca tctgcagcac ttttaagaaa atggctccga aggccgttaa 360 ggagatcagg aaatttgccc agaaggtgat gggaaccacc gatgtgaggc ttgatgtgaa 420 gcttaacaag tctgtatgga gcaggggtat caggagtgtt cctaggagga tgagggttcg 480 tatctccagg aagcgcaatg acgaagaaga tgcgaaggag gagctttact cgattgtgac 540 ggtggccgag gtgcctcctg aagggcttag tggattgggt actaaagttg ttgaggagga 600 agattgat 608 // ID AY832429; SV 1; linear; genomic DNA; STD; PLN; 606 BP. XX AC AY832429; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_13 60S DE ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-606 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-606 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 2b648bfc9ecf50a93d026501a3db71bb. XX FH Key Location/Qualifiers FH FT source 1..606 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-60SRPL31a_13" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>606 FT /gene="60SRPL31a" FT mRNA join(<1..63,326..>606) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,326..605) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92198.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 326..>606 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 606 BP; 162 A; 105 C; 152 G; 187 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaaa acctttaaaa caattttcct ttacatatag tagtccatac 120 tacatctttt ctcttttgat ctcatcaaga tttgggtttt tctcgtttga gttcatcgtg 180 atttcgattt ttttcataaa aaaattctca tacatatctg agaaactatt ctgcatacac 240 cctcgatagg ttttcaagtt cagggtgtag ggttgagtga ttttcgagta tttttatgaa 300 ttcattttgg ttttttcatc tgcagcactt ttaagaaaat ggccccaaag gccgttaagg 360 agatcaggaa atttgcccag aaggtgatgg gaaccaccga tgtgaggctt gatgtgaagc 420 ttaacaagtc tgtatggagc aggggtatca ggagtgttcc taggaggatg agggttcgta 480 tctccaggaa gcgcaatgac gaagaagatg cgaaggagga gctttactcg attgtgacgg 540 tggccgaggt gcctcctgaa gggcttagtg gattgggtac taaggttgtt gaggaggaag 600 attgat 606 // ID AY832430; SV 1; linear; genomic DNA; STD; PLN; 608 BP. XX AC AY832430; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_14 60S DE ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-608 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-608 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 58b63ba8a4956177567d6e0e45665fd6. XX FH Key Location/Qualifiers FH FT source 1..608 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-60SRPL31a_14" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>608 FT /gene="60SRPL31a" FT mRNA join(<1..63,328..>608) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,328..607) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92199.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 328..>608 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 608 BP; 160 A; 104 C; 156 G; 188 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaag acctttaaaa caattttcct ttacatatag tagagtccat 120 actacatttt ttctcttttg atctcatcaa ggtttgggtt tttctcgttt gagttcatcg 180 tgatttcgat ttttttcata aaaaaattct catacatatc tgggaaacta ttctgcatac 240 accctcgata ggttttcaag ttcagggtgt agggttgagt gattttcgag tatttttatg 300 aattcatttc ggttttttca tctgcagcac ttttaagaaa atggctccga aggccgttaa 360 ggagatcagg aaatttgccc agaaggtgat gggaaccacc gatgtgaggc ttgatgtgaa 420 gcttaacaag tctgtatgga gcaggggtat caggagtgtt cctaggagga tgagggttcg 480 tatctccagg aagcgcaatg acgaagaaga tgcgaaggag gagctttact cgattgtgac 540 ggtggccgag gtgcctcctg aagggcttag tggattgggt actaaagttg ttgaggagga 600 agattgat 608 // ID AY832431; SV 1; linear; genomic DNA; STD; PLN; 608 BP. XX AC AY832431; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_15 60S DE ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-608 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-608 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 58b63ba8a4956177567d6e0e45665fd6. XX FH Key Location/Qualifiers FH FT source 1..608 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-60SRPL31a_15" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>608 FT /gene="60SRPL31a" FT mRNA join(<1..63,328..>608) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,328..607) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92200.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 328..>608 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 608 BP; 160 A; 104 C; 156 G; 188 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaag acctttaaaa caattttcct ttacatatag tagagtccat 120 actacatttt ttctcttttg atctcatcaa ggtttgggtt tttctcgttt gagttcatcg 180 tgatttcgat ttttttcata aaaaaattct catacatatc tgggaaacta ttctgcatac 240 accctcgata ggttttcaag ttcagggtgt agggttgagt gattttcgag tatttttatg 300 aattcatttc ggttttttca tctgcagcac ttttaagaaa atggctccga aggccgttaa 360 ggagatcagg aaatttgccc agaaggtgat gggaaccacc gatgtgaggc ttgatgtgaa 420 gcttaacaag tctgtatgga gcaggggtat caggagtgtt cctaggagga tgagggttcg 480 tatctccagg aagcgcaatg acgaagaaga tgcgaaggag gagctttact cgattgtgac 540 ggtggccgag gtgcctcctg aagggcttag tggattgggt actaaagttg ttgaggagga 600 agattgat 608 // ID AY832432; SV 1; linear; genomic DNA; STD; PLN; 608 BP. XX AC AY832432; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_16 60S DE ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-608 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-608 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 58b63ba8a4956177567d6e0e45665fd6. XX FH Key Location/Qualifiers FH FT source 1..608 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-60SRPL31a_16" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>608 FT /gene="60SRPL31a" FT mRNA join(<1..63,328..>608) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,328..607) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92201.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 328..>608 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 608 BP; 160 A; 104 C; 156 G; 188 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaag acctttaaaa caattttcct ttacatatag tagagtccat 120 actacatttt ttctcttttg atctcatcaa ggtttgggtt tttctcgttt gagttcatcg 180 tgatttcgat ttttttcata aaaaaattct catacatatc tgggaaacta ttctgcatac 240 accctcgata ggttttcaag ttcagggtgt agggttgagt gattttcgag tatttttatg 300 aattcatttc ggttttttca tctgcagcac ttttaagaaa atggctccga aggccgttaa 360 ggagatcagg aaatttgccc agaaggtgat gggaaccacc gatgtgaggc ttgatgtgaa 420 gcttaacaag tctgtatgga gcaggggtat caggagtgtt cctaggagga tgagggttcg 480 tatctccagg aagcgcaatg acgaagaaga tgcgaaggag gagctttact cgattgtgac 540 ggtggccgag gtgcctcctg aagggcttag tggattgggt actaaagttg ttgaggagga 600 agattgat 608 // ID AY832433; SV 1; linear; genomic DNA; STD; PLN; 606 BP. XX AC AY832433; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_17 60S DE ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-606 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-606 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 434383f42caaa043bb3b28ec6e6c7b80. XX FH Key Location/Qualifiers FH FT source 1..606 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #461, Oregon" FT /haplotype="Pm-60SRPL31a_17" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>606 FT /gene="60SRPL31a" FT mRNA join(<1..63,326..>606) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,326..605) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92202.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 326..>606 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 606 BP; 162 A; 105 C; 152 G; 187 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaaa acctttaaaa caattttcct ttacatatag tagtccatac 120 tacatttttt ctcttttgat ctcatcaaga tttgggtttt tctcgtttga gttcatcgtg 180 atttcgattt ttttcataaa aaaattctca tacatatctg aggaactatt ctgcatacac 240 cctcgatagg ttatcaagtt cagggtgtag ggttgagtga tttttgagta tttctatgaa 300 ttcatttcgg ttttttcatc tgcagcactt ttaagaaaat ggccccaaag gccgttaagg 360 agatcaggaa atttgcccag aaggttatgg gaaccaccga tgtgaggctt gatgtgaagc 420 ttaacaagtc tgtatggagc aggggtatca ggagtgttcc taggaggatg agggttcgta 480 tctccaggaa gcgcaatgac gaagaagatg cgaaggagga gctttactcg attgtgacgg 540 tggccgaggt gcctcctgaa gggcttagtg gattgggtac taaggttgtt gaggaggaag 600 attgat 606 // ID AY832434; SV 1; linear; genomic DNA; STD; PLN; 607 BP. XX AC AY832434; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 5) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_18 60S DE ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-607 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-607 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 0b3848c2a1735d582ffad195e2189acd. XX FH Key Location/Qualifiers FH FT source 1..607 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #472, Oregon" FT /haplotype="Pm-60SRPL31a_18" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>607 FT /gene="60SRPL31a" FT mRNA join(<1..63,327..>607) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,327..606) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92203.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 327..>607 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 607 BP; 162 A; 106 C; 154 G; 185 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaaa acctttaaaa caattttcct ttacatatag tagtccatac 120 cacatttttt tctcttttga tctcatcaag atttgggttt ttctcgtttg agttcatggt 180 gatttcgatt tttttcataa aaaaattctc atacatatct gagaaactat tctgcataca 240 ccctcgatag gttttcaagt tcagggtgta gggttgagtg attttcgagt atttttacga 300 attcatatcg gttttttcat ctgcagcact tttaagaaaa tggccccaaa ggccgttaag 360 gagatcagga aatttgccca gaaggtgatg ggaaccaccg atgtgaggct tgatgtgaag 420 cttaacaagt ctgtatggag caggggtatc aggagtgttc ctaggaggat gagggttcgt 480 atctccagga agcgcaatga cgaagaagat gcgaaggagg agctttactc gattgtgacg 540 gtggccgagg tgcctcctga agggcttagt gggttgggta ctaaggttgt tgaggaggaa 600 gattgat 607 // ID AY832435; SV 1; linear; genomic DNA; STD; PLN; 607 BP. XX AC AY832435; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_19 60S DE ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-607 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-607 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 7ef10ff4ee33e8aa1a93359a9b7f238f. XX FH Key Location/Qualifiers FH FT source 1..607 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #472, Oregon" FT /haplotype="Pm-60SRPL31a_19" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>607 FT /gene="60SRPL31a" FT mRNA join(<1..63,327..>607) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,327..606) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92204.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 327..>607 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 607 BP; 162 A; 107 C; 154 G; 184 T; 0 other; ccgcagggac gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaaa acctttaaaa caattttcct ttacatatag tagtccatac 120 cacatttttt tctcttttga tctcatcaag atttgggttt ttctcgtttg agttcatggt 180 gatttcgatt tttttcataa aaaaattctc atacatatct gagaaactat tctgcataca 240 ccctcgatag gttttcaagt tcagggtgta gggttgagtg attttcgagt atttttacga 300 attcatatcg gttttttcat ctgcagcact tttaagaaaa tggccccaaa ggccgttaag 360 gagatcagga aatttgccca gaaggtgatg ggaaccaccg atgtgaggct tgatgtgaag 420 cttaacaagt ctgtatggag caggggtatc aggagtgttc ctaggaggat gagggttcgt 480 atctccagga agcgcaatga cgaagaagat gcgaaggagg agctttactc gattgtgacg 540 gtggccgagg tgcctcctga agggcttagt gggttgggta ctaaggttgt tgaggaggaa 600 gattgat 607 // ID AY832436; SV 1; linear; genomic DNA; STD; PLN; 608 BP. XX AC AY832436; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_20 60S DE ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-608 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-608 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 58b63ba8a4956177567d6e0e45665fd6. XX FH Key Location/Qualifiers FH FT source 1..608 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #461, Oregon" FT /haplotype="Pm-60SRPL31a_20" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>608 FT /gene="60SRPL31a" FT mRNA join(<1..63,328..>608) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,328..607) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92205.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 328..>608 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 608 BP; 160 A; 104 C; 156 G; 188 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaag acctttaaaa caattttcct ttacatatag tagagtccat 120 actacatttt ttctcttttg atctcatcaa ggtttgggtt tttctcgttt gagttcatcg 180 tgatttcgat ttttttcata aaaaaattct catacatatc tgggaaacta ttctgcatac 240 accctcgata ggttttcaag ttcagggtgt agggttgagt gattttcgag tatttttatg 300 aattcatttc ggttttttca tctgcagcac ttttaagaaa atggctccga aggccgttaa 360 ggagatcagg aaatttgccc agaaggtgat gggaaccacc gatgtgaggc ttgatgtgaa 420 gcttaacaag tctgtatgga gcaggggtat caggagtgtt cctaggagga tgagggttcg 480 tatctccagg aagcgcaatg acgaagaaga tgcgaaggag gagctttact cgattgtgac 540 ggtggccgag gtgcctcctg aagggcttag tggattgggt actaaagttg ttgaggagga 600 agattgat 608 // ID AY832437; SV 1; linear; genomic DNA; STD; PLN; 608 BP. XX AC AY832437; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_21 60S DE ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-608 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-608 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 58b63ba8a4956177567d6e0e45665fd6. XX FH Key Location/Qualifiers FH FT source 1..608 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-60SRPL31a_21" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>608 FT /gene="60SRPL31a" FT mRNA join(<1..63,328..>608) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,328..607) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92206.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 328..>608 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 608 BP; 160 A; 104 C; 156 G; 188 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaag acctttaaaa caattttcct ttacatatag tagagtccat 120 actacatttt ttctcttttg atctcatcaa ggtttgggtt tttctcgttt gagttcatcg 180 tgatttcgat ttttttcata aaaaaattct catacatatc tgggaaacta ttctgcatac 240 accctcgata ggttttcaag ttcagggtgt agggttgagt gattttcgag tatttttatg 300 aattcatttc ggttttttca tctgcagcac ttttaagaaa atggctccga aggccgttaa 360 ggagatcagg aaatttgccc agaaggtgat gggaaccacc gatgtgaggc ttgatgtgaa 420 gcttaacaag tctgtatgga gcaggggtat caggagtgtt cctaggagga tgagggttcg 480 tatctccagg aagcgcaatg acgaagaaga tgcgaaggag gagctttact cgattgtgac 540 ggtggccgag gtgcctcctg aagggcttag tggattgggt actaaagttg ttgaggagga 600 agattgat 608 // ID AY832438; SV 1; linear; genomic DNA; STD; PLN; 606 BP. XX AC AY832438; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_22 60S DE ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-606 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-606 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; cc4e5991688d6f8c3c177a4e4ba32681. XX FH Key Location/Qualifiers FH FT source 1..606 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-60SRPL31a_22" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>606 FT /gene="60SRPL31a" FT mRNA join(<1..63,326..>606) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,326..605) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92207.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 326..>606 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 606 BP; 160 A; 105 C; 154 G; 187 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaaa acctttaaaa caattttcct ttacatatag tagtccatgc 120 tacatttttt ctcttttgat ctcatcaagg tttgggtttt tctcgtttga gttcatcgtg 180 atttcgattt ttttcataaa aaaattctca tacatatctg agaaactatt ctgcatacac 240 cctcgatagg ttttcaagtt cagggtgtag ggttgagtga ttttcgagta tttttatgaa 300 ttcatttcgg ttttttcatc tgcagcactt ttaagaaaat ggccccaaag gccgttaagg 360 agatcaggaa atttgcccag aaggtgatgg gaaccaccga tgtgaggctt gatgtgaagc 420 ttaacaagtc tgtatggagc aggggtatca ggagtgttcc taggaggatg agggttcgta 480 tctccaggaa gcgcaatgac gaagaagatg cgaaggagga gctttactcg attgtgacgg 540 tggccgaggt gcctcctgaa gggcttagtg gattgggtac taaggttgtt gaggaggaag 600 attgat 606 // ID AY832439; SV 1; linear; genomic DNA; STD; PLN; 607 BP. XX AC AY832439; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_23 60S DE ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-607 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-607 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 7ef10ff4ee33e8aa1a93359a9b7f238f. XX FH Key Location/Qualifiers FH FT source 1..607 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-60SRPL31a_23" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>607 FT /gene="60SRPL31a" FT mRNA join(<1..63,327..>607) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,327..606) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92208.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 327..>607 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 607 BP; 162 A; 107 C; 154 G; 184 T; 0 other; ccgcagggac gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaaa acctttaaaa caattttcct ttacatatag tagtccatac 120 cacatttttt tctcttttga tctcatcaag atttgggttt ttctcgtttg agttcatggt 180 gatttcgatt tttttcataa aaaaattctc atacatatct gagaaactat tctgcataca 240 ccctcgatag gttttcaagt tcagggtgta gggttgagtg attttcgagt atttttacga 300 attcatatcg gttttttcat ctgcagcact tttaagaaaa tggccccaaa ggccgttaag 360 gagatcagga aatttgccca gaaggtgatg ggaaccaccg atgtgaggct tgatgtgaag 420 cttaacaagt ctgtatggag caggggtatc aggagtgttc ctaggaggat gagggttcgt 480 atctccagga agcgcaatga cgaagaagat gcgaaggagg agctttactc gattgtgacg 540 gtggccgagg tgcctcctga agggcttagt gggttgggta ctaaggttgt tgaggaggaa 600 gattgat 607 // ID AY832440; SV 1; linear; genomic DNA; STD; PLN; 606 BP. XX AC AY832440; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_24 60S DE ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-606 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-606 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; cc4e5991688d6f8c3c177a4e4ba32681. XX FH Key Location/Qualifiers FH FT source 1..606 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-60SRPL31a_24" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>606 FT /gene="60SRPL31a" FT mRNA join(<1..63,326..>606) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,326..605) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92209.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 326..>606 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 606 BP; 160 A; 105 C; 154 G; 187 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaaa acctttaaaa caattttcct ttacatatag tagtccatgc 120 tacatttttt ctcttttgat ctcatcaagg tttgggtttt tctcgtttga gttcatcgtg 180 atttcgattt ttttcataaa aaaattctca tacatatctg agaaactatt ctgcatacac 240 cctcgatagg ttttcaagtt cagggtgtag ggttgagtga ttttcgagta tttttatgaa 300 ttcatttcgg ttttttcatc tgcagcactt ttaagaaaat ggccccaaag gccgttaagg 360 agatcaggaa atttgcccag aaggtgatgg gaaccaccga tgtgaggctt gatgtgaagc 420 ttaacaagtc tgtatggagc aggggtatca ggagtgttcc taggaggatg agggttcgta 480 tctccaggaa gcgcaatgac gaagaagatg cgaaggagga gctttactcg attgtgacgg 540 tggccgaggt gcctcctgaa gggcttagtg gattgggtac taaggttgtt gaggaggaag 600 attgat 606 // ID AY832441; SV 1; linear; genomic DNA; STD; PLN; 608 BP. XX AC AY832441; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_013d1 60S DE ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-608 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-608 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 58b63ba8a4956177567d6e0e45665fd6. XX FH Key Location/Qualifiers FH FT source 1..608 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-60SRPL31a_013d1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>608 FT /gene="60SRPL31a" FT mRNA join(<1..63,328..>608) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,328..607) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92210.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 328..>608 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 608 BP; 160 A; 104 C; 156 G; 188 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaag acctttaaaa caattttcct ttacatatag tagagtccat 120 actacatttt ttctcttttg atctcatcaa ggtttgggtt tttctcgttt gagttcatcg 180 tgatttcgat ttttttcata aaaaaattct catacatatc tgggaaacta ttctgcatac 240 accctcgata ggttttcaag ttcagggtgt agggttgagt gattttcgag tatttttatg 300 aattcatttc ggttttttca tctgcagcac ttttaagaaa atggctccga aggccgttaa 360 ggagatcagg aaatttgccc agaaggtgat gggaaccacc gatgtgaggc ttgatgtgaa 420 gcttaacaag tctgtatgga gcaggggtat caggagtgtt cctaggagga tgagggttcg 480 tatctccagg aagcgcaatg acgaagaaga tgcgaaggag gagctttact cgattgtgac 540 ggtggccgag gtgcctcctg aagggcttag tggattgggt actaaagttg ttgaggagga 600 agattgat 608 // ID AY832442; SV 1; linear; genomic DNA; STD; PLN; 606 BP. XX AC AY832442; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_013d2 60S DE ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-606 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-606 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; c6567c70fb4e0082d5c15acc487e4869. XX FH Key Location/Qualifiers FH FT source 1..606 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-60SRPL31a_013d2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>606 FT /gene="60SRPL31a" FT mRNA join(<1..63,326..>606) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,326..605) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92211.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 326..>606 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 606 BP; 161 A; 105 C; 153 G; 187 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaaa acctttaaaa caattttcct ttacatatag tagtccatgc 120 tacatttttt ctcttttgat ctcatcaagg tttgggtttt tctcgtttga gttcatcgtg 180 atttcgattt ttttcataaa aaaattctca tacatatctg agaaactatt ctgcatacac 240 cctcgatagg ttttcaagtt cagggtgtag ggttgagtga ttttcgagta tttttatgaa 300 ttcatttcgg ttttttcatc tgcagcactt ttaagaaaat ggccccaaag gccgttaagg 360 agatcaggaa atttgcccag aaggtgatgg gaaccaccga tgtgaggctt gatgtgaagc 420 ttaacaagtc tgtatggagc aggggtatca ggagtgttcc taggaggatg agggttcgta 480 tctccaggaa gcgcaatgac gaagaagatg cgaaggagga gctttactcg attgtgacgg 540 tggccgaggt gcctcctgaa gggcttagtg gattgggtac taaagttgtt gaggaggaag 600 attgat 606 // ID AY832443; SV 1; linear; genomic DNA; STD; PLN; 607 BP. XX AC AY832443; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_412m1 60S DE ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-607 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-607 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 0b3848c2a1735d582ffad195e2189acd. XX FH Key Location/Qualifiers FH FT source 1..607 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone, Oregon" FT /haplotype="Pm-60SRPL31a_412m1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>607 FT /gene="60SRPL31a" FT mRNA join(<1..63,327..>607) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,327..606) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92212.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 327..>607 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 607 BP; 162 A; 106 C; 154 G; 185 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaaa acctttaaaa caattttcct ttacatatag tagtccatac 120 cacatttttt tctcttttga tctcatcaag atttgggttt ttctcgtttg agttcatggt 180 gatttcgatt tttttcataa aaaaattctc atacatatct gagaaactat tctgcataca 240 ccctcgatag gttttcaagt tcagggtgta gggttgagtg attttcgagt atttttacga 300 attcatatcg gttttttcat ctgcagcact tttaagaaaa tggccccaaa ggccgttaag 360 gagatcagga aatttgccca gaaggtgatg ggaaccaccg atgtgaggct tgatgtgaag 420 cttaacaagt ctgtatggag caggggtatc aggagtgttc ctaggaggat gagggttcgt 480 atctccagga agcgcaatga cgaagaagat gcgaaggagg agctttactc gattgtgacg 540 gtggccgagg tgcctcctga agggcttagt gggttgggta ctaaggttgt tgaggaggaa 600 gattgat 607 // ID AY832444; SV 1; linear; genomic DNA; STD; PLN; 608 BP. XX AC AY832444; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_412m2 60S DE ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-608 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-608 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 58b63ba8a4956177567d6e0e45665fd6. XX FH Key Location/Qualifiers FH FT source 1..608 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone, Oregon" FT /haplotype="Pm-60SRPL31a_412m2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>608 FT /gene="60SRPL31a" FT mRNA join(<1..63,328..>608) FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT CDS join(<1..63,328..607) FT /codon_start=2 FT /gene="60SRPL31a" FT /product="60S ribosomal protein L31a" FT /db_xref="GOA:Q5MEN2" FT /db_xref="InterPro:IPR000054" FT /db_xref="InterPro:IPR023621" FT /db_xref="UniProtKB/TrEMBL:Q5MEN2" FT /protein_id="AAV92213.1" FT /translation="RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTT FT DVRLDVKLNKSVWSRGIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGL FT GTKVVEEED" FT exon <1..63 FT /gene="60SRPL31a" FT /number=1 FT exon 328..>608 FT /gene="60SRPL31a" FT /number=2 XX SQ Sequence 608 BP; 160 A; 104 C; 156 G; 188 T; 0 other; ccgcagggat gaggttgtta ccagggagta caccatcaat cttcacaagc gcctacatgg 60 ctggtacatg aaactctaag acctttaaaa caattttcct ttacatatag tagagtccat 120 actacatttt ttctcttttg atctcatcaa ggtttgggtt tttctcgttt gagttcatcg 180 tgatttcgat ttttttcata aaaaaattct catacatatc tgggaaacta ttctgcatac 240 accctcgata ggttttcaag ttcagggtgt agggttgagt gattttcgag tatttttatg 300 aattcatttc ggttttttca tctgcagcac ttttaagaaa atggctccga aggccgttaa 360 ggagatcagg aaatttgccc agaaggtgat gggaaccacc gatgtgaggc ttgatgtgaa 420 gcttaacaag tctgtatgga gcaggggtat caggagtgtt cctaggagga tgagggttcg 480 tatctccagg aagcgcaatg acgaagaaga tgcgaaggag gagctttact cgattgtgac 540 ggtggccgag gtgcctcctg aagggcttag tggattgggt actaaagttg ttgaggagga 600 agattgat 608 // ID AY832445; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832445; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_1 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 4836eeb5038fd5c91ef42baa49ee527a. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-40SRPS3a_1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92214.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 143 A; 64 C; 110 G; 183 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttcagaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcaaga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cagagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832446; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832446; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_2 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 48417e88e179b807632b37b87242c745. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-40SRPS3a_2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92215.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 142 A; 64 C; 111 G; 183 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttcagaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcaaga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cggagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832447; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832447; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_3 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 4836eeb5038fd5c91ef42baa49ee527a. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-40SRPS3a_3" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92216.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 143 A; 64 C; 110 G; 183 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttcagaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcaaga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cagagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832448; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832448; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_4 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 48417e88e179b807632b37b87242c745. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-40SRPS3a_4" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92217.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 142 A; 64 C; 111 G; 183 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttcagaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcaaga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cggagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832449; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832449; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_5 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 4836eeb5038fd5c91ef42baa49ee527a. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-40SRPS3a_5" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92218.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 143 A; 64 C; 110 G; 183 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttcagaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcaaga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cagagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832450; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832450; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_6 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e0c30b51c26d741c3e516aab3921636e. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #422, Washington" FT /haplotype="Pm-40SRPS3a_6" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92219.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 140 A; 64 C; 112 G; 184 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttctgaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcagga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cggagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832451; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832451; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_7 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; cb6dfb8194b3fcc5ceec480bc906a985. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-40SRPS3a_7" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92220.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 144 A; 65 C; 110 G; 181 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttataatg cttttttaaa 120 tgttatatac ttttaaattt ttaatatacg ttgtaggtac atggagatta ttccgaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcaaga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cagagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagtttat cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832452; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832452; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_8 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e0c30b51c26d741c3e516aab3921636e. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-40SRPS3a_8" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92221.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 140 A; 64 C; 112 G; 184 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttctgaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcagga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cggagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832453; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832453; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_9 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 4836eeb5038fd5c91ef42baa49ee527a. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-40SRPS3a_9" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92222.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 143 A; 64 C; 110 G; 183 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttcagaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcaaga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cagagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832454; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832454; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_10 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 4836eeb5038fd5c91ef42baa49ee527a. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-40SRPS3a_10" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92223.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 143 A; 64 C; 110 G; 183 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttcagaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcaaga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cagagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832455; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832455; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_11 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 1194147704f2a90d95bc529a55919277. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-40SRPS3a_11" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92224.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 140 A; 65 C; 112 G; 183 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttctgaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcagga tgttgattta aaagaagagt tactgttatt gaataccggg 360 attgataaaa cggagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832456; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832456; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_12 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 48417e88e179b807632b37b87242c745. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-40SRPS3a_12" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92225.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 142 A; 64 C; 111 G; 183 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttcagaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcaaga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cggagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832457; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832457; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_13 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 48417e88e179b807632b37b87242c745. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-40SRPS3a_13" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92226.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 142 A; 64 C; 111 G; 183 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttcagaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcaaga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cggagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832458; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832458; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_14 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e0c30b51c26d741c3e516aab3921636e. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-40SRPS3a_14" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92227.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 140 A; 64 C; 112 G; 184 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttctgaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcagga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cggagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832459; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832459; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_15 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e0c30b51c26d741c3e516aab3921636e. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-40SRPS3a_15" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92228.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 140 A; 64 C; 112 G; 184 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttctgaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcagga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cggagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832460; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832460; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_16 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 560759822f692cda7008c1789e757960. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-40SRPS3a_16" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92229.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 143 A; 65 C; 110 G; 182 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg cttttttaaa 120 tgttatatac ttttaaattt ttaatatacg ttgtaggtac atggagatta ttccgaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcaaga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cagagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagtttat cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832461; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832461; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_17 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 4836eeb5038fd5c91ef42baa49ee527a. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #461, Oregon" FT /haplotype="Pm-40SRPS3a_17" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92230.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 143 A; 64 C; 110 G; 183 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttcagaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcaaga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cagagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832462; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832462; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_18 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e5c2b742e705b059ad2d8272696624bb. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #472, Oregon" FT /haplotype="Pm-40SRPS3a_18" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92231.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 142 A; 63 C; 111 G; 184 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttcagaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcaaga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cggagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttatag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832463; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832463; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_19 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e0c30b51c26d741c3e516aab3921636e. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #472, Oregon" FT /haplotype="Pm-40SRPS3a_19" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92232.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 140 A; 64 C; 112 G; 184 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttctgaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcagga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cggagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832464; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832464; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_20 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e0c30b51c26d741c3e516aab3921636e. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #461, Oregon" FT /haplotype="Pm-40SRPS3a_20" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92233.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 140 A; 64 C; 112 G; 184 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttctgaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcagga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cggagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832465; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832465; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_21 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e0c30b51c26d741c3e516aab3921636e. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-40SRPS3a_21" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92234.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 140 A; 64 C; 112 G; 184 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttctgaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcagga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cggagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832466; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832466; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_22 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e0c30b51c26d741c3e516aab3921636e. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-40SRPS3a_22" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92235.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 140 A; 64 C; 112 G; 184 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttctgaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcagga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cggagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832467; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832467; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_23 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 4836eeb5038fd5c91ef42baa49ee527a. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-40SRPS3a_23" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92236.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 143 A; 64 C; 110 G; 183 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttcagaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcaaga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cagagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832468; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832468; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_24 40S ribosomal DE protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e0c30b51c26d741c3e516aab3921636e. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-40SRPS3a_24" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92237.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 140 A; 64 C; 112 G; 184 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttctgaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcagga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cggagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832469; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832469; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_013d1 40S DE ribosomal protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 560759822f692cda7008c1789e757960. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-40SRPS3a_013d1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92238.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 143 A; 65 C; 110 G; 182 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg cttttttaaa 120 tgttatatac ttttaaattt ttaatatacg ttgtaggtac atggagatta ttccgaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcaaga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cagagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagtttat cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832470; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832470; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_013d2 40S DE ribosomal protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 1194147704f2a90d95bc529a55919277. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-40SRPS3a_013d2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92239.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 140 A; 65 C; 112 G; 183 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttctgaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcagga tgttgattta aaagaagagt tactgttatt gaataccggg 360 attgataaaa cggagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832471; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832471; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_412m1 40S DE ribosomal protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 4836eeb5038fd5c91ef42baa49ee527a. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone, Oregon" FT /haplotype="Pm-40SRPS3a_412m1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92240.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 143 A; 64 C; 110 G; 183 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttcagaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcaaga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cagagatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttacag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832472; SV 1; linear; genomic DNA; STD; PLN; 500 BP. XX AC AY832472; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-40SRPS3a_412m2 40S DE ribosomal protein S3a (40SRPS3a) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-500 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-500 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 1e32555ebdac704d3c2727c16b0c8676. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone, Oregon" FT /haplotype="Pm-40SRPS3a_412m2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>500 FT /gene="40SRPS3a" FT mRNA join(<1..78,157..>500) FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT CDS join(<1..78,157..252) FT /codon_start=1 FT /gene="40SRPS3a" FT /product="40S ribosomal protein S3a" FT /db_xref="GOA:Q5MEK4" FT /db_xref="UniProtKB/TrEMBL:Q5MEK4" FT /protein_id="AAV92241.1" FT /translation="YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDE FT VPAEAETELVGA" FT 3'UTR 253..>500 FT /gene="40SRPS3a" XX SQ Sequence 500 BP; 142 A; 63 C; 110 G; 185 T; 0 other; tatcccctgc aaaatgtatt tatcagaaaa gttaaaattt tgaaggctcc aaaatttgac 60 cttggaaagc ttatggaggt aatcttcttc ccttgacctc ttttattatg ctttttaaaa 120 tgttttatac ttataaattt ttattatacg ttgtaggtac atggagatta ttcagaggat 180 gttggagtca aggttgatag gccagtcgat gaggttcctg ctgaagcaga gactgaactt 240 gtcggtgctt agctagtagt aagctgcaaa tgaagcagag gctgaacttg tcggtgctta 300 ggtagtagta ggctgcaaga tgttgattta aaagaagagt tattgttatt gaataccggg 360 attgataaaa cggatatttt tgtagctcag ttacattttg gttgactggt tcttggattc 420 aaaagttttt cactttatag tattgctagc ttataattat ttcggagtag tttgaaagaa 480 ttgtctcaat attttgttat 500 // ID AY832473; SV 1; linear; genomic DNA; STD; PLN; 858 BP. XX AC AY832473; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_1 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-858 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-858 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e401e88cde5527bbf5e982539c2f304d. XX FH Key Location/Qualifiers FH FT source 1..858 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-APX_1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>858 FT /gene="APX" FT mRNA join(<1..202,423..481,586..>858) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,423..481,586..607) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEH6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEH6" FT /protein_id="AAV92242.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 608..>858 FT /gene="APX" XX SQ Sequence 858 BP; 231 A; 147 C; 189 G; 291 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctag ttttttgtgg gagatgaaaa accatgataa 300 atcatatagc cattttgagt agtttgtcat tggtgatgat ctgcctcaaa tccttcattg 360 atcctgtgtt gttatggatt tgtggcaatc tcattggaat aaactccact gtttgtaaac 420 aggatgagga tgccttcttt gctgattatg cggaagccca cctgaagctc tctgaacttg 480 ggtaggttaa cactattact tttttttctc ttgtataatc aaaatatttt tggtcaaatg 540 caacttgata ttcatgtagt aaagactgca tctctcactt ttcaggtttg cggaggagta 600 tcagtaaaca caaagccttg aactgcatac agtgttataa atcataaacc taaaatgtca 660 agcacagaac agcatctgta gaagagccac gagagttgat gttgtgtaaa agttatccta 720 ataacagtgt cagaaattag cccctggcag tatgcatatt gtgtggtcca gtttatttct 780 attttgaata tgcctcactg tttttggtta gagagttgac tgtgttgatg agggagtgct 840 ttgtttctaa cgctgaag 858 // ID AY832474; SV 1; linear; genomic DNA; STD; PLN; 856 BP. XX AC AY832474; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_2 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-856 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-856 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; d014881b80655aeb1024967d17cda361. XX FH Key Location/Qualifiers FH FT source 1..856 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-APX_2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>856 FT /gene="APX" FT mRNA join(<1..202,421..479,584..>856) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,421..479,584..605) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEH6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEH6" FT /protein_id="AAV92243.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 606..>856 FT /gene="APX" XX SQ Sequence 856 BP; 226 A; 146 C; 191 G; 293 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctgg ttttttgtgg gagatgaaaa accatgataa 300 atcatagcca ttttgagtag tttgtcattg gtgatgatct gcctcaaatc cttcattgat 360 cctgtgttgt tatggatttg tggcaatctc attggaatga actccactgt ttgtaaacag 420 gatgaggatg ccttctttgc tgattatgcg gaagcccacc tgaagctctc tgaacttggg 480 taggttaaca ctattacttt tttttttctt gtataatcaa attttttttg gtcaaatgca 540 acttgatatt catgtagtaa agactgcatc tctcactttt caggtttgcg gaggagtatc 600 agtaaacaca aagccttgaa ctgcatacag tgttataaat cataaaccta aaatgtcaag 660 cacagaacag catctgtaga agagccacga gagttgatgt tgtgtaaaag ttatcctaat 720 aacagtgtca gaaattagcc cctggcagta tgcatattgt gtggtccagt ttatttctat 780 tttgaatatg cctcactgtt tttggttaga gagttgactg tgttgatgag ggagtgcttt 840 gtttctaacg ctgaag 856 // ID AY832475; SV 1; linear; genomic DNA; STD; PLN; 856 BP. XX AC AY832475; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_3 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-856 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-856 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 4b88294c8008774a69fd4ba342a9a816. XX FH Key Location/Qualifiers FH FT source 1..856 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-APX_3" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>856 FT /gene="APX" FT mRNA join(<1..202,421..479,584..>856) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,421..479,584..605) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEG7" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEG7" FT /protein_id="AAV92244.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEREGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 606..>856 FT /gene="APX" XX SQ Sequence 856 BP; 230 A; 145 C; 192 G; 289 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagag 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc ttttacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctgg ttttttgtgg gagatgaaaa accatgataa 300 atcatagcca ttttgagtag tttgtcattg gtgatgatct gcctcaaatc tttcattgat 360 cctgtgttgt tatggatttg tggcaatctc attggaatga actccactgt ttgtaaacag 420 gatgaggatg ccttctttgc tgattatgcg gaagcccacc tgaagctctc tgaacttggg 480 taggttaaca ctattacttt tttttctctt gtataataaa aaaaaatttg gtcaaatgca 540 acttgatatt catgtagtaa agactgcatc tctcactttt caggtttgcg gaggagtatc 600 agtaaacaca aagccttgaa ctgcatacag tgttataaat cataaaccta aaatgtcaag 660 cacagaacag catctgtaga agagccacga gagttgatgt tgtgtaaaag ttatcctaat 720 aacagtgtca gaaattagcc cctggcagta tgcatattgt gtggtccagt ttatttctat 780 tttgaatatg cctcactgtt tttggttaga gagttgactg tgttgatgag ggagtgcttt 840 gtttctaacg ctgaag 856 // ID AY832476; SV 1; linear; genomic DNA; STD; PLN; 857 BP. XX AC AY832476; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_4 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-857 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-857 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; c131013d06b28c4ca429ba2d46e2aa25. XX FH Key Location/Qualifiers FH FT source 1..857 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-APX_4" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>857 FT /gene="APX" FT mRNA join(<1..202,421..479,585..>857) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,421..479,585..606) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEH6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEH6" FT /protein_id="AAV92245.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 607..>857 FT /gene="APX" XX SQ Sequence 857 BP; 226 A; 148 C; 190 G; 293 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctgg ttttttgtgg gagatgaaaa accatgataa 300 atcatagcca ttttgagtag tttgtcattg gtgatgatct gcctcaaatc cttcattgat 360 cctgtgttgt tatggatttg tggcaatctc attggaatga actccactgt ttgtaaacag 420 gatgaggatg ccttctttgc tgattatgcg gaagcccacc tgaagctctc tgaacttggg 480 taggttaaca ctattacctt ttttctttct tgtataatca aaattttttt ggtcaaatgc 540 aacttgatat tcatgtagta aagactgcat ctctcacttt tcaggtttgc ggaggagtat 600 cagtaaacac aaagccttga actgcataca gtgttataaa tcataaacct aaaatgtcaa 660 gcacagaaca gcatctgtag aagagccacg agagttgatg ttgtgtaaaa gttatcctaa 720 taacagtgtc agaaattagc ccctggcagt atgcatattg tgtggtccag tttatttcta 780 ttttgaatat gcctcactgt ttttggttag agagttgact gtgttgattt gggagtgctt 840 tgtttctaac gctgaag 857 // ID AY832477; SV 1; linear; genomic DNA; STD; PLN; 858 BP. XX AC AY832477; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_5 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-858 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-858 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; c8d03894629e992ac4a3a54a73fc6848. XX FH Key Location/Qualifiers FH FT source 1..858 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-APX_5" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>858 FT /gene="APX" FT mRNA join(<1..202,423..481,586..>858) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,423..481,586..607) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEH6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEH6" FT /protein_id="AAV92246.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 608..>858 FT /gene="APX" XX SQ Sequence 858 BP; 231 A; 147 C; 189 G; 291 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctag ttttttgtgg gagatgaaaa accatgataa 300 atcatatagc cattttgagt agtttgtcat tggtgatgat ctgcctcaaa tccttcattg 360 atcctgtgtt gttatggatt tgtggcaatc tcattggaat aaactccact gtttgtaaac 420 aggatgagga tgccttcttt gctgattatg cggaagccca cctgaagctc tctgaacttg 480 ggtaggttaa cactattact tttttttctc ttgtataatc aaaatatttt tggtcaaatg 540 caacttgata ttcatgtagt aaagactgca tctctcactt ttcaggtttg cggaggagta 600 tcagtaaaca caaagccttg aactgctaac agtgttataa atcataaacc taaaatgtca 660 agcacagaac agcatctgta gaagagccac gagagttgat gttgtgtaaa agttatccta 720 ataacagtgt cagaaattag cccctggcag tatgcatatt gtgtggtcca gtttatttct 780 attttgaata tgcctcactg tttttggtta gagagttgac tgtgttgatg agggagtgct 840 ttgtttctaa cgctgaag 858 // ID AY832478; SV 1; linear; genomic DNA; STD; PLN; 856 BP. XX AC AY832478; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_6 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-856 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-856 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 8072474e702b5cfb22d0c47395d18a07. XX FH Key Location/Qualifiers FH FT source 1..856 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #422, Washington" FT /haplotype="Pm-APX_6" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>856 FT /gene="APX" FT mRNA join(<1..202,421..479,584..>856) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,421..479,584..605) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEH6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEH6" FT /protein_id="AAV92247.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 606..>856 FT /gene="APX" XX SQ Sequence 856 BP; 227 A; 146 C; 191 G; 292 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctgg ttttttgtgg gagatgaaaa accatgataa 300 atcatagcca ttttgagtag tttgtcattg gtgatgatct gcctcaaatc cttcattgat 360 cctgtgttgt tatggatttg tggcaatctc attggaatga actccactgt ttgtaaacag 420 gatgaggatg ccttctttgc tgattatgcg gaagcccacc tgaagctctc tgaacttggg 480 taggttaaca ctattacttt tttttttctt gtataatcaa aatttttttg gtcaaatgca 540 acttgatatt catgtagtaa agactgcatc tctcactttt caggtttgcg gaggagtatc 600 agtaaacaca aagccttgaa ctgcatacag tgttataaat cataaaccta aaatgtcaag 660 cacagaacag catctgtaga agagccacga gagttgatgt tgtgtaaaag ttatcctaat 720 aacagtgtca gaaattagcc cctggcagta tgcatattgt gtggtccagt ttatttctat 780 tttgaatatg cctcactgtt tttggttaga gagttgactg tgttgatgag ggagtgcttt 840 gtttctaacg ctgaag 856 // ID AY832479; SV 1; linear; genomic DNA; STD; PLN; 858 BP. XX AC AY832479; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_7 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-858 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-858 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e401e88cde5527bbf5e982539c2f304d. XX FH Key Location/Qualifiers FH FT source 1..858 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-APX_7" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>858 FT /gene="APX" FT mRNA join(<1..202,423..481,586..>858) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,423..481,586..607) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEH6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEH6" FT /protein_id="AAV92248.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 608..>858 FT /gene="APX" XX SQ Sequence 858 BP; 231 A; 147 C; 189 G; 291 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctag ttttttgtgg gagatgaaaa accatgataa 300 atcatatagc cattttgagt agtttgtcat tggtgatgat ctgcctcaaa tccttcattg 360 atcctgtgtt gttatggatt tgtggcaatc tcattggaat aaactccact gtttgtaaac 420 aggatgagga tgccttcttt gctgattatg cggaagccca cctgaagctc tctgaacttg 480 ggtaggttaa cactattact tttttttctc ttgtataatc aaaatatttt tggtcaaatg 540 caacttgata ttcatgtagt aaagactgca tctctcactt ttcaggtttg cggaggagta 600 tcagtaaaca caaagccttg aactgcatac agtgttataa atcataaacc taaaatgtca 660 agcacagaac agcatctgta gaagagccac gagagttgat gttgtgtaaa agttatccta 720 ataacagtgt cagaaattag cccctggcag tatgcatatt gtgtggtcca gtttatttct 780 attttgaata tgcctcactg tttttggtta gagagttgac tgtgttgatg agggagtgct 840 ttgtttctaa cgctgaag 858 // ID AY832480; SV 1; linear; genomic DNA; STD; PLN; 856 BP. XX AC AY832480; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_8 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-856 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-856 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 8072474e702b5cfb22d0c47395d18a07. XX FH Key Location/Qualifiers FH FT source 1..856 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-APX_8" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>856 FT /gene="APX" FT mRNA join(<1..202,421..479,584..>856) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,421..479,584..605) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEH6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEH6" FT /protein_id="AAV92249.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 606..>856 FT /gene="APX" XX SQ Sequence 856 BP; 227 A; 146 C; 191 G; 292 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctgg ttttttgtgg gagatgaaaa accatgataa 300 atcatagcca ttttgagtag tttgtcattg gtgatgatct gcctcaaatc cttcattgat 360 cctgtgttgt tatggatttg tggcaatctc attggaatga actccactgt ttgtaaacag 420 gatgaggatg ccttctttgc tgattatgcg gaagcccacc tgaagctctc tgaacttggg 480 taggttaaca ctattacttt tttttttctt gtataatcaa aatttttttg gtcaaatgca 540 acttgatatt catgtagtaa agactgcatc tctcactttt caggtttgcg gaggagtatc 600 agtaaacaca aagccttgaa ctgcatacag tgttataaat cataaaccta aaatgtcaag 660 cacagaacag catctgtaga agagccacga gagttgatgt tgtgtaaaag ttatcctaat 720 aacagtgtca gaaattagcc cctggcagta tgcatattgt gtggtccagt ttatttctat 780 tttgaatatg cctcactgtt tttggttaga gagttgactg tgttgatgag ggagtgcttt 840 gtttctaacg ctgaag 856 // ID AY832481; SV 1; linear; genomic DNA; STD; PLN; 858 BP. XX AC AY832481; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_9 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-858 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-858 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; c8d03894629e992ac4a3a54a73fc6848. XX FH Key Location/Qualifiers FH FT source 1..858 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-APX_9" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>858 FT /gene="APX" FT mRNA join(<1..202,423..481,586..>858) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,423..481,586..607) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEH6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEH6" FT /protein_id="AAV92250.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 608..>858 FT /gene="APX" XX SQ Sequence 858 BP; 231 A; 147 C; 189 G; 291 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctag ttttttgtgg gagatgaaaa accatgataa 300 atcatatagc cattttgagt agtttgtcat tggtgatgat ctgcctcaaa tccttcattg 360 atcctgtgtt gttatggatt tgtggcaatc tcattggaat aaactccact gtttgtaaac 420 aggatgagga tgccttcttt gctgattatg cggaagccca cctgaagctc tctgaacttg 480 ggtaggttaa cactattact tttttttctc ttgtataatc aaaatatttt tggtcaaatg 540 caacttgata ttcatgtagt aaagactgca tctctcactt ttcaggtttg cggaggagta 600 tcagtaaaca caaagccttg aactgctaac agtgttataa atcataaacc taaaatgtca 660 agcacagaac agcatctgta gaagagccac gagagttgat gttgtgtaaa agttatccta 720 ataacagtgt cagaaattag cccctggcag tatgcatatt gtgtggtcca gtttatttct 780 attttgaata tgcctcactg tttttggtta gagagttgac tgtgttgatg agggagtgct 840 ttgtttctaa cgctgaag 858 // ID AY832482; SV 1; linear; genomic DNA; STD; PLN; 856 BP. XX AC AY832482; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_10 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-856 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-856 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; d014881b80655aeb1024967d17cda361. XX FH Key Location/Qualifiers FH FT source 1..856 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-APX_10" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>856 FT /gene="APX" FT mRNA join(<1..202,421..479,584..>856) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,421..479,584..605) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEH6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEH6" FT /protein_id="AAV92251.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 606..>856 FT /gene="APX" XX SQ Sequence 856 BP; 226 A; 146 C; 191 G; 293 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctgg ttttttgtgg gagatgaaaa accatgataa 300 atcatagcca ttttgagtag tttgtcattg gtgatgatct gcctcaaatc cttcattgat 360 cctgtgttgt tatggatttg tggcaatctc attggaatga actccactgt ttgtaaacag 420 gatgaggatg ccttctttgc tgattatgcg gaagcccacc tgaagctctc tgaacttggg 480 taggttaaca ctattacttt tttttttctt gtataatcaa attttttttg gtcaaatgca 540 acttgatatt catgtagtaa agactgcatc tctcactttt caggtttgcg gaggagtatc 600 agtaaacaca aagccttgaa ctgcatacag tgttataaat cataaaccta aaatgtcaag 660 cacagaacag catctgtaga agagccacga gagttgatgt tgtgtaaaag ttatcctaat 720 aacagtgtca gaaattagcc cctggcagta tgcatattgt gtggtccagt ttatttctat 780 tttgaatatg cctcactgtt tttggttaga gagttgactg tgttgatgag ggagtgcttt 840 gtttctaacg ctgaag 856 // ID AY832483; SV 1; linear; genomic DNA; STD; PLN; 863 BP. XX AC AY832483; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_11 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-863 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-863 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 0fc470292e8db84a84b3336ea251717b. XX FH Key Location/Qualifiers FH FT source 1..863 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-APX_11" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>863 FT /gene="APX" FT mRNA join(<1..202,421..479,584..>863) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,421..479,584..605) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEG7" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEG7" FT /protein_id="AAV92252.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEREGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 606..>863 FT /gene="APX" XX SQ Sequence 863 BP; 230 A; 149 C; 193 G; 291 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagag 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc ttttacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctgg ttttttgtgg gagatgaaaa accatgataa 300 atcatagcca ttttgagtag tttgtcattg gtgatgatct gcctcaaatc tttcattgat 360 cctgtgttgt tatggatttg tggcaatctc attggaatga actccactgt ttgtaaacag 420 gatgaggatg ccttctttgc tgattatgcg gaagcccacc tgaagctctc tgaacttggg 480 taggttaaca ctattacttt tttttctctt gtataatcaa aaaaaatttg gtcaaatgca 540 acttgatatt catgtagtaa agactgcatc tctcactttt caggttcgcg gaggagtatc 600 agtaaacaca aagccttgaa ctgcatacag tgttataaat cataaaccta aaatgtcaag 660 cacagaacag catctgtaga agagccacga gagttgatgt tgtgtaaaag ttatcctaat 720 aacagtgtca gaaattagcc cctggcagta tgcatattgt cacttgtgtg gtccagttta 780 tttctatttt gaatatgcct cactgttttt ggttagagag ttgactgtgt tgatgaggga 840 gtgctttgtt tctaacgctg aag 863 // ID AY832484; SV 1; linear; genomic DNA; STD; PLN; 858 BP. XX AC AY832484; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_12 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-858 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-858 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e401e88cde5527bbf5e982539c2f304d. XX FH Key Location/Qualifiers FH FT source 1..858 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-APX_12" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>858 FT /gene="APX" FT mRNA join(<1..202,423..481,586..>858) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,423..481,586..607) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEH6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEH6" FT /protein_id="AAV92253.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 608..>858 FT /gene="APX" XX SQ Sequence 858 BP; 231 A; 147 C; 189 G; 291 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctag ttttttgtgg gagatgaaaa accatgataa 300 atcatatagc cattttgagt agtttgtcat tggtgatgat ctgcctcaaa tccttcattg 360 atcctgtgtt gttatggatt tgtggcaatc tcattggaat aaactccact gtttgtaaac 420 aggatgagga tgccttcttt gctgattatg cggaagccca cctgaagctc tctgaacttg 480 ggtaggttaa cactattact tttttttctc ttgtataatc aaaatatttt tggtcaaatg 540 caacttgata ttcatgtagt aaagactgca tctctcactt ttcaggtttg cggaggagta 600 tcagtaaaca caaagccttg aactgcatac agtgttataa atcataaacc taaaatgtca 660 agcacagaac agcatctgta gaagagccac gagagttgat gttgtgtaaa agttatccta 720 ataacagtgt cagaaattag cccctggcag tatgcatatt gtgtggtcca gtttatttct 780 attttgaata tgcctcactg tttttggtta gagagttgac tgtgttgatg agggagtgct 840 ttgtttctaa cgctgaag 858 // ID AY832485; SV 1; linear; genomic DNA; STD; PLN; 856 BP. XX AC AY832485; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_13 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-856 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-856 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 259fcce8ed0bffe3379ff9818485485f. XX FH Key Location/Qualifiers FH FT source 1..856 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-APX_13" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>856 FT /gene="APX" FT mRNA join(<1..202,421..479,584..>856) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,421..479,584..605) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEH6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEH6" FT /protein_id="AAV92254.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 606..>856 FT /gene="APX" XX SQ Sequence 856 BP; 226 A; 146 C; 190 G; 294 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctgg ttttttgtgg gagatgaaaa accatgataa 300 atcatagcca ttttgagtag tttgtcattg gtgatgatct gcctcaaatc cttcattgat 360 cctgtgttgt tatggatttg tggcaatctc attggaatga actccactgt ttgtaaacag 420 gatgaggatg ccttctttgc tgattatgcg gaagcccacc tgaagctctc tgaacttggg 480 taggttaaca ctattacttt tttttttctt gtataatcaa aatttttttg gtcaaatgca 540 acttgatatt catgtagtaa agactgcatc tctcactttt caggtttgcg gaggagtatc 600 agtaaacaca aagccttgaa ctgcatacag tgttataaat cataaaccta aaatgtcaag 660 cacagaacag catctgtaga agagccacga gagttgatgt tgtgtaaaag ttatcctaat 720 aacagtgtca gaaattagcc cctggcagta tgcatattgt gtggtccagt ttatttctat 780 tttgaatatg cctcactgtt tttggttaga gagttgactg tgttgatttg ggagtgcttt 840 gtttctaacg ctgaag 856 // ID AY832486; SV 1; linear; genomic DNA; STD; PLN; 856 BP. XX AC AY832486; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_14 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-856 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-856 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 32821f115194888162b7ed1e091a4e16. XX FH Key Location/Qualifiers FH FT source 1..856 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-APX_14" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>856 FT /gene="APX" FT mRNA join(<1..202,421..479,584..>856) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,421..479,584..605) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEH6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEH6" FT /protein_id="AAV92255.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 606..>856 FT /gene="APX" XX SQ Sequence 856 BP; 227 A; 145 C; 192 G; 292 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctgg ttttttgtgg gagatgaaaa accatgataa 300 atcatagcca ttttgagtag tttgtcattg gtgatgatct gcctcaaatc cttcattgat 360 cctgtgttgt tatggatttg tggcaatctc attggaatga actccactgt ttgtaaacag 420 gatgaggatg ccttctttgc tgattatgcg gaagcccacc tgaagctctc tgaacttggg 480 taggttaaca ctattacttt tttttttctt gtataatcaa aatttttttg gtcaaatgca 540 acttgatatt catgtagtaa agactgcatc tctcactttt caggtttgcg gaggagtatc 600 agtaaacaga aagccttgaa ctgcatacag tgttataaat cataaaccta aaatgtcaag 660 cacagaacag catctgtaga agagccacga gagttgatgt tgtgtaaaag ttatcctaat 720 aacagtgtca gaaattagcc cctggcagta tgcatattgt gtggtccagt ttatttctat 780 tttgaatatg cctcactgtt tttggttaga gagttgactg tgttgatgag ggagtgcttt 840 gtttctaacg ctgaag 856 // ID AY832487; SV 1; linear; genomic DNA; STD; PLN; 856 BP. XX AC AY832487; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_15 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-856 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-856 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 4b88294c8008774a69fd4ba342a9a816. XX FH Key Location/Qualifiers FH FT source 1..856 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-APX_15" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>856 FT /gene="APX" FT mRNA join(<1..202,421..479,584..>856) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,421..479,584..605) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEG7" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEG7" FT /protein_id="AAV92256.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEREGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 606..>856 FT /gene="APX" XX SQ Sequence 856 BP; 230 A; 145 C; 192 G; 289 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagag 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc ttttacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctgg ttttttgtgg gagatgaaaa accatgataa 300 atcatagcca ttttgagtag tttgtcattg gtgatgatct gcctcaaatc tttcattgat 360 cctgtgttgt tatggatttg tggcaatctc attggaatga actccactgt ttgtaaacag 420 gatgaggatg ccttctttgc tgattatgcg gaagcccacc tgaagctctc tgaacttggg 480 taggttaaca ctattacttt tttttctctt gtataataaa aaaaaatttg gtcaaatgca 540 acttgatatt catgtagtaa agactgcatc tctcactttt caggtttgcg gaggagtatc 600 agtaaacaca aagccttgaa ctgcatacag tgttataaat cataaaccta aaatgtcaag 660 cacagaacag catctgtaga agagccacga gagttgatgt tgtgtaaaag ttatcctaat 720 aacagtgtca gaaattagcc cctggcagta tgcatattgt gtggtccagt ttatttctat 780 tttgaatatg cctcactgtt tttggttaga gagttgactg tgttgatgag ggagtgcttt 840 gtttctaacg ctgaag 856 // ID AY832488; SV 1; linear; genomic DNA; STD; PLN; 858 BP. XX AC AY832488; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_16 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-858 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-858 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e401e88cde5527bbf5e982539c2f304d. XX FH Key Location/Qualifiers FH FT source 1..858 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-APX_16" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>858 FT /gene="APX" FT mRNA join(<1..202,423..481,586..>858) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,423..481,586..607) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEH6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEH6" FT /protein_id="AAV92257.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 608..>858 FT /gene="APX" XX SQ Sequence 858 BP; 231 A; 147 C; 189 G; 291 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctag ttttttgtgg gagatgaaaa accatgataa 300 atcatatagc cattttgagt agtttgtcat tggtgatgat ctgcctcaaa tccttcattg 360 atcctgtgtt gttatggatt tgtggcaatc tcattggaat aaactccact gtttgtaaac 420 aggatgagga tgccttcttt gctgattatg cggaagccca cctgaagctc tctgaacttg 480 ggtaggttaa cactattact tttttttctc ttgtataatc aaaatatttt tggtcaaatg 540 caacttgata ttcatgtagt aaagactgca tctctcactt ttcaggtttg cggaggagta 600 tcagtaaaca caaagccttg aactgcatac agtgttataa atcataaacc taaaatgtca 660 agcacagaac agcatctgta gaagagccac gagagttgat gttgtgtaaa agttatccta 720 ataacagtgt cagaaattag cccctggcag tatgcatatt gtgtggtcca gtttatttct 780 attttgaata tgcctcactg tttttggtta gagagttgac tgtgttgatg agggagtgct 840 ttgtttctaa cgctgaag 858 // ID AY832489; SV 1; linear; genomic DNA; STD; PLN; 858 BP. XX AC AY832489; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_17 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-858 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-858 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e401e88cde5527bbf5e982539c2f304d. XX FH Key Location/Qualifiers FH FT source 1..858 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #461, Oregon" FT /haplotype="Pm-APX_17" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>858 FT /gene="APX" FT mRNA join(<1..202,423..481,586..>858) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,423..481,586..607) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEH6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEH6" FT /protein_id="AAV92258.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 608..>858 FT /gene="APX" XX SQ Sequence 858 BP; 231 A; 147 C; 189 G; 291 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctag ttttttgtgg gagatgaaaa accatgataa 300 atcatatagc cattttgagt agtttgtcat tggtgatgat ctgcctcaaa tccttcattg 360 atcctgtgtt gttatggatt tgtggcaatc tcattggaat aaactccact gtttgtaaac 420 aggatgagga tgccttcttt gctgattatg cggaagccca cctgaagctc tctgaacttg 480 ggtaggttaa cactattact tttttttctc ttgtataatc aaaatatttt tggtcaaatg 540 caacttgata ttcatgtagt aaagactgca tctctcactt ttcaggtttg cggaggagta 600 tcagtaaaca caaagccttg aactgcatac agtgttataa atcataaacc taaaatgtca 660 agcacagaac agcatctgta gaagagccac gagagttgat gttgtgtaaa agttatccta 720 ataacagtgt cagaaattag cccctggcag tatgcatatt gtgtggtcca gtttatttct 780 attttgaata tgcctcactg tttttggtta gagagttgac tgtgttgatg agggagtgct 840 ttgtttctaa cgctgaag 858 // ID AY832490; SV 1; linear; genomic DNA; STD; PLN; 856 BP. XX AC AY832490; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_18 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-856 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-856 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 8072474e702b5cfb22d0c47395d18a07. XX FH Key Location/Qualifiers FH FT source 1..856 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #472, Oregon" FT /haplotype="Pm-APX_18" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>856 FT /gene="APX" FT mRNA join(<1..202,421..479,584..>856) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,421..479,584..605) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEH6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEH6" FT /protein_id="AAV92259.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 606..>856 FT /gene="APX" XX SQ Sequence 856 BP; 227 A; 146 C; 191 G; 292 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctgg ttttttgtgg gagatgaaaa accatgataa 300 atcatagcca ttttgagtag tttgtcattg gtgatgatct gcctcaaatc cttcattgat 360 cctgtgttgt tatggatttg tggcaatctc attggaatga actccactgt ttgtaaacag 420 gatgaggatg ccttctttgc tgattatgcg gaagcccacc tgaagctctc tgaacttggg 480 taggttaaca ctattacttt tttttttctt gtataatcaa aatttttttg gtcaaatgca 540 acttgatatt catgtagtaa agactgcatc tctcactttt caggtttgcg gaggagtatc 600 agtaaacaca aagccttgaa ctgcatacag tgttataaat cataaaccta aaatgtcaag 660 cacagaacag catctgtaga agagccacga gagttgatgt tgtgtaaaag ttatcctaat 720 aacagtgtca gaaattagcc cctggcagta tgcatattgt gtggtccagt ttatttctat 780 tttgaatatg cctcactgtt tttggttaga gagttgactg tgttgatgag ggagtgcttt 840 gtttctaacg ctgaag 856 // ID AY832491; SV 1; linear; genomic DNA; STD; PLN; 854 BP. XX AC AY832491; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_19 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-854 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-854 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 33a3e39c325796492fe7e1bdb75816fb. XX FH Key Location/Qualifiers FH FT source 1..854 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #472, Oregon" FT /haplotype="Pm-APX_19" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>854 FT /gene="APX" FT mRNA join(<1..202,421..479,582..>854) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,421..479,582..603) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEF9" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEF9" FT /protein_id="AAV92260.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEGYQ" FT 3'UTR 604..>854 FT /gene="APX" XX SQ Sequence 854 BP; 225 A; 146 C; 192 G; 291 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctgg ttttttgtgg gagatgaaaa accatgataa 300 atcatagcca ttttgagtag tttgtcattg gtgatgatct gcctcaaatc cttcattgat 360 cctgtgttgt tatggatttg tggcaatctc attggaatga actccactgt ttgtaaacag 420 gatgaggatg ccttctttgc tgattatgcg gaagcccacc tgaagctctc tgaacttggg 480 taggttaaca cttacttttt tttttcttgt ataatcaaaa tttttttggt caaatgcaac 540 ttgatattca tgtagtaaag actgcatctc tcacttttca ggtttgcgga ggggtatcag 600 taaacacaaa gccttgaact gcatacagtg ttataaatca taaacctaaa atgtcaagca 660 cagaacagca tctgtagaag agccacgaga gttgatgttg tgtaaaagtt atcctaataa 720 cagtgtcaga aattagcccc tggcagtatg catattgtgt ggtccagttt atttctattt 780 tgaatatgcc tcactgtttt tggttagaga gttgactgtg ttgatgaggg agtgctttgt 840 ttctaacgct gaag 854 // ID AY832492; SV 1; linear; genomic DNA; STD; PLN; 858 BP. XX AC AY832492; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_20 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-858 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-858 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e401e88cde5527bbf5e982539c2f304d. XX FH Key Location/Qualifiers FH FT source 1..858 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #461, Oregon" FT /haplotype="Pm-APX_20" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>858 FT /gene="APX" FT mRNA join(<1..202,423..481,586..>858) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,423..481,586..607) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEH6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEH6" FT /protein_id="AAV92261.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 608..>858 FT /gene="APX" XX SQ Sequence 858 BP; 231 A; 147 C; 189 G; 291 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctag ttttttgtgg gagatgaaaa accatgataa 300 atcatatagc cattttgagt agtttgtcat tggtgatgat ctgcctcaaa tccttcattg 360 atcctgtgtt gttatggatt tgtggcaatc tcattggaat aaactccact gtttgtaaac 420 aggatgagga tgccttcttt gctgattatg cggaagccca cctgaagctc tctgaacttg 480 ggtaggttaa cactattact tttttttctc ttgtataatc aaaatatttt tggtcaaatg 540 caacttgata ttcatgtagt aaagactgca tctctcactt ttcaggtttg cggaggagta 600 tcagtaaaca caaagccttg aactgcatac agtgttataa atcataaacc taaaatgtca 660 agcacagaac agcatctgta gaagagccac gagagttgat gttgtgtaaa agttatccta 720 ataacagtgt cagaaattag cccctggcag tatgcatatt gtgtggtcca gtttatttct 780 attttgaata tgcctcactg tttttggtta gagagttgac tgtgttgatg agggagtgct 840 ttgtttctaa cgctgaag 858 // ID AY832493; SV 1; linear; genomic DNA; STD; PLN; 856 BP. XX AC AY832493; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_21 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-856 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-856 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; d014881b80655aeb1024967d17cda361. XX FH Key Location/Qualifiers FH FT source 1..856 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-APX_21" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>856 FT /gene="APX" FT mRNA join(<1..202,421..479,584..>856) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,421..479,584..605) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEH6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEH6" FT /protein_id="AAV92262.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 606..>856 FT /gene="APX" XX SQ Sequence 856 BP; 226 A; 146 C; 191 G; 293 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctgg ttttttgtgg gagatgaaaa accatgataa 300 atcatagcca ttttgagtag tttgtcattg gtgatgatct gcctcaaatc cttcattgat 360 cctgtgttgt tatggatttg tggcaatctc attggaatga actccactgt ttgtaaacag 420 gatgaggatg ccttctttgc tgattatgcg gaagcccacc tgaagctctc tgaacttggg 480 taggttaaca ctattacttt tttttttctt gtataatcaa attttttttg gtcaaatgca 540 acttgatatt catgtagtaa agactgcatc tctcactttt caggtttgcg gaggagtatc 600 agtaaacaca aagccttgaa ctgcatacag tgttataaat cataaaccta aaatgtcaag 660 cacagaacag catctgtaga agagccacga gagttgatgt tgtgtaaaag ttatcctaat 720 aacagtgtca gaaattagcc cctggcagta tgcatattgt gtggtccagt ttatttctat 780 tttgaatatg cctcactgtt tttggttaga gagttgactg tgttgatgag ggagtgcttt 840 gtttctaacg ctgaag 856 // ID AY832494; SV 1; linear; genomic DNA; STD; PLN; 850 BP. XX AC AY832494; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_22 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-850 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-850 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 3816c92b9da0baf35454be1300c45cc5. XX FH Key Location/Qualifiers FH FT source 1..850 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-APX_22" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>850 FT /gene="APX" FT mRNA join(<1..202,421..479,584..>850) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,421..479,584..599) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEF6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEF6" FT /protein_id="AAV92263.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEE" FT 3'UTR 600..>850 FT /gene="APX" XX SQ Sequence 850 BP; 225 A; 144 C; 189 G; 292 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctgg ttttttgtgg gagatgaaaa accatgataa 300 atcatagcca ttttgagtag tttgtcattg gtgatgatct gcctcaaatc cttcattgat 360 cctgtgttgt tatggatttg tggcaatctc attggaatga actccactgt ttgtaaacag 420 gatgaggatg ccttctttgc tgattatgcg gaagcccacc tgaagctctc tgaacttggg 480 taggttaaca ctattacttt tttttttctt gtataatcaa aatatttttg gtcaaatgca 540 acttgatatt catgtagtaa agtctgcatc tctcactttt caggtttgcg gaggagtaaa 600 cacaaagcct tgaactgcat acagtgttta taaatcataa acctaaaatg tcaagcacag 660 aacatcatct gtagaagagc caggagagtt gatgttgtgt aaaagttatc ctaatatcag 720 tgtcagaaat agcccctggc agtatgcata ttgtttggtc cagtttattt ctattttgaa 780 tatgcctcac tgtatttggt tagagagttg actgtgttga tgagggagtg ctttgtttct 840 aacgctgaag 850 // ID AY832495; SV 1; linear; genomic DNA; STD; PLN; 856 BP. XX AC AY832495; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_23 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-856 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-856 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 8072474e702b5cfb22d0c47395d18a07. XX FH Key Location/Qualifiers FH FT source 1..856 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-APX_23" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>856 FT /gene="APX" FT mRNA join(<1..202,421..479,584..>856) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,421..479,584..605) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEH6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEH6" FT /protein_id="AAV92264.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 606..>856 FT /gene="APX" XX SQ Sequence 856 BP; 227 A; 146 C; 191 G; 292 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctgg ttttttgtgg gagatgaaaa accatgataa 300 atcatagcca ttttgagtag tttgtcattg gtgatgatct gcctcaaatc cttcattgat 360 cctgtgttgt tatggatttg tggcaatctc attggaatga actccactgt ttgtaaacag 420 gatgaggatg ccttctttgc tgattatgcg gaagcccacc tgaagctctc tgaacttggg 480 taggttaaca ctattacttt tttttttctt gtataatcaa aatttttttg gtcaaatgca 540 acttgatatt catgtagtaa agactgcatc tctcactttt caggtttgcg gaggagtatc 600 agtaaacaca aagccttgaa ctgcatacag tgttataaat cataaaccta aaatgtcaag 660 cacagaacag catctgtaga agagccacga gagttgatgt tgtgtaaaag ttatcctaat 720 aacagtgtca gaaattagcc cctggcagta tgcatattgt gtggtccagt ttatttctat 780 tttgaatatg cctcactgtt tttggttaga gagttgactg tgttgatgag ggagtgcttt 840 gtttctaacg ctgaag 856 // ID AY832496; SV 1; linear; genomic DNA; STD; PLN; 858 BP. XX AC AY832496; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_24 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-858 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-858 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e401e88cde5527bbf5e982539c2f304d. XX FH Key Location/Qualifiers FH FT source 1..858 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-APX_24" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>858 FT /gene="APX" FT mRNA join(<1..202,423..481,586..>858) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,423..481,586..607) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEH6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEH6" FT /protein_id="AAV92265.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 608..>858 FT /gene="APX" XX SQ Sequence 858 BP; 231 A; 147 C; 189 G; 291 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctag ttttttgtgg gagatgaaaa accatgataa 300 atcatatagc cattttgagt agtttgtcat tggtgatgat ctgcctcaaa tccttcattg 360 atcctgtgtt gttatggatt tgtggcaatc tcattggaat aaactccact gtttgtaaac 420 aggatgagga tgccttcttt gctgattatg cggaagccca cctgaagctc tctgaacttg 480 ggtaggttaa cactattact tttttttctc ttgtataatc aaaatatttt tggtcaaatg 540 caacttgata ttcatgtagt aaagactgca tctctcactt ttcaggtttg cggaggagta 600 tcagtaaaca caaagccttg aactgcatac agtgttataa atcataaacc taaaatgtca 660 agcacagaac agcatctgta gaagagccac gagagttgat gttgtgtaaa agttatccta 720 ataacagtgt cagaaattag cccctggcag tatgcatatt gtgtggtcca gtttatttct 780 attttgaata tgcctcactg tttttggtta gagagttgac tgtgttgatg agggagtgct 840 ttgtttctaa cgctgaag 858 // ID AY832497; SV 1; linear; genomic DNA; STD; PLN; 856 BP. XX AC AY832497; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_013d1 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-856 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-856 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e4bd28a1cd70a3e59aa0f4a0c8f131d3. XX FH Key Location/Qualifiers FH FT source 1..856 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-APX_013d1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>856 FT /gene="APX" FT mRNA join(<1..202,421..479,584..>856) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,421..479,584..605) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEH6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEH6" FT /protein_id="AAV92266.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 606..>856 FT /gene="APX" XX SQ Sequence 856 BP; 227 A; 146 C; 191 G; 292 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc ttttacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctgg ttttttgtgg gagatgaaaa accatgataa 300 atcatagcca ttttgagtag tttgtcattg gtgatgatct gcctcaaatc tttcattgat 360 cctgtgttgt tatggatttg tggcaatctc attggaatga actccactgt ttgtaaacag 420 gatgaggatg ccttctttgc tgattatgcg gaagcccacc tgaagctctc tgaacttggg 480 taggttaaca ctattacttt tttttctctt gtataatcaa aatatttttg gtcaaatgca 540 acttgatatt catgtagtaa agactgcatc tctcactttt caggtttgcg gaggagtatc 600 agtaaacaca aagccttgaa ctgctaacag tgttataaat cataaaccta aaatgtcaag 660 cacagaacag catctgtaga agagccacga gagttgatgt tgtgtaaaag ttatcctaat 720 aacagtgtca gaaattagcc cctggcagta tgcatattgt gtggtccagt ttatttctat 780 tttgaatatg cctcactgtt tttggttaga gagttgactg tgttgatgag ggagtgcttt 840 gtttctaacg ctgaag 856 // ID AY832498; SV 1; linear; genomic DNA; STD; PLN; 863 BP. XX AC AY832498; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_013d2 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-863 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-863 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 0fc470292e8db84a84b3336ea251717b. XX FH Key Location/Qualifiers FH FT source 1..863 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-APX_013d2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>863 FT /gene="APX" FT mRNA join(<1..202,421..479,584..>863) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,421..479,584..605) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEG7" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEG7" FT /protein_id="AAV92267.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEREGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 606..>863 FT /gene="APX" XX SQ Sequence 863 BP; 230 A; 149 C; 193 G; 291 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagag 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc ttttacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctgg ttttttgtgg gagatgaaaa accatgataa 300 atcatagcca ttttgagtag tttgtcattg gtgatgatct gcctcaaatc tttcattgat 360 cctgtgttgt tatggatttg tggcaatctc attggaatga actccactgt ttgtaaacag 420 gatgaggatg ccttctttgc tgattatgcg gaagcccacc tgaagctctc tgaacttggg 480 taggttaaca ctattacttt tttttctctt gtataatcaa aaaaaatttg gtcaaatgca 540 acttgatatt catgtagtaa agactgcatc tctcactttt caggttcgcg gaggagtatc 600 agtaaacaca aagccttgaa ctgcatacag tgttataaat cataaaccta aaatgtcaag 660 cacagaacag catctgtaga agagccacga gagttgatgt tgtgtaaaag ttatcctaat 720 aacagtgtca gaaattagcc cctggcagta tgcatattgt cacttgtgtg gtccagttta 780 tttctatttt gaatatgcct cactgttttt ggttagagag ttgactgtgt tgatgaggga 840 gtgctttgtt tctaacgctg aag 863 // ID AY832499; SV 1; linear; genomic DNA; STD; PLN; 858 BP. XX AC AY832499; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_412m1 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-858 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-858 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e401e88cde5527bbf5e982539c2f304d. XX FH Key Location/Qualifiers FH FT source 1..858 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone, Oregon" FT /haplotype="Pm-APX_412m1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>858 FT /gene="APX" FT mRNA join(<1..202,423..481,586..>858) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,423..481,586..607) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEH6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEH6" FT /protein_id="AAV92268.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 608..>858 FT /gene="APX" XX SQ Sequence 858 BP; 231 A; 147 C; 189 G; 291 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctag ttttttgtgg gagatgaaaa accatgataa 300 atcatatagc cattttgagt agtttgtcat tggtgatgat ctgcctcaaa tccttcattg 360 atcctgtgtt gttatggatt tgtggcaatc tcattggaat aaactccact gtttgtaaac 420 aggatgagga tgccttcttt gctgattatg cggaagccca cctgaagctc tctgaacttg 480 ggtaggttaa cactattact tttttttctc ttgtataatc aaaatatttt tggtcaaatg 540 caacttgata ttcatgtagt aaagactgca tctctcactt ttcaggtttg cggaggagta 600 tcagtaaaca caaagccttg aactgcatac agtgttataa atcataaacc taaaatgtca 660 agcacagaac agcatctgta gaagagccac gagagttgat gttgtgtaaa agttatccta 720 ataacagtgt cagaaattag cccctggcag tatgcatatt gtgtggtcca gtttatttct 780 attttgaata tgcctcactg tttttggtta gagagttgac tgtgttgatg agggagtgct 840 ttgtttctaa cgctgaag 858 // ID AY832500; SV 1; linear; genomic DNA; STD; PLN; 856 BP. XX AC AY832500; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-APX_412m2 ascorbate DE peroxidase (APX) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-856 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-856 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 8072474e702b5cfb22d0c47395d18a07. XX FH Key Location/Qualifiers FH FT source 1..856 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone, Oregon" FT /haplotype="Pm-APX_412m2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>856 FT /gene="APX" FT mRNA join(<1..202,421..479,584..>856) FT /gene="APX" FT /product="ascorbate peroxidase" FT CDS join(<1..202,421..479,584..605) FT /codon_start=2 FT /gene="APX" FT /product="ascorbate peroxidase" FT /db_xref="GOA:Q5MEH6" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR002207" FT /db_xref="InterPro:IPR010255" FT /db_xref="UniProtKB/TrEMBL:Q5MEH6" FT /protein_id="AAV92269.1" FT /translation="SGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQ FT LPSDKALLEDPVFRSYVEKYAADEDAFFADYAEAHLKLSELGFAEEYQ" FT 3'UTR 606..>856 FT /gene="APX" XX SQ Sequence 856 BP; 227 A; 146 C; 191 G; 292 T; 0 other; ctctggtgcc cacaccttgg gtagatgtca caaggagcga tctggctttg agggagcatg 60 gacgtcgaat cctctgatat ttgacaattc ctatttcaag gaacttctta gtggagagaa 120 agaaggtttg cttcagcttc cttctgataa ggcattgttg gaggacccgg tcttccgatc 180 ttatgtcgaa aagtatgcag cggtatgtgc tattacattt tacatgtaaa ctttttgttt 240 ggaaattcaa tttcgagtac taattgctgg ttttttgtgg gagatgaaaa accatgataa 300 atcatagcca ttttgagtag tttgtcattg gtgatgatct gcctcaaatc cttcattgat 360 cctgtgttgt tatggatttg tggcaatctc attggaatga actccactgt ttgtaaacag 420 gatgaggatg ccttctttgc tgattatgcg gaagcccacc tgaagctctc tgaacttggg 480 taggttaaca ctattacttt tttttttctt gtataatcaa aatttttttg gtcaaatgca 540 acttgatatt catgtagtaa agactgcatc tctcactttt caggtttgcg gaggagtatc 600 agtaaacaca aagccttgaa ctgcatacag tgttataaat cataaaccta aaatgtcaag 660 cacagaacag catctgtaga agagccacga gagttgatgt tgtgtaaaag ttatcctaat 720 aacagtgtca gaaattagcc cctggcagta tgcatattgt gtggtccagt ttatttctat 780 tttgaatatg cctcactgtt tttggttaga gagttgactg tgttgatgag ggagtgcttt 840 gtttctaacg ctgaag 856 // ID AY832501; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832501; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_1 early response to DE dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 20d8c0f6b35ce377d0b52d724babfa77. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-ERD15_1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE1" FT /protein_id="AAV92270.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCIER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 164 A; 116 C; 170 G; 195 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttacc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcatagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat tttttattta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832502; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832502; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_2 early response to DE dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 211ce48c6c25dd75b7f6b689c5deb9f8. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-ERD15_2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE7" FT /protein_id="AAV92271.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 163 A; 118 C; 170 G; 194 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat tttttattta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832503; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832503; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_3 early response to DE dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 211ce48c6c25dd75b7f6b689c5deb9f8. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-ERD15_3" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE7" FT /protein_id="AAV92272.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 163 A; 118 C; 170 G; 194 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat tttttattta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832504; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832504; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_4 early response to DE dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 211ce48c6c25dd75b7f6b689c5deb9f8. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-ERD15_4" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE7" FT /protein_id="AAV92273.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 163 A; 118 C; 170 G; 194 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat tttttattta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832505; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832505; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_5 early response to DE dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 85bf2ffbd2a92ac4e416bca8c6316a1d. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-ERD15_5" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE7" FT /protein_id="AAV92274.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 162 A; 118 C; 170 G; 195 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat ttttttttta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832506; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832506; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_6 early response to DE dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 211ce48c6c25dd75b7f6b689c5deb9f8. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #422, Washington" FT /haplotype="Pm-ERD15_6" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE7" FT /protein_id="AAV92275.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 163 A; 118 C; 170 G; 194 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat tttttattta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832507; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832507; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_7 early response to DE dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 211ce48c6c25dd75b7f6b689c5deb9f8. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-ERD15_7" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE7" FT /protein_id="AAV92276.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 163 A; 118 C; 170 G; 194 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat tttttattta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832508; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832508; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_8 early response to DE dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 211ce48c6c25dd75b7f6b689c5deb9f8. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-ERD15_8" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE7" FT /protein_id="AAV92277.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 163 A; 118 C; 170 G; 194 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat tttttattta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832509; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832509; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_9 early response to DE dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 20d8c0f6b35ce377d0b52d724babfa77. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-ERD15_9" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE1" FT /protein_id="AAV92278.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCIER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 164 A; 116 C; 170 G; 195 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttacc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcatagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat tttttattta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832510; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832510; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_10 early response DE to dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 211ce48c6c25dd75b7f6b689c5deb9f8. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-ERD15_10" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE7" FT /protein_id="AAV92279.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 163 A; 118 C; 170 G; 194 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat tttttattta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832511; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832511; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_11 early response DE to dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 211ce48c6c25dd75b7f6b689c5deb9f8. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-ERD15_11" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE7" FT /protein_id="AAV92280.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 163 A; 118 C; 170 G; 194 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat tttttattta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832512; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832512; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_12 early response DE to dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 85bf2ffbd2a92ac4e416bca8c6316a1d. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-ERD15_12" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE7" FT /protein_id="AAV92281.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 162 A; 118 C; 170 G; 195 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat ttttttttta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832513; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832513; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_13 early response DE to dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 211ce48c6c25dd75b7f6b689c5deb9f8. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-ERD15_13" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE7" FT /protein_id="AAV92282.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 163 A; 118 C; 170 G; 194 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat tttttattta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832514; SV 1; linear; genomic DNA; STD; PLN; 646 BP. XX AC AY832514; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_14 early response DE to dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-646 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-646 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; c4dc02abfdf41626fe2c4b0765cee451. XX FH Key Location/Qualifiers FH FT source 1..646 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-ERD15_14" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,579..>646) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,579..>646) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MED0" FT /protein_id="AAV92283.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLNDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DVIHHSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 579..>646 FT /number=2 XX SQ Sequence 646 BP; 163 A; 118 C; 170 G; 195 T; 0 other; tttgaaagtg ttgagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcggga aagttatgag acgctcaacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgtga 360 tacatcattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg atatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgataa tttcttattt atttgcagac tcgaatgaga gagagaagga 600 agttgtgctg ctgaaatctc tgaacgggaa accctgcaaa ccgaaa 646 // ID AY832515; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832515; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_15 early response DE to dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 211ce48c6c25dd75b7f6b689c5deb9f8. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-ERD15_15" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE7" FT /protein_id="AAV92284.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 163 A; 118 C; 170 G; 194 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat tttttattta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832516; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832516; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_16 early response DE to dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 211ce48c6c25dd75b7f6b689c5deb9f8. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-ERD15_16" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE7" FT /protein_id="AAV92285.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 163 A; 118 C; 170 G; 194 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat tttttattta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832517; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832517; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_17 early response DE to dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 85bf2ffbd2a92ac4e416bca8c6316a1d. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #461, Oregon" FT /haplotype="Pm-ERD15_17" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE7" FT /protein_id="AAV92286.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 162 A; 118 C; 170 G; 195 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat ttttttttta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832518; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832518; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_19 early response DE to dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 07451aa958aced1355a05e77f07175be. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #472, Oregon" FT /haplotype="Pm-ERD15_19" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE7" FT /protein_id="AAV92287.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 162 A; 118 C; 171 G; 194 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaagggg aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat tttttattta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832519; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832519; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_20 early response DE to dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 211ce48c6c25dd75b7f6b689c5deb9f8. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #461, Oregon" FT /haplotype="Pm-ERD15_20" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE7" FT /protein_id="AAV92288.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 163 A; 118 C; 170 G; 194 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat tttttattta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832520; SV 1; linear; genomic DNA; STD; PLN; 646 BP. XX AC AY832520; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_21 early response DE to dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-646 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-646 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 1a39eaeb30d5ccf0d9ddc2a5f100f307. XX FH Key Location/Qualifiers FH FT source 1..646 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-ERD15_21" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,579..>646) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,579..>646) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MED0" FT /protein_id="AAV92289.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLNDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DVIHHSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 579..>646 FT /number=2 XX SQ Sequence 646 BP; 165 A; 117 C; 169 G; 195 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcggga aagttatgag acgctcaacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgtga 360 tacatcattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg atatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgataa tttcttattt atttgcagac tcgaatgaga gagagaagga 600 agttgtgctg ctgaaatctt tgaacgggaa accctgcaaa ccgaaa 646 // ID AY832521; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832521; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_22 early response DE to dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 211ce48c6c25dd75b7f6b689c5deb9f8. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-ERD15_22" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE7" FT /protein_id="AAV92290.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 163 A; 118 C; 170 G; 194 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat tttttattta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832522; SV 1; linear; genomic DNA; STD; PLN; 646 BP. XX AC AY832522; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_23 early response DE to dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-646 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-646 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; c9f037a7eb0c5a2ccacb0368e8d4cf05. XX FH Key Location/Qualifiers FH FT source 1..646 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-ERD15_23" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,579..>646) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,579..>646) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MED0" FT /protein_id="AAV92291.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLNDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DVIHHSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 579..>646 FT /number=2 XX SQ Sequence 646 BP; 163 A; 117 C; 170 G; 196 T; 0 other; tttgaaagtg ttgagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcggga aagttatgag acgctcaacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgtga 360 tacatcattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg atatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgataa ttttttattt atttgcagac tcgaatgaga gagagaagga 600 agttgtgctg ctgaaatctc tgaacgggaa accctgcaaa ccgaaa 646 // ID AY832523; SV 1; linear; genomic DNA; STD; PLN; 646 BP. XX AC AY832523; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_24 early response DE to dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-646 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-646 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 367032c8f347e7d5b02fefcea31446dd. XX FH Key Location/Qualifiers FH FT source 1..646 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-ERD15_24" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,579..>646) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,579..>646) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MED0" FT /protein_id="AAV92292.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLNDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DVIHHSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 579..>646 FT /number=2 XX SQ Sequence 646 BP; 162 A; 118 C; 171 G; 195 T; 0 other; tttgaaagtg ttgagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcggga aagttatgag acgctcaacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgtga 360 tacatcattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg atatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatga tttcttattt atttgcagac tcgaatgaga gagagaagga 600 agttgtgctg ctgaaatctc tgaacgggaa accctgcaaa ccgaaa 646 // ID AY832524; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832524; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_013d1 early DE response to dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 211ce48c6c25dd75b7f6b689c5deb9f8. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-ERD15_013d1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE7" FT /protein_id="AAV92293.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 163 A; 118 C; 170 G; 194 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat tttttattta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832525; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832525; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_013d2 early DE response to dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 211ce48c6c25dd75b7f6b689c5deb9f8. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-ERD15_013d2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE7" FT /protein_id="AAV92294.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 163 A; 118 C; 170 G; 194 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat tttttattta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832526; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832526; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_412m1 early DE response to dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 211ce48c6c25dd75b7f6b689c5deb9f8. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone, Oregon" FT /haplotype="Pm-ERD15_412m1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE7" FT /protein_id="AAV92295.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 163 A; 118 C; 170 G; 194 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat tttttattta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832527; SV 1; linear; genomic DNA; STD; PLN; 645 BP. XX AC AY832527; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-ERD15_412m2 early DE response to dehydration 15-like protein gene, exons 1, 2 and partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-645 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-645 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 211ce48c6c25dd75b7f6b689c5deb9f8. XX FH Key Location/Qualifiers FH FT source 1..645 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone, Oregon" FT /haplotype="Pm-ERD15_412m2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT mRNA join(<1..375,578..>645) FT /product="early response to dehydration 15-like protein" FT exon <1..375 FT /number=1 FT 5'UTR <1..41 FT CDS join(42..375,578..>645) FT /codon_start=1 FT /product="early response to dehydration 15-like protein" FT /note="Pm-ERD15-like" FT /db_xref="InterPro:IPR009818" FT /db_xref="InterPro:IPR040414" FT /db_xref="UniProtKB/TrEMBL:Q5MEE7" FT /protein_id="AAV92296.1" FT /translation="MAVTSRVSSTLNPNAPLFIPLAYRQVEDFSPEWWNLVQSSPWFRD FT YWLRESYETLDDAECFVDLFPETLEDTDEADEFSELESQLEEALMQCSTADEGYVCTER FT DAIHYSTDSNEREKEVVLLKSLNGKPCKPK" FT exon 578..>645 FT /number=2 XX SQ Sequence 645 BP; 163 A; 118 C; 170 G; 194 T; 0 other; tttgaaagtg ataagattta gggtttcatg tgttgttccc catggccgtt acttctcgag 60 ttagttctac tctgaacccc aacgcgccgt tgtttatacc tttggcttac cggcaggtgg 120 aggatttctc accggaatgg tggaatcttg tacagtcttc gccgtggttc cgtgactact 180 ggctgcgaga aagttatgag acgctcgacg acgcagaatg ctttgtagat ctgtttccgg 240 aaacccttga agataccgac gaggccgatg agttctcgga actggaatcc cagcttgagg 300 aagcgctaat gcagtgttcg acggcagatg agggctatgt ctgcacagaa agggatgcga 360 tacattattc tacaggtgaa gcctaaagaa aatctcagtt tttgggttaa tatgcgcgta 420 tttaggctgg ccgagtatat gtagtcttta atctcgttta ggtttcgttg tctttttgtc 480 tgataacagt attaaaggag aaagaagggg acatcaaacc gtttaactga ttttagtctt 540 tgaaggttag ggtttgatat tttttattta tttgcagact cgaatgagag agagaaggaa 600 gttgtgctgc tgaaatctct gaacgggaag ccctgcaaac cgaaa 645 // ID AY832528; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832528; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_1 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 3744f59d301fe0a6737f31642f51e1b0. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-F3H1_1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92297.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 77 C; 89 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtacccgc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaagt gtgtccgccc cggatgtgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832529; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832529; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_2 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 91ee6561c8aee00ebf9785ff0dd4bd62. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-F3H1_2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEB8" FT /protein_id="AAV92298.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNEKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 76 C; 89 G; 83 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtacccgc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgaga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaggt gtgtccgccc cggatttgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832530; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832530; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_3 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 3744f59d301fe0a6737f31642f51e1b0. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-F3H1_3" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92299.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 77 C; 89 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtacccgc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaagt gtgtccgccc cggatgtgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832531; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832531; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_4 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 0223df0f67bf0cf6d6455cef055e8227. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-F3H1_4" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92300.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 78 C; 89 G; 81 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtacccgc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aaccgaatcg atgtacattt 300 ctataaaagt gtgtccgccc cggatgtgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832532; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832532; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_5 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 91ee6561c8aee00ebf9785ff0dd4bd62. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-F3H1_5" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEB8" FT /protein_id="AAV92301.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNEKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 76 C; 89 G; 83 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtacccgc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgaga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaggt gtgtccgccc cggatttgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832533; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832533; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_6 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 3744f59d301fe0a6737f31642f51e1b0. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #422, Washington" FT /haplotype="Pm-F3H1_6" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92302.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 77 C; 89 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtacccgc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaagt gtgtccgccc cggatgtgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832534; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832534; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_7 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 3bdc5803aebbbbad26d7028aea9fe8e7. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-F3H1_7" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEB6" FT /protein_id="AAV92303.1" FT /translation="AVVNSNSSRLSIATFQNPAQDAIVYPLDGVVKEAEGEKCFMEEPI FT TFAQLYTRKMSRDIELALQKKMAKLAEQEQLKDQNSSGTDEKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 114 A; 74 C; 92 G; 85 T; 0 other; agcagttgtg aattcaaata gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 ggacgccatc gtgtacccgc tggatggagt tgtgaaggag gcggaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgccctc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga actgatgaga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctttaaaagt gtgtgcgccc cggatgtgtc tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832535; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832535; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_8 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 3744f59d301fe0a6737f31642f51e1b0. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-F3H1_8" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92304.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 77 C; 89 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtacccgc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaagt gtgtccgccc cggatgtgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832536; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832536; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_9 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; b8bbc518da0833fbf454a091f76adc56. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-F3H1_9" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92305.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 78 C; 88 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtaccccc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaagt gtgtccgccc cggatgtgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832537; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832537; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_10 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 3744f59d301fe0a6737f31642f51e1b0. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-F3H1_10" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92306.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 77 C; 89 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtacccgc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaagt gtgtccgccc cggatgtgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832538; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832538; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_11 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; b8bbc518da0833fbf454a091f76adc56. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-F3H1_11" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92307.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 78 C; 88 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtaccccc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaagt gtgtccgccc cggatgtgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832539; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832539; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_12 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; b8bbc518da0833fbf454a091f76adc56. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-F3H1_12" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92308.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 78 C; 88 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtaccccc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaagt gtgtccgccc cggatgtgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832540; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832540; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_13 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 3744f59d301fe0a6737f31642f51e1b0. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-F3H1_13" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92309.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 77 C; 89 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtacccgc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaagt gtgtccgccc cggatgtgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832541; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832541; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_14 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; b8bbc518da0833fbf454a091f76adc56. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-F3H1_14" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92310.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 78 C; 88 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtaccccc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaagt gtgtccgccc cggatgtgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832542; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832542; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_15 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 3744f59d301fe0a6737f31642f51e1b0. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-F3H1_15" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92311.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 77 C; 89 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtacccgc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaagt gtgtccgccc cggatgtgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832543; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832543; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_16 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 91ee6561c8aee00ebf9785ff0dd4bd62. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-F3H1_16" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEB8" FT /protein_id="AAV92312.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNEKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 76 C; 89 G; 83 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtacccgc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgaga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaggt gtgtccgccc cggatttgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832544; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832544; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_17 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; b8bbc518da0833fbf454a091f76adc56. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #461, Oregon" FT /haplotype="Pm-F3H1_17" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92313.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 78 C; 88 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtaccccc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaagt gtgtccgccc cggatgtgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832545; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832545; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_18 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; b8bbc518da0833fbf454a091f76adc56. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #472, Oregon" FT /haplotype="Pm-F3H1_18" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92314.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 78 C; 88 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtaccccc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaagt gtgtccgccc cggatgtgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832546; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832546; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_19 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 3744f59d301fe0a6737f31642f51e1b0. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #472, Oregon" FT /haplotype="Pm-F3H1_19" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92315.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 77 C; 89 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtacccgc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaagt gtgtccgccc cggatgtgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832547; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832547; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_20 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; b8bbc518da0833fbf454a091f76adc56. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #461, Oregon" FT /haplotype="Pm-F3H1_20" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92316.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 78 C; 88 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtaccccc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaagt gtgtccgccc cggatgtgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832548; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832548; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_21 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 3744f59d301fe0a6737f31642f51e1b0. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-F3H1_21" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92317.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 77 C; 89 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtacccgc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaagt gtgtccgccc cggatgtgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832549; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832549; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_22 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; b744a498830764e0f83acfd63cd4282a. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-F3H1_22" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEB8" FT /protein_id="AAV92318.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNEKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 76 C; 90 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtacccgc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgaga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaggt gtgtccgccc cggatgtgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832550; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832550; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_23 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; b8bbc518da0833fbf454a091f76adc56. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-F3H1_23" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92319.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 78 C; 88 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtaccccc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaagt gtgtccgccc cggatgtgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832551; SV 1; linear; genomic DNA; STD; PLN; 364 BP. XX AC AY832551; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_24 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-364 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-364 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 871e3247408e215bdf5eb466acaf7d45. XX FH Key Location/Qualifiers FH FT source 1..364 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-F3H1_24" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>364 FT /gene="F3H1" FT mRNA <1..>364 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92320.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>364 FT /gene="F3H1" XX SQ Sequence 364 BP; 117 A; 76 C; 89 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtacccgc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaagt gtgtccgccc ggatgtgtat atgttcatat tttctcatat atgagaagat 360 atta 364 // ID AY832552; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832552; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_013d1 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; b8bbc518da0833fbf454a091f76adc56. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-F3H1_013d1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92321.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 78 C; 88 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtaccccc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaagt gtgtccgccc cggatgtgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832553; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832553; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_013d2 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 3744f59d301fe0a6737f31642f51e1b0. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-F3H1_013d2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92322.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 77 C; 89 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtacccgc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaagt gtgtccgccc cggatgtgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832554; SV 1; linear; genomic DNA; STD; PLN; 365 BP. XX AC AY832554; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_412m1 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-365 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-365 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 3744f59d301fe0a6737f31642f51e1b0. XX FH Key Location/Qualifiers FH FT source 1..365 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone, Oregon" FT /haplotype="Pm-F3H1_412m1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>365 FT /gene="F3H1" FT mRNA <1..>365 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92323.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>365 FT /gene="F3H1" XX SQ Sequence 365 BP; 117 A; 77 C; 89 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtacccgc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaagt gtgtccgccc cggatgtgta tatgttcata ttttctcata tatgagaaga 360 tatta 365 // ID AY832555; SV 1; linear; genomic DNA; STD; PLN; 364 BP. XX AC AY832555; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 2) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-F3H1_412m2 flavanone DE 3-hydroxylase 1 (F3H1) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-364 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-364 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 871e3247408e215bdf5eb466acaf7d45. XX FH Key Location/Qualifiers FH FT source 1..364 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone, Oregon" FT /haplotype="Pm-F3H1_412m2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>364 FT /gene="F3H1" FT mRNA <1..>364 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT CDS <1..271 FT /codon_start=2 FT /gene="F3H1" FT /product="flavanone 3-hydroxylase 1" FT /db_xref="InterPro:IPR027443" FT /db_xref="UniProtKB/TrEMBL:Q5MEC0" FT /protein_id="AAV92324.1" FT /translation="AVVNSNSSRLSIATFQNPAQNAIVYPLDGVVKEAKGEKCFMEEPI FT TFAQLYTRKMSRDIELARQKKMAKLAEQEQLKDQNSSGPNAKIN" FT 3'UTR 272..>364 FT /gene="F3H1" XX SQ Sequence 364 BP; 117 A; 76 C; 89 G; 82 T; 0 other; agcagttgtg aattcaaaca gcagcaggct gtcgattgcg acatttcaga atccagcgca 60 gaacgccatc gtgtacccgc tggatggagt tgtgaaggag gcgaaaggcg agaagtgctt 120 catggaggaa cccatcactt tcgctcagct gtacaccaga aagatgagcc gagacatcga 180 gctcgcccgc cagaagaaga tggccaaact tgctgagcag gaacagttga aagatcagaa 240 ttcatcagga cctaatgcga agattaacta aacaaacata aatcgaatcg atgtacattt 300 ctataaaagt gtgtccgccc ggatgtgtat atgttcatat tttctcatat atgagaagat 360 atta 364 // ID AY832556; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832556; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-EF1A_1 translation DE elongation factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 6bd150e0ed8641fb4035f8915799917e. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-EF1A_1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME93" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME93" FT /protein_id="AAV92325.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 271 A; 196 C; 285 G; 320 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggat atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatacaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggagaaa ggatattaat 1020 aatttctgtt actctgtgtt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832557; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832557; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-EF1A_2 translation DE elongation factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 2562ecae6441e3eb7d6a63f46dba2ff7. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-EF1A_2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME93" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME93" FT /protein_id="AAV92326.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 270 A; 196 C; 285 G; 321 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgct cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggac atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatacaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggaggaa ggatattaat 1020 aatttctgtt actctgtttt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832558; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832558; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-EF1A_3 translation DE elongation factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 9438d7479993d48d86cd29fc83b99da7. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-EF1A_3" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME93" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME93" FT /protein_id="AAV92327.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 271 A; 195 C; 285 G; 321 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggat atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatacaag tgattgggaa tggaggagtt 780 tgtaccgtat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggagaaa ggatattaat 1020 aatttctgtt actctgtgtt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832559; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832559; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-EF1A_4 translation DE elongation factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 6bd150e0ed8641fb4035f8915799917e. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-EF1A_4" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME93" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME93" FT /protein_id="AAV92328.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 271 A; 196 C; 285 G; 320 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggat atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatacaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggagaaa ggatattaat 1020 aatttctgtt actctgtgtt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832560; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832560; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-EF1A_5 translation DE elongation factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 41f693d880b119f7994499c4d6068346. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-EF1A_5" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME93" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME93" FT /protein_id="AAV92329.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 271 A; 195 C; 284 G; 322 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agtttcttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggac atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga tcctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatacaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggagaaa ggatattaat 1020 aatttctgtt actctgtttt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832561; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832561; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-EF1A_6 translation DE elongation factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 2562ecae6441e3eb7d6a63f46dba2ff7. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #422, Washington" FT /haplotype="Pm-EF1A_6" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME93" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME93" FT /protein_id="AAV92330.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 270 A; 196 C; 285 G; 321 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgct cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggac atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatacaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggaggaa ggatattaat 1020 aatttctgtt actctgtttt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832562; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832562; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-EF1A_7 translation DE elongation factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 5b225cb761a8f0b4d4aac450e80dbb9c. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-EF1A_7" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME93" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME93" FT /protein_id="AAV92331.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 270 A; 196 C; 286 G; 320 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggac atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatagaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggaggaa ggatattaat 1020 aatttctgtt actctgtttt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832563; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832563; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-EF1A_8 translation DE elongation factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; de0302404c905943fe941537d4fee092. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Vail breeding zone #242, Washington" FT /haplotype="Pm-EF1A_8" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME93" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME93" FT /protein_id="AAV92332.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 270 A; 197 C; 285 G; 320 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggac atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatacaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggaggaa ggatattaat 1020 aatttctgtt actctgtttt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832564; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832564; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-EF1A_9 translation DE elongation factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 2fc39483eaebe06d7a5e56d73a605e17. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-EF1A_9" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME93" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME93" FT /protein_id="AAV92333.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 269 A; 196 C; 286 G; 321 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggac atgcgtcaga 660 cggttgctgt tggagttatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatgcaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggaggaa ggatattaat 1020 aatttctgtt actctgtttt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832565; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832565; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-EF1A_10 translation DE elongation factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 5b225cb761a8f0b4d4aac450e80dbb9c. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-EF1A_10" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME93" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME93" FT /protein_id="AAV92334.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 270 A; 196 C; 286 G; 320 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggac atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatagaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggaggaa ggatattaat 1020 aatttctgtt actctgtttt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832566; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832566; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-EF1A_11 translation DE elongation factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 6bd150e0ed8641fb4035f8915799917e. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-EF1A_11" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME93" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME93" FT /protein_id="AAV92335.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 271 A; 196 C; 285 G; 320 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggat atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatacaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggagaaa ggatattaat 1020 aatttctgtt actctgtgtt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832567; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832567; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-EF1A_12 translation DE elongation factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; bc81a9ea1abb415d311c7440adbc6aa4. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Twin Harbors breeding zone #241, Washington" FT /haplotype="Pm-EF1A_12" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME93" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME93" FT /protein_id="AAV92336.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 271 A; 196 C; 285 G; 320 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggac atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatagaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggagaaa ggatattaat 1020 aatttctgtt actctgtttt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832568; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832568; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-EF1A_14 translation DE elongation factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 27ce947fa5fb4e30bf4d5fc75d3a09b0. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-EF1A_14" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME93" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME93" FT /protein_id="AAV92337.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 272 A; 196 C; 284 G; 320 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaaa gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggat atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatacaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggagaaa ggatattaat 1020 aatttctgtt actctgtgtt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832569; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832569; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-EF1A_15 translation DE elongation factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 9e275f6574bbd54c4cc991744cbec548. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-EF1A_15" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME93" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME93" FT /protein_id="AAV92338.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 271 A; 196 C; 284 G; 321 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggat atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatacaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggagaaa ggatattaat 1020 aatttctgtt actctgtttt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832570; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832570; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-EF1A_16 translation DE elongation factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; e0041e8c549618046c110299ef584122. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Longview breeding zone #041, Washington" FT /haplotype="Pm-EF1A_16" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME93" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME93" FT /protein_id="AAV92339.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 271 A; 197 C; 284 G; 320 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggac atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatacaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggagaaa ggatattaat 1020 aatttctgtt actctgtttt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832571; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832571; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-EF1A_17 translation DE elongation factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 7a91078889bfbcd30042000ca942450a. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #461, Oregon" FT /haplotype="Pm-EF1A_17" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME93" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME93" FT /protein_id="AAV92340.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 272 A; 197 C; 285 G; 318 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagcagcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggac atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatacaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac actttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggaggaa ggatattaat 1020 aatttctgtt actctgtttt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832572; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832572; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii haplotype Pm-EF1A_18 translation elongation factor-1 DE alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii (Douglas-fir) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 7cccd1d2aa9e1ef1214a749d7142b07a. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #472, Oregon" FT /haplotype="Pm-EF1A_18" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:3357" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME78" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME78" FT /protein_id="AAV92341.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 270 A; 195 C; 285 G; 322 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agtttcttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggac atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga tcctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatacaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggaggaa ggatattaat 1020 aatttctgtt actctgtttt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832573; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832573; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-EF1A_19 translation DE elongation factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; ed6740b1d7e9737c7a8b508005279cdd. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #472, Oregon" FT /haplotype="Pm-EF1A_19" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME93" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME93" FT /protein_id="AAV92342.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 270 A; 196 C; 285 G; 321 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggac atgcgtcaga 660 cggttgctgt tggagttatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatgcaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggagaaa ggatattaat 1020 aatttctgtt actctgtttt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832574; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832574; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-EF1A_20 translation DE elongation factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; bcfe7bb94957664defe1d0c4821315dc. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone #461, Oregon" FT /haplotype="Pm-EF1A_20" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME93" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME93" FT /protein_id="AAV92343.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 271 A; 196 C; 284 G; 321 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgct cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggac atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatacaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggagaaa ggatattaat 1020 aatttctgtt actctgtttt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832575; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832575; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-EF1A_21 translation DE elongation factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 6bd150e0ed8641fb4035f8915799917e. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-EF1A_21" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME93" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME93" FT /protein_id="AAV92344.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 271 A; 196 C; 285 G; 320 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggat atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatacaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggagaaa ggatattaat 1020 aatttctgtt actctgtgtt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832576; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832576; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-EF1A_22 translation DE elongation factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; bc81a9ea1abb415d311c7440adbc6aa4. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-EF1A_22" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME93" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME93" FT /protein_id="AAV92345.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 271 A; 196 C; 285 G; 320 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggac atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatagaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggagaaa ggatattaat 1020 aatttctgtt actctgtttt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832577; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832577; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-EF1A_23 translation DE elongation factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 2562ecae6441e3eb7d6a63f46dba2ff7. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-EF1A_23" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME93" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME93" FT /protein_id="AAV92346.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 270 A; 196 C; 285 G; 321 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgct cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggac atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatacaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggaggaa ggatattaat 1020 aatttctgtt actctgtttt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832578; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832578; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-EF1A_24 translation DE elongation factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 8394e7a20fa6737d603940aa01825dc6. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-EF1A_24" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME93" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME93" FT /protein_id="AAV92347.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 271 A; 197 C; 284 G; 320 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggac atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatacaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagagcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggaggaa ggatattaat 1020 aatttctgtt actctgtttt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832579; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832579; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii haplotype Pm-EF1A_013d1 translation elongation DE factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii (Douglas-fir) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 6bd150e0ed8641fb4035f8915799917e. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-EF1A_013d1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:3357" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME78" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME78" FT /protein_id="AAV92348.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 271 A; 196 C; 285 G; 320 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggat atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatacaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggagaaa ggatattaat 1020 aatttctgtt actctgtgtt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832580; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832580; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii haplotype Pm-EF1A_013d2 translation elongation DE factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii (Douglas-fir) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 5e18578b63094d038c5b970408f7830d. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii" FT /mol_type="genomic DNA" FT /country="USA:Coos Bay breeding zone #071, Oregon" FT /haplotype="Pm-EF1A_013d2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:3357" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME78" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME78" FT /protein_id="AAV92349.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 270 A; 196 C; 285 G; 321 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggac atgcgtcaga 660 cggttgctgt tggagttatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatacaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggaggaa ggatattaat 1020 aatttctgtt actctgtttt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832581; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832581; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii haplotype Pm-EF1A_412m1 translation elongation DE factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii (Douglas-fir) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; de0302404c905943fe941537d4fee092. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone, Oregon" FT /isolation_source="maternal parent 412-2 used for QTL FT mapping" FT /haplotype="Pm-EF1A_412m1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:3357" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME78" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME78" FT /protein_id="AAV92350.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 270 A; 197 C; 285 G; 320 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggac atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatacaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggaggaa ggatattaat 1020 aatttctgtt actctgtttt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832582; SV 1; linear; genomic DNA; STD; PLN; 1072 BP. XX AC AY832582; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Pseudotsuga menziesii haplotype Pm-EF1A_412m2 translation elongation DE factor-1 alpha (EF1A) gene, partial cds. XX KW . XX OS Pseudotsuga menziesii (Douglas-fir) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-1072 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-1072 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (18-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 6bd150e0ed8641fb4035f8915799917e. XX FH Key Location/Qualifiers FH FT source 1..1072 FT /organism="Pseudotsuga menziesii" FT /mol_type="genomic DNA" FT /country="USA:Springfield breeding zone, Oregon" FT /isolation_source="maternal parent 412-2 used for QTL FT mapping" FT /haplotype="Pm-EF1A_412m2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:3357" FT gene <1..>1072 FT /gene="EF1A" FT mRNA <1..>1072 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT CDS <1..746 FT /codon_start=3 FT /gene="EF1A" FT /product="translation elongation factor-1 alpha" FT /db_xref="GOA:Q5ME78" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:Q5ME78" FT /protein_id="AAV92351.1" FT /translation="MIERSTNLDWYKGPTLLDALDQVSEPKRPSDKPLRLPLQDVYKIG FT GIGTVPVGRVETGVIKPGTIVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA FT VKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFSEI FT MTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA FT VGVIKAVEKKDPTGAKVTKAAAKKK" FT 3'UTR 747..>1072 FT /gene="EF1A" XX SQ Sequence 1072 BP; 271 A; 196 C; 285 G; 320 T; 0 other; acatgattga gcgctcgacc aaccttgatt ggtacaaggg tccaactctc ttggatgccc 60 ttgaccaggt ttcagagccc aagcgacctt cagacaagcc tctgaggttg cctcttcagg 120 atgtttacaa gattggtggt attggaactg tgcctgttgg tcgtgtggaa actggtgtca 180 tcaagccagg taccattgtt acctttggtc ctaccgggct gacaactgag gttaagtccg 240 ttgagatgca tcatgaagct ctgcaggagg cattgcctgg tgacaatgtg ggattcaacg 300 tgaagaatgt tgctgttaag gatctgaaac gtggttatgt ggcatctgat tccaagaatg 360 atccagccaa ggaagctgcc aactttaccg ctcaggttat tattatgaat catccaggac 420 agattggaaa tggttatgcc cctgtattgg attgccacac ttgccacatt gcggtcaagt 480 tttctgagat catgaccaag gttgacaggc gttctggcaa ggagctggag aaggaaccca 540 agttccttaa gaacggagat gctgggtttg tcaagatgat tccaaccaaa ccaatggttg 600 tggaaacctt tgccgagtat cctccattgg gtcgttttgc agtgagggat atgcgtcaga 660 cggttgctgt tggagtcatt aaagctgttg aaaagaagga ccctactggt gcaaaggtca 720 ccaaggcagc tgctaagaag aagtgaatat tgaatacaag tgattgggaa tggaggagtt 780 tgtaccgcat tacgcgtgct tgcatctttc tctattttcc tgatggtatg ttagtagagt 840 tagtttatca aatgcagaat tgggtgcttg atcggcggtg gcagagttta cattattttc 900 cagtaagtac tctttagtag cttagggcaa gttgattgag atttcgtatt ttcggggaaa 960 tcatcagttt gtctgcattg ctaatatgca gttggagtgt gagggagaaa ggatattaat 1020 aatttctgtt actctgtgtt ttattttaaa tcatgtattg ccgtacatat gg 1072 // ID AY832583; SV 1; linear; genomic DNA; STD; PLN; 2564 BP. XX AC AY832583; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-AT1_1 alpha tubulin 1 DE (AT1) gene, complete cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-2564 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-2564 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 1b8241139b4c268f4d32d1e565e3c599. XX FH Key Location/Qualifiers FH FT source 1..2564 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-AT1_1" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>2564 FT /gene="AT1" FT mRNA join(<1..192,611..845,1256..1626,1815..>2564) FT /gene="AT1" FT /product="alpha tubulin 1" FT exon <1..192 FT /gene="AT1" FT /number=1 FT 5'UTR <1..99 FT /gene="AT1" FT CDS join(100..192,611..845,1256..1626,1815..2471) FT /codon_start=1 FT /gene="AT1" FT /product="alpha tubulin 1" FT /db_xref="GOA:Q5ME66" FT /db_xref="InterPro:IPR000217" FT /db_xref="InterPro:IPR002452" FT /db_xref="InterPro:IPR003008" FT /db_xref="InterPro:IPR008280" FT /db_xref="InterPro:IPR017975" FT /db_xref="InterPro:IPR018316" FT /db_xref="InterPro:IPR023123" FT /db_xref="InterPro:IPR036525" FT /db_xref="InterPro:IPR037103" FT /db_xref="UniProtKB/TrEMBL:Q5ME66" FT /protein_id="AAV92352.1" FT /translation="MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGG FT DDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFA FT RGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGK FT KSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERP FT TYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA FT YHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRT FT IQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY FT AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGEEGDEGDEY" FT exon 611..845 FT /gene="AT1" FT /number=2 FT exon 1256..1626 FT /gene="AT1" FT /number=3 FT exon 1815..>2564 FT /gene="AT1" FT /number=4 FT 3'UTR 2472..>2564 FT /gene="AT1" XX SQ Sequence 2564 BP; 577 A; 558 C; 581 G; 848 T; 0 other; tctttgcaaa cgccttcttc atccgatttc ctacgtcccg ccgttctttt gctgtttcta 60 ctccgtttta gggttttttt cccttcacca ccagcgaaaa tgagagagtg catctcgatc 120 cacatcggcc aggccggtat ccaggttgga aacgcttgct gggagctgta ctgtctcgag 180 catggtattc aggtactgtg attttccttt aattgttaac aatggctagg tttttctgtg 240 taagatctgg gtctgttgat taattaggct agcgtgtata tttgctagtg atttttctca 300 gatctggtcg gatatatgtg ttttattcaa atgcctttag tattgcggtt aaaggctaag 360 aaatgcttgc gttgtccgtt cctttcgtaa ttttaagcat tttcccgcgg atccggtttc 420 aaattttagg tttacataaa aaagatccgt ctgtgtggaa ttagcttgct atagcgcgtc 480 ttttttgttt tctgggctta gttctgcttc tgatatttgt tattagtttt tgaacttgtc 540 gatttgatct acattgtatg cattgagggt tttgttctta ctagccttgt attttctgga 600 tctggttcag cctgatggcc agatgcccag cgataagact gtcggcgggg gagacgatgc 660 cttcaacact ttctttagcg aaactggagc cggaaagcat gttccccgtg ctgtatttgt 720 agatttggag ccgactgtca ttgatgaggt gcggactggt acttaccgtc agcttttcca 780 tcctgagcag ctcatcagcg gcaaggaaga tgcggccaac aactttgccc gtggtcatta 840 caccagtaag tgtgttttcg gctttataaa gatattttcg cggtctttgg aatatcaaac 900 cctcacgtgc agtattttag ctcgatttta acccatacag tttattttct gcctttccaa 960 attgattcaa aagtcggtgg atttctatat gaagtttcac tgttcataaa tctatagccc 1020 tagagcttga tattgaggct cttatctgat attttcaaat gtacatatgc ccctccgaac 1080 tacattattt actctgcatt agcataggtt tttaggtttc ttggttttcc tagaaacatt 1140 ctttgagtag ggacctgcgt atgttaatgt gtaaaattag atctactagt tcagatcttg 1200 agtctttctt tgtgaaatgt agtttgtcat tgagatttta tgtctcttat ttcagttggc 1260 aaagaaattg tggacctctg cctggaccgt atccggaagc tggctgacaa ctgcacgggt 1320 ctacaaggat tcctcgtctt caacgcagtc ggtggaggaa ctggttctgg actcggctca 1380 cttctcctgg aacgtctttc agtggactac ggtaaaaagt ccaaacttgg attcactgtg 1440 tatccatcac cacaggtttc aacctcggtc gtagagcctt acaacagcgt tctctctacg 1500 cactctcttc tggaacacac cgatgtggcc gttctcctcg ataatgaagc gatttacgac 1560 atctgccgtc gttctttgga cattgaacgc cccacataca caaatctgaa ccgactcgtt 1620 tcacaggtac gttaaaagcc ctaaaaatta tgttctgtta tctgtttctt gagtagtcat 1680 tgttaacctt atttatgtct gttcgccctc ttaaaagtga ggtagcattg cttcaattta 1740 acggtttccg agatttatta catctaaatt acattttgta accatttcga ggctcacttt 1800 atgtgatttt gcaggtcatt tcttcattga ccgcgtccct ccgtttcgac ggtgccttga 1860 atgtcgatgt aacagagttc caaacaaact tggtcccgta tcctcgtatc cactttatgc 1920 tttcgtcata cgcccccgtg atctctgctg aaaaggccta ccatgaacag ctttctgtgg 1980 cagaaattac aaacagcgcg ttcgagccat cctccatgat ggccaagtgc gatcctcgcc 2040 acggcaaata catggcctgc tgtctcatgt accgtggaga tgtcgtgccc aaggatgtta 2100 acgctgctgt cgcaaccatc aagacaaaga gaaccattca gtttgttgat tggtgtccta 2160 ccggattcaa gtgtggaatc aactaccagc ctccaactgt tgtccctgga ggcgatctcg 2220 caaaggttca gagagccgtc tgcatgatct ccaactcgac cagtgttgca gaggtcttct 2280 cgagaattga ccataagttc gatctcatgt acgccaagcg agcattcgtt cattggtatg 2340 tgggcgaggg aatggaagag ggcgagtttt ctgaagcccg tgaggatctg gctgctctcg 2400 aaaaggatta cgaggaggtt ggcgctgagt ctgcagaggg agaggaaggt gatgaaggag 2460 acgaatactg aggatctgtt ttatgtttcc cgcattctgg ttttcttaga ttgtgttgtt 2520 ttggacttcc atgtcgagaa cagtgctttg tttatcgtgt tgtt 2564 // ID AY832584; SV 1; linear; genomic DNA; STD; PLN; 2576 BP. XX AC AY832584; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-AT1_2 alpha tubulin 1 DE (AT1) gene, complete cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-2576 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-2576 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 1ced6c4c1317d66fbcee67dd6ad069c8. XX FH Key Location/Qualifiers FH FT source 1..2576 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-AT1_2" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>2576 FT /gene="AT1" FT mRNA join(<1..192,622..856,1266..1636,1827..>2576) FT /gene="AT1" FT /product="alpha tubulin 1" FT exon <1..192 FT /gene="AT1" FT /number=1 FT 5'UTR <1..99 FT /gene="AT1" FT CDS join(100..192,622..856,1266..1636,1827..2483) FT /codon_start=1 FT /gene="AT1" FT /product="alpha tubulin 1" FT /db_xref="GOA:Q5ME66" FT /db_xref="InterPro:IPR000217" FT /db_xref="InterPro:IPR002452" FT /db_xref="InterPro:IPR003008" FT /db_xref="InterPro:IPR008280" FT /db_xref="InterPro:IPR017975" FT /db_xref="InterPro:IPR018316" FT /db_xref="InterPro:IPR023123" FT /db_xref="InterPro:IPR036525" FT /db_xref="InterPro:IPR037103" FT /db_xref="UniProtKB/TrEMBL:Q5ME66" FT /protein_id="AAV92353.1" FT /translation="MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGG FT DDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFA FT RGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGK FT KSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERP FT TYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA FT YHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRT FT IQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY FT AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGEEGDEGDEY" FT exon 622..856 FT /gene="AT1" FT /number=2 FT exon 1266..1636 FT /gene="AT1" FT /number=3 FT exon 1827..>2576 FT /gene="AT1" FT /number=4 FT 3'UTR 2484..>2576 FT /gene="AT1" XX SQ Sequence 2576 BP; 578 A; 554 C; 583 G; 861 T; 0 other; tctttgcaaa cgccttcttc atccgatttc ctacgtcccg ccgttctttt gctgttttta 60 ctctgtttta gggttttttt cccttcacca ccagcgaaaa tgagagagtg catctcgatc 120 cacatcggcc aggccggtat ccaggttgga aacgcttgct gggagctgta ctgtctcgag 180 catggtattc aggtactgtg attttacttt aattattaac aatggctagg tttttctgtg 240 taagatctgg gtctgttgat taattaggct agtgtttata tttgctagtg atttttctca 300 gatctggtcg gatatatgtg ttttattcaa atgcatttca aatacctttt gttttgcggt 360 taaagactaa gaaatgcttg cgttgttcat ttctttcgta attttaagca ttttcccgcg 420 gatccggttt caaattttag gtttacataa aaaagatccg tctgtgtgga attagcttcc 480 tatagcgcgt cttttttgtt ttctgggctt agttctgctt ctgatatttg ttattagttt 540 ttgaacttgt cgatttgatt tacattgcat gcattgaggg ttttgttctt actagccttg 600 tattttctgg atctggttca gcctgatggc cagatgccca gcgataagac tgtcggcggc 660 ggagacgatg ccttcaacac tttctttagc gaaactggcg ccggaaagca tgttccccgt 720 gctgtatttg tagatttgga gccgactgtc attgatgagg tgcggactgg tacttaccgt 780 cagcttttcc atcctgagca gctcatcagc ggcaaggaag atgcggccaa caactttgcc 840 cgtggtcatt acaccagtaa gtgcgctttc ggctttataa agatattttc gcggtctttg 900 gaatatcaaa ccctcacgtg cagtatttta gctcgatttt aacccataca gtttattttc 960 tgcctttcca aattgattca aaagttggtg gatttctatt tgaagtttca ctgttcataa 1020 atctatagcc cagagcttga tattgaggtt cctatctgat attttcaaat gtacatatgc 1080 ccctccgaac tacattattt actctgcatt agcataggtt tttaggtttc ttggttttcc 1140 tagaaacatt ctttgagtag ggacctgcgt atgttaatgt gtaaaattag atctactagt 1200 tcagatcttg agtctttctt tgtgaaatgt agtttgccat tgagatttga tgtctcttat 1260 ttcagttggc aaagaaattg tggacctctg cctggaccgt atccggaagc tggctgacaa 1320 ctgcacgggt ctacaaggat ttctcgtctt caacgcagtc ggtggaggaa ctggttctgg 1380 actcggctca cttctcctgg aacgtctttc agtggattac ggtaaaaagt ccaaacttgg 1440 attcactgta tatccatcac cacaggtttc aacctcggtc gttgagcctt acaacagcgt 1500 tctctctacg cactctcttc tggaacacac cgatgtggcc gttctcctcg ataatgaagc 1560 gatttacgac atttgccgtc gttctttgga tattgaacgc cctacataca caaatctgaa 1620 ccgactcgtg tcacaggtac gttaaaagcc ctaaaaattc tgttgtgtta tctgtttctt 1680 gagtagtcat tgttaacctt atttatgtct gttcgccctc ttaaaagtga ggtagcattg 1740 cttcaatttg gcggcgtttc cgagatttat tgcatctaaa ttacattttg taaccatttc 1800 gaggctcact ttatgtgatt ttgcaggtca tttcttcatt gaccgcgtcc ctccgtttcg 1860 acggtgcctt gaatgtcgat gtaacagagt tccaaacaaa cttggtcccg tatcctcgta 1920 tccactttat gctttcgtca tacgcccccg tgatctctgc tgaaaaggcc taccatgaac 1980 agctttctgt ggcagaaatt acaaacagcg cgttcgagcc atcctccatg atggccaagt 2040 gcgatcctcg ccacggcaaa tacatggcct gctgtctcat gtaccgtgga gatgtcgtgc 2100 ccaaggatgt taacgctgct gtcgcaacca tcaagacaaa gagaaccatt cagtttgttg 2160 attggtgtcc taccggattc aagtgtggaa tcaactacca gcctccaact gttgtccctg 2220 gaggcgatct cgcaaaggtt cagagagccg tctgcatgat ctccaactcg accagtgttg 2280 cagaggtgtt ctcgagaatt gaccataagt tcgatctcat gtacgccaag cgagcattcg 2340 ttcattggta tgtgggcgag ggaatggaag agggcgagtt ttctgaagcc cgtgaggatc 2400 tggctgctct cgaaaaggat tacgaggagg ttggcgctga gtctgcagag ggagaggaag 2460 gtgatgaagg agacgagtac tgaggatctg ttttatgttt cccgcattct ggtattctta 2520 gattgtgttg ttttggactt ccatgtcgag aacagtgctt tgtttatcgt gttgtt 2576 // ID AY832585; SV 1; linear; genomic DNA; STD; PLN; 2564 BP. XX AC AY832585; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-AT1_3 alpha tubulin 1 DE (AT1) gene, complete cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-2564 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-2564 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; d47e80f40c94e073b4646dec4acf1327. XX FH Key Location/Qualifiers FH FT source 1..2564 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-AT1_3" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>2564 FT /gene="AT1" FT mRNA join(<1..191,610..844,1254..1624,1815..>2564) FT /gene="AT1" FT /product="alpha tubulin 1" FT exon <1..191 FT /gene="AT1" FT /number=1 FT 5'UTR <1..98 FT /gene="AT1" FT CDS join(99..191,610..844,1254..1624,1815..2471) FT /codon_start=1 FT /gene="AT1" FT /product="alpha tubulin 1" FT /db_xref="GOA:Q5ME66" FT /db_xref="InterPro:IPR000217" FT /db_xref="InterPro:IPR002452" FT /db_xref="InterPro:IPR003008" FT /db_xref="InterPro:IPR008280" FT /db_xref="InterPro:IPR017975" FT /db_xref="InterPro:IPR018316" FT /db_xref="InterPro:IPR023123" FT /db_xref="InterPro:IPR036525" FT /db_xref="InterPro:IPR037103" FT /db_xref="UniProtKB/TrEMBL:Q5ME66" FT /protein_id="AAV92354.1" FT /translation="MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGG FT DDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFA FT RGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGK FT KSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERP FT TYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA FT YHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRT FT IQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY FT AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGEEGDEGDEY" FT exon 610..844 FT /gene="AT1" FT /number=2 FT exon 1254..1624 FT /gene="AT1" FT /number=3 FT exon 1815..>2564 FT /gene="AT1" FT /number=4 FT 3'UTR 2472..>2564 FT /gene="AT1" XX SQ Sequence 2564 BP; 575 A; 549 C; 579 G; 861 T; 0 other; tctttgcaaa cgccttcttc atccgatttc ctacgtcccg ccgttctttt gctgttttta 60 ctctgtttta ggtttttttc ccttcaccac cagcgaaaat gagagagtgc atctcgatcc 120 acatcggcca ggccggtatc caggttggaa acgcttgctg ggagctgtac tgtctcgagc 180 atggtattca ggtactgtga ttttccttta attgttaaca atggctaggt ttttctgtgt 240 aagatctggt tctgttgatt aattaggcta gtgtttatat ttgctagtga tttttctcag 300 atctggtcgg atatatgtgt tttattcaaa tacctattgt attgcggtta aagactaaga 360 aatgcttgcg ttgtccgttt ctttcgtaat tttaagcatt ttcccgcgga tccggtttca 420 aattttaggt ttacatcaaa aagatccgtc tgtgtggaat tagcttgcta tagcgcgtct 480 tttttgtttt ctgggcttag ttctgcttct gatatttgtt attagttttt gaacttgtcg 540 atttgattta cattgcatgc attgagggtt ttgttcttac tagccttgta ttttctggat 600 ctggttcagc ctgatggcca gatgcccagc gataagactg tcggcggcgg agacgatgcc 660 ttcaacactt tctttagcga aactggagcc ggaaagcatg ttccccgcgc tgtatttgta 720 gatttggagc cgactgtcat tgatgaggtg cggactggta cttaccgtca gcttttccat 780 cctgagcagc tcatcagcgg caaggaagat gcggccaaca actttgcccg tggtcattac 840 accagtaagt gtgttttcgg ctttataaag atattttcgc ggtctttgga atatcaaacc 900 ctcacgtgca gtattttagc tcgattttaa cccatacagt ttattttctg cctttccaaa 960 ttgattcaaa agttggtgga tttctatatg aagtttcact gttcataaat ctatagccca 1020 gagcttgata ttgaggttcc tatctgatat tttcaaatgt acatatgccc ctccgaacta 1080 cattatttac tctgcattag cataggtttt taggtttctt ggttttccta gaaacattct 1140 ttgagtaggg acctgcgtat gttaatgtgt aaaattagat ctactagttc agatcttgag 1200 tctttctttg tgaaatgtag tttgtcattg agatttgatg tctcttattt cagttggcaa 1260 agaaattgtg gacctctgcc tggaccgtat ccggaagctg gctgacaact gcacgggtct 1320 acaaggattt ctcgtcttca acgcagtcgg tggaggaact ggttctggac tcggctcact 1380 tctcctggaa cgtctttcag tggactacgg taaaaagtcc aaacttggat tcactgtata 1440 tccatcacca caggtttcaa cctcggtcgt tgagccttac aacagcgttc tctctacgca 1500 ctctcttctg gaacacaccg atgtggccgt tctcctcgat aatgaagcga tttacgacat 1560 ttgccgtcgt tctttggata ttgaacgccc tacatacaca aatctgaacc gactcgtttc 1620 acaggtatgt taaaagccct aaaaattctg ttgtgttatc tgtttcttga gtagtcattg 1680 tcaaccttat ttatgtctgt tcgccctctt aaaagtgagg tagcattgct tcaatttggc 1740 ggcgtttctg agatttatta catctaaatt acattttgta accatttcga ggctcacttt 1800 atgtgatttt gcaggtcatt tcttcattga ccgcgtccct ccgtttcgac ggtgccttga 1860 atgtcgatgt aacagagttc caaacaaact tggtcccgta tcctcgtatc cactttatgc 1920 tttcatcata tgcccccgtg atctctgctg aaaaggccta ccatgaacag ctttctgtgg 1980 cagaaattac aaacagcgct ttcgagccat cctccatgat ggccaagtgc gatcctcgcc 2040 acggcaaata catggcctgc tgtctcatgt accgtggaga tgtcgtgccc aaggatgtta 2100 atgctgctgt cgcaaccatc aagacaaaga gaaccattca gtttgttgat tggtgtccta 2160 ccggattcaa gtgtggaatc aactaccagc ctccaactgt tgtccctgga ggcgatctcg 2220 caaaggttca gagagccgtc tgcatgatct ccaactcgac cagtgttgca gaggtgttct 2280 cgagaattga ccataagttc gatctcatgt acgccaagcg agcattcgtt cattggtatg 2340 tgggcgaggg aatggaagag ggcgagtttt ctgaagcccg tgaggatctg gctgctctcg 2400 aaaaggatta cgaggaggtt ggcgctgagt ctgcagaggg agaggaaggt gatgaaggag 2460 acgagtactg aggatctgtt ttatgtttcc cgcattctgg ttttcttaga ttgtgttgtt 2520 ttggacttcc atgtcgagaa cagtgctttg tttatcgtgt tgtt 2564 // ID AY832586; SV 1; linear; genomic DNA; STD; PLN; 2576 BP. XX AC AY832586; XX DT 14-DEC-2004 (Rel. 82, Created) DT 27-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Pseudotsuga menziesii var. menziesii haplotype Pm-AT1_4 alpha tubulin 1 DE (AT1) gene, complete cds. XX KW . XX OS Pseudotsuga menziesii var. menziesii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Pseudotsuga. XX RN [1] RP 1-2576 RX DOI; 10.1534/genetics.105.044420. RX PUBMED; 16157674. RA Krutovsky K.V., Neale D.B.; RT "Nucleotide diversity and linkage disequilibrium in cold-hardiness- and RT wood quality-related candidate genes in Douglas fir"; RL Genetics 171(4):2029-2041(2005). XX RN [2] RP 1-2576 RA Krutovsky K.V., Neale D.B.; RT ; RL Submitted (19-NOV-2004) to the INSDC. RL Department of Plant Sciences, University of California, Institute of Forest RL Genetics, Pacific Southwest Research Station, One Shields Avenue, Davis, CA RL 95616, USA XX DR MD5; 4316dc5c1d3161b0894a3867fa1d6e61. XX FH Key Location/Qualifiers FH FT source 1..2576 FT /organism="Pseudotsuga menziesii var. menziesii" FT /variety="menziesii" FT /mol_type="genomic DNA" FT /country="USA:Cascade breeding zone #412, Washington" FT /haplotype="Pm-AT1_4" FT /dev_stage="haploid megagametophyte" FT /db_xref="taxon:278161" FT gene <1..>2576 FT /gene="AT1" FT mRNA join(<1..192,622..856,1266..1636,1827..>2576) FT /gene="AT1" FT /product="alpha tubulin 1" FT exon <1..192 FT /gene="AT1" FT /number=1 FT 5'UTR <1..99 FT /gene="AT1" FT CDS join(100..192,622..856,1266..1636,1827..2483) FT /codon_start=1 FT /gene="AT1" FT /product="alpha tubulin 1" FT /db_xref="GOA:Q5ME66" FT /db_xref="InterPro:IPR000217" FT /db_xref="InterPro:IPR002452" FT /db_xref="InterPro:IPR003008" FT /db_xref="InterPro:IPR008280" FT /db_xref="InterPro:IPR017975" FT /db_xref="InterPro:IPR018316" FT /db_xref="InterPro:IPR023123" FT /db_xref="InterPro:IPR036525" FT /db_xref="InterPro:IPR037103" FT /db_xref="UniProtKB/TrEMBL:Q5ME66" FT /protein_id="AAV92355.1" FT /translation="MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGG FT DDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFA FT RGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGK FT KSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERP FT TYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA FT YHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRT FT IQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY FT AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGEEGDEGDEY" FT exon 622..856 FT /gene="AT1" FT /number=2 FT exon 1266..1636 FT /gene="AT1" FT /number=3 FT exon 1827..>2576 FT /gene="AT1" FT /number=4 FT 3'UTR 2484..>2576 FT /gene="AT1" XX SQ Sequence 2576 BP; 578 A; 554 C; 582 G; 862 T; 0 other; tctttgcaaa cgccttcttc atccgatttc ctacgtcccg ccgttctttt gctgttttta 60 ctctgtttta gggttttttt cccttcacca ccagcgaaaa tgagagagtg catctcgatc 120 cacatcggcc aggccggtat ccaggttgga aacgcttgct gggagctgta ctgtctcgag 180 catggtattc aggtactgtg attttacttt aattattaac aatggctagg tttttctgtg 240 taagatctgg gtctgttgat taattaggct agtgtttata tttgctagtg atttttctca 300 gatctggtcg gatatatgtg ttttattcaa atgcatttca aatacctttt gttttgcggt 360 taaagactaa gaaatgcttg cgttgttcat ttctttcgta attttaagca ttttcccgcg 420 gatccggttt caaattttag gtttacataa aaaagatccg tctgtgtgga attagcttcc 480 tatagcgcgt cttttttgtt ttctgggctt agttctgctt ctgatatttg ttattagttt 540 ttgaacttgt cgatttgatt tacattgcat gcattgaggg ttttgttctt actagccttg 600 tattttctgg atctggttca gcctgatggc cagatgccca gcgataagac tgtcggcggc 660 ggagacgatg ccttcaacac tttctttagc gaaactggcg ccggaaagca tgttccccgt 720 gctgtatttg tagatttgga gccgactgtc attgatgagg tgcggactgg tacttaccgt 780 cagcttttcc atcctgagca gctcatcagc ggcaaggaag atgcggccaa caactttgcc 840 cgtggtcatt acaccagtaa gtgcgctttc ggctttataa agatattttc gcggtctttg 900 gaatatcaaa ccctcacgtg cagtatttta gctcgatttt aacccataca gtttattttc 960 tgcctttcca aattgattca aaagttggtg gatttctatt tgaagtttca ctgttcataa 1020 atctatagcc cagagcttga tattgaggtt cctatctgat attttcaaat gtacatatgc 1080 ccctccgaac tacattatt