ID AB000048; SV 1; linear; genomic DNA; STD; VRL; 2007 BP. XX AC AB000048; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 3) XX DE Feline panleukopenia virus gene for nonstructural protein 1, complete cds, DE isolate: 483. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-2007 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "Evolutionary pattern of feline panleukopenia virus differs from that of RT canine parvovirus"; RL Unpublished. XX DR MD5; ad2ee0be59f7e9c3bec41a8454c1b7de. XX FH Key Location/Qualifiers FH FT source 1..2007 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="483" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..2007 FT /product="nonstructural protein 1" FT /db_xref="GOA:P90484" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR021076" FT /db_xref="InterPro:IPR021972" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:P90484" FT /protein_id="BAA19009.1" FT /translation="MSGNQYTEEVMEGVNWLKKHAEDEAFSFVFKCDNVQLNGKDVRWN FT NYTKPIQNEELTSLIRGAQTAMDQTEEEEMDWESEVDSLAKKQVQTFDALIKKCLFEVF FT VSKNIEPNECVWFIQHEWGKDQGWHCHVLLHSKNLQQATGKWLRRQMNMYWSRWLVTLC FT SINLTPTEKIKLREIAEDSEWVTILTYRHKQTKKDYVKMVHFGNMIAYYFLTKKKIVHM FT TKESGYFLSTDSGWKFNFMKYQDRHTVSTLYTEQMKPETVETTVTTAQETKRGRIQTKK FT EVSIKCTLRDLVSKRVTSPEDWMMLQPDSYIEMMAQPGGENLLKNTLEICTLTLARTKT FT AFELILEKADNTKLTNFDLANSRTCQIFRMHGWNWIKVCHAIACVLNRQGGKRNTVLFH FT GPASTGKSIIAQAIAQAVGNVGCYNAANVNFPFNDCTNKNLIWVEEAGNFGQQVNQFKA FT ICSGQTIRIDQKGKGSKQIEPTPVIMTTNENITIVRIGCEERPEHTQPIRDRMLNIKLV FT CKLPGDFGLVDKEEWPLICAWLVKHGYQSTMANYTHHWGKVPEWDENWAEPKIQEGINS FT PGCKDLETQAASNPQSQDHVLTPLTPDVVDLALEPWSTPDTPIAETANQQSNQLGVTHK FT DVQASPTWSEIEADLRAIFTSEQLEEDFRDDLD" XX SQ Sequence 2007 BP; 766 A; 313 C; 404 G; 524 T; 0 other; atgtctggca accagtatac tgaggaagtt atggagggag taaattggtt aaagaaacat 60 gcagaagatg aagcattttc gtttgttttt aaatgtgaca acgtccaact aaatggaaag 120 gatgttcgct ggaacaacta taccaaacca attcaaaatg aagagctaac atctttaatt 180 agaggagcac aaacagcaat ggatcaaacc gaagaagaag aaatggactg ggaatcggaa 240 gttgatagtc tcgccaaaaa gcaagtacaa acttttgatg cattaattaa aaaatgtctt 300 tttgaagtct ttgtttctaa aaatatagaa ccaaatgaat gtgtttggtt tattcaacat 360 gaatggggaa aagatcaagg ctggcattgt catgttttac ttcatagtaa gaacttacaa 420 caagcaactg gtaaatggct acgcagacaa atgaatatgt attggagtag atggttggtg 480 actctttgtt cgataaattt aacaccaact gaaaagatta agctcagaga aattgcagaa 540 gatagtgaat gggtaactat attaacatac agacataagc aaacaaaaaa agactatgtt 600 aaaatggttc attttggaaa tatgatagca tattactttt taacaaagaa aaaaattgtc 660 cacatgacaa aagaaagtgg ctatttttta agtactgatt ctggttggaa atttaacttt 720 atgaagtatc aagacagaca tactgtcagc acactttaca ctgaacaaat gaaaccagaa 780 accgttgaaa ccacagtgac gacagcacag gaaacaaagc gcgggagaat tcaaactaaa 840 aaggaagtgt caatcaaatg tactttgcgg gacttggtta gtaaaagagt aacatcacct 900 gaagactgga tgatgttaca accagatagt tatattgaaa tgatggcaca accaggaggt 960 gaaaatctct taaaaaatac acttgaaatt tgtactttga ctttagcaag aacaaaaaca 1020 gcatttgaat taatacttga aaaagcagat aataccaaac taactaactt tgatcttgca 1080 aattctagaa catgtcaaat ttttagaatg cacggatgga attggattaa agtttgtcac 1140 gctatagcat gtgttttaaa tagacaaggt ggtaaaagaa atacagttct ttttcatgga 1200 ccagcaagta caggaaaatc tattattgct caagccatag cacaagctgt gggtaatgtt 1260 ggttgctata atgcagcaaa tgtaaatttt ccatttaatg actgtaccaa taaaaattta 1320 atttgggttg aagaagctgg taactttggt caacaagtta atcaatttaa agcaatttgt 1380 tctggacaaa caattagaat tgatcaaaaa ggtaaaggaa gtaagcaaat tgaaccaact 1440 ccagtaatta tgacaactaa tgaaaatata acaattgtaa gaattggatg tgaagaaaga 1500 cctgaacata cacaaccaat aagagacaga atgttgaaca ttaaattagt atgtaagctt 1560 ccaggagact ttggtttggt tgataaagaa gaatggcctt taatatgtgc atggttagtt 1620 aaacatggtt atcaatcaac catggctaac tacacacatc attggggaaa agtaccagag 1680 tgggatgaaa actgggcgga gcctaaaata caagaaggta taaattcacc aggttgcaaa 1740 gacttagaga cacaagcggc aagcaatcct cagagtcaag accacgttct aactcctctg 1800 actccggacg tagtggacct tgcactggaa ccgtggagta ctccagatac gcctattgca 1860 gaaactgcaa atcaacaatc aaaccaactt ggcgttactc acaaagacgt gcaagcgagt 1920 ccgacatggt ccgaaataga ggcagacctg agagccattt ttacttctga acaattggaa 1980 gaagattttc gagacgactt ggattaa 2007 // ID AB000049; SV 1; linear; genomic DNA; STD; VRL; 2007 BP. XX AC AB000049; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 3) XX DE Feline panleukopenia virus gene for nonstructural protein 1, complete cds, DE isolate: 94-1. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-2007 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "Evolutionary pattern of feline panleukopenia virus differs that of canine RT parvovirus"; RL Unpublished. XX DR MD5; 7e5bc5bdfc26dc2c28950c14a28f8a23. XX FH Key Location/Qualifiers FH FT source 1..2007 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="94-1" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..2007 FT /product="nonstructural protein 1" FT /db_xref="GOA:P90484" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR021076" FT /db_xref="InterPro:IPR021972" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:P90484" FT /protein_id="BAA19010.1" FT /translation="MSGNQYTEEVMEGVNWLKKHAEDEAFSFVFKCDNVQLNGKDVRWN FT NYTKPIQNEELTSLIRGAQTAMDQTEEEEMDWESEVDSLAKKQVQTFDALIKKCLFEVF FT VSKNIEPNECVWFIQHEWGKDQGWHCHVLLHSKNLQQATGKWLRRQMNMYWSRWLVTLC FT SINLTPTEKIKLREIAEDSEWVTILTYRHKQTKKDYVKMVHFGNMIAYYFLTKKKIVHM FT TKESGYFLSTDSGWKFNFMKYQDRHTVSTLYTEQMKPETVETTVTTAQETKRGRIQTKK FT EVSIKCTLRDLVSKRVTSPEDWMMLQPDSYIEMMAQPGGENLLKNTLEICTLTLARTKT FT AFELILEKADNTKLTNFDLANSRTCQIFRMHGWNWIKVCHAIACVLNRQGGKRNTVLFH FT GPASTGKSIIAQAIAQAVGNVGCYNAANVNFPFNDCTNKNLIWVEEAGNFGQQVNQFKA FT ICSGQTIRIDQKGKGSKQIEPTPVIMTTNENITIVRIGCEERPEHTQPIRDRMLNIKLV FT CKLPGDFGLVDKEEWPLICAWLVKHGYQSTMANYTHHWGKVPEWDENWAEPKIQEGINS FT PGCKDLETQAASNPQSQDHVLTPLTPDVVDLALEPWSTPDTPIAETANQQSNQLGVTHK FT DVQASPTWSEIEADLRAIFTSEQLEEDFRDDLD" XX SQ Sequence 2007 BP; 766 A; 311 C; 404 G; 526 T; 0 other; atgtctggca accagtatac tgaggaagtt atggagggag taaattggtt aaagaaacat 60 gcagaagatg aagcattttc gtttgttttt aaatgtgaca acgtccaact aaatggaaag 120 gatgttcgct ggaacaacta taccaaacca attcaaaatg aagagctaac atctttaatt 180 agaggagcac aaacagcaat ggatcaaacc gaagaagaag aaatggactg ggaatcggaa 240 gttgatagtc tcgccaaaaa gcaagtacaa acttttgatg cattaattaa aaaatgtctt 300 tttgaagtct ttgtttctaa aaatatagaa ccaaatgaat gtgtttggtt tattcaacat 360 gaatggggaa aagatcaagg ctggcattgt catgttttac ttcatagtaa gaacttacaa 420 caagcaactg gtaaatggct acgcagacaa atgaatatgt attggagtag atggttggtg 480 actctttgtt cgataaattt aacaccaact gaaaagatta agctcagaga aattgcagaa 540 gatagtgaat gggtaactat attaacatac agacataagc aaacaaaaaa agactatgtt 600 aaaatggttc attttggaaa tatgatagca tattactttt taacaaagaa aaaaattgtc 660 cacatgacaa aagaaagtgg ctatttttta agtactgatt ctggttggaa atttaacttt 720 atgaagtatc aagacagaca tactgtcagc acactttaca ctgaacaaat gaaaccagaa 780 accgttgaaa ccacagtgac gacagcacag gaaacaaagc gcgggagaat tcaaactaaa 840 aaggaagtgt caatcaaatg tactttgcgg gacttggtta gtaaaagagt aacatcacct 900 gaagactgga tgatgttaca accagatagt tatattgaaa tgatggcaca accaggaggt 960 gaaaatcttt taaaaaatac acttgaaatt tgtactttga ctttagcaag aacaaaaaca 1020 gcatttgaat taatacttga aaaagcagat aatactaaac taactaactt tgatcttgca 1080 aattctagaa catgtcaaat ttttagaatg cacggatgga attggattaa agtttgtcac 1140 gctatagcat gtgttttaaa tagacaaggt ggtaaaagaa atacagttct ttttcatgga 1200 ccagcaagta caggaaaatc tattattgct caagccatag cacaagctgt gggtaatgtt 1260 ggttgctata atgcagcaaa tgtaaatttt ccatttaatg actgtaccaa taaaaattta 1320 atttgggttg aagaagctgg taactttggt caacaagtta atcaatttaa agcaatttgt 1380 tctggacaaa caattagaat tgatcaaaaa ggtaaaggaa gtaagcaaat tgaaccaact 1440 ccagtaatta tgacaactaa tgaaaatata acaattgtaa gaattggatg tgaagaaaga 1500 cctgaacata cacaaccaat aagagacaga atgttgaaca ttaagttagt atgtaagctt 1560 ccaggagact ttggtttggt tgataaagaa gaatggcctt taatatgtgc atggttagtt 1620 aaacatggtt atcaatcaac catggctaac tacacacatc attggggaaa agtaccagag 1680 tgggatgaaa actgggcgga gcctaaaata caagaaggta taaattcacc aggttgcaaa 1740 gacttagaga cacaagcggc aagcaatcct cagagtcaag accacgttct aactcctctg 1800 actccggacg tagtggacct tgcactggaa ccgtggagta ctccagatac gcctattgca 1860 gaaactgcaa atcaacaatc aaaccaactt ggcgttactc acaaagacgt gcaagcgagt 1920 ccgacatggt ccgaaataga ggcagaccta agagccattt ttacttctga acaattggaa 1980 gaagattttc gagacgactt ggattaa 2007 // ID AB000050; SV 1; linear; genomic DNA; STD; VRL; 1755 BP. XX AC AB000050; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 4) XX DE Feline panleukopenia virus gene for capsid protein 2, complete cds, DE isolate: 94-1. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-1755 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "Evolutionary pattern of feline panleukopenia virus differs from that of RT canine parvovirus"; RL Unpublished. XX DR MD5; d4c32ff9d00f0b346302f1c827eab6fd. XX FH Key Location/Qualifiers FH FT source 1..1755 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="94-1" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..1755 FT /product="capsid protein 2" FT /db_xref="GOA:Q84372" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR036952" FT /db_xref="UniProtKB/TrEMBL:Q84372" FT /protein_id="BAA19011.1" FT /translation="MSDGAVQPDGGQPAVRNERATGSGNGSGGGGGGGSGGVGISTGTF FT NNQTEFKFLENGWVEITANSSRLVHLNMPESENYKRVVVNNMDKTAVKGNMALDDTHVQ FT IVTPWSLVDANAWGVWFNPGDWQLIVNTMSELHLVSFEQEIFNVVLKTVSESATQPPTK FT VYNNDLTASLMVALDSNNTMPFTPAAMRSETLGFYPWKPTIPTPWRYYFQWDRTLIPSH FT TGTSGTPTNVYHGTDPDDVQFYTIENSVPVHLLRTGDEFATGTFFFDCKPCRLTHTWQT FT NRALGLPPFLNSLPQSEGATNFGDIGVQQDKRRGVTQMGNTDYITEATIMRPAEVGYSA FT PYYSFEASTQGPFKTPIAAGRGGAQTDENQAADGDPRYAFGRQHGQKTTTTGETPERFT FT YIAHQDTGRYPEGDWIQNINFNLPVTNDNVLLPTDPIGGKTGINYTNIFNTYGPLTALN FT NVPPVYPNGQIWDKEFDTDLKPRLHVNAPFVCQNNCPGQLFVKVAPNLTNEYDPDASAN FT MSRIVTYSDFWWKGKLVFKAKLRASHTWNPIQQMSINVDNQFNYVPNNIGAMKIVYEKS FT QLAPRKLY" XX SQ Sequence 1755 BP; 618 A; 271 C; 346 G; 520 T; 0 other; atgagtgatg gagcagttca accagacggt ggtcaacctg ctgtcagaaa tgaaagagct 60 acaggatctg ggaacgggtc tggaggcggg ggtggtggtg gttctggggg tgtggggatt 120 tctacgggta ctttcaataa tcagacggaa tttaaatttt tggaaaacgg gtgggtggaa 180 atcacagcaa actcaagcag acttgtacat ttaaatatgc cagaaagtga aaattataaa 240 agagtagttg taaataatat ggataaaact gcagttaaag gaaatatggc tttagatgat 300 actcatgtac aaattgtaac accttggtca ttggttgatg caaatgcttg gggagtttgg 360 tttaatccag gagattggca actaattgtt aatactatga gtgagttgca tttagttagt 420 tttgaacaag aaatttttaa tgttgtttta aagactgttt cagaatctgc tactcagcca 480 ccaactaaag tttataataa tgatttaact gcatcattga tggttgcatt agatagtaat 540 aatactatgc catttactcc agcagctatg agatctgaga cattgggttt ttatccatgg 600 aaaccaacca taccaactcc atggagatat tattttcaat gggatagaac attaatacca 660 tctcatactg gaactagtgg cacaccaaca aatgtatatc atggtacaga tccagatgat 720 gttcaatttt atactattga aaattctgtg ccagtacact tactaagaac aggtgatgaa 780 tttgctacag gaacattttt ttttgattgt aaaccatgta gactaacaca tacatggcaa 840 acaaatagag cattgggctt accaccattt ttaaattctt tgcctcaatc tgaaggagct 900 actaactttg gtgatatagg agttcaacaa gataaaagac gtggtgtaac tcaaatggga 960 aatacagact atattactga agctactatt atgagaccag ctgaggttgg ttatagtgca 1020 ccatactatt cttttgaagc gtctacacaa gggccattta aaacacctat tgcagcagga 1080 cgggggggag cgcaaacaga tgaaaatcaa gcagcagatg gtgatccaag atatgcattt 1140 ggtagacaac atggtcaaaa aactactaca acaggagaaa cacctgagag atttacatat 1200 atagcacatc aagatacagg aagatatcca gaaggagatt ggattcaaaa tattaacttt 1260 aaccttcctg taacaaatga taatgtattg ctaccaacag atccaattgg aggtaaaaca 1320 ggaattaact atactaatat atttaatact tatggtcctt taactgcatt aaataatgta 1380 ccaccagttt atccaaatgg tcaaatttgg gataaagaat ttgatactga cttaaaacca 1440 agacttcatg taaatgcacc atttgtttgt cagaataatt gtcctggtca attatttgta 1500 aaagttgcgc ctaatttaac gaatgaatat gatcctgatg catctgctaa tatgtcaaga 1560 attgtaactt attcagattt ttggtggaaa ggtaaattag tatttaaagc taaactaaga 1620 gcatctcata cttggaatcc aattcaacaa atgagtatta atgtagataa ccaatttaac 1680 tatgtaccaa ataatattgg agctatgaaa attgtatatg aaaaatctca actagcacct 1740 agaaaattat attaa 1755 // ID AB000051; SV 1; linear; genomic DNA; STD; VRL; 2007 BP. XX AC AB000051; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 3) XX DE Feline panleukopenia virus gene for nonstructural protein 1, complete cds, DE isolate: AO1. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-2007 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "Evolutionary pattern of feline panleukopeina virus differs from that of RT canine parvovirus"; RL Unpublished. XX DR MD5; 5e920cf0dd5edbf1409a534524b110c3. XX FH Key Location/Qualifiers FH FT source 1..2007 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="AO1" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..2007 FT /product="nonstructural protein 1" FT /db_xref="GOA:P89512" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR021076" FT /db_xref="InterPro:IPR021972" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:P89512" FT /protein_id="BAA19012.1" FT /translation="MSGNQYTEEVMEGVNWLKKHAENEAFSFVFKCDNVQLNGKDVRWN FT NYTKPIQNEELTSLIRGAQTAMDQTEEEEMDWESEVDSLAKKQVQTFDALIKKCLFEVF FT VSKNIEPNECVWFIQHEWGKDQGWHCHVLLHSKNLQQATGKWLRRQMNMYWSRWLVTLC FT SVNLTPTEKIKLREIAEDSEWVTILTYRHKQTKKDYVKMVHFGNMIAYYFLTKKKIVHM FT TKESGYFLSTDSGWKFNFMKYQDRHTVSTLYTEQMKPETVETTVTTAQETKRGRIQTKK FT EVSIKCTLRDLVSKRVTSPEDWMMLQPDSYIEMMAQPGGENLLKNTLEICTLTLARTKT FT AFELILEKADNTKLTNFDLANSRTCQIFRMHGWNWIKVCHAIACVLNRQGGKRNTVLFH FT GPASTGKSIIAQAIAQAVGNVGCYNAANVNFPFNDCTNKNLIWIEEAGNFGQQVNQFKA FT ICSGQTIRIDQKGKGSKQIEPTPVIMTTNENITIVRIGCEERPEHTQPIRDRMLNIKLV FT CKLPGDFGLVDKEEWPLICAWLVKHGYQSTMANYTHHWGKVPEWDENWAEPKIQEGINS FT PGCKDLETEAASNPQSQDHVLTPLTPDVVDLALEPWSTPDTPIAETANQQSNQLGVTHK FT DVQASPTWSEIEADLRAIFTSEQLEEDFRDDLD" XX SQ Sequence 2007 BP; 766 A; 310 C; 405 G; 526 T; 0 other; atgtctggca accagtatac tgaggaagtt atggagggag taaattggtt aaagaaacat 60 gcagaaaatg aagcattttc gtttgttttt aaatgtgaca acgtccaact aaatggaaag 120 gatgttcgct ggaacaacta taccaaacca attcaaaatg aagagctaac atctttaatt 180 agaggagcac aaacagcaat ggatcaaacc gaagaagaag aaatggactg ggaatcggaa 240 gttgatagtc tcgccaaaaa gcaagtacaa acttttgatg cattaattaa aaaatgtctt 300 tttgaagtct ttgtttctaa aaatatagaa ccaaatgaat gtgtttggtt tattcaacat 360 gaatggggaa aagatcaagg ctggcattgt catgttttac ttcatagtaa gaacttacaa 420 caagcaactg gtaaatggct acgcagacaa atgaatatgt attggagtag atggttggtg 480 actctttgtt cggtaaactt aacaccaact gaaaagatta agctcagaga gattgcagaa 540 gatagtgaat gggtaactat attaacatac agacataagc aaacaaaaaa agactatgtt 600 aaaatggttc attttggaaa tatgatagca tattactttt taacaaagaa aaaaattgtc 660 cacatgacaa aagaaagtgg ctatttttta agtactgatt ctggttggaa atttaacttt 720 atgaagtatc aagacagaca tactgtcagc acactttaca ctgaacaaat gaaaccagaa 780 accgttgaaa ccacagtgac gacagcacag gaaacaaagc gcgggagaat tcaaactaaa 840 aaggaagtgt caatcaaatg tactttgcgg gacttggtta gtaaaagagt aacatcacct 900 gaagactgga tgatgttaca accagatagt tatattgaaa tgatggcaca accaggaggt 960 gaaaatcttt taaaaaatac acttgaaatt tgtactttga ctttagcaag aacaaaaaca 1020 gcatttgaat taatacttga aaaagcagat aatactaaac taactaactt tgatcttgca 1080 aattctagaa catgtcaaat ttttagaatg cacggatgga attggattaa agtttgtcac 1140 gctatagcat gtgttttaaa tagacaaggt ggtaaaagaa atacagttct ttttcatgga 1200 ccagcaagta caggaaaatc tattattgct caagccatag cacaagctgt gggtaatgtt 1260 ggttgttata atgcagcaaa tgtaaatttt ccatttaatg actgtaccaa taaaaattta 1320 atttggattg aagaagctgg taactttggt caacaagtta atcaatttaa agcaatttgt 1380 tctggacaaa caattagaat tgatcaaaaa ggtaaaggaa gtaagcaaat tgaaccaact 1440 ccagtaatta tgacaactaa tgaaaatata acaattgtaa gaattggatg tgaagaaaga 1500 cctgaacata cacaaccaat aagagacaga atgttgaaca ttaagttagt atgtaagctt 1560 ccaggagact ttggtttggt tgataaagaa gaatggcctt taatatgtgc atggttagtt 1620 aaacatggtt atcaatcaac catggctaac tatacacatc attggggaaa agtaccagaa 1680 tgggacgaaa actgggcgga gcctaaaata caagaaggta taaattcacc aggttgcaaa 1740 gacttagaga cagaagcggc aagcaatcct cagagtcaag accacgttct aactcctctg 1800 actccggacg tagtggacct tgcactggaa ccgtggagta ctccagatac gcctattgca 1860 gaaactgcaa atcaacaatc aaaccaactt ggcgttactc acaaagacgt gcaagcgagt 1920 ccgacatggt ccgaaataga ggcagacctg agagccattt ttacttctga acaattggaa 1980 gaagattttc gagacgactt ggattaa 2007 // ID AB000052; SV 1; linear; genomic DNA; STD; VRL; 1755 BP. XX AC AB000052; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 4) XX DE Feline panleukopenia virus gene for capsid protein 2, complete cds, DE isolate: AO1. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-1755 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "Evolutionary pattern of feline panleukopenia virus differs that of canine RT parvovirus"; RL Unpublished. XX DR MD5; 659521c45b753876c94245cb24af1cdd. DR EuropePMC; PMC3059301; 21366901. XX FH Key Location/Qualifiers FH FT source 1..1755 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="AO1" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..1755 FT /product="capsid protein 2" FT /db_xref="GOA:P90447" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR036952" FT /db_xref="UniProtKB/TrEMBL:P90447" FT /protein_id="BAA19013.1" FT /translation="MSDGAVQPDGGQPAVRNERAAGSGNGSGGGGGGGSGGVGISTGTF FT NNQTEFKFLENGWVEITANSSRLVHLNMPESENYKRVVVNNMDKTAVKGNMALDDTHVQ FT IVTPWSLVDANAWGVWFNPGDWQLIVNTMSELHLVSFEQEIFNVVLKTVSESATQPPTK FT VYNNDLTASLMVALDSNNTMPFTPAAMRSETLGFYPWKPTIPTPWRYYFQWDRTLIPSH FT TGTSGTPTNVYHGTDPDDVQFYTIENSVPVHLLRTGDEFATGTFFFDCKPCRLTHTWQT FT NRALGLPPFLNSLPQSEGATNFGDIGVQQDKRRGVTQMGNTDYITEATIMRPAEVGYSA FT PYYSFEASTQGPFKTPIAAGRGGAQTDENQAADGDPRYAFGRQHGQKTTTTGETPERFT FT YIAHQDTGRYPEGDWIQNINFNLPVTNDNVLLPTDPIGGKTGINYTNIFNTYGPLTALN FT NVPPVYPNGQIWDKEFDTDLKPRLHVNAPFVCQNNCPGQLFVKVAPNLTNEYDPDASAN FT MSRIVTYSDFWWKGKLVFKAKLRASHTWNPIQQMSINVDNQFNYVPNNIGAMKIVYEKS FT QLAPRKLY" XX SQ Sequence 1755 BP; 616 A; 271 C; 348 G; 520 T; 0 other; atgagtgatg gagcagttca accagacggt ggtcaacctg ctgtcagaaa tgaaagagct 60 gcaggatctg ggaacgggtc tggaggcggg ggtggtggtg gttctggggg tgtggggatt 120 tctacgggta ctttcaataa tcagacggaa tttaaatttt tggaaaacgg gtgggtggaa 180 atcacagcaa actcaagcag acttgtacat ttaaatatgc cagaaagtga aaattataaa 240 agagtagttg taaataatat ggataaaact gcagttaaag gaaacatggc tttagatgat 300 actcatgtac aaattgtaac accttggtca ttggttgatg caaatgcttg gggagtttgg 360 tttaatccag gagattggca actaattgtt aatactatga gtgagttgca tttagttagt 420 tttgaacaag aaatttttaa tgttgtttta aagactgttt cagaatctgc tactcagcca 480 ccaactaaag tttataataa tgatttaact gcatcattga tggttgcatt agatagtaat 540 aatactatgc catttactcc agcagctatg agatctgaga cattgggttt ttatccatgg 600 aaaccaacca taccaactcc atggagatat tattttcaat gggatagaac attaatacca 660 tctcatactg gaactagtgg cacaccaaca aatgtatatc atggtacaga tccagatgat 720 gttcaatttt atactattga aaattctgtg ccagtacact tactaagaac aggtgatgaa 780 tttgctacag gaacattttt ttttgattgt aaaccatgta gactaacaca tacatggcaa 840 acaaatagag cattgggctt accaccattt ttaaattctt tgcctcaatc tgaaggagct 900 actaactttg gtgatatagg agttcaacaa gataaaagac gtggtgtaac tcaaatggga 960 aatacagact atattactga agctactatt atgagaccag ctgaggttgg ttatagtgca 1020 ccatattatt cttttgaagc gtctacacaa gggccattta aaacacctat tgcagcagga 1080 cgggggggag cgcaaacaga tgaaaatcaa gcagcagatg gtgatccaag atatgcattt 1140 ggtagacaac atggtcaaaa aactactaca acaggagaaa cacctgagag atttacatat 1200 atagcacatc aagatacagg aagatatcca gaaggagatt ggattcaaaa tattaacttt 1260 aaccttcctg taacaaatga taatgtattg ctaccaacag atccaattgg gggtaaaaca 1320 ggaattaact atactaatat atttaatact tatggtcctt taactgcatt aaataatgta 1380 ccaccagttt atccaaatgg tcaaatttgg gataaagaat ttgatactga cttaaaacca 1440 agacttcatg taaatgcacc atttgtttgt caaaataatt gtcctggtca attatttgta 1500 aaagttgcgc ctaatttaac gaatgaatat gatcctgatg catctgctaa tatgtcaaga 1560 attgtaactt attcagattt ttggtggaaa ggtaaattag tatttaaagc taaactaaga 1620 gcatctcata cttggaatcc aattcagcaa atgagtatta atgtagataa ccaatttaac 1680 tatgtaccaa ataatattgg agctatgaaa attgtatatg aaaaatctca actagcacct 1740 agaaaattat attaa 1755 // ID AB000053; SV 1; linear; genomic DNA; STD; VRL; 2007 BP. XX AC AB000053; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 3) XX DE Feline panleukopenia virus gene for nonstructural protein 1, complete cds, DE isolate: Fukagawa. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-2007 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "Evolutionary pattern of feline panleukopenia virus differs from that of RT canine parvovirus"; RL Unpublished. XX DR MD5; 5aa94bf086d1d70b877ec7fef2f7a40e. XX FH Key Location/Qualifiers FH FT source 1..2007 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="Fukagawa" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..2007 FT /product="nonstructural protein 1" FT /db_xref="GOA:P89513" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR021076" FT /db_xref="InterPro:IPR021972" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:P89513" FT /protein_id="BAA19014.1" FT /translation="MSGNQYTEEVMEGVNWLKKHAENEAFSFVFKCDNVQLNGKDVRWN FT NYTKPIQNEELTSLIRGAQTAMDQTEEEEMDWESEVDSLAKKQVQTFDALIKKCLFEVF FT VSKNIEPNECVWFIQHEWGKDQGWHCHVLLHSKNLQQATGKWLRRQMNMYWSRWLVTLC FT SVNLTPTEKIKLREIAEDSEWVTILTYRHKQTKKDYVKMVHFGNMIAYYFLTKKKIVHM FT TKESGYFLSTDSGWKFNFMKHQDRHTVSTLYTEQMKPETVETTVTTAQETKRGRIQTKK FT EVSIKCTLRDLVSKRVTSPEDWMMLQPDSYIEMMAQPGGENLLKNTLEICTLTLARTKT FT AFELILEKADNTKLTNFDLANSRTCQIFRMHGWNWIKVCHAIACVLNRQGGKRNTVLFH FT GPASTGKSIIAQAIAQAVGNVGCYNAANVNFPFNDCTNKNLIWIEEAGNFGQQVNQFKA FT ICSGQTIRIDQKGKGSKQIEPTPVIMTTNENITIVRIGCEERPEHTQPIRDRMLNIKLV FT CKLPGDFGLVDKEEWPLICAWLVKHGYQSTMANYTHHWGKVPEWDENWAEPKIQEGINS FT PGCKDLETQAASNPQSQDHVLTPLTPDVVDLALEPWSTPDTPIAETANQQSNQLGVTHK FT DVQASPTWSEIEADLRAIFTSEQLEEDFRDDLD" XX SQ Sequence 2007 BP; 767 A; 311 C; 403 G; 526 T; 0 other; atgtctggca accagtatac tgaggaagtt atggagggag taaattggtt aaagaaacat 60 gcagaaaatg aagcattttc gtttgttttt aaatgtgaca acgtccaact aaatggaaag 120 gatgttcgct ggaacaacta taccaaacca attcaaaatg aagagctaac atctttaatt 180 agaggagcac aaacagcaat ggatcaaacc gaagaagaag aaatggactg ggaatcggaa 240 gttgatagtc tcgccaaaaa gcaagtacaa acttttgatg cattaattaa aaaatgtctt 300 tttgaagtct ttgtttctaa aaatatagaa ccaaatgaat gtgtttggtt tattcaacat 360 gaatggggaa aagatcaagg ctggcattgt catgttttac ttcatagtaa gaacttacaa 420 caagcaactg gtaaatggct acgcagacaa atgaatatgt attggagtag atggttggtg 480 actctttgtt cggtaaactt aacaccaact gaaaagatta agctcagaga aattgcagaa 540 gatagtgaat gggtaactat attaacatac agacataagc aaacaaaaaa agactatgtt 600 aaaatggttc attttggaaa tatgatagca tattactttt taacaaagaa aaaaattgtc 660 cacatgacaa aagaaagtgg ctatttttta agtactgatt ctggttggaa atttaacttt 720 atgaagcatc aagacagaca tactgttagc acactttaca ctgaacaaat gaaaccagaa 780 accgttgaaa ccacagtgac gacagcacag gaaacaaagc gcgggagaat tcaaactaaa 840 aaggaagtgt caatcaaatg tactttgcgg gacttggtta gtaaaagagt aacatcacct 900 gaagactgga tgatgttaca accagatagt tatattgaaa tgatggcaca accaggaggt 960 gaaaatcttt taaaaaatac acttgaaatt tgtactttga ctttagcaag aacaaaaaca 1020 gcatttgaat taatacttga aaaagcagat aatactaaac taactaactt tgatcttgca 1080 aattctagaa catgtcaaat ttttagaatg cacggatgga attggattaa agtttgtcac 1140 gctatagcat gtgttttaaa tagacaaggt ggtaaaagaa atacagttct ttttcatgga 1200 ccagcaagta caggaaaatc tattattgct caagccatag cacaagctgt gggtaatgtt 1260 ggttgttata atgcagcaaa tgtaaatttt ccatttaatg actgtaccaa taaaaattta 1320 atttggattg aagaagctgg taactttggt caacaagtta atcaatttaa agcaatttgt 1380 tctggacaaa caattagaat tgatcaaaaa ggtaaaggaa gtaagcaaat tgaaccaact 1440 ccagtaatta tgacaactaa tgaaaatata acaattgtaa gaattggatg tgaagaaaga 1500 cctgaacata cacaaccaat aagagacaga atgttgaaca ttaagttagt atgtaagctt 1560 ccaggagact ttggtttggt tgataaagaa gaatggcctt taatatgtgc atggttagtt 1620 aaacatggtt atcaatcaac catggctaac tatacacatc attggggaaa agtaccagaa 1680 tgggacgaaa actgggcgga gcctaaaata caagaaggta taaattcacc aggttgcaaa 1740 gacttagaga cacaagcggc aagcaatcct cagagtcaag accacgttct aactcctctg 1800 actccggacg tagtggacct tgcactggaa ccgtggagta ctccagatac gcctattgca 1860 gaaactgcaa atcaacaatc aaaccaactt ggcgttactc acaaagacgt gcaagcgagt 1920 ccgacatggt ccgaaataga ggcagacctg agagccattt ttacttctga acaattggaa 1980 gaagattttc gagacgactt ggattaa 2007 // ID AB000054; SV 1; linear; genomic DNA; STD; VRL; 1755 BP. XX AC AB000054; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 4) XX DE Feline panleukopenia virus gene for capsid protein 2, complete cds, DE isolate: Fukagawa. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-1755 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "Evolutionary pattern of feline panleukoppenia virus differs that of canine RT parvovirus"; RL Unpublished. XX DR MD5; cddb7e09f951171b0775e60ce458ab58. DR EuropePMC; PMC3059301; 21366901. XX FH Key Location/Qualifiers FH FT source 1..1755 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="Fukagawa" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..1755 FT /product="capsid protein 2" FT /db_xref="GOA:P90438" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR036952" FT /db_xref="UniProtKB/TrEMBL:P90438" FT /protein_id="BAA19015.1" FT /translation="MSDGAVQPDGGQPAVRNERATGSGNGSGGGGGGGSGGVGISTGTF FT NNQTEFKFLENGWVEITANSSRLVHLNMPESENYKRVVVNNMDKTAVKGNMALDDIHVQ FT IVTPWSLVDANAWGVWFNPGDWQLIVNTMSELHLVSFEQEIFNVVLKTVSESATQPPTK FT VYNNDLTASLMVALDSNNTMPFTPAAMRSETLGFYPWKPTIPTPWRYYFQWDRTLIPSH FT TGTSGTPTNVYHGTDPDDVQFYTIENSVPVHLLRTGDEFATGTFFFDCKPCRLTHTWQT FT NRALGLPPFLNSLPQSEGATNFGDIGVQQDKRRGVTQMGNTDYITEATIMRPAEVGYSA FT PYYSFEASTQGPFKTPIAAGRGGAQTDENQAADGDPRYAFGRQHGQKTTTTGETPERFT FT YIAHQDTGRYPEGDWIQNINFNLPVTNDNVLLPTDPIGGKTGINYTNIFNTYGPLTALN FT NVPPVYPNGQIWDKEFDTDLKPRLHVNAPFVCQNNCPGQLFVKVAPNLTNEYDPDASAN FT MSRIVTYSDFWWKGKLVFKAKLRASHTWNPIQQMSINVDNQFNYVPNNIGAMKIVYEKS FT QLAPRKLY" XX SQ Sequence 1755 BP; 618 A; 270 C; 346 G; 521 T; 0 other; atgagtgatg gagcagttca accagacggt ggtcaacctg ctgtcagaaa tgaaagagct 60 acaggatctg ggaacgggtc tggaggcggg ggtggtggtg gttctggggg tgtggggatt 120 tctacgggta ctttcaataa tcagacggaa tttaaatttt tggaaaacgg gtgggtggaa 180 atcacagcaa actcaagcag acttgtacat ttaaatatgc cagaaagtga aaattataaa 240 agagtagttg taaataatat ggataaaact gcagttaaag gaaacatggc tttagatgat 300 attcatgtac aaattgtaac accttggtca ttggttgatg caaatgcttg gggagtttgg 360 tttaatccag gagattggca actaattgtt aatactatga gtgagttgca tttagttagt 420 tttgaacaag aaatttttaa tgttgtttta aagactgttt cagaatctgc tactcagcca 480 ccaactaaag tttataataa tgatttaact gcatcattga tggttgcatt agatagtaat 540 aatactatgc catttactcc agcagctatg agatctgaga cattgggttt ttatccatgg 600 aaaccaacca taccaactcc atggagatat tattttcaat gggatagaac attaatacca 660 tctcatactg gaactagtgg cacaccaaca aatgtatatc atggtacaga tccagatgat 720 gttcaatttt atactattga aaattctgtg ccagtacact tactaagaac aggtgatgaa 780 tttgctacag gaacattttt ttttgattgt aaaccatgta gattaacaca tacatggcaa 840 acaaatagag cattgggctt accaccattt ttaaattctt tgcctcaatc tgaaggagct 900 actaactttg gtgatatagg agttcaacaa gataaaagac gtggtgtaac tcaaatggga 960 aatacagact atattactga agctactatt atgagaccag ctgaggttgg ttatagtgca 1020 ccatattatt cttttgaagc gtctacacaa gggccattta aaacacctat tgcagcagga 1080 cgggggggag cgcaaacaga tgaaaatcaa gcagcagatg gtgatccaag atatgcattt 1140 ggtagacaac atggtcaaaa aactactaca acaggagaaa cacctgagag atttacatat 1200 atagcacatc aagatacagg aagatatcca gaaggagatt ggattcaaaa tattaacttt 1260 aaccttcctg taacaaatga taatgtattg ctaccaacag atccaattgg gggtaaaaca 1320 ggaattaact atactaatat atttaatact tatggtcctt taactgcatt aaataatgta 1380 ccaccagttt atccaaatgg tcaaatttgg gataaagaat ttgatactga cttaaaacca 1440 agacttcatg taaatgcacc atttgtttgt caaaataatt gtcctggtca attatttgta 1500 aaagttgcgc ctaatttaac gaatgaatat gatcctgatg catctgctaa tatgtcaaga 1560 attgtaactt attcagattt ttggtggaaa ggtaaattag tatttaaagc taaactaaga 1620 gcatctcata cttggaatcc aattcaacaa atgagcatta atgtagataa ccaatttaac 1680 tatgtaccaa ataatattgg agctatgaaa attgtatatg aaaaatctca actagcacct 1740 agaaaattat attaa 1755 // ID AB000055; SV 1; linear; genomic DNA; STD; VRL; 2007 BP. XX AC AB000055; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 3) XX DE Feline panleukopenia virus gene for nonstructural protein 1, complete cds, DE isolate: Obihiro. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-2007 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "Evolutionary pattern of feline panleukopenia virus differs from that of RT canine parvovirus"; RL Unpublished. XX DR MD5; 55710354956c20de617cb4a3b2326bba. XX FH Key Location/Qualifiers FH FT source 1..2007 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="Obihiro" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..2007 FT /product="nonstructural protein 1" FT /db_xref="GOA:P89514" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR021076" FT /db_xref="InterPro:IPR021972" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:P89514" FT /protein_id="BAA19016.1" FT /translation="MSGNQYTEEVMEGVNWLKKHAENEAFSFVFKCDNVQLNGKDVRWN FT NYTKPIQNEELTSLIRGAQTAMDQTEEEEMDWESEVDSLAKKQVQTFDALIKKCLFEVF FT VSKNIEPNECVWFIQHEWGKDQGWHCHVLLHSKNLQQATGKWLRRQMNMYWSRWLVTLC FT SVNLTPTEKIKLREIAEDSEWVTILTYRHKQTKKDYVKMVHFGNMIAYYFLTKKKIVHM FT TKESGYFLSTDSGWKFNFMKYQDRHTVSTLYTEQMKPETVETTVTTAQETKRGRIQTKK FT EVSIKCTLRDLVSKRVTSPEDWMMLQPDSYIEMMAQPGGENLLKNTLEICTLTLARTKT FT AFELILEKADNTKLTNFDLANSRTCQIFRMHGWNWIKVCHAIACVLNRQGGKRNTVLFH FT GPASTGKSIIAQAIAQAVGNVGCYNAANVNFPFNDCTNKNLIWIEEAGNFGQQVNQFKA FT ICSGQTIRIDQKGKGSKQIEPTPVIMTTNENITIVRIGCEERPEHTQPIRDRMLNIKLV FT CKLPGDFGLVDKEEWPLICAWLVKHGYQSTMANYTHHWGKVPEWDENWAEPKIQEGVNS FT PGCKDLETQAASNPQSQDHVLTPLTPDVVDLALEPWSTPDTPIAETANQQSNQLGVTHK FT DVQASPTWSEIEADLRAIFTSEQLEEDFRDDLD" XX SQ Sequence 2007 BP; 764 A; 312 C; 406 G; 525 T; 0 other; atgtctggca accagtatac tgaggaagtt atggagggag taaattggtt aaagaaacat 60 gcagaaaatg aagcattttc gtttgttttt aaatgtgaca acgtccaact aaatggaaag 120 gatgttcgct ggaacaacta taccaaacca attcaaaatg aagagctaac atctttaata 180 agaggagcac aaacagcaat ggatcaaacc gaagaagaag aaatggactg ggaatcggaa 240 gttgatagtc tcgccaaaaa gcaagtacaa acttttgatg cattaattaa gaaatgtctt 300 tttgaagtct ttgtttctaa aaatatagaa ccaaatgaat gtgtttggtt tattcaacat 360 gaatggggaa aagatcaagg ctggcattgt catgttttac ttcatagtaa gaacttacaa 420 caagcaactg gtaaatggct acgcagacaa atgaatatgt attggagtag atggttggtg 480 actctttgtt cggtaaactt aacaccaact gaaaagatta agctcagaga aattgcagaa 540 gatagtgaat gggtgactat attaacatac agacataagc aaacaaaaaa agactatgtt 600 aaaatggttc attttggaaa tatgatagca tattactttt taacaaagaa aaaaattgtc 660 cacatgacaa aagaaagtgg ctatttttta agtactgatt ctggttggaa atttaacttt 720 atgaagtatc aagacagaca tactgtcagc acactttaca ctgaacaaat gaaaccagaa 780 accgttgaaa ccacagtgac gacagcacag gaaacaaagc gcgggagaat tcaaactaaa 840 aaggaagtgt caatcaaatg tactttgcgg gacttggtta gtaaaagagt aacatcacct 900 gaagactgga tgatgttaca accagatagt tatattgaaa tgatggcaca accaggaggt 960 gaaaatcttt taaaaaatac acttgaaatt tgtactttga ctttagcaag aacaaaaaca 1020 gcatttgaat taatacttga aaaagcagat aatactaaac taactaactt tgatcttgca 1080 aattctagaa catgtcaaat ttttagaatg cacggatgga attggattaa agtttgtcac 1140 gctatagcat gtgttttaaa tagacaaggt ggtaaaagaa atacagttct ttttcatgga 1200 ccagcaagta caggaaaatc tattattgct caagccatag cacaagctgt gggtaatgtt 1260 ggttgttata atgcagcaaa tgtaaatttt ccatttaatg actgtaccaa taaaaattta 1320 atttggattg aagaagctgg taactttggt caacaagtta atcaatttaa agcaatttgt 1380 tctggacaaa caattagaat tgatcaaaaa ggtaaaggaa gtaagcaaat tgaacccact 1440 ccagtaatta tgacaactaa tgaaaatata acaattgtaa gaattggatg tgaagaaaga 1500 cctgaacata cacaaccaat aagagacaga atgttgaaca ttaagttagt atgtaagctt 1560 ccaggagact ttggtttggt tgataaagaa gaatggcctt taatatgtgc atggttagtt 1620 aaacatggtt atcaatcaac catggctaac tatacacatc attggggaaa agtaccagaa 1680 tgggacgaaa actgggcgga gcctaaaata caagaaggtg taaattcacc aggttgcaaa 1740 gacttagaga cacaagcggc aagcaatcct cagagtcaag accacgttct aactcctctg 1800 actccggacg tagtggacct tgcactggaa ccgtggagta ctccagatac gcctattgca 1860 gaaactgcaa atcaacaatc aaaccaactt ggcgttactc acaaagacgt gcaagcgagt 1920 ccgacatggt ccgaaataga ggcagacctg agagccattt ttacttctga acaattggaa 1980 gaagattttc gagacgactt ggattaa 2007 // ID AB000056; SV 1; linear; genomic DNA; STD; VRL; 1755 BP. XX AC AB000056; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 4) XX DE Feline panleukopenia virus gene for capsid protein 2, complete cds, DE isolate: Obihiro. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-1755 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "evolutionary pattern of feline panleukopenia virus differs that of canine RT parvovirus"; RL Unpublished. XX DR MD5; efc1cb2a58cd2f6bbfe90cb332510d2c. DR EuropePMC; PMC3059301; 21366901. XX FH Key Location/Qualifiers FH FT source 1..1755 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="Obihiro" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..1755 FT /product="capsid protein 2" FT /db_xref="GOA:P90447" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR036952" FT /db_xref="UniProtKB/TrEMBL:P90447" FT /protein_id="BAA19017.1" FT /translation="MSDGAVQPDGGQPAVRNERAAGSGNGSGGGGGGGSGGVGISTGTF FT NNQTEFKFLENGWVEITANSSRLVHLNMPESENYKRVVVNNMDKTAVKGNMALDDTHVQ FT IVTPWSLVDANAWGVWFNPGDWQLIVNTMSELHLVSFEQEIFNVVLKTVSESATQPPTK FT VYNNDLTASLMVALDSNNTMPFTPAAMRSETLGFYPWKPTIPTPWRYYFQWDRTLIPSH FT TGTSGTPTNVYHGTDPDDVQFYTIENSVPVHLLRTGDEFATGTFFFDCKPCRLTHTWQT FT NRALGLPPFLNSLPQSEGATNFGDIGVQQDKRRGVTQMGNTDYITEATIMRPAEVGYSA FT PYYSFEASTQGPFKTPIAAGRGGAQTDENQAADGDPRYAFGRQHGQKTTTTGETPERFT FT YIAHQDTGRYPEGDWIQNINFNLPVTNDNVLLPTDPIGGKTGINYTNIFNTYGPLTALN FT NVPPVYPNGQIWDKEFDTDLKPRLHVNAPFVCQNNCPGQLFVKVAPNLTNEYDPDASAN FT MSRIVTYSDFWWKGKLVFKAKLRASHTWNPIQQMSINVDNQFNYVPNNIGAMKIVYEKS FT QLAPRKLY" XX SQ Sequence 1755 BP; 619 A; 273 C; 345 G; 518 T; 0 other; atgagtgatg gagcagttca accagacggt ggtcaacctg ctgtcagaaa tgaaagagct 60 gcaggatctg ggaacgggtc tggaggcggg ggtggtggtg gttctggggg tgtggggatt 120 tctacgggta ctttcaataa tcagacggaa tttaaatttt tggaaaacgg atgggtggaa 180 atcacagcaa actcaagcag acttgtacat ttaaatatgc cagaaagtga aaattataaa 240 agagtagttg taaataatat ggataaaact gcagttaaag gaaacatggc tttagatgat 300 actcatgtac aaattgtaac accttggtca ttggttgatg caaatgcttg gggagtttgg 360 tttaatccag gagattggca actaattgtt aatactatga gtgagttgca tttagttagt 420 tttgaacaag aaatttttaa tgttgtttta aagactgttt cagaatctgc tactcagcca 480 ccaactaaag tttataataa tgatttaact gcatcattga tggttgcatt agatagtaat 540 aatactatgc catttactcc agcagctatg agatctgaga cattgggttt ttatccatgg 600 aaaccaacca taccaactcc atggagatat tattttcaat gggatagaac attaatacca 660 tctcatactg gaactagtgg cacaccaaca aatgtatatc atggcacaga tccagatgat 720 gttcaatttt atactattga aaattctgtg ccagtacact tactaagaac aggtgatgaa 780 tttgctacag gaacattttt ttttgattgt aaaccatgta gactaacaca tacatggcaa 840 acaaatagag cattgggctt accaccattt ctaaattctt tgcctcaatc tgaaggagct 900 actaactttg gtgatatagg agttcaacaa gataaaagac gtggtgtaac tcaaatggga 960 aatacagact atattactga agctactatt atgagaccag ctgaggttgg ttatagtgca 1020 ccatattatt cttttgaagc gtctacacaa gggccattta aaacacctat tgcagcagga 1080 cgggggggag cgcaaacaga tgaaaatcaa gcagcagatg gtgatccaag atatgcattt 1140 ggtagacaac atggtcaaaa aactactaca acaggagaaa cacctgagag atttacatat 1200 atagcacatc aagatacagg aagatatcca gaaggagatt ggattcaaaa tattaacttt 1260 aaccttcctg taacaaatga taatgtattg ctaccaacag atccaattgg aggtaaaaca 1320 ggaattaact atactaatat atttaatact tatggtcctt taactgcatt aaataatgta 1380 ccaccagttt atccaaatgg tcaaatttgg gataaagaat ttgatactga cttaaaacca 1440 agacttcatg taaatgcacc atttgtttgt caaaataatt gtcctggtca attatttgta 1500 aaagttgcgc ctaatttaac gaatgaatat gatcctgatg catctgctaa tatgtcaaga 1560 attgtaactt attcagattt ttggtggaaa ggtaaattag tatttaaagc taaactaaga 1620 gcatctcata cttggaatcc aattcaacaa atgagtatta atgtagataa ccaatttaac 1680 tatgtaccaa ataatattgg agctatgaaa attgtatatg aaaaatctca actagcacct 1740 agaaaattat attaa 1755 // ID AB000057; SV 1; linear; genomic DNA; STD; VRL; 2007 BP. XX AC AB000057; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 3) XX DE Feline panleukopenia virus gene for nonstructural protein 1, complete cds, DE isolate: PLI-IV. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-2007 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "Evolutionary pattern of feline panleukopenia virus differs from that of RT canine parvovirus"; RL Unpublished. XX DR MD5; b78422a8eded1f5195ebc088fad01b0c. XX FH Key Location/Qualifiers FH FT source 1..2007 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="PLI-IV" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..2007 FT /product="nonstructural protein 1" FT /db_xref="GOA:P89515" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR021076" FT /db_xref="InterPro:IPR021972" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:P89515" FT /protein_id="BAA19018.1" FT /translation="MSGNQYTEEVMEGVNWLKKHAENEAFSFVFKCDNVQLNGKDVRWN FT NYTKPIQNEELTSLIRGAQTAMDQTEEEEMDWESEVDSLAKKQVQTFDALIKKCLFEVF FT VSKNIEPNECVWFIQHEWGKDQGWHCHVLLHSKNLQQATGKWLRRQMNMYWSRWLVTLC FT SVNLTPTEKIKLREIAEDSEWVTILTYRHKQTKKDYVKMVHFGNMIAYYFLTKKKIVHM FT TKESGYFLSTDSGWKFNFMKYQDRHTVSTLYTEQMKPETVETTVTTAQETKRGRIQTKK FT EVSIKCTLRDLVSKRVTSPEDWMMLQPDSYIEMMAQPGGENLLKNTLEICTLTLARTKT FT AFELILEKADNTKLTNFDLANSRTCQIFRMHGWNWIKVCHAIACVLNRQGGKRNTVLFH FT GPASTGKSIIAQAIAQAVGNVGCYNAANVNFPFNDCTNKNLIWVEEAGNFGQQVNQFKA FT ICSGQTIRIDQKGKGSKQIEPTPVIMTTNENITIVRIGCEERPEHTQPIRDRMLNIKLV FT CKLPGDFGLVDKEEWPLICAWLVKHGYQSTMANYTHHWGKVPEWDENWAEPKIQEGVNS FT PGCKDLETQAASNPQSQDHVLTPLTPDVVDLALEPWSTPDTPIAETANQQSNQLGVTHK FT DVQASPTWSEIEADLRAIFTSEQLEEDFRDDLD" XX SQ Sequence 2007 BP; 763 A; 313 C; 407 G; 524 T; 0 other; atgtctggca accagtatac tgaggaagtt atggagggag taaattggtt aaagaaacat 60 gcagaaaatg aagcattttc gtttgttttt aaatgtgaca acgtccaact aaatggaaag 120 gatgttcgct ggaacaacta taccaaacca attcaaaatg aagagctaac atctttaatt 180 agaggagcac aaacagcaat ggatcaaacc gaagaagaag aaatggactg ggaatcggaa 240 gttgatagtc tcgccaaaaa gcaagtacaa acttttgatg cattaattaa aaaatgtctt 300 tttgaagtct ttgtttctaa aaatatagaa ccaaatgaat gtgtttggtt tattcaacat 360 gaatggggaa aagatcaagg ctggcattgt catgttttac ttcatagtaa gaacttacaa 420 caagcaactg gtaaatggct acgcagacaa atgaatatgt attggagtag atggttggtg 480 actctttgtt cggtaaactt aacaccaact gaaaagatta agctcagaga aattgcagaa 540 gatagtgaat gggtgactat attaacatac agacataagc aaacaaaaaa agactatgtt 600 aaaatggttc attttggaaa tatgatagca tattactttt taacaaagaa aaaaattgtc 660 cacatgacaa aagaaagtgg ctatttttta agtactgatt ctggttggaa atttaacttt 720 atgaagtatc aagacagaca tactgtcagc acactttaca ctgaacaaat gaaaccagaa 780 accgttgaaa ccacagtgac gacagcacag gaaacaaagc gcgggagaat tcaaactaaa 840 aaggaagtgt caatcaaatg tactttgcgg gacttggtta gtaaaagagt aacatcacct 900 gaagactgga tgatgttaca accagatagt tatattgaaa tgatggcaca accaggaggt 960 gaaaatcttt taaaaaatac acttgaaatt tgtactttga ctttagcaag aacaaaaaca 1020 gcatttgaat taatacttga aaaagcagat aatactaaac taactaactt tgatcttgca 1080 aattctagaa catgtcaaat ttttagaatg cacggatgga attggattaa agtttgtcac 1140 gctatagcat gtgttttaaa tagacaaggt ggtaaaagaa atacagttct ttttcatgga 1200 ccagcaagta caggaaaatc tattattgct caagccatag cacaagctgt gggtaatgtt 1260 ggttgttata atgcagcaaa tgtaaatttt ccatttaatg actgtaccaa taaaaattta 1320 atttgggttg aagaagctgg taactttggt caacaagtta atcaatttaa agcaatttgt 1380 tctggacaaa caattagaat tgatcaaaaa ggtaaaggaa gtaagcaaat tgaaccaact 1440 ccagtaatta tgacaactaa tgagaatata acaattgtaa gaattggatg tgaagaaaga 1500 cctgaacata cacaaccaat aagagacaga atgttgaaca ttaagttagt atgtaagctt 1560 ccaggagact ttggtttggt tgataaagaa gaatggccct taatatgtgc atggttagtt 1620 aaacatggtt atcaatcaac catggctaac tatacacatc attggggaaa agtaccagaa 1680 tgggacgaaa actgggcgga gcctaaaata caagaaggtg taaattcacc aggttgcaaa 1740 gacttagaga cacaagcggc aagcaatcct cagagtcaag accacgttct aactcctctg 1800 actccggacg tagtggacct tgcactggaa ccgtggagta ctccagatac gcctattgca 1860 gaaactgcaa atcaacaatc aaaccaactt ggcgttactc acaaagacgt gcaagcgagt 1920 ccgacatggt ccgaaataga ggcagacctg agagccatct ttacttctga acaattggaa 1980 gaagattttc gagacgactt ggattaa 2007 // ID AB000058; SV 1; linear; genomic DNA; STD; VRL; 2007 BP. XX AC AB000058; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 3) XX DE Feline panleukopenia virus gene for nonstructural protein 1, complete cds, DE isolate: Som1. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-2007 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "Evolutionary pattern of feline panleukopenia virus differs from that of RT canine parvovirus"; RL Unpublished. XX DR MD5; 7e5bc5bdfc26dc2c28950c14a28f8a23. XX FH Key Location/Qualifiers FH FT source 1..2007 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="Som1" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..2007 FT /product="nonstructural protein 1" FT /db_xref="GOA:P90484" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR021076" FT /db_xref="InterPro:IPR021972" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:P90484" FT /protein_id="BAA19019.1" FT /translation="MSGNQYTEEVMEGVNWLKKHAEDEAFSFVFKCDNVQLNGKDVRWN FT NYTKPIQNEELTSLIRGAQTAMDQTEEEEMDWESEVDSLAKKQVQTFDALIKKCLFEVF FT VSKNIEPNECVWFIQHEWGKDQGWHCHVLLHSKNLQQATGKWLRRQMNMYWSRWLVTLC FT SINLTPTEKIKLREIAEDSEWVTILTYRHKQTKKDYVKMVHFGNMIAYYFLTKKKIVHM FT TKESGYFLSTDSGWKFNFMKYQDRHTVSTLYTEQMKPETVETTVTTAQETKRGRIQTKK FT EVSIKCTLRDLVSKRVTSPEDWMMLQPDSYIEMMAQPGGENLLKNTLEICTLTLARTKT FT AFELILEKADNTKLTNFDLANSRTCQIFRMHGWNWIKVCHAIACVLNRQGGKRNTVLFH FT GPASTGKSIIAQAIAQAVGNVGCYNAANVNFPFNDCTNKNLIWVEEAGNFGQQVNQFKA FT ICSGQTIRIDQKGKGSKQIEPTPVIMTTNENITIVRIGCEERPEHTQPIRDRMLNIKLV FT CKLPGDFGLVDKEEWPLICAWLVKHGYQSTMANYTHHWGKVPEWDENWAEPKIQEGINS FT PGCKDLETQAASNPQSQDHVLTPLTPDVVDLALEPWSTPDTPIAETANQQSNQLGVTHK FT DVQASPTWSEIEADLRAIFTSEQLEEDFRDDLD" XX SQ Sequence 2007 BP; 766 A; 311 C; 404 G; 526 T; 0 other; atgtctggca accagtatac tgaggaagtt atggagggag taaattggtt aaagaaacat 60 gcagaagatg aagcattttc gtttgttttt aaatgtgaca acgtccaact aaatggaaag 120 gatgttcgct ggaacaacta taccaaacca attcaaaatg aagagctaac atctttaatt 180 agaggagcac aaacagcaat ggatcaaacc gaagaagaag aaatggactg ggaatcggaa 240 gttgatagtc tcgccaaaaa gcaagtacaa acttttgatg cattaattaa aaaatgtctt 300 tttgaagtct ttgtttctaa aaatatagaa ccaaatgaat gtgtttggtt tattcaacat 360 gaatggggaa aagatcaagg ctggcattgt catgttttac ttcatagtaa gaacttacaa 420 caagcaactg gtaaatggct acgcagacaa atgaatatgt attggagtag atggttggtg 480 actctttgtt cgataaattt aacaccaact gaaaagatta agctcagaga aattgcagaa 540 gatagtgaat gggtaactat attaacatac agacataagc aaacaaaaaa agactatgtt 600 aaaatggttc attttggaaa tatgatagca tattactttt taacaaagaa aaaaattgtc 660 cacatgacaa aagaaagtgg ctatttttta agtactgatt ctggttggaa atttaacttt 720 atgaagtatc aagacagaca tactgtcagc acactttaca ctgaacaaat gaaaccagaa 780 accgttgaaa ccacagtgac gacagcacag gaaacaaagc gcgggagaat tcaaactaaa 840 aaggaagtgt caatcaaatg tactttgcgg gacttggtta gtaaaagagt aacatcacct 900 gaagactgga tgatgttaca accagatagt tatattgaaa tgatggcaca accaggaggt 960 gaaaatcttt taaaaaatac acttgaaatt tgtactttga ctttagcaag aacaaaaaca 1020 gcatttgaat taatacttga aaaagcagat aatactaaac taactaactt tgatcttgca 1080 aattctagaa catgtcaaat ttttagaatg cacggatgga attggattaa agtttgtcac 1140 gctatagcat gtgttttaaa tagacaaggt ggtaaaagaa atacagttct ttttcatgga 1200 ccagcaagta caggaaaatc tattattgct caagccatag cacaagctgt gggtaatgtt 1260 ggttgctata atgcagcaaa tgtaaatttt ccatttaatg actgtaccaa taaaaattta 1320 atttgggttg aagaagctgg taactttggt caacaagtta atcaatttaa agcaatttgt 1380 tctggacaaa caattagaat tgatcaaaaa ggtaaaggaa gtaagcaaat tgaaccaact 1440 ccagtaatta tgacaactaa tgaaaatata acaattgtaa gaattggatg tgaagaaaga 1500 cctgaacata cacaaccaat aagagacaga atgttgaaca ttaagttagt atgtaagctt 1560 ccaggagact ttggtttggt tgataaagaa gaatggcctt taatatgtgc atggttagtt 1620 aaacatggtt atcaatcaac catggctaac tacacacatc attggggaaa agtaccagag 1680 tgggatgaaa actgggcgga gcctaaaata caagaaggta taaattcacc aggttgcaaa 1740 gacttagaga cacaagcggc aagcaatcct cagagtcaag accacgttct aactcctctg 1800 actccggacg tagtggacct tgcactggaa ccgtggagta ctccagatac gcctattgca 1860 gaaactgcaa atcaacaatc aaaccaactt ggcgttactc acaaagacgt gcaagcgagt 1920 ccgacatggt ccgaaataga ggcagaccta agagccattt ttacttctga acaattggaa 1980 gaagattttc gagacgactt ggattaa 2007 // ID AB000059; SV 1; linear; genomic DNA; STD; VRL; 1755 BP. XX AC AB000059; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 4) XX DE Feline panleukopenia virus gene for capsid protein 2, complete cds, DE isolate: Som1. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-1755 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "evolutionary pattern of feline panleukopeina virus differs fromn that of RT canine parvovirus"; RL Unpublished. XX DR MD5; d4c32ff9d00f0b346302f1c827eab6fd. DR EuropePMC; PMC3059301; 21366901. XX FH Key Location/Qualifiers FH FT source 1..1755 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="Som1" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..1755 FT /product="capsid protein 2" FT /db_xref="GOA:Q84372" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR036952" FT /db_xref="UniProtKB/TrEMBL:Q84372" FT /protein_id="BAA19020.1" FT /translation="MSDGAVQPDGGQPAVRNERATGSGNGSGGGGGGGSGGVGISTGTF FT NNQTEFKFLENGWVEITANSSRLVHLNMPESENYKRVVVNNMDKTAVKGNMALDDTHVQ FT IVTPWSLVDANAWGVWFNPGDWQLIVNTMSELHLVSFEQEIFNVVLKTVSESATQPPTK FT VYNNDLTASLMVALDSNNTMPFTPAAMRSETLGFYPWKPTIPTPWRYYFQWDRTLIPSH FT TGTSGTPTNVYHGTDPDDVQFYTIENSVPVHLLRTGDEFATGTFFFDCKPCRLTHTWQT FT NRALGLPPFLNSLPQSEGATNFGDIGVQQDKRRGVTQMGNTDYITEATIMRPAEVGYSA FT PYYSFEASTQGPFKTPIAAGRGGAQTDENQAADGDPRYAFGRQHGQKTTTTGETPERFT FT YIAHQDTGRYPEGDWIQNINFNLPVTNDNVLLPTDPIGGKTGINYTNIFNTYGPLTALN FT NVPPVYPNGQIWDKEFDTDLKPRLHVNAPFVCQNNCPGQLFVKVAPNLTNEYDPDASAN FT MSRIVTYSDFWWKGKLVFKAKLRASHTWNPIQQMSINVDNQFNYVPNNIGAMKIVYEKS FT QLAPRKLY" XX SQ Sequence 1755 BP; 618 A; 271 C; 346 G; 520 T; 0 other; atgagtgatg gagcagttca accagacggt ggtcaacctg ctgtcagaaa tgaaagagct 60 acaggatctg ggaacgggtc tggaggcggg ggtggtggtg gttctggggg tgtggggatt 120 tctacgggta ctttcaataa tcagacggaa tttaaatttt tggaaaacgg gtgggtggaa 180 atcacagcaa actcaagcag acttgtacat ttaaatatgc cagaaagtga aaattataaa 240 agagtagttg taaataatat ggataaaact gcagttaaag gaaatatggc tttagatgat 300 actcatgtac aaattgtaac accttggtca ttggttgatg caaatgcttg gggagtttgg 360 tttaatccag gagattggca actaattgtt aatactatga gtgagttgca tttagttagt 420 tttgaacaag aaatttttaa tgttgtttta aagactgttt cagaatctgc tactcagcca 480 ccaactaaag tttataataa tgatttaact gcatcattga tggttgcatt agatagtaat 540 aatactatgc catttactcc agcagctatg agatctgaga cattgggttt ttatccatgg 600 aaaccaacca taccaactcc atggagatat tattttcaat gggatagaac attaatacca 660 tctcatactg gaactagtgg cacaccaaca aatgtatatc atggtacaga tccagatgat 720 gttcaatttt atactattga aaattctgtg ccagtacact tactaagaac aggtgatgaa 780 tttgctacag gaacattttt ttttgattgt aaaccatgta gactaacaca tacatggcaa 840 acaaatagag cattgggctt accaccattt ttaaattctt tgcctcaatc tgaaggagct 900 actaactttg gtgatatagg agttcaacaa gataaaagac gtggtgtaac tcaaatggga 960 aatacagact atattactga agctactatt atgagaccag ctgaggttgg ttatagtgca 1020 ccatactatt cttttgaagc gtctacacaa gggccattta aaacacctat tgcagcagga 1080 cgggggggag cgcaaacaga tgaaaatcaa gcagcagatg gtgatccaag atatgcattt 1140 ggtagacaac atggtcaaaa aactactaca acaggagaaa cacctgagag atttacatat 1200 atagcacatc aagatacagg aagatatcca gaaggagatt ggattcaaaa tattaacttt 1260 aaccttcctg taacaaatga taatgtattg ctaccaacag atccaattgg aggtaaaaca 1320 ggaattaact atactaatat atttaatact tatggtcctt taactgcatt aaataatgta 1380 ccaccagttt atccaaatgg tcaaatttgg gataaagaat ttgatactga cttaaaacca 1440 agacttcatg taaatgcacc atttgtttgt cagaataatt gtcctggtca attatttgta 1500 aaagttgcgc ctaatttaac gaatgaatat gatcctgatg catctgctaa tatgtcaaga 1560 attgtaactt attcagattt ttggtggaaa ggtaaattag tatttaaagc taaactaaga 1620 gcatctcata cttggaatcc aattcaacaa atgagtatta atgtagataa ccaatttaac 1680 tatgtaccaa ataatattgg agctatgaaa attgtatatg aaaaatctca actagcacct 1740 agaaaattat attaa 1755 // ID AB000060; SV 1; linear; genomic DNA; STD; VRL; 2007 BP. XX AC AB000060; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 3) XX DE Feline panleukopenia virus gene for nonstructural protein 1, complete cds, DE isolate: Som4. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-2007 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "Evolutionary pattern of feline panleukopenia virus differs from that of RT canine parvovirus"; RL Unpublished. XX DR MD5; 719512462f10cacf88bb42c79a34f6e1. XX FH Key Location/Qualifiers FH FT source 1..2007 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="Som4" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..2007 FT /product="nonstructural protein 1" FT /db_xref="GOA:P90484" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR021076" FT /db_xref="InterPro:IPR021972" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:P90484" FT /protein_id="BAA19021.1" FT /translation="MSGNQYTEEVMEGVNWLKKHAEDEAFSFVFKCDNVQLNGKDVRWN FT NYTKPIQNEELTSLIRGAQTAMDQTEEEEMDWESEVDSLAKKQVQTFDALIKKCLFEVF FT VSKNIEPNECVWFIQHEWGKDQGWHCHVLLHSKNLQQATGKWLRRQMNMYWSRWLVTLC FT SINLTPTEKIKLREIAEDSEWVTILTYRHKQTKKDYVKMVHFGNMIAYYFLTKKKIVHM FT TKESGYFLSTDSGWKFNFMKYQDRHTVSTLYTEQMKPETVETTVTTAQETKRGRIQTKK FT EVSIKCTLRDLVSKRVTSPEDWMMLQPDSYIEMMAQPGGENLLKNTLEICTLTLARTKT FT AFELILEKADNTKLTNFDLANSRTCQIFRMHGWNWIKVCHAIACVLNRQGGKRNTVLFH FT GPASTGKSIIAQAIAQAVGNVGCYNAANVNFPFNDCTNKNLIWVEEAGNFGQQVNQFKA FT ICSGQTIRIDQKGKGSKQIEPTPVIMTTNENITIVRIGCEERPEHTQPIRDRMLNIKLV FT CKLPGDFGLVDKEEWPLICAWLVKHGYQSTMANYTHHWGKVPEWDENWAEPKIQEGINS FT PGCKDLETQAASNPQSQDHVLTPLTPDVVDLALEPWSTPDTPIAETANQQSNQLGVTHK FT DVQASPTWSEIEADLRAIFTSEQLEEDFRDDLD" XX SQ Sequence 2007 BP; 765 A; 312 C; 405 G; 525 T; 0 other; atgtctggca accagtatac tgaggaagtt atggagggag taaattggtt aaagaaacat 60 gcagaagatg aagcattttc gtttgttttt aaatgtgaca acgtccaact aaatggaaag 120 gatgttcgct ggaacaacta taccaaacca attcaaaatg aagagctaac atctttaatt 180 agaggagcac aaacagcaat ggatcaaacc gaagaagaag aaatggactg ggaatcggaa 240 gttgatagtc tcgccaaaaa gcaagtacaa acttttgatg cattaattaa aaaatgtctt 300 tttgaagtct ttgtttctaa aaatatagaa ccaaatgaat gtgtttggtt tattcaacat 360 gaatggggaa aagatcaagg ctggcattgt catgttttac ttcatagtaa gaacttacaa 420 caagcaactg gtaaatggct acgcagacaa atgaatatgt attggagtag atggttggtg 480 actctttgtt cgataaattt aacaccaact gaaaagatta agctcagaga aattgcagaa 540 gatagtgaat gggtaactat attaacatac agacataagc aaacaaaaaa agactatgtt 600 aaaatggttc attttggaaa tatgatagca tattactttt taacaaagaa aaaaattgtc 660 cacatgacaa aagaaagtgg ctatttttta agtactgatt ctggttggaa atttaacttt 720 atgaagtatc aagacagaca tactgtcagc acactttaca ctgaacaaat gaaaccagaa 780 accgttgaaa ccacagtgac gacagcacag gaaacaaagc gcgggagaat tcaaactaaa 840 aaggaagtgt caatcaaatg tactttgcgg gacttggtta gtaaaagagt aacatcacct 900 gaagactgga tgatgttaca accagatagt tatattgaaa tgatggcaca accaggaggt 960 gaaaatcttt taaaaaatac acttgaaatt tgtactttga ctttagcaag aacaaaaaca 1020 gcatttgaat taatacttga aaaagcagat aatactaaac taactaactt tgatcttgca 1080 aattctagaa catgtcaaat ttttagaatg cacggatgga attggattaa agtttgtcac 1140 gctatagcat gtgttttaaa tagacaaggt ggtaaaagaa atacagttct ttttcatgga 1200 ccagcaagta caggaaaatc tattattgct caagccatag cacaagctgt gggtaatgtt 1260 ggttgctata atgcagcaaa tgtaaatttt ccatttaatg actgtaccaa taaaaattta 1320 atttgggttg aagaagctgg taactttggt caacaagtta atcaatttaa agcaatttgt 1380 tctggacaaa caattagaat tgatcaaaaa ggtaaaggaa gtaagcaaat tgaaccaact 1440 ccagtaatta tgacaactaa tgaaaatata acaattgtaa gaattggatg tgaagaaaga 1500 cctgaacata cacaaccaat aagagacaga atgttgaaca ttaagttagt atgtaagctt 1560 ccaggagact ttggtttggt tgataaagaa gaatggcctt taatatgtgc atggttagtt 1620 aaacatggct atcaatcaac catggctaac tacacacatc attggggaaa agtaccagag 1680 tgggatgaaa actgggcgga gcctaaaata caagaaggta taaattcacc aggttgcaaa 1740 gacttagaga cacaagcggc aagcaatcct cagagtcaag accacgttct aactcctctg 1800 actccggacg tagtggacct tgcactggaa ccgtggagta ctccagatac gcctattgca 1860 gaaactgcaa atcaacaatc aaaccaactt ggcgttactc acaaagacgt gcaagcgagt 1920 ccgacatggt ccgaaataga ggcagacctg agagccattt ttacttctga acaattggaa 1980 gaagattttc gagacgactt ggattaa 2007 // ID AB000061; SV 1; linear; genomic DNA; STD; VRL; 1755 BP. XX AC AB000061; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 4) XX DE Feline panleukopenia virus gene for capsid protein 2, complete cds, DE isolate: Som4. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-1755 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "Evolutionary pattern of feline panleukopenia virus differs from that of RT canine parvovirus"; RL Unpublished. XX DR MD5; 0cf674aad44e1dc45a75500acc7e3fbf. DR EuropePMC; PMC3059301; 21366901. XX FH Key Location/Qualifiers FH FT source 1..1755 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="Som4" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..1755 FT /product="capsid protein 2" FT /db_xref="GOA:Q84372" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR036952" FT /db_xref="UniProtKB/TrEMBL:Q84372" FT /protein_id="BAA19022.1" FT /translation="MSDGAVQPDGGQPAVRNERATGSGNGSGGGGGGGSGGVGISTGTF FT NNQTEFKFLENGWVEITANSSRLVHLNMPESENYKRVVVNNMDKTAVKGNMALDDTHVQ FT IVTPWSLVDANAWGVWFNPGDWQLIVNTMSELHLVSFEQEIFNVVLKTVSESATQPPTK FT VYNNDLTASLMVALDSNNTMPFTPAAMRSETLGFYPWKPTIPTPWRYYFQWDRTLIPSH FT TGTSGTPTNVYHGTDPDDVQFYTIENSVPVHLLRTGDEFATGTFFFDCKPCRLTHTWQT FT NRALGLPPFLNSLPQSEGATNFGDIGVQQDKRRGVTQMGNTDYITEATIMRPAEVGYSA FT PYYSFEASTQGPFKTPIAAGRGGAQTDENQAADGDPRYAFGRQHGQKTTTTGETPERFT FT YIAHQDTGRYPEGDWIQNINFNLPVTNDNVLLPTDPIGGKTGINYTNIFNTYGPLTALN FT NVPPVYPNGQIWDKEFDTDLKPRLHVNAPFVCQNNCPGQLFVKVAPNLTNEYDPDASAN FT MSRIVTYSDFWWKGKLVFKAKLRASHTWNPIQQMSINVDNQFNYVPNNIGAMKIVYEKS FT QLAPRKLY" XX SQ Sequence 1755 BP; 619 A; 271 C; 345 G; 520 T; 0 other; atgagtgatg gagcagttca accagacggt ggtcaacctg ctgtcagaaa tgaaagagct 60 acaggatctg ggaacgggtc tggaggcggg ggtggtggtg gttctggggg tgtggggatt 120 tctacgggta ctttcaataa tcagacggaa tttaaatttt tggaaaacgg gtgggtggaa 180 atcacagcaa actcaagcag acttgtacat ttaaatatgc cagaaagtga aaattataaa 240 agagtagttg taaataatat ggataaaact gcagttaaag gaaatatggc tttagatgat 300 actcatgtac aaattgtaac accttggtca ttggttgatg caaatgcttg gggagtttgg 360 tttaatccag gagattggca actaattgtt aatactatga gtgagttgca tttagttagt 420 tttgaacaag aaatttttaa tgttgtttta aagactgttt cagaatctgc tactcagcca 480 ccaactaaag tttataataa tgatttaact gcatcattga tggttgcatt agatagtaat 540 aatactatgc catttactcc agcagctatg agatctgaga cattgggttt ttatccatgg 600 aaaccaacca taccaactcc atggagatat tattttcaat gggatagaac attaatacca 660 tctcatactg gaactagtgg cacaccaaca aatgtatatc atggtacaga tccagatgat 720 gttcaatttt atactattga aaattctgtg ccagtacact tactaagaac aggtgatgaa 780 tttgctacag gaacattttt ttttgattgt aaaccatgta gactaacaca tacatggcaa 840 acaaatagag cattaggctt accaccattt ttaaattctt tgcctcaatc tgaaggagct 900 actaactttg gtgatatagg agttcaacaa gataaaagac gtggtgtaac tcaaatggga 960 aatacagact atattactga agctactatt atgagaccag ctgaggttgg ttatagtgca 1020 ccatactatt cttttgaagc gtctacacaa gggccattta aaacacctat tgcagcagga 1080 cgggggggag cgcaaacaga tgaaaatcaa gcagcagatg gtgatccaag atatgcattt 1140 ggtagacaac atggtcaaaa aactactaca acaggagaaa cacctgagag atttacatat 1200 atagcacatc aagatacagg aagatatcca gaaggagatt ggattcaaaa tattaacttt 1260 aaccttcctg taacaaatga taatgtattg ctaccaacag atccaattgg aggtaaaaca 1320 ggaattaact atactaatat atttaatact tatggtcctt taactgcatt aaataatgta 1380 ccaccagttt atccaaatgg tcaaatttgg gataaagaat ttgatactga cttaaaacca 1440 agacttcatg taaatgcacc atttgtttgt cagaataatt gtcctggtca attatttgta 1500 aaagttgcgc ctaatttaac gaatgaatat gatcctgatg catctgctaa tatgtcaaga 1560 attgtaactt attcagattt ttggtggaaa ggtaaattag tatttaaagc taaactaaga 1620 gcatctcata cttggaatcc aattcaacaa atgagtatta atgtagataa ccaatttaac 1680 tatgtaccaa ataatattgg agctatgaaa attgtatatg aaaaatctca actagcacct 1740 agaaaattat attaa 1755 // ID AB000062; SV 1; linear; genomic DNA; STD; VRL; 2007 BP. XX AC AB000062; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 3) XX DE Feline panleukopenia virus gene for nonstructural protein 1, complete cds, DE isolate: TU8. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-2007 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "Evolutinary pattern of feline panleukopeina virus differs that of canine RT parvovirus"; RL Unpublished. XX DR MD5; 8e9f92db6b6c8b48c5db42e0d38fbc47. XX FH Key Location/Qualifiers FH FT source 1..2007 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="TU8" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..2007 FT /product="nonstructural protein 1" FT /db_xref="GOA:P89516" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR021076" FT /db_xref="InterPro:IPR021972" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:P89516" FT /protein_id="BAA19023.1" FT /translation="MSGNQYTEEVMEGVNWLKKHAENEAFSFVFKCDNVQLNGKDVRWN FT NYTKPIQNEELTSLIRGAQTAMDQTEEEEMDWESEVDSLAKKQVQTFDALIKKCLFEVF FT VSKNIEPNECVWFIQHEWGKDQGWHCHVLLHSKNLQQATGKWLRRQMNMYWSRWLVTLC FT SVNLTPTEKIKLREIAEDSEWVTILTYRHKQTKKDYVKMVHFGNMIAYYFLTKKKIVHM FT TKESGYFLSTDSGWKFNFMKYQDRHTVSTLYTEQMKPETVETTVTTAQETKRGRIQTKK FT EVSIKCTLRDLVSKRVTSPEDWMMLQPDSYIEMMAQPGGENLLKNTLEICTLTLARTKT FT AFELILEKADNTKLTNFDLANSRTCQIFRMHGWNWIKVCHAIACVLNRQGGKRNTVLFH FT GPASTGKSIIAQAIAQAVGNVGCYNAANVNFPFNDCTNKNLIWVEEAGNFGQQVNQFKA FT ICSGQTIRIDQKGKGSKQIEPTPVIMTTNENITIVRIGCEERPEHTQPIRDRMLNIKLV FT CKLPGDFGLVDKEEWPLICAWLVKHGYQSTMANYTHHWGKVPEWDENWAEPKIQEGINS FT PGCKDLETQAASNPQSQDHVLTPLTPDVVDLALEPWSTPDTPIAETANQQSNQLGVTHK FT DVQASPTWSEIEADLRAIFTSEQLEEDFRDDLD" XX SQ Sequence 2007 BP; 764 A; 312 C; 407 G; 524 T; 0 other; atgtctggca accagtatac tgaggaagtt atggagggag taaattggtt aaagaaacat 60 gcagaaaatg aagcattttc gtttgttttt aaatgtgaca acgtccaact aaatggaaag 120 gatgttcgct ggaacaacta taccaaacca attcaaaatg aagagctaac atctttaata 180 agaggagcac aaacagcaat ggatcaaacc gaagaagaag aaatggactg ggaatcggaa 240 gttgatagtc tcgccaaaaa gcaagtacaa acttttgatg cattaattaa gaaatgtctt 300 tttgaagtct ttgtttctaa aaatatagaa ccaaatgaat gtgtttggtt tattcaacat 360 gaatggggaa aagatcaagg ctggcattgt catgttttac ttcatagtaa gaacttacaa 420 caagcaactg gtaaatggct acgcagacaa atgaatatgt attggagtag atggttggtg 480 actctttgtt cggtaaactt aacaccaact gaaaagatta agctcagaga aattgcagaa 540 gatagtgaat gggtgactat attaacatac agacataagc aaacaaaaaa agactatgtt 600 aaaatggttc attttggaaa tatgatagca tattactttt taacaaagaa aaaaattgtc 660 cacatgacaa aagaaagtgg ctatttttta agtactgatt ctggttggaa atttaacttt 720 atgaagtatc aagacagaca tactgtcagc acactttaca ctgaacaaat gaaaccagaa 780 accgttgaaa ccacagtgac gacagcacag gaaacaaagc gcgggagaat tcaaactaaa 840 aaggaagtgt cgatcaaatg tactttacgg gacttggtta gtaaaagagt aacatcacct 900 gaagactgga tgatgttaca accagatagt tatattgaaa tgatggcaca accaggaggt 960 gaaaatcttt taaaaaatac acttgaaatt tgtactttga ctttagcaag aacaaaaaca 1020 gcatttgaat taatacttga aaaagcagat aataccaaac taactaactt tgatcttgca 1080 aattctagaa catgtcaaat ttttagaatg cacggatgga attggattaa agtttgtcac 1140 gctatagcat gtgttttaaa tagacaaggt ggtaaaagaa atacagttct ttttcatgga 1200 ccagcaagta caggaaaatc tattattgct caagccatag cacaagctgt gggtaatgtt 1260 ggttgttata atgcagcaaa tgtaaatttt ccatttaatg actgtaccaa taaaaattta 1320 atttgggttg aagaagctgg taactttggt caacaagtta atcaatttaa agcaatttgt 1380 tctggacaaa caattagaat tgatcaaaaa ggtaaaggaa gtaagcaaat tgaaccaact 1440 ccagtaatta tgacaactaa tgaaaatata acaattgtaa gaattggatg tgaagaaaga 1500 cctgaacata cacaaccaat aagagacaga atgttgaaca ttaagttagt atgtaagctt 1560 ccaggagact ttggtttggt tgataaagaa gaatggcctt taatatgtgc atggttagtt 1620 aagcatggtt atcaatcaac catggctaac tacacacatc attggggaaa agtaccagaa 1680 tgggatgaaa actgggcgga gcctaaaata caagaaggta taaattcacc aggttgcaaa 1740 gacttagaga cacaagcggc aagcaatcct cagagtcaag accacgttct aactcctctg 1800 actccggacg tagtggacct tgcactggaa ccgtggagta ctccagatac gcctattgca 1860 gaaactgcaa atcaacaatc aaaccaactt ggcgttactc acaaagacgt gcaagcgagt 1920 ccgacatggt ccgaaataga ggcagacctg agagccattt ttacttctga acaattggaa 1980 gaagattttc gagacgactt ggattaa 2007 // ID AB000063; SV 1; linear; genomic DNA; STD; VRL; 2007 BP. XX AC AB000063; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 3) XX DE Feline panleukopenia virus gene for nonstructural protein 1, complete cds, DE isolate: TU12. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-2007 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "Evolutionary pattern of feline panleukopenia virus differs from that of RT canine parvovirus"; RL Unpublished. XX DR MD5; 0df2d4c6de70dd7c9fd893ed03302440. XX FH Key Location/Qualifiers FH FT source 1..2007 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="TU12" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..2007 FT /product="nonstructural protein 1" FT /db_xref="GOA:P90449" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR021076" FT /db_xref="InterPro:IPR021972" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:P90449" FT /protein_id="BAA19024.1" FT /translation="MSGNQYTEEVMEGVNWLKKHAENEAFSFVFKCDNVQLNGKDVRWN FT NYTKPIQNEELTSLIRGAQTAMDQTEEEEMDWESEVDSLAKKQVQTFDALIKKCLFEVF FT VSKNIEPNECVWFIQHEWGKDQGWHCHVLLHSKNLQQATGKWLRRQMNMYWSRWLVTLC FT SVNLTPTEKIKLREIAEDSEWVTILTYRHKQTKKDYVKMVHFGNMIAYYFLTKKKIVHM FT TKESGYFLSTDSGWKFNFMKYQDRHTVSTLYTEQMKPETVETTVTTAQETKRGRIQTKK FT EVSIKCTLRDLVSKRVTSPEDWMMLQPDSYIEMMAQPGGENLLKNTLEICTLTLARTKT FT AFELILEKADNTKLTNFDLANSRTCQIFRMHGWNWIKVCHAIACVLNRQGGKRNTVLFH FT GPASTGKSIIAQAIAQAVGNVGCYNAANVNFPFNDCTNKNLIWIEEAGNFGQQVNQFKA FT ICSGQTIRIDQKGKGSKQIEPTPVIMTTNENITIVRIGCEERPEHTQPIRDRMLNIKLV FT CKLPGDFGLVDKEEWPLICAWLVKHGYQSTMANYTHHWGKVPEWDENWAEPKIQEGINS FT PGCKDLETQAASNPQSQDHVLTPLTPDVVDLALEPWSTPDTPIAETANQQSNQLGVTHK FT DVQASPTWSEIEADLRAIFTSEQLEEDFRDDLD" XX SQ Sequence 2007 BP; 767 A; 311 C; 403 G; 526 T; 0 other; atgtctggca accagtatac tgaggaagtt atggagggag taaattggtt aaagaaacat 60 gcagaaaatg aagcattttc gtttgttttt aaatgtgaca acgtccaact aaatggaaag 120 gatgttcgct ggaacaacta taccaaacca attcaaaatg aagagctaac atctttaatt 180 agaggagcac aaacagcaat ggatcaaacc gaagaagaag aaatggactg ggaatcggaa 240 gttgatagtc tcgccaaaaa gcaagtacaa acttttgatg cattaattaa aaaatgtctt 300 tttgaagtct ttgtttctaa aaatatagaa ccaaatgaat gtgtttggtt tattcaacat 360 gaatggggaa aagatcaagg ctggcattgt catgttttac ttcatagtaa gaacttacaa 420 caagcaactg gtaaatggct acgcagacaa atgaatatgt attggagtag atggttggtg 480 actctttgtt cggtaaactt aacaccaact gaaaagatta agctcagaga aattgcagaa 540 gatagtgaat gggtaactat attaacatac agacataagc aaacaaaaaa agactatgtt 600 aaaatggttc attttggaaa tatgatagca tattactttt taacaaagaa aaaaattgtc 660 cacatgacaa aagaaagtgg ctatttttta agtactgatt ctggttggaa atttaacttt 720 atgaagtatc aagacagaca tactgtcagc acactttaca ctgaacaaat gaaaccagaa 780 accgttgaaa ccacagtgac gacagcacag gaaacaaagc gcgggagaat tcaaactaaa 840 aaggaagtgt caatcaaatg tactttgcgg gacttggtta gtaaaagagt aacatcacct 900 gaagactgga tgatgttaca accagatagt tatattgaaa tgatggcaca accaggaggt 960 gaaaatcttt taaaaaatac acttgaaatt tgtactttga ctttagcaag aacaaaaaca 1020 gcatttgaat taatacttga aaaagcagat aatactaaac taactaactt tgatcttgca 1080 aattctagaa catgtcaaat ttttagaatg cacggatgga attggattaa agtttgtcac 1140 gctatagcat gtgttttaaa tagacaaggt ggtaaaagaa atacagttct ttttcatgga 1200 ccagcaagta caggaaaatc tattattgct caagccatag cacaagctgt gggtaatgtt 1260 ggttgttata atgcagcaaa tgtaaatttt ccatttaatg actgtaccaa taaaaattta 1320 atttggattg aagaagctgg taactttggt caacaagtta atcaatttaa agcaatttgt 1380 tctggacaaa caattagaat tgatcaaaaa ggtaaaggaa gtaagcaaat tgaaccaact 1440 ccagtaatta tgacaactaa tgaaaatata acaattgtaa gaattggatg tgaagaaaga 1500 cctgaacata cacaaccaat aagagacaga atgttgaaca ttaagttagt atgtaagctt 1560 ccaggagact ttggtttggt tgataaagaa gaatggcctt taatatgtgc atggttagtt 1620 aaacatggtt atcaatcaac catggctaac tatacacatc attggggaaa agtaccagaa 1680 tgggacgaaa actgggcgga gcctaaaata caagaaggta taaattcacc aggttgcaaa 1740 gacttagaga cacaagcggc aagcaatcct cagagtcaag accacgttct aactcctctg 1800 actccggacg tagtggacct tgcactggaa ccgtggagta ctccagatac gcctattgca 1860 gaaactgcaa atcaacaatc aaaccaactt ggcgttactc acaaagacgt gcaagcgagt 1920 ccgacatggt ccgaaataga ggcagacctg agagccattt ttacttctga acaattggaa 1980 gaagattttc gagacgactt ggattaa 2007 // ID AB000064; SV 1; linear; genomic DNA; STD; VRL; 1755 BP. XX AC AB000064; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 4) XX DE Feline panleukopenia virus gene for capsid protein 2, complete cds, DE isolate: TU12. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-1755 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "Evolutionary pattern of feline panleukopenia virus differs from canine RT parvovirus"; RL Unpublished. XX DR MD5; 3727236f6b721c4bddf989d295664cb0. DR EuropePMC; PMC3059301; 21366901. XX FH Key Location/Qualifiers FH FT source 1..1755 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="TU12" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..1755 FT /product="capsid protein 2" FT /db_xref="GOA:P90480" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR036952" FT /db_xref="UniProtKB/TrEMBL:P90480" FT /protein_id="BAA19025.1" FT /translation="MSDGAVQPDGGQPAVRNERATGSGNGSGGGGGGGSGGVGISTGTF FT NNQTEFKFLENGWVEITANSSRLVHLNMPESENYKRVVVINMDKTAVKGNMALDDTHVQ FT IVTPWSLVDANAWGVWFNPGDWQLIVNTMSELHLVSFEQEIFNVVLKTVSESATQPPTK FT VYNNDLTASLMVALDSNNTMPFTPAAMRSETLGFYPWKPTIPTPWRYYFQWDRTLIPSH FT TGTSGTPTNVYHGTDPDDVQFYTIENSVPVHLLRTGDEFATGTFFFDCKPCRLTHTWQT FT NRALGLPPFLNSLPQSEGATNFGDIGVQQDKRRGVTQMGNTDYITEATIMRPAEVGYSA FT PYYSFEASTQGPFKTPIAAGRGGAQTDENQAADGDPRYAFGRQHGQKTTTTGETPERFT FT YIAHQDTGRYPEGDWIQNINFNLPVTNDNVLLPTDPIGGKTGINYTNIFNTYGPLTALN FT NVPPVYPNGQIWDKEFDTDLKPRLHVNAPFVCQNNCPGQLFVKVAPNLTNEYDPDASAN FT MSRIVTYSDFWWKGKLVFKAKLRASHTWNPIQQMSINVDNQFNYVPNNIGAMKIVYEKS FT QLAPRKLY" XX SQ Sequence 1755 BP; 615 A; 271 C; 347 G; 522 T; 0 other; atgagtgatg gagcagttca accagacggt ggtcaacctg ctgtcagaaa tgaaagagct 60 acaggatctg ggaacgggtc tggaggcggg ggtggtggtg gttctggggg tgtggggatt 120 tctacgggta ctttcaataa tcagacggaa tttaaatttt tggaaaacgg gtgggtggaa 180 atcacagcaa actcaagcag acttgtacat ttaaatatgc cagaaagtga aaattataaa 240 agagtagttg taattaatat ggataaaact gcagttaaag gaaacatggc tttagatgat 300 actcatgtac aaattgtaac accttggtca ttggttgatg caaatgcttg gggagtttgg 360 tttaatccag gagattggca actaattgtt aatactatga gtgagttgca tttagttagt 420 tttgaacaag aaatttttaa tgttgtttta aagactgttt cagaatctgc tactcagcca 480 ccaactaaag tttataataa tgatttaact gcatcattga tggttgcatt agatagtaat 540 aatactatgc catttactcc agcagctatg agatctgaga cattgggttt ttatccatgg 600 aaaccaacca taccaactcc atggagatat tattttcaat gggatagaac attaatacca 660 tctcatactg gaactagtgg cacaccaaca aatgtatatc atggtacaga tccagatgat 720 gttcaatttt atactattga aaattctgtg ccagtacact tactaagaac aggtgatgaa 780 tttgctacag gaacattttt ttttgattgt aaaccatgta gactaacaca tacatggcaa 840 acaaatagag cattgggctt accaccattt ttaaattctt tgcctcaatc tgaaggagct 900 actaactttg gtgatatagg agttcaacaa gataaaagac gtggtgtaac tcaaatggga 960 aatacagact atattactga agctactatt atgagaccag ctgaggttgg ttatagtgca 1020 ccatattatt cttttgaagc gtctacacaa gggccattta aaacacctat tgcagcagga 1080 cgggggggag cgcaaacaga tgaaaatcaa gcagcagatg gtgatccaag atatgcattt 1140 ggtagacaac atggtcaaaa aactactaca acaggagaaa cacctgagag atttacatat 1200 attgcacatc aagatacagg aagatatcca gaaggagatt ggattcaaaa tattaacttt 1260 aaccttcctg taacaaatga taatgtattg ctaccaacag atccaattgg gggtaaaaca 1320 ggaattaact atactaatat atttaatact tatggtcctt taactgcatt aaataatgtg 1380 ccaccagttt atccaaatgg tcaaatttgg gataaagaat ttgatactga cttaaaacca 1440 agacttcatg taaatgcacc atttgtttgt caaaataatt gtcctggtca attatttgta 1500 aaagttgcgc ctaatttaac gaatgaatat gatcctgatg catctgctaa tatgtcaaga 1560 attgtaactt attcagattt ttggtggaaa ggtaaattag tatttaaagc taaactaaga 1620 gcatctcata cttggaatcc aattcaacaa atgagtatta atgtagataa ccaatttaac 1680 tatgtaccaa ataatattgg agctatgaaa attgtatatg aaaaatctca actagcacct 1740 agaaaattat attaa 1755 // ID AB000065; SV 1; linear; genomic DNA; STD; VRL; 2007 BP. XX AC AB000065; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 3) XX DE Feline panleukopenia virus gene for nonstructural protein 1, complete cds, DE isolate: TU2. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-2007 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "Evolutionary pattern of feline panleukopenia virus differs from that of RT canine parvovirus"; RL Unpublished. XX DR MD5; 2795245cd64cf9c6eb850c0e86dd2c27. XX FH Key Location/Qualifiers FH FT source 1..2007 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="TU2" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..2007 FT /product="nonstructural protein 1" FT /db_xref="GOA:P90472" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR021076" FT /db_xref="InterPro:IPR021972" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:P90472" FT /protein_id="BAA19026.1" FT /translation="MSGNQYTEEVMEGVNWLKKHAENEAFSFVFKCDNVQLNGKDVRWN FT NYTKPIQNEELTSLIRGAQTAMDQTEEEEMDWESEVDSLAKKQVQTFDALIKKCLFEVF FT VSKNIEPNECVWFIQHEWGKDQGWHCHVLLHSKNLQQATGKWLRRQMNMYWSRWLVTLC FT SVNLTPTEKIKLREIAEDSEWVTILTYRHKQTKKDYVKMVHFGNMIAYYFLTKKKIVHM FT TKESGYFLSTDSGWKFNFMKYQDRHTVSTLYTEQMKPETVETTVTTAQETKRGRIQTKK FT EVSIKCTLRDLVSKRVTSPEDWMMLQPDSYIEMMAQPGGENLLKNTLEICTLTLARTKT FT AFELILEKADNTKLTNFDLANSRTCQIFRMHGWNWIKVCHAIACVLNRQGGKRNTVLFH FT GPASTGKSIIAQAIAQAVGNVGCYNAANVNFPFNDCTNKNLIWIEEAGNFGQQVNQFKA FT ICSGQTIRIDQKGKGSKQIEPTPVIMTTNENITIVRIGCEERPEHTQPIRDRMLNIKLV FT CKLPGDFGLVDKEEWPLICAWLVKHGYQSTMANYTHHWGKVPEWDENWAEPKIQKGVNS FT PGCKDLETEAASNPQSQDHVLTPLTPDVVDLALEPWSTPDTPIAETANQQSNQLGVTHK FT DVQASPTWSEIEADLRAIFTSEQLEEDFRDDLD" XX SQ Sequence 2007 BP; 767 A; 310 C; 404 G; 526 T; 0 other; atgtctggca accagtatac tgaggaagtt atggagggag taaattggtt aaagaaacat 60 gcagaaaatg aagcattttc gtttgttttt aaatgtgaca acgtccaact aaatggaaag 120 gatgttcgct ggaacaacta taccaaacca attcaaaatg aagagctaac atctttaatt 180 agaggagcac aaacagcaat ggatcaaacc gaagaagaag aaatggactg ggaatcggaa 240 gttgatagtc tcgccaaaaa gcaagtacaa acttttgatg cattaattaa aaaatgtctt 300 tttgaagtct ttgtttctaa aaatatagaa ccaaatgaat gtgtttggtt tattcaacat 360 gaatggggaa aagatcaagg ctggcattgt catgttttac ttcatagtaa gaacttacaa 420 caagcaactg gtaaatggct acgcagacaa atgaatatgt attggagtag atggttggtg 480 actctttgtt cggtaaactt aacaccaact gaaaagatta agctcagaga aattgcagaa 540 gatagtgaat gggtaactat attaacatac agacataagc aaacaaaaaa agactatgtt 600 aaaatggttc attttggaaa tatgatagca tattactttt taacaaagaa aaaaattgtc 660 cacatgacaa aagaaagtgg ctatttttta agtactgatt ctggttggaa atttaacttt 720 atgaagtatc aagacagaca tactgtcagc acactttaca ctgaacaaat gaaaccagaa 780 accgttgaaa ccacagtgac gacagcacag gaaacaaagc gcgggagaat tcaaactaaa 840 aaggaagtgt caatcaaatg tactttgcgg gacttggtta gtaaaagagt aacatcacct 900 gaagactgga tgatgttaca accagatagt tatattgaaa tgatggcaca accaggaggt 960 gaaaatcttt taaaaaatac acttgaaatt tgtactttga ctttagcaag aacaaaaaca 1020 gcatttgaat taatacttga aaaagcagat aatactaaac taactaactt tgatcttgca 1080 aattctagaa catgtcaaat ttttagaatg cacggatgga attggattaa agtttgtcac 1140 gctatagcat gtgttttaaa tagacaaggt ggtaaaagaa atacagttct ttttcatgga 1200 ccagcaagta caggaaaatc tattattgct caagccatag cacaagctgt gggtaatgtt 1260 ggttgttata atgcagcaaa tgtaaatttt ccatttaatg actgtaccaa taaaaattta 1320 atttggattg aagaagctgg taactttggt caacaagtta atcaatttaa agcaatttgt 1380 tctggacaaa caattagaat tgatcaaaaa ggtaaaggaa gtaagcaaat tgaaccaact 1440 ccagtaatta tgacaactaa tgaaaatata acaattgtaa gaattggatg tgaagaaaga 1500 cctgaacata cacaaccaat aagagacaga atgttgaaca ttaagttagt atgtaagctt 1560 ccaggagact ttggtttggt tgataaagaa gaatggcctt taatatgtgc atggttagtt 1620 aaacatggtt atcaatcaac catggctaac tatacacatc attggggaaa agtaccagaa 1680 tgggacgaaa actgggcgga gcctaaaata caaaaaggtg taaattcacc aggttgcaaa 1740 gacttagaga cagaagcggc aagcaatcct cagagtcaag accacgttct aactcctctg 1800 actccggacg tagtggacct tgcactggaa ccgtggagta ctccagatac gcctattgca 1860 gaaactgcaa atcaacaatc aaaccaactt ggcgttactc acaaagacgt gcaagcgagt 1920 ccgacatggt ccgaaataga ggcagacctg agagccattt ttacttctga acaattggaa 1980 gaagattttc gagacgactt ggattaa 2007 // ID AB000066; SV 1; linear; genomic DNA; STD; VRL; 1755 BP. XX AC AB000066; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 4) XX DE Feline panleukopenia virus gene for capsid protein 2, complete cds, DE isolate: TU2. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-1755 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "Evolutionary pattern of feline panleukopenia virus differs from that of RT canine parvovirus"; RL Unpublished. XX DR MD5; 14ebf1e18adc2be6350ab57a7481b6a5. DR EuropePMC; PMC3059301; 21366901. XX FH Key Location/Qualifiers FH FT source 1..1755 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="TU2" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..1755 FT /product="capsid protein 2" FT /db_xref="GOA:P90480" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR036952" FT /db_xref="UniProtKB/TrEMBL:P90480" FT /protein_id="BAA19027.1" FT /translation="MSDGAVQPDGGQPAVRNERATGSGNGSGGGGGGGSGGVGISTGTF FT NNQTEFKFLENGWVEITANSSRLVHLNMPESENYKRVVVINMDKTAVKGNMALDDTHVQ FT IVTPWSLVDANAWGVWFNPGDWQLIVNTMSELHLVSFEQEIFNVVLKTVSESATQPPTK FT VYNNDLTASLMVALDSNNTMPFTPAAMRSETLGFYPWKPTIPTPWRYYFQWDRTLIPSH FT TGTSGTPTNVYHGTDPDDVQFYTIENSVPVHLLRTGDEFATGTFFFDCKPCRLTHTWQT FT NRALGLPPFLNSLPQSEGATNFGDIGVQQDKRRGVTQMGNTDYITEATIMRPAEVGYSA FT PYYSFEASTQGPFKTPIAAGRGGAQTDENQAADGDPRYAFGRQHGQKTTTTGETPERFT FT YIAHQDTGRYPEGDWIQNINFNLPVTNDNVLLPTDPIGGKTGINYTNIFNTYGPLTALN FT NVPPVYPNGQIWDKEFDTDLKPRLHVNAPFVCQNNCPGQLFVKVAPNLTNEYDPDASAN FT MSRIVTYSDFWWKGKLVFKAKLRASHTWNPIQQMSINVDNQFNYVPNNIGAMKIVYEKS FT QLAPRKLY" XX SQ Sequence 1755 BP; 617 A; 271 C; 346 G; 521 T; 0 other; atgagtgatg gagcagttca accagacggt ggtcaacctg ctgtcagaaa tgaaagagct 60 acaggatctg ggaacgggtc tggaggcggg ggtggtggtg gttctggggg tgtggggatt 120 tctacgggta ctttcaataa tcagacggaa tttaaatttt tggaaaacgg gtgggtggaa 180 atcacagcaa actcaagcag acttgtacat ttaaatatgc cagaaagtga aaattataaa 240 agagtagttg taattaatat ggataaaact gcagttaaag gaaacatggc tttagatgat 300 actcatgtac aaattgtaac accttggtca ttggttgatg caaatgcttg gggagtttgg 360 tttaatccag gagattggca actaattgtt aatactatga gtgagttgca tttagttagt 420 tttgaacaag aaatttttaa tgttgtttta aagactgttt cagaatctgc tactcagcca 480 ccaactaaag tttataataa tgatttaact gcatcattga tggttgcatt agatagtaat 540 aatactatgc catttactcc agcagctatg agatctgaga cattgggttt ttatccatgg 600 aaaccaacca taccaactcc atggagatat tattttcaat gggatagaac attaatacca 660 tctcatactg gaactagtgg cacaccaaca aatgtatatc atggtacaga tccagatgat 720 gttcaatttt atactattga aaattctgtg ccagtacact tactaagaac aggtgatgaa 780 tttgctacag gaacattttt ttttgattgt aaaccatgta gactaacaca tacatggcaa 840 acaaatagag cattgggctt accaccattt ttaaattctt tgcctcaatc tgaaggagct 900 actaactttg gtgatatagg agttcaacaa gataaaagac gtggtgtaac tcaaatggga 960 aatacagact atattactga agctactatt atgagaccag ctgaggttgg ttatagtgca 1020 ccatattatt cttttgaagc gtctacacaa gggccattta aaacacctat tgcagcagga 1080 cgggggggag cgcaaacaga tgaaaatcaa gcagcagatg gtgatccaag atatgcattt 1140 ggtagacaac atggtcaaaa aactactaca acaggagaaa cacctgagag atttacatat 1200 atagcacatc aagatacagg aagatatcca gaaggagatt ggattcaaaa tattaacttt 1260 aaccttcctg taacaaatga taatgtattg ctaccaacag atccaattgg gggtaaaaca 1320 ggaattaact atactaatat atttaatact tatggtcctt taactgcatt aaataatgta 1380 ccaccagttt atccaaatgg tcaaatttgg gataaagaat ttgatactga cttaaaacca 1440 agacttcatg taaatgcacc atttgtttgt caaaataatt gtcctggtca attatttgta 1500 aaagttgcgc ctaatttaac gaatgaatat gatcctgatg catctgctaa tatgtcaaga 1560 attgtaactt attcagattt ttggtggaaa ggtaaattag tatttaaagc taaactaaga 1620 gcatctcata cttggaatcc aattcaacaa atgagtatta atgtagataa ccaatttaac 1680 tatgtaccaa ataatattgg agctatgaaa attgtatatg aaaaatctca actagcacct 1740 agaaaattat attaa 1755 // ID AB000067; SV 1; linear; genomic DNA; STD; VRL; 2007 BP. XX AC AB000067; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 3) XX DE Feline panleukopenia virus gene for nonstructural protein 1, complete cds, DE isolate: TU4. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-2007 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "Evolutionary pattern of feline panleukopenia virus differs from that of RT canine parvovirus"; RL Unpublished. XX DR MD5; 2795245cd64cf9c6eb850c0e86dd2c27. XX FH Key Location/Qualifiers FH FT source 1..2007 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="TU4" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..2007 FT /product="nonstructural protein 1" FT /db_xref="GOA:P90472" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR021076" FT /db_xref="InterPro:IPR021972" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:P90472" FT /protein_id="BAA19028.1" FT /translation="MSGNQYTEEVMEGVNWLKKHAENEAFSFVFKCDNVQLNGKDVRWN FT NYTKPIQNEELTSLIRGAQTAMDQTEEEEMDWESEVDSLAKKQVQTFDALIKKCLFEVF FT VSKNIEPNECVWFIQHEWGKDQGWHCHVLLHSKNLQQATGKWLRRQMNMYWSRWLVTLC FT SVNLTPTEKIKLREIAEDSEWVTILTYRHKQTKKDYVKMVHFGNMIAYYFLTKKKIVHM FT TKESGYFLSTDSGWKFNFMKYQDRHTVSTLYTEQMKPETVETTVTTAQETKRGRIQTKK FT EVSIKCTLRDLVSKRVTSPEDWMMLQPDSYIEMMAQPGGENLLKNTLEICTLTLARTKT FT AFELILEKADNTKLTNFDLANSRTCQIFRMHGWNWIKVCHAIACVLNRQGGKRNTVLFH FT GPASTGKSIIAQAIAQAVGNVGCYNAANVNFPFNDCTNKNLIWIEEAGNFGQQVNQFKA FT ICSGQTIRIDQKGKGSKQIEPTPVIMTTNENITIVRIGCEERPEHTQPIRDRMLNIKLV FT CKLPGDFGLVDKEEWPLICAWLVKHGYQSTMANYTHHWGKVPEWDENWAEPKIQKGVNS FT PGCKDLETEAASNPQSQDHVLTPLTPDVVDLALEPWSTPDTPIAETANQQSNQLGVTHK FT DVQASPTWSEIEADLRAIFTSEQLEEDFRDDLD" XX SQ Sequence 2007 BP; 767 A; 310 C; 404 G; 526 T; 0 other; atgtctggca accagtatac tgaggaagtt atggagggag taaattggtt aaagaaacat 60 gcagaaaatg aagcattttc gtttgttttt aaatgtgaca acgtccaact aaatggaaag 120 gatgttcgct ggaacaacta taccaaacca attcaaaatg aagagctaac atctttaatt 180 agaggagcac aaacagcaat ggatcaaacc gaagaagaag aaatggactg ggaatcggaa 240 gttgatagtc tcgccaaaaa gcaagtacaa acttttgatg cattaattaa aaaatgtctt 300 tttgaagtct ttgtttctaa aaatatagaa ccaaatgaat gtgtttggtt tattcaacat 360 gaatggggaa aagatcaagg ctggcattgt catgttttac ttcatagtaa gaacttacaa 420 caagcaactg gtaaatggct acgcagacaa atgaatatgt attggagtag atggttggtg 480 actctttgtt cggtaaactt aacaccaact gaaaagatta agctcagaga aattgcagaa 540 gatagtgaat gggtaactat attaacatac agacataagc aaacaaaaaa agactatgtt 600 aaaatggttc attttggaaa tatgatagca tattactttt taacaaagaa aaaaattgtc 660 cacatgacaa aagaaagtgg ctatttttta agtactgatt ctggttggaa atttaacttt 720 atgaagtatc aagacagaca tactgtcagc acactttaca ctgaacaaat gaaaccagaa 780 accgttgaaa ccacagtgac gacagcacag gaaacaaagc gcgggagaat tcaaactaaa 840 aaggaagtgt caatcaaatg tactttgcgg gacttggtta gtaaaagagt aacatcacct 900 gaagactgga tgatgttaca accagatagt tatattgaaa tgatggcaca accaggaggt 960 gaaaatcttt taaaaaatac acttgaaatt tgtactttga ctttagcaag aacaaaaaca 1020 gcatttgaat taatacttga aaaagcagat aatactaaac taactaactt tgatcttgca 1080 aattctagaa catgtcaaat ttttagaatg cacggatgga attggattaa agtttgtcac 1140 gctatagcat gtgttttaaa tagacaaggt ggtaaaagaa atacagttct ttttcatgga 1200 ccagcaagta caggaaaatc tattattgct caagccatag cacaagctgt gggtaatgtt 1260 ggttgttata atgcagcaaa tgtaaatttt ccatttaatg actgtaccaa taaaaattta 1320 atttggattg aagaagctgg taactttggt caacaagtta atcaatttaa agcaatttgt 1380 tctggacaaa caattagaat tgatcaaaaa ggtaaaggaa gtaagcaaat tgaaccaact 1440 ccagtaatta tgacaactaa tgaaaatata acaattgtaa gaattggatg tgaagaaaga 1500 cctgaacata cacaaccaat aagagacaga atgttgaaca ttaagttagt atgtaagctt 1560 ccaggagact ttggtttggt tgataaagaa gaatggcctt taatatgtgc atggttagtt 1620 aaacatggtt atcaatcaac catggctaac tatacacatc attggggaaa agtaccagaa 1680 tgggacgaaa actgggcgga gcctaaaata caaaaaggtg taaattcacc aggttgcaaa 1740 gacttagaga cagaagcggc aagcaatcct cagagtcaag accacgttct aactcctctg 1800 actccggacg tagtggacct tgcactggaa ccgtggagta ctccagatac gcctattgca 1860 gaaactgcaa atcaacaatc aaaccaactt ggcgttactc acaaagacgt gcaagcgagt 1920 ccgacatggt ccgaaataga ggcagacctg agagccattt ttacttctga acaattggaa 1980 gaagattttc gagacgactt ggattaa 2007 // ID AB000068; SV 1; linear; genomic DNA; STD; VRL; 1755 BP. XX AC AB000068; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 4) XX DE Feline panleukopenia virus gene for capsid protein 2, complete cds, DE isolate: TU4. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-1755 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "evolutionary pattern of feline panleukopenia virus differs from that of RT canine parvovirus"; RL Unpublished. XX DR MD5; c55daa50ccbee02324dbfef0495525cd. DR EuropePMC; PMC3059301; 21366901. XX FH Key Location/Qualifiers FH FT source 1..1755 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="TU4" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..1755 FT /product="capsid protein 2" FT /db_xref="GOA:P90505" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR036952" FT /db_xref="UniProtKB/TrEMBL:P90505" FT /protein_id="BAA19029.1" FT /translation="MSDGAVQPDGGQPAVRNERATGSGNGSGGGGGGGSGGVGISTGTF FT NNQTEFKFLENGWVEITANSSRLVHLNMPESENYKRVVVNNMDKTAVKGNMALDDTHVQ FT IVTPWSLVDANAWGVWFNPGDWQLIVNTMSELHLVSFEQEIFNVVLKTVSESATQPPTK FT VYNNDLTASLMVALDSNNTMPFTPAAMRSETLGFYPWKPTIPTPWRYYFQWDRTLIPSH FT TGTSGTPTNVYYGTDPDDVQFYTIENSVPVHLLRTGDEFATGTFFFDCKPCRLTHTWQT FT NRALGLPPFLNSLPQSEGATNFGDIGVQQDKRRGVTQMGNTDYITEATIMRPAEVGYSA FT PYYSFEASTQGPFKTPIAAGRGGAQTDENQAADGDPRYAFGRQHGQKTTTTGETPERFT FT YIAHQDTGRYPEGDWIQNINFNLPVTNDNVLLPTDPIGGKTGINYTNIFNTYGPLTALN FT NVPPVYPNGQIWDKEFDTDLKPRLHVNAPFVCQNNCPGQLFVKVAPNLTNEYDPDASAN FT MSRIVTYSDFWWKGKLVFKAKLRASHTWNPIQQMSINVDNQFNYVPNNIGAMKIVYEKS FT QLAPRKLY" XX SQ Sequence 1755 BP; 618 A; 270 C; 345 G; 522 T; 0 other; atgagtgatg gagcagttca accagacggt ggtcaacctg ctgtcagaaa tgaaagagct 60 acaggatctg ggaacgggtc tggaggcggg ggtggtggtg gttctggggg tgtggggatt 120 tctacgggta ctttcaataa tcagacggaa tttaaatttt tggaaaacgg gtgggtggaa 180 atcacagcaa actcaagcag acttgtacat ttaaatatgc cagaaagtga aaattataaa 240 agagtagttg taaataatat ggataaaact gcagttaaag gaaacatggc tttagatgat 300 actcatgtac aaattgtaac accttggtca ttggttgatg caaatgcttg gggagtttgg 360 tttaatccag gagattggca actaattgtt aatactatga gtgagttgca tttagttagt 420 tttgaacaag aaatttttaa tgttgtttta aagactgttt cagaatctgc tactcagcca 480 ccaactaaag tttataataa tgatttaact gcatcattaa tggttgcatt agatagtaat 540 aatactatgc catttactcc agcagctatg agatctgaga cattgggttt ttatccatgg 600 aaaccaacca taccaactcc atggagatat tattttcaat gggatagaac attaatacca 660 tctcatactg gaactagtgg cacaccaaca aatgtatatt atggtacaga tccagatgat 720 gttcaatttt atactattga aaattctgtg ccagtacact tactaagaac aggtgatgaa 780 tttgctacag gaacattttt ttttgattgt aaaccatgta gactaacaca tacatggcaa 840 acaaatagag cattgggctt accaccattt ttaaattctt tgcctcaatc tgaaggagct 900 actaactttg gtgatatagg agttcaacaa gataaaagac gtggtgtaac tcaaatggga 960 aatacagact atattactga agctactatt atgagaccag ctgaggttgg ttatagtgca 1020 ccatattatt cttttgaagc gtctacacaa gggccattta aaacacctat tgcagcagga 1080 cgggggggag cgcaaacaga tgaaaatcaa gcagcagatg gtgatccaag atatgcattt 1140 ggtagacaac atggtcaaaa aactactaca acaggagaaa cacctgagag atttacatat 1200 attgcacatc aagatacagg aagatatcca gaaggagatt ggattcaaaa tattaacttt 1260 aaccttcctg taacaaatga taatgtattg ctaccaacag atccaattgg gggtaaaaca 1320 ggaattaact atactaatat atttaatact tatggtcctt taactgcatt aaataatgta 1380 ccaccagttt atccaaatgg tcaaatttgg gataaagaat ttgatactga cttaaaacca 1440 agacttcatg taaatgcacc atttgtttgt caaaataatt gtcctggtca attatttgta 1500 aaagttgcgc ctaatttaac gaatgaatat gatcctgatg catctgctaa tatgtcaaga 1560 attgtaactt attcagattt ttggtggaaa ggtaaattag tatttaaagc taaactaaga 1620 gcatctcata cttggaatcc aattcaacaa atgagtatta atgtagataa ccaatttaac 1680 tatgtaccaa ataatattgg agctatgaaa attgtatatg aaaaatctca actagcacct 1740 agaaaattat attaa 1755 // ID AB000069; SV 1; linear; genomic DNA; STD; VRL; 2007 BP. XX AC AB000069; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 3) XX DE Feline panleukopenia virus gene for nonstructural protein 1, complete cds, DE isolate: TU8. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-2007 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "Evolutionary pattarn of felinepanleukopenia virus differs that of canine RT parvovirus"; RL Unpublished. XX DR MD5; de140bd2071a6a13943ebe650c436c8b. XX FH Key Location/Qualifiers FH FT source 1..2007 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="TU8" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..2007 FT /product="nonstructural protein 1" FT /db_xref="GOA:P90449" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR021076" FT /db_xref="InterPro:IPR021972" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:P90449" FT /protein_id="BAA19030.1" FT /translation="MSGNQYTEEVMEGVNWLKKHAENEAFSFVFKCDNVQLNGKDVRWN FT NYTKPIQNEELTSLIRGAQTAMDQTEEEEMDWESEVDSLAKKQVQTFDALIKKCLFEVF FT VSKNIEPNECVWFIQHEWGKDQGWHCHVLLHSKNLQQATGKWLRRQMNMYWSRWLVTLC FT SVNLTPTEKIKLREIAEDSEWVTILTYRHKQTKKDYVKMVHFGNMIAYYFLTKKKIVHM FT TKESGYFLSTDSGWKFNFMKYQDRHTVSTLYTEQMKPETVETTVTTAQETKRGRIQTKK FT EVSIKCTLRDLVSKRVTSPEDWMMLQPDSYIEMMAQPGGENLLKNTLEICTLTLARTKT FT AFELILEKADNTKLTNFDLANSRTCQIFRMHGWNWIKVCHAIACVLNRQGGKRNTVLFH FT GPASTGKSIIAQAIAQAVGNVGCYNAANVNFPFNDCTNKNLIWIEEAGNFGQQVNQFKA FT ICSGQTIRIDQKGKGSKQIEPTPVIMTTNENITIVRIGCEERPEHTQPIRDRMLNIKLV FT CKLPGDFGLVDKEEWPLICAWLVKHGYQSTMANYTHHWGKVPEWDENWAEPKIQEGINS FT PGCKDLETQAASNPQSQDHVLTPLTPDVVDLALEPWSTPDTPIAETANQQSNQLGVTHK FT DVQASPTWSEIEADLRAIFTSEQLEEDFRDDLD" XX SQ Sequence 2007 BP; 767 A; 311 C; 403 G; 526 T; 0 other; atgtctggca accagtatac tgaggaagtt atggagggag taaattggtt aaagaaacat 60 gcagaaaatg aagcattttc gtttgttttt aaatgtgaca acgtccaact aaatggaaag 120 gatgttcgct ggaacaacta taccaaacca attcaaaatg aagagctaac atctttaatt 180 agaggagcac aaacagcaat ggatcaaacc gaagaagaag aaatggactg ggaatcggaa 240 gttgatagtc tcgccaaaaa gcaagtacaa acttttgatg cattaattaa aaaatgtctt 300 tttgaagtct ttgtttctaa aaatatagaa ccaaatgaat gtgtttggtt tattcaacat 360 gaatggggaa aagatcaagg ctggcattgt catgttttac ttcatagtaa gaacttacaa 420 caagcaactg gtaaatggct acgcagacaa atgaatatgt attggagtag atggttggtg 480 actctttgtt cggtaaactt aacaccaact gaaaagatta agctcagaga aattgcagaa 540 gatagtgaat gggtaactat attaacatac agacataagc aaacaaaaaa agactatgtt 600 aaaatggttc attttggaaa tatgatagca tattactttt taacaaagaa aaaaattgtc 660 cacatgacaa aagaaagtgg ctatttttta agtactgatt ctggttggaa atttaacttt 720 atgaagtatc aagacagaca tactgtcagc acactttaca ctgaacaaat gaaaccagaa 780 accgttgaaa ccacagtgac gacagcacag gaaacaaagc gcgggagaat tcaaactaaa 840 aaggaagtgt caatcaaatg tactttgcgg gacttggtta gtaaaagagt aacatcacct 900 gaagactgga tgatgttaca accagatagt tatattgaaa tgatggcaca accaggaggt 960 gaaaatcttt taaaaaatac acttgaaatt tgtactttga ctttagcaag aacaaaaaca 1020 gcatttgaat taatacttga aaaagcagat aatactaaac taactaactt tgatcttgca 1080 aattctagaa catgtcaaat ttttagaatg cacggatgga attggattaa agtttgtcac 1140 gctatagcat gtgttttaaa tagacaaggt ggtaaaagaa atacagttct ttttcatgga 1200 ccagcaagta caggaaaatc tattattgct caagccatag cacaagctgt gggtaatgtt 1260 ggttgttata atgcagcaaa tgtaaatttt ccatttaatg actgtaccaa taaaaattta 1320 atttggattg aagaagctgg taactttggt caacaagtta atcaatttaa agcaatttgt 1380 tctggacaaa caattagaat tgatcaaaaa ggtaaaggaa gtaagcaaat tgaaccaact 1440 ccagtaatta tgacaactaa tgaaaatata acaattgtaa gaattggatg tgaagaaaga 1500 cctgaacata cacaaccaat aagagacaga atgttgaaca ttaaattagt atgtaagctt 1560 ccaggagact ttggtttggt tgataaagaa gaatggcctt taatatgtgc atggttagtt 1620 aaacatggtt atcaatcaac catggctaac tacacacatc attggggaaa agtaccagag 1680 tgggatgaaa actgggcgga gcctaaaata caagaaggta taaattcacc aggttgcaaa 1740 gacttagaga cacaagcggc aagcaatcct cagagtcaag accacgttct aactcctctg 1800 actccggacg tagtggacct tgcactggaa ccgtggagta ctccagatac gcctattgca 1860 gaaactgcaa atcaacaatc aaaccaactt ggcgttactc acaaagacgt gcaagcgagt 1920 ccgacatggt ccgaaataga ggcagacctg agagccattt ttacttctga acaattggaa 1980 gaagattttc gagacgactt ggattaa 2007 // ID AB000070; SV 1; linear; genomic DNA; STD; VRL; 1755 BP. XX AC AB000070; XX DT 12-JAN-1997 (Rel. 50, Created) DT 14-JUL-2009 (Rel. 101, Last updated, Version 4) XX DE Feline panleukopenia virus gene for capsid protein 2, complete cds, DE isolate: TU8. XX KW . XX OS Feline panleukopenia virus OC Viruses; Parvoviridae; Parvovirinae; Protoparvovirus. XX RN [1] RP 1-1755 RA Horiuchi M.; RT ; RL Submitted (22-DEC-1996) to the INSDC. RL Contact:Motohiro Horiuchi Obihiro University of Agriculture and Veterinary RL Medicine, Veterinary Public Health; Inada cho, Obihiro, Hokkaido 080, Japan XX RN [2] RA Horiuchi M.; RT "Evolutionary pattern of feline panleukopenia virus differs from that of RT canine parvovirus"; RL Unpublished. XX DR MD5; 872c41805a2c2e800c300fd5ceb2aabb. DR EuropePMC; PMC3059301; 21366901. XX FH Key Location/Qualifiers FH FT source 1..1755 FT /organism="Feline panleukopenia virus" FT /lab_host="Felis domesticus" FT /isolate="TU8" FT /mol_type="genomic DNA" FT /db_xref="taxon:10786" FT CDS 1..1755 FT /product="capsid protein 2" FT /db_xref="GOA:P89517" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR036952" FT /db_xref="UniProtKB/TrEMBL:P89517" FT /protein_id="BAA19031.1" FT /translation="MSDGAVQPDGGQPAVRNERATGSGNGSGGGGGGGSGGVGISTGTF FT NNQTEFKFLENGWVEITANSSRLVHLNMPESENYKRVVVNNMDKTAVKGNMALDDIHVQ FT IVTPWSLVDANAWGVWFNPGDWQLIVNTMSELHLVSFEQEIFNVVLKTVSESATQPPTK FT VYNNDLTASLMVALDSNNTMPFTPAAMRSETLGFYPWKPTIPTPWRYYFQWDRTLIPSH FT TGTSGTPTNIYHGTDPDDVQFYTIENSVPVHLLRTGDEFATGTFFFDCKPCRLTHTWQT FT NRALGLPPFLNSLPQSEGATNFGDIGVQQDKRRGVTQMGNTDYITEATIMRPAEVGYSA FT PYYSFEASTQGPFKTPIAAGRGGAQTDENQAADGDPRYAFGRQHGQKTTTTGETPERFT FT YIAHQDTGRYPEGDWIQNINFNLPVTNDNVLLPTDPIGGKTGINYTNIFNTYGPLTALN FT NVPPVYPNGQIWDKEFDTDLKPRLHVNAPFVCQNNCPGQLFVKVAPNLTNEYDPDASAN FT MSRIVTYSDFWWKGKLVFKAKLRASHTWNPIQQMSINVDNQFNYVPNNIGAMKIVYEKS FT QLAPRKLY" XX SQ Sequence 1755 BP; 619 A; 270 C; 345 G; 521 T; 0 other; atgagtgatg gagcagttca accagacggt ggtcaacctg ctgtcagaaa tgaaagagct 60 acaggatctg ggaacgggtc tggaggcggg ggtggtggtg gttctggggg tgtggggatt 120 tctacgggta ctttcaataa tcagacggaa tttaaatttt tggaaaacgg gtgggtggaa 180 atcacagcaa actcaagcag acttgtacat ttaaatatgc cagaaagtga aaattataaa 240 agagtagttg taaataatat ggataaaact gcagttaaag gaaacatggc tttagatgat 300 attcatgtac aaattgtaac accttggtca ttggttgatg caaatgcttg gggagtttgg 360 tttaatccag gagattggca actaattgtt aatactatga gtgagttgca tttagttagt 420 tttgaacaag aaatttttaa tgttgtttta aagactgttt cagaatctgc tactcagcca 480 ccaactaaag tttataataa tgatttaact gcatcattga tggttgcatt agatagtaat 540 aatactatgc catttactcc agcagctatg agatctgaga cattgggttt ttatccatgg 600 aaaccaacca taccaactcc atggagatat tattttcaat gggatagaac attaatacca 660 tctcatactg gaactagtgg cacaccaaca aatatatatc atggtacaga tccagatgat 720 gttcaatttt atactattga aaattctgtg ccagtacact tactaagaac aggtgatgaa 780 tttgctacag gaacattttt ttttgattgt aaaccatgta gactaacaca tacatggcaa 840 acaaatagag cattgggctt accaccattt ttaaattctt tgcctcaatc tgaaggagct 900 actaactttg gtgatatagg agttcaacaa gataaaagac gtggtgtaac tcaaatggga 960 aatacagact atattactga agctactatt atgagaccag ctgaggttgg ttatagtgca 1020 ccatattatt cttttgaagc gtctacacaa gggccattta aaacacctat tgcagcagga 1080 cgggggggag cgcaaacaga tgaaaatcaa gcagcagatg gtgatccaag atatgcattt 1140 ggtagacaac atggtcaaaa aactactaca acaggagaaa cacctgagag atttacatat 1200 atagcacatc aagatacagg aagatatcca gaaggagatt ggattcaaaa tattaacttt 1260 aaccttcctg taacaaatga taatgtattg ctaccaacag atccaattgg gggtaaaaca 1320 ggaattaact atactaatat atttaatact tatggtcctt taactgcatt aaataatgta 1380 ccaccagttt atccaaatgg tcaaatttgg gataaagaat ttgatactga cttaaaacca 1440 agacttcatg taaatgcacc atttgtttgt caaaataatt gtcctggtca attatttgta 1500 aaagttgcgc ctaatttaac gaatgaatat gatcctgatg catctgctaa tatgtcaaga 1560 attgtaactt attcagattt ttggtggaaa ggtaaattag tatttaaagc taaactaaga 1620 gcatctcata cttggaatcc aattcaacaa atgagtatta atgtagataa ccaatttaac 1680 tatgtaccaa ataatattgg agctatgaaa attgtatatg aaaaatctca actagcacct 1740 agaaaattat attaa 1755 // ID AB000071; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000071; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: I-3-1c. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; 049804d7d0ccf145efc1928307827879. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="I-3-1c" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:P89547" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:P89547" FT /protein_id="BAA19032.1" FT /translation="VQINCTRPNNNTRKGIHMGPRGAFYTTGEITGDIRQAHCNLSI" XX SQ Sequence 129 BP; 59 A; 20 C; 24 G; 26 T; 0 other; gtacaaatta attgtacaag acccaacaac aatacaagaa aaggtataca tatgggacca 60 agaggagcat tttatacaac aggagagata acaggagata taagacaagc acattgtaac 120 cttagtata 129 // ID AB000072; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000072; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: F-6-1c/DNA. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; 9717d2cc9941a2f9b5c24da818a6eb71. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="F-6-1c/DNA" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:P90237" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:P90237" FT /protein_id="BAA19033.1" FT /translation="VEINCTRPSNNTRKSIHIGPGRAFYATGDIIGDIRQAHCNLSR" XX SQ Sequence 129 BP; 58 A; 19 C; 26 G; 26 T; 0 other; gtagaaatta attgtacaag acccagcaat aatacaagaa aaagcataca tataggacca 60 gggagagcat tttatgcaac aggagacata ataggagata taagacaagc acattgtaac 120 cttagtaga 129 // ID AB000073; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000073; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: F-1-1c/DNA. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; 35eab8dcbfc558601a3ea6e0030313e5. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="F-1-1c/DNA" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:P90395" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:P90395" FT /protein_id="BAA19034.1" FT /translation="VEINCTRPNNNTRKSIHIGPGRAFYATGDIIGDIRQAHCNLSR" XX SQ Sequence 129 BP; 59 A; 19 C; 25 G; 26 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa aaagcataca tataggacca 60 gggagagcat tttatgcaac aggagacata ataggagata taagacaagc acattgtaac 120 cttagtaga 129 // ID AB000074; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000074; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: F-10-1c/DNA. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; 1daefa04dc360b04871bd54791085513. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="F-10-1c/DNA" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:P89548" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:P89548" FT /protein_id="BAA19035.1" FT /translation="VEINCTRPSNNTRKSIHIAPGRAFYATGDIIGNIRQAHCNLSR" XX SQ Sequence 129 BP; 60 A; 19 C; 23 G; 27 T; 0 other; gtagaaatta attgtacaag acccagcaat aatacaagaa aaagtataca tatagcacca 60 ggaagagcat tttatgcaac aggagacata ataggaaata taagacaagc acattgtaac 120 cttagtaga 129 // ID AB000075; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000075; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 9) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: F-2-1c/DNA. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; 8db1d053acaad108ee35a052fc9409d9. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="F-2-1c/DNA" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:P89549" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:P89549" FT /protein_id="BAA19036.1" FT /translation="VEINCTRPNNNTRRSIHIGPGGAFYATGSIIGDIKQAHCNLSR" XX SQ Sequence 129 BP; 58 A; 18 C; 26 G; 27 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa gaagtataca tataggacca 60 gggggagcat tttatgcaac aggaagcata ataggagata taaaacaagc acattgtaac 120 cttagtaga 129 // ID AB000076; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000076; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: F-3-1c/DNA. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; 890cde294e89650c514bf540a56eddda. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="F-3-1c/DNA" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:P89550" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:P89550" FT /protein_id="BAA19037.1" FT /translation="VEINCTRPNNNTRKSIHIAPGRAFHATGDIIGNIRQAHCNLSR" XX SQ Sequence 129 BP; 61 A; 21 C; 22 G; 25 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa aaagcataca tatagcacca 60 ggaagagcat ttcatgcaac aggagacata ataggaaata taagacaagc acattgtaac 120 cttagtaga 129 // ID AB000077; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000077; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: F-4-2c/DNA. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; cb135aa54d127eae9103fbda548a8a43. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="F-4-2c/DNA" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:P89551" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:P89551" FT /protein_id="BAA19038.1" FT /translation="VEINCTRPNNNTRKSIHIAPGRAFYATGDIIGNIRQAHCNLSR" XX SQ Sequence 129 BP; 61 A; 19 C; 22 G; 27 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa aaagtataca tatagcacca 60 ggaagagcat tttatgcaac aggagacata ataggaaata taagacaagc acattgtaac 120 cttagtaga 129 // ID AB000078; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000078; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: F-5-1c/DNA. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; 3b26a0912016b8857203416a7c9468b5. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="F-5-1c/DNA" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:P89552" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:P89552" FT /protein_id="BAA19039.1" FT /translation="VEINCTRPNNNTRKSIHIGPGRAFYATGDIIGNIRHAHCNLSR" XX SQ Sequence 129 BP; 59 A; 18 C; 24 G; 28 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa aaagtataca tataggacca 60 gggagagcat tttatgcaac aggagacata ataggaaata taagacatgc acattgtaac 120 cttagtaga 129 // ID AB000080; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000080; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: F-8-1c/DNA. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; 4bd8c239ea8b4f2ed7a428152ed50e90. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="F-8-1c/DNA" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:P89553" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:P89553" FT /protein_id="BAA19040.1" FT /translation="VEINCTRPNNNTRKSIHIGPGRAFYATGDIMGNIRQAHCNLSR" XX SQ Sequence 129 BP; 59 A; 19 C; 25 G; 26 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa aaagcataca tataggacca 60 gggagagcat tttatgcaac aggagacata atgggaaata taagacaagc acattgtaac 120 cttagtaga 129 // ID AB000081; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000081; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: F-9-1c/DNA. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; 9aef775cb4852363e6487d4e93261ca8. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="F-9-1c/DNA" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:P90238" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:P90238" FT /protein_id="BAA19041.1" FT /translation="VEINCTRPSNNTRKSIHIGPGRAFYATGEIIGDIRQAHCNLSR" XX SQ Sequence 129 BP; 59 A; 19 C; 26 G; 25 T; 0 other; gtagaaatta attgtacaag acccagcaat aatacaagaa aaagcataca tataggacca 60 gggagagcat tttatgcaac aggagaaata ataggagaca taagacaagc acattgtaac 120 cttagtaga 129 // ID AB000082; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000082; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: M'-6-2. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; b5c513c76f9edbaa19f2680e496b812d. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="M'-6-2" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:Q788L5" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788L5" FT /protein_id="BAA19042.1" FT /translation="VEINCTRPNNNTRKSIHIGPGRAFYATGSIIGDIRQAHCNLSR" XX SQ Sequence 129 BP; 58 A; 18 C; 26 G; 27 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa aaagtataca tataggacca 60 gggagagcat tttatgcaac aggaagcata ataggggata taagacaagc acattgtaac 120 cttagtaga 129 // ID AB000083; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000083; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: M'-7-1. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; 4b37c6ac8f122de95d8e64096accc78e. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="M'-7-1" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:P89555" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:P89555" FT /protein_id="BAA19043.1" FT /translation="VEINCTRPNNNTRKSIHIGPGRAFYATGSVIGDIRQAHCNLSR" XX SQ Sequence 129 BP; 58 A; 18 C; 26 G; 27 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa aaagtataca tataggacca 60 gggagagcat tttatgcaac aggaagcgta ataggagata taagacaagc acattgtaac 120 cttagtaga 129 // ID AB000084; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000084; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: M'-8-1. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; bf39ba8fab158fe1de4adf4780b0b5ab. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="M'-8-1" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:P89556" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:P89556" FT /protein_id="BAA19044.1" FT /translation="VEINCSRPNNNTRKSIHIGPGRAFYATGSVIGDIRQAHCNLSR" XX SQ Sequence 129 BP; 57 A; 18 C; 26 G; 28 T; 0 other; gtagaaatta attgttcaag acccaacaat aatacaagaa aaagtataca tataggacca 60 gggagagcat tttatgcaac aggaagcgta ataggagata taagacaagc acattgtaac 120 cttagtaga 129 // ID AB000085; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000085; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: M-1-3-DNA. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; b5c513c76f9edbaa19f2680e496b812d. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="M-1-3-DNA" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:Q788L4" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788L4" FT /protein_id="BAA19045.1" FT /translation="VEINCTRPNNNTRKSIHIGPGRAFYATGSIIGDIRQAHCNLSR" XX SQ Sequence 129 BP; 58 A; 18 C; 26 G; 27 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa aaagtataca tataggacca 60 gggagagcat tttatgcaac aggaagcata ataggggata taagacaagc acattgtaac 120 cttagtaga 129 // ID AB000086; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000086; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: M-2-2-DNA. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; 5aa9e59662187ff6331181fdfabd6757. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="M-2-2-DNA" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:Q788L3" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788L3" FT /protein_id="BAA19046.1" FT /translation="VEINCTRPNNNTRKSIHIGPGRAFYATGSIIGDIRQAHCNLSR" XX SQ Sequence 129 BP; 59 A; 19 C; 25 G; 26 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa aaagtataca tataggacca 60 gggagagcat tttacgcaac aggaagcata ataggagata taagacaagc acattgtaac 120 cttagtaga 129 // ID AB000087; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000087; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: M-3-1-DNA. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; 6515a16c49c3a4c9021e5df7959496b5. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="M-3-1-DNA" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:Q788L2" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788L2" FT /protein_id="BAA19047.1" FT /translation="VEINCTRPNNNTRKSIHIGPGRAFYATGSIIGDIRQAHCNLSR" XX SQ Sequence 129 BP; 58 A; 19 C; 25 G; 27 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa aaagtataca tataggacca 60 gggagagcat tttatgcaac aggaagcata ataggagata taagacaagc ccattgtaac 120 cttagtaga 129 // ID AB000088; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000088; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: M-4-1-DNA. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; 13df96b58490fdb5373455e21bfe7480. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="M-4-1-DNA" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:Q788L1" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788L1" FT /protein_id="BAA19048.1" FT /translation="VEINCTRPNNNTRKSIHIGPGRAFYATGSVIGDIRQAHCNLSR" XX SQ Sequence 129 BP; 58 A; 19 C; 26 G; 26 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa aaagtataca tataggacca 60 gggagagcat tctatgcaac aggaagcgta ataggagata taagacaagc acattgtaac 120 cttagtaga 129 // ID AB000089; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000089; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: M-5-1-DNA. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; 4b37c6ac8f122de95d8e64096accc78e. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="M-5-1-DNA" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:Q788L0" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788L0" FT /protein_id="BAA19049.1" FT /translation="VEINCTRPNNNTRKSIHIGPGRAFYATGSVIGDIRQAHCNLSR" XX SQ Sequence 129 BP; 58 A; 18 C; 26 G; 27 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa aaagtataca tataggacca 60 gggagagcat tttatgcaac aggaagcgta ataggagata taagacaagc acattgtaac 120 cttagtaga 129 // ID AB000090; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000090; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: M-6-1-DNA. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; 48a8d27e0b01814ebeda3647d2ed6633. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="M-6-1-DNA" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:P89562" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:P89562" FT /protein_id="BAA19050.1" FT /translation="VEINCTRPNNNTRKSIHIGPGRAFYATGSIIGNIRQAHCNLSR" XX SQ Sequence 129 BP; 60 A; 18 C; 24 G; 27 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa aaagtataca tataggacca 60 gggagagcat tttatgcaac aggaagcata ataggaaata taagacaagc acattgtaac 120 cttagtaga 129 // ID AB000091; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000091; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 9) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: M-7-1-DNA. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; a9b08a1d37767092fa650f4ffd0bb981. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="M-7-1-DNA" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:P89563" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:P89563" FT /protein_id="BAA19051.1" FT /translation="VEINCTRPNNNTRKSIHIGPGRAFYTTGSIIGDIRQAHCNLSR" XX SQ Sequence 129 BP; 60 A; 19 C; 24 G; 26 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa aaagtataca tataggacca 60 gggagagcat tttacacaac aggaagcata ataggagata taagacaagc acattgtaac 120 cttagtaga 129 // ID AB000092; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000092; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: M-8-1-DNA. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; 40e754bf3f0ff2e472495e48a28b6bf8. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="M-8-1-DNA" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:P89564" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:P89564" FT /protein_id="BAA19052.1" FT /translation="VEINCTRPNNNTRKSIHIGPGRAFYATGGIIGDIRQAHCNLSR" XX SQ Sequence 129 BP; 58 A; 18 C; 26 G; 27 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa aaagtataca tataggacca 60 gggagagcat tttatgcaac aggaggcata ataggagata taagacaagc acattgtaac 120 cttagtaga 129 // ID AB000137; SV 1; linear; genomic RNA; STD; VRL; 335 BP. XX AC AB000137; XX DT 14-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: BCG1HC. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-335 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; c49fff114e9ac60e39bdaa306b173802. XX FH Key Location/Qualifiers FH FT source 1..335 FT /organism="GB virus C" FT /isolate="BCG1HC" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..266 FT CDS 267..>335 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10480" FT /protein_id="BAA19803.1" FT /translation="MAVLLLLLVVEAGAILAPATHAC" XX SQ Sequence 335 BP; 55 A; 106 C; 105 G; 68 T; 1 other; ttaaaccgag cccactaccc acctgggcaa acaacgccca cgtacggtcc acgtcgccct 60 acaatgtctc tcttgaccaa taggctttgc cggcgagttg acaaggacca gtgggggctg 120 ggcggcaggg gaaggacccc tgtcgctgcc cttcccggtg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaag arccttcggg tgagggcggg 240 tggcattttt ccttcctata ccgatcatgg cagtccttct gcttcttctg gttgtggagg 300 ccggggccat cttggccccg gccacacatg cttgt 335 // ID AB000138; SV 1; linear; genomic RNA; STD; VRL; 1952 BP. XX AC AB000138; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: BG1HC. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-1952 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; c2a8d75285a522f95e9aa27909649936. XX FH Key Location/Qualifiers FH FT source 1..1952 FT /organism="GB virus C" FT /isolate="BG1HC" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..266 FT CDS 267..>1952 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="InterPro:IPR024347" FT /db_xref="UniProtKB/TrEMBL:O10697" FT /protein_id="BAA19804.1" FT /translation="MAVLLLLLVVEAGAILAPATHACKXNGQYFLTNCCAPKDIGFCLE FT GGCLVALGCTVCTDRCWPLYQAGLAVRPGKSAAQLVGELGSLYGPLSVSAYVAGILGLG FT EVYSGVLTVGVALTRRVYPVPNLTCAVECELKWESEFWRWTEQLASNYWILEYLWKVPF FT DFWRGVMSLTPLLVCVAALLLLEQRIVMVFLLVTMAGMSQGAPAAVLGSRPFEPGLTWQ FT SCSCXANGSRVITGERVWDRGNVTLLCDCPNGPWVWLPAVCQAIGWGDPITHWSHGQNQ FT WPLSCPQYVYGAVSVTCVWGSVSWFASTGGRDSKIDVWSLVPVGSASCTIAALGSSDRD FT TVVELSEWGIPCATCILDRRPASCGTCVRDCWPETGSVRFPFHRCGAGPRLTKDLEAVP FT FVNRTTPFAIRGPLGNQGRGNPVRSPLGFGSYTMTKIRDSLHLVKCPTPAIEPPTGTFG FT FFPGTPPLNNCMLLGTEVSEVLGGAGLTGGFYEPLVRRCSELAGRRNPVCPGFAWLSSG FT RPDGFIHVQGHLQEVDAGNFIPPPRWLLLDFVFVLLYLMKLAEAR" XX SQ Sequence 1952 BP; 315 A; 545 C; 632 G; 454 T; 6 other; ttaaaccgag cccattaccc acctgggcaa acaacgccca cgtacggtcc acgtcgccct 60 acaatgtctc tcttgaccaa taggctttgc cggcgagttg acaaggacca gtgggggctg 120 ggcggcgggg gaaggacctc cgtcgctgcc cttcccggtg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaan anccttcggg tgagggcggg 240 tggcattttt ctttcctata ccgatcatgg cagtccttct gcttcttctc gtggtggagg 300 ccggggccat cttggccccg gccacacacg cttgtaaarc aaatgggcaa tatttcctca 360 caaattgttg cgccccaaag gacattgggt tctgcctcga aggcggatgc cttgtggccc 420 tgggctgcac agtttgtacc gaccgctgct ggccactgta tcaggcggga ctggccgtgc 480 ggcctggcaa gtccgcggcc cagctggtgg gggagctcgg tagcctttac gggcccttgt 540 cggtgtcagc ctatgtggcg ggcatcctag ggctcgggga ggtgtactcg ggcgtcctca 600 ctgttggtgt tgcgttgacg cggcgggtct acccggtccc aaatctgact tgtgcagtag 660 aatgtgagtt gaagtgggaa agtgagtttt ggagatggac tgagcagttg gcctccaatt 720 actggattct ggaatacctc tggaaagtgc ctttcgactt ctggcgggga gtaatgagcc 780 tgacacccct gttggtgtgc gtcgcggccc ttctcctgct cgagcaaagg attgtcatgg 840 tcttcctgct tgtgaccatg gcggggatgt cgcaaggcgc ccccgctgcg gtcttagggt 900 caaggccctt tgagccggga ttgacgtggc agtcgtgctc gtgtarggcg aatgggtcgc 960 gcgtgatcac aggggaragg gtttgggacc gagggaatgt cacacttttg tgtgattgcc 1020 ccaacggtcc ctgggtatgg ctgccagccg tttgccaagc aatcggttgg ggcgacccta 1080 ttactcattg gagccacgga caaaatcagt ggcccctctc ctgcccccag tatgtctatg 1140 gcgctgtttc agtgacctgc gtgtggggtt ccgtgtcttg gtttgcctcc actgggggtc 1200 gtgactcgaa gatcgatgtg tggagcttgg tcccagttgg ctcagccagc tgcaccatag 1260 ccgcactcgg gtcatcggat cgcgataccg tcgtggagct ctccgagtgg gggattccct 1320 gcgctacctg cattctggat cgtcggcctg cctcgtgcgg cacctgtgtg agggactgct 1380 ggcccgaaac agggtcggta cgtttcccgt tccatcggtg cggtgcgggg cctaggctga 1440 caaaggactt ggaagctgtg cccttcgtca acaggacaac tcccttcgcc ataaggggcc 1500 ccctgggcaa ccaggggaga ggcaacccgg tgcggtcgcc cttgggtttt gggtcctaca 1560 ccatgaccaa gatccgagac tccttacatc tggtgaaatg tcccacccca gccattgagc 1620 ctcccaccgg gacgtttggg ttcttccccg ggactccccc gcttaacaac tgcatgctcc 1680 trggcactga agtgtctgag gtgctgggcg gcgcggggct cacggggggg ttctatgaac 1740 ccctggtgcg gcggtgttca gagctagctg ggaggcgaaa tccggtctgc cctgggtttg 1800 catggctgtc ctcgggtagg cctgatgggt ttatacatgt ccagggtcac ctgcaggagg 1860 tggatgcggg caacttcata ccgccccctc gctggttgct gttggatttt gtatttgtcc 1920 tactctatct gatgaagctg gctgaggcca gg 1952 // ID AB000139; SV 1; linear; genomic RNA; STD; VRL; 1952 BP. XX AC AB000139; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: CG01BD. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-1952 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; 7b97843bf64b24958f31ed46626bfb9a. XX FH Key Location/Qualifiers FH FT source 1..1952 FT /organism="GB virus C" FT /isolate="CG01BD" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..266 FT CDS 267..>1952 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="InterPro:IPR024347" FT /db_xref="UniProtKB/TrEMBL:O10698" FT /protein_id="BAA19805.1" FT /translation="MAVLLLLLVVEAGAILAPATHACRANGQYFLTNCCAPEDIGFCLE FT GGCLVALGCTVCTDRCWPLYQAGLAVRPGKSAAQLVGELGSLYGPLSVSAYVAGILGLG FT EVYSGVLTVGVALTRRVYPVPNLTCAVECELKWESEFWRWTEQLASNYWILEYLWKVPF FT DFWRGVMSLTPLLVCVAALLLLEQRIVMVFLLVTMAGMSQGAPASVMGSRPFDFGLTWQ FT TCSCRANGSRVPTGEKVWDRGNVTLLCDCPNGPWVWLPAFCQAVGWGDPITHWSHGQNR FT WPLSCPQYVYGSVSVTCVWGSASWFATTRGRDSKIDVWSLVPVGSATCTVAALGSSDRD FT TVVELSEWGVPCVTCILDRRPASCGTCVRDCWPETGSVRFPFHRCGTGPRLTKDLEAVP FT FVNRTTPFTIRGPLGNQGXXNPVRSPLGFGSYTMTKIRDTLHLVKCPTPAIEPPTGTFG FT FFPGTPPLNNCMLLGTEVSEVLGGAGLTGGFYEPLVRRCSELMGRRNPVCPGYAWLSSG FT RPDGFIHVQGHLQEVDAGNFIPPPRWLLLDFVFVLLYLMKLAEAR" XX SQ Sequence 1952 BP; 310 A; 547 C; 625 G; 468 T; 2 other; ttaaaccgag cccgttaccc acctgggcaa acgacgccca cgtacggtcc acgtcgccct 60 tcaatgcctc tcttggccaa taggtttatc cggcgagttg acaaggacca gtgggggccg 120 gggccttgga gatggactcc aagtcctgcc cttcccggtg ggccgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaag aatccttcgg gtgagggcgg 240 gtggcatttc tcttttctat accatcatgg cagtccttct gctccttctc gtggttgagg 300 ccggggccat tctggccccg gccacccacg cttgtcgagc gaacgggcaa tatttcctca 360 caaattgctg cgcccctgag gacattgggt tctgcctcga aggtggatgc ctggtggccc 420 ttgggtgcac cgtttgtact gaccgatgct ggccactgta tcaggcgggt ttggctgtgc 480 ggcctggcaa gtccgcggcc caactggtgg gggagctggg tagcctatac gggcccttgt 540 cggtttcagc ctacgtggct gggatcctgg gtctgggcga ggtttactcg ggtgtcctaa 600 cggtgggagt cgcgttgacg cgtcgggtct acccggtgcc caacctgacg tgtgcagttg 660 aatgtgagct taagtgggaa agtgagtttt ggagatggac tgagcagctg gcctccaact 720 actggatttt ggaatatctc tggaaggtcc cttttgactt ttggaggggt gtgatgagcc 780 tgacccccct gctggtttgc gtggccgcgt tgctgctgct cgagcaacgg attgtcatgg 840 tcttcctgtt ggtgacaatg gctgggatgt cgcaaggcgc tccagcctct gtcatggggt 900 ctcgcccctt tgacttcggg ttgacttggc agacctgctc gtgcagggct aacggttcgc 960 gtgttccgac tggggaaaag gtctgggacc gtgggaacgt cacgcttttg tgtgattgcc 1020 ccaacggccc ctgggtttgg ctaccggcct tctgccaagc agtgggctgg ggcgacccta 1080 tcacccattg gagccacgga caaaatcggt ggcccctctc atgcccccaa tatgtctatg 1140 ggtctgtttc agtcacttgc gtgtggggct ccgcatcttg gtttgccacc actcgtggtc 1200 gggattcgaa gatcgatgtg tggagtttgg tgccagttgg ttctgccacc tgtaccgtag 1260 ccgcactcgg ttcatcggac cgcgacacag tggttgagct ctccgagtgg ggggtgccat 1320 gcgtgacgtg cattctggat cgtcggccgg cctcctgtgg cacctgtgtg agggactgct 1380 ggcccgagac cgggtcggtt aggtttccat tccatcggtg cggcacgggg cctcggctga 1440 caaaggactt ggaagctgtg cccttcgtca ataggacaac tcccttcacc ataagggggc 1500 ccctgggaaa ccaggggcna ngcaacccgg tgcggtcgcc cttgggtttt gggtcctaca 1560 ccatgaccaa gatccgagac accctacatt tggtgaaatg tcccacacca gccattgagc 1620 ctcccaccgg gacgtttggg ttcttccccg ggacgccgcc cctcaacaac tgcatgctct 1680 tgggcacgga agtgtccgaa gtgctcggtg gggctggcct cacggggggg ttctatgaac 1740 ccctggtgcg taggtgttcg gagctgatgg gacgccgaaa tccggtctgc ccggggtatg 1800 catggctttc ctcgggtcgg cctgatgggt ttatacatgt tcagggtcac ctgcaggaag 1860 tagatgctgg caacttcatc cctccgccac gctggttgct cttggacttt gtatttgtcc 1920 tgttatacct gatgaagctg gcagaagcac gg 1952 // ID AB000140; SV 1; linear; genomic RNA; STD; VRL; 335 BP. XX AC AB000140; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: CG02BD. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-335 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; ed56cf75fadedd24c772e487d75cc4d1. XX FH Key Location/Qualifiers FH FT source 1..335 FT /organism="GB virus C" FT /isolate="CG02BD" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..266 FT CDS 267..>335 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10699" FT /protein_id="BAA19806.1" FT /translation="MAVLLLLLVVEAGAILAPATHAC" XX SQ Sequence 335 BP; 56 A; 107 C; 105 G; 64 T; 3 other; ttaaaccgag gccgttaccc ctctgggcaa acgacgccca cgtacggtcc acgtcgccct 60 tcaatgtctc tcttgaccaa taggcttagc cggcgagttg acaaggacca gtgggggccg 120 ggcgggyggg ggaaggaccc cccctgctgc ccttcccgag ggggcggaaa atgcatgggg 180 ccacccagct ccgcggcggc ctacagccgg ggtagcccaa aaaccttcgg gtrarggcgg 240 gtggcatttc ttttcctata ccgatcatgg cagtccttct gctcttgctc gtggtggagg 300 ccggggccat tctggccccg gccacacatg cttgt 335 // ID AB000141; SV 1; linear; genomic RNA; STD; VRL; 334 BP. XX AC AB000141; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: CG03BD. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-334 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; 29754e14df7acd91f6148f471adf9f6f. XX FH Key Location/Qualifiers FH FT source 1..334 FT /organism="GB virus C" FT /isolate="CG03BD" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..265 FT CDS 266..>334 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10700" FT /protein_id="BAA19807.1" FT /translation="MAVLLLFLFVEAGAILAPATHAC" XX SQ Sequence 334 BP; 57 A; 104 C; 103 G; 68 T; 2 other; ttaaaccgag cccattaccc acctgggcaa acaacgccca cgtacggtcc acgtcgccct 60 acaatgtctc tcttgaccaa taggcaatgc cggcgagttg acaaggacca gtgggggctg 120 ggcggcgggg gaaggacccc cgtcgctgcc cttcccggtg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaar aaccttcggg tgarggcggg 240 tggcatttct ttttctatac cgatcatggc agtcctcctg cttttcttgt ttgtggaggc 300 cggggccatt ctggccccgg ccacacatgc ttgt 334 // ID AB000142; SV 1; linear; genomic RNA; STD; VRL; 334 BP. XX AC AB000142; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: CG04BD. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-334 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; 2aa8fde21b470ddaf5046cfa51206733. XX FH Key Location/Qualifiers FH FT source 1..334 FT /organism="GB virus C" FT /isolate="CG04BD" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..265 FT CDS 266..>334 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10701" FT /protein_id="BAA19808.1" FT /translation="MAVLLLLLVVEAGAILAPATHAC" XX SQ Sequence 334 BP; 52 A; 106 C; 106 G; 68 T; 2 other; ttaaaccgag cccacttacc acccgggcaa acgacgccca ygtacggtcc acgtcgccct 60 tcaatgtctc tcttgaccaa taggctttgc cggcgagttg acaaggacca gtgggggccg 120 ggtggcgggg gagggacccc cgtcactgcc cttcccggtg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaar aaccttcggg tgagggcggg 240 tggcattttt cttcctgtac cgatcatggc agtccttctg cttcttcttg ttgtggaggc 300 cggggccatt ctggccccgg ccacacatgc ttgc 334 // ID AB000143; SV 1; linear; genomic RNA; STD; VRL; 334 BP. XX AC AB000143; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: CG06BD. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-334 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; 5dbd83f1f788ad103b401a2e2df1bbc3. XX FH Key Location/Qualifiers FH FT source 1..334 FT /organism="GB virus C" FT /isolate="CG06BD" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..265 FT CDS 266..>334 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10702" FT /protein_id="BAA19809.1" FT /translation="MAVLLLLLVVEAGAILAPATHAC" XX SQ Sequence 334 BP; 52 A; 107 C; 106 G; 67 T; 2 other; ttaaaccgag cccattaccc acctgggcaa acaacgccca cgtacggccc acgtcgccct 60 tcaatgtctc tcttgaccaa taggctttgc cggcgagttg acaagggcca gtgggggctg 120 ggcggcaggg gaaggacctc tgtcgctgcc cttcccggtg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaar aaccttcggg tgagggcggg 240 tggcatttct tyttcttgac cgatcatggc agtccttctg cttctcctcg ttgtggaggc 300 cggggccatt ctggccccgg ccacgcacgc ttgc 334 // ID AB000144; SV 1; linear; genomic RNA; STD; VRL; 1951 BP. XX AC AB000144; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: CG07BD. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-1951 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; 762b5f2c02903d4ced205ff5330af011. XX FH Key Location/Qualifiers FH FT source 1..1951 FT /organism="GB virus C" FT /isolate="CG07BD" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..265 FT CDS 266..>1951 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="InterPro:IPR024347" FT /db_xref="UniProtKB/TrEMBL:O10703" FT /protein_id="BAA19810.1" FT /translation="MAVLLLLLVVEAGAILAPATHACGANGQYFLTNCCALEDIGFCLE FT GGCLVALGCTICTDRCWPLYQAGLAVRPGKSAAQLVGELGSLYGPLSVSAYVAGILGLG FT EVYSGVLTVGVALTRRVYPVPNLTCAVECELKWESEFWRWTEQLASNYWILEYLWKVPF FT DFWRGVMSLTPLLVCVAALLLLEQRIVMVFLLVTMAGMSQGAPASVLGSRPFEPGLTWQ FT SCSCKANGSRIPTGERVWDRGNVTLLCDCPNGPWVWLPAVCQAIGWGDPITHWSHGQNQ FT WPLSCPQYVYGAVSVTCVWGSVSWFASTGGRDSKIDVWSLVPVGSASCTIAALGSSDRD FT TVVELSEWGIPCATCILDRRPASCGTCVRDCWPETGSVRFPFHRCGAGPRLTKDLDAVP FT FVNRTTPFTIRGPLGNQGXXNPVRSPLGFGSYTMTKXRDSLHLVKCPTPAIEPPTGTFG FT FFPGXPPLNNCMLLGTEVSEVLGGAGLTGGFYEPLVRRCSELAGKRNPVCPGFAWLSSG FT RPDGFIHVQGHLQEVDAGNFIPPPRWLLLDFVFVLLYLMKLAEAR" XX SQ Sequence 1951 BP; 308 A; 547 C; 623 G; 464 T; 9 other; ttaaaccgag cccattaccc acctgggcaa acaacgccca cgtacggtcc acgtcgccct 60 tcaatgtctc tcttgaccaa taggctaagc cggcgagttg acaaggacca gtgggggctg 120 ggcggcaggg gaaggaccct tgtcgctgcc cttcccggtg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaan anccttcggg tgagggcggg 240 tggcattttc ttttctttac cgatcatggc agtccttctg cttctcctcg ttgtggaggc 300 cggggccatt ctggccccgg ccacgcacgc ttgcggagca aatgggcaat atttcctcac 360 aaattgttgc gccttggagg acatagggtt ctgcctcgag ggcggatgcc ttgtggcctt 420 gggatgcaca atttgtactg accgctgctg gccactgtat caggcggggt tagccgtgcg 480 gcctggcaag tccgccgctc agttggttgg ggaactcggg agcctttacg ggcctttgtc 540 tgtgtcggcc tatgtggccg gcatactagg gcttggggag gtctactcgg gggtccttac 600 cgtcggagtg gcgttgacgc gccgggtcta cccggtccca aatctgacct gtgcagtaga 660 atgtgagctg aagtgggaaa gtgagttttg gagatggact gagcagttgg cctccaatta 720 ctggatactg gaatatctct ggaaggtgcc ttttgacttc tggcgcggag tgatgagcct 780 gacacccctg ttggtgtgtg ttgcggccct tctcctgctt gagcaaagga ttgtcatggt 840 ctttctgctg gtgaccatgg cggggatgtc gcaaggcgcc cccgcctcgg tactggggtc 900 acgccccttt gaacccggat tgacttggca gtcgtgttcc tgcaaggcga atggatcgcg 960 catacccacg ggggagcggg tttgggaccg agggaacgtc acacttctgt gtgactgccc 1020 caacggtccc tgggtctggc tacctgccgt ttgccaagca atcggctggg gcgatcctat 1080 cacccactgg agccacggac aaaatcagtg gcccctctcg tgcccccagt acgtctatgg 1140 tgctgtttca gtgacttgcg tgtggggttc cgtatcttgg tttgcttcca cgggcgggcg 1200 tgattcgaag atcgatgtgt ggagtttggt tccggttggc tctgccagct gcaccatagc 1260 cgctctcggt tcctcggacc gtgacaccgt ggttgagctc tctgagtggg ggattccttg 1320 cgctacctgc atcctggacc gtcggcccgc ctcgtgcggc acctgtgtgc gggactgctg 1380 gcccgagacc gggtcagtgc ggtttccttt ccatcggtgc ggtgcggggc cgcggctgac 1440 aaaagacttg gacgctgtgc ccttcgtcaa caggacaact cccttcacca taaggggccc 1500 cctgggcaac caggggnnnn ncaacccggt gcggtcgccc ttgggttttg ggtcctacac 1560 catgaccaag ntccgagact ccttacatct ggtgaaatgt cccacccctg ccattgagcc 1620 tcccactggg acgtttgggt tctttcccgg gnctcccccg cttaacaact gcatgctctt 1680 aggcaccgag gtgtctgaag tgctgggcgg cgcggggctc acgggggggt tctatgaacc 1740 cctggtgcgg cggtgttcag agttagctgg gaagcgaaat ccggtttgtc cggggttcgc 1800 gtggctatcc tcgggcaggc cagatgggtt tatacatgtt cagggccact tgcaggaagt 1860 ggatgcaggc aacttcatcc cacctccccg ctggttgctg ttggactttg tatttgtcct 1920 actctatctg atgaagctgg ctgaggctag g 1951 // ID AB000145; SV 1; linear; genomic RNA; STD; VRL; 334 BP. XX AC AB000145; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: CG08BD. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-334 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; fd170253de1c9edb8cdc212e70472747. XX FH Key Location/Qualifiers FH FT source 1..334 FT /organism="GB virus C" FT /isolate="CG08BD" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..265 FT CDS 266..>334 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10704" FT /protein_id="BAA19811.1" FT /translation="MAVLLLLLVVEAGAILAPATHAC" XX SQ Sequence 334 BP; 52 A; 108 C; 105 G; 67 T; 2 other; ttaaaccgag cccattaccc acctgggcaa acgacgccca cgtacggccc acgtcgccct 60 tcaatgtctc tcttgaccaa taggctttgc cggcgagttg acaagggcca gtgggggccg 120 ggcggcaggg gaaggacccc tgtcgctgcc cttcccggtg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaar arccttcggg tgagggcggg 240 tggcattttc tcttcttaac cgatcatggc agtccttctg cttcttctcg ttgtggaggc 300 cggggccatt ctggccccgg ccacacacgc ttgt 334 // ID AB000146; SV 1; linear; genomic RNA; STD; VRL; 334 BP. XX AC AB000146; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: CG09BD. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-334 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; bf45ce3f41444cee82c10ed9fedd4e54. XX FH Key Location/Qualifiers FH FT source 1..334 FT /organism="GB virus C" FT /isolate="CG09BD" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..265 FT CDS 266..>334 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10705" FT /protein_id="BAA19812.1" FT /translation="MAVLLLLFVVEAGAILAPATHAC" XX SQ Sequence 334 BP; 56 A; 107 C; 105 G; 66 T; 0 other; ttaaaccgag cccactaacc acctgggcaa acaacgccca cgtacggccc acgtcgccct 60 tcaatgtctc tcttgaccaa taggcttagc cggcgagttg acaagggcca gtgggggctg 120 ggcggcgggg gaaggacccc cgtcgctgcc cttcccggtg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaaa aaccttcggg tgaaggcggg 240 tggcatttct ttttctatac cgatcatggc agtccttctg cttctcttcg ttgtggaggc 300 cggggccatt ctggccccgg ccacgcacgc ttgt 334 // ID AB000147; SV 1; linear; genomic RNA; STD; VRL; 334 BP. XX AC AB000147; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: CG10BD. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-334 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; d0d8006f4a6d9e9fbfe0f08b87b25caf. XX FH Key Location/Qualifiers FH FT source 1..334 FT /organism="GB virus C" FT /isolate="CG10BD" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..265 FT CDS 266..>334 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10706" FT /protein_id="BAA19813.1" FT /translation="MAVLLLLLVVEAGAILAPATHAC" XX SQ Sequence 334 BP; 53 A; 109 C; 104 G; 66 T; 2 other; ttaaaccgag cccattaccc acctgggcaa acaacgccca cgtacggccc acgtcgccct 60 tcaatgtctc tcttgaccaa taggcttagc cggcgagttg acaagggcca gtgggggctg 120 ggcggcaggg gaaggacccc tgtcgctgcc cttcccggtg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaar arccttcggg tgagggcggg 240 tggcattttt cttccttaac cgatcatggc agtccttctg cttcttctcg tcgtggaggc 300 cggggccatc ctggccccgg ccacccatgc ttgt 334 // ID AB000148; SV 1; linear; genomic RNA; STD; VRL; 334 BP. XX AC AB000148; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: CG11CH. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-334 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; 48cf433302b75c097b8756364deae5f5. XX FH Key Location/Qualifiers FH FT source 1..334 FT /organism="GB virus C" FT /isolate="CG11CH" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..265 FT CDS 266..>334 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10707" FT /protein_id="BAA19814.1" FT /translation="MAVLLLLLVVEAGAILAPATHAC" XX SQ Sequence 334 BP; 53 A; 108 C; 103 G; 68 T; 2 other; ttaaaccgag cccattaccc acctgggcaa acaacgccca cgtacggccc acgtcgccct 60 tcaatgtctc tcttgaccaa taggcttagc cggcgagttg acaagggcca gtgggggctg 120 ggcggcaggg gaaggacccc tgtcgctgcc cttcccggtg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaar arccttcggg tgagggcggg 240 tggcattttc ttttccttac caatcatggc agtccttctg cttcttctcg ttgtggaggc 300 cggggccatc ttggccccgg ccacccacgc ttgt 334 // ID AB000149; SV 1; linear; genomic RNA; STD; VRL; 335 BP. XX AC AB000149; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: CG14LC. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-335 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; 20eb98b06bffabe6069524c5cf3c48df. XX FH Key Location/Qualifiers FH FT source 1..335 FT /organism="GB virus C" FT /isolate="CG14LC" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..266 FT CDS 267..>335 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10708" FT /protein_id="BAA19815.1" FT /translation="MAVLLLLFVVEAGAILAPATHAC" XX SQ Sequence 335 BP; 55 A; 107 C; 103 G; 68 T; 2 other; ttaaacctag cccactactc acctgggcaa acgacgccca cgtacggtcc acgtcgccct 60 ttcaatgtct ctcttgacca ataggcaaag ccggcgagtt gacaaggacc agtgggggcc 120 gggcgcgggg gaaggacccc tggcgctgcc cttcccggtg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaaa aacccttcgg gtrarggcgg 240 gtggcatttc tttttcctta ccgatcatgg cagtccttct gcttctcttc gttgtggagg 300 ccggggccat tttggccccg gccacgcacg cttgt 335 // ID AB000150; SV 1; linear; genomic RNA; STD; VRL; 1952 BP. XX AC AB000150; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: CG15LC. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-1952 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; bfe411c05d5de833bb74e6fd35d47086. XX FH Key Location/Qualifiers FH FT source 1..1952 FT /organism="GB virus C" FT /isolate="CG15LC" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..266 FT CDS 267..>1952 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="InterPro:IPR024347" FT /db_xref="UniProtKB/TrEMBL:O10709" FT /protein_id="BAA19816.1" FT /translation="MAVLLLLLVVEAGAILAPATHACKTNGQYFLTNCCALKDIGFCLE FT GGCLVALGCTVCTDRCWPLYQAGLAVRPGKSAAQLVGELGSLYGPLSVSAYVAGILGLG FT EVYSGVLTVGVALTRRVYPVPNLTCSVECELKWESEFWRWTEQLASNYWILEYLWKVPF FT DFWRGVMSLTPLLVCVAALLLLEQRIVMVFLLVTMAGMSQGAPASVLGSRPFEPGSTWQ FT SCSCRSNGSRIPTGERVWDRGNVSLLCDCPNGPWVWLPAVCQAIGWGDPITHWSHGQHQ FT WPLSCPQYVYGAVSVTCVWGSVSWFASTKGRDSKIDVWSLVPVGSASCTIAALGTSDRD FT TVVELSEWGIPCATCILDRRPASCGTCVRDCWPETGSVRFPFHRCGAGLRLTRDLEAVP FT FVNRTTPFTIRGPLGNQGRGNPVRSPLGFGSYAMTKIRDSLHLVKCPTPAIEPPTGTFG FT FFPGTPPLNNCMLLGTEVSEVLGGAGLTGGFYEPLVRRCSELAGKRNPVCPGFAWLSSG FT RPDGFIHVQGHLQEVDAGNFIPPPRWLLLDFVFVLLYLMKLAEAR" XX SQ Sequence 1952 BP; 315 A; 554 C; 616 G; 465 T; 2 other; ttaaaccgag cccattaccc acctgggcaa acaacgccca cgtacggtcc acgtcgccct 60 acaatgtctc tcttgaccaa taggctttgc cggcgagttg acaaggacca gtgggggctg 120 ggcggtaggg gaaggacccc tgccgctgcc cttcccggtg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaar aaccttcggg tgagggcggg 240 tggcatttcc tctttctgta ccgatcatgg cagtccttct gcttcttctc gttgtggagg 300 ccggggccat cctggccccg gccacccacg cttgtaaaac gaatgggcaa tatttcctca 360 caaactgttg tgccttaaag gacatagggt tctgcctcga gggtggatgc cttgtggcct 420 tgggctgcac tgtttgtact gaccgctgct ggccactgta tcaggcggga ttggctgtgc 480 gaccaggcaa gtccgccgcc cagttggttg gggagctcgg tagtctctat gggcccctgt 540 cggtgtccgc ctacgtggct ggcatcttgg ggctcggcga ggtctattcg ggtgtcctca 600 ccgtcggggt ggcgttgacg cgtcgagtct acccggtccc aaacttgacc tgttcagtag 660 aatgtgagct aaagtgggaa agtgagtttt ggagatggac tgagcagttg gcctccaatt 720 actggatttt ggaatacctc tggaaggtgc ctttcgactt ctggcgcggg gtgatgagcc 780 taacgcccct gctggtgtgt gtcgcggccc tcctcctgct ggagcaaagg attgtcatgg 840 ttttcctgct cgtgaccatg gcggggatgt cgcaaggcgc ccccgcctcg gtcttggggt 900 cacgcccctt cgagccgggt tcaacatggc agtcctgctc ttgcaggtcg aacggatcgc 960 gcatacccac gggggaacgg gtttgggacc gagggaacgt ctcactyctg tgtgactgcc 1020 ccaatggtcc ctgggtctgg ctgccagccg tttgccaagc aatcggctgg ggtgacccta 1080 tcacccattg gagccacgga caacatcagt ggcccctctc ttgtccccag tatgtctatg 1140 gtgccgtttc agtgacctgc gtatggggtt ctgtgtcttg gtttgcctcc actaagggtc 1200 gcgattccaa gatcgatgtg tggagtttgg tacctgttgg ttccgccagc tgtaccatag 1260 ccgcgctcgg tacttcggac cgtgataccg tggtggagct ctccgaatgg ggaattcctt 1320 gcgccacctg tattctggat cgtcggcccg cctcatgcgg cacttgtgtg cgggactgct 1380 ggcccgagac cgggtcagtg aggttccctt tccacaggtg cggcgcgggg cttaggctga 1440 ctagagactt ggaagctgtg cccttcgtca acaggacaac tcccttcacc ataaggggcc 1500 ccctgggcaa ccaggggaga ggcaatccgg tgcgatcgcc cttgggtttt gggtcctacg 1560 ccatgaccaa gatccgagac tccttacatc tggtgaaatg tcccacccca gccattgagc 1620 ctcccaccgg gacgtttggg ttcttccccg ggactccccc gctaaacaac tgcatgctct 1680 tgggcactga ggtgtctgag gtgctgggcg gcgcgggact cacggggggg ttctatgaac 1740 ccctggtgcg gcggtgttca gagttagctg ggaagcgaaa tccggtctgc cctgggttcg 1800 catggctgtc ctcgggcagg cctgatgggt ttatacatgt tcagggccac ctgcaggagg 1860 tggatgcggg aaacttcata ccgcctcctc gctggttgct gttggacttt gtatttgtcc 1920 ttctctatct gatgaagctg gctgaggcta gg 1952 // ID AB000151; SV 1; linear; genomic RNA; STD; VRL; 334 BP. XX AC AB000151; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: CG16LC. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-334 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; c258ad92b75a5f501a7fce56b0e5ef06. XX FH Key Location/Qualifiers FH FT source 1..334 FT /organism="GB virus C" FT /isolate="CG16LC" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..265 FT CDS 266..>334 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10710" FT /protein_id="BAA19817.1" FT /translation="MAVLLLLLVVEAGAILAPATHAC" XX SQ Sequence 334 BP; 53 A; 108 C; 107 G; 64 T; 2 other; ttaaaccgag cccattaccc acctgggcaa acgacgccca cgtacggtcc acgtcgccct 60 tcaatgtctc tcttgaccaa taggctaagc cggcgagttg acaaggacca gtgggggccg 120 ggcggcgggg gaaggacccc cgtcgctgcc cttcccggtg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaar arccttcggg tgagggcggg 240 tggcattttt ctttccttac cgatcatggc agtcctgctg cttcttctcg tggtggaggc 300 cggggccatt ctggccccgg ccacacacgc ttgt 334 // ID AB000152; SV 1; linear; genomic RNA; STD; VRL; 334 BP. XX AC AB000152; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: CG17LC. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-334 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; d80ff8036b1a095447d3fd8de5ca39f2. XX FH Key Location/Qualifiers FH FT source 1..334 FT /organism="GB virus C" FT /isolate="CG17LC" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..265 FT CDS 266..>334 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10711" FT /protein_id="BAA19818.1" FT /translation="MAVLLLFLVVEAGAILAPATHAC" XX SQ Sequence 334 BP; 55 A; 107 C; 104 G; 67 T; 1 other; ttaaaccgag cccattaccc acctgggcaa acgacgccca cgtacggtcc acgtcgccct 60 tcaatgtctc tcttgaccaa taggcttagc cggcgagttg acaaggacca gtgggggccg 120 ggcggtaggg gaaggacccc tatcgctgcc cttcccggtg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaar agccttcggg tgagggcggg 240 tggcattttc tttcctatac cgatcatggc agtccttctg ctcttcctcg tcgtggaggc 300 cggggccatc ttggccccgg ccacacatgc ttgt 334 // ID AB000153; SV 1; linear; genomic RNA; STD; VRL; 334 BP. XX AC AB000153; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: CG18LC. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-334 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; 15b1c827c29029e336a36d97fa44e03e. XX FH Key Location/Qualifiers FH FT source 1..334 FT /organism="GB virus C" FT /isolate="CG18LC" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..265 FT CDS 266..>334 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10712" FT /protein_id="BAA19819.1" FT /translation="MAVLLLLLVVEAGAILAPATHAC" XX SQ Sequence 334 BP; 54 A; 108 C; 106 G; 64 T; 2 other; ttaaaccgag cccattaccc gcctgggcaa acaacgccca cgtacggccc acgtcgccct 60 tcaatgtctc tcttgaccaa taggcttagc cggcgagttg acaagggcca gtgggggctg 120 ggcggcaggg gaaggacccc tgtcgctgcc catcccggcg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaar arccttcggg tgagggcggg 240 tggcattctt ctttccttac cgatcatggc agtccttctg cttcttctag tggtggaggc 300 cggggccatc ctggccccgg ccacacatgc ttgt 334 // ID AB000154; SV 1; linear; genomic RNA; STD; VRL; 334 BP. XX AC AB000154; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: CG19HC. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-334 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; af3a810a103c7cdf640a032611bf1b95. XX FH Key Location/Qualifiers FH FT source 1..334 FT /organism="GB virus C" FT /isolate="CG19HC" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..265 FT CDS 266..>334 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10713" FT /protein_id="BAA19820.1" FT /translation="MAVLLLLLVVEAGAILAPATHAC" XX SQ Sequence 334 BP; 52 A; 106 C; 105 G; 67 T; 4 other; ttaaaccgag cccattancc acctgggcaa acgacgccca cgtacggccc acgtcgccct 60 tcaatgtctc tcttgaccaa taggcatagc cggcgagttg gcaagggcca gtgggggccg 120 ggcggcaggg gaaggacccc tgtccgctgc ccttcccggt ggggtgggaa atgcatgggg 180 ccacccagct ccgcggcggc ctgcagccgg ggtagcccaa rarccttcgg gtgagggcgg 240 gtggcatttt tcttttctac cgatcatggc agtccttctg cttcttctcg ttgtggargc 300 cggggccatt ctggccccgg ccacacatgc ttgt 334 // ID AB000155; SV 1; linear; genomic RNA; STD; VRL; 334 BP. XX AC AB000155; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: CG21HC. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-334 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; 2e066776d5a4e7158888bdddd6a8115e. XX FH Key Location/Qualifiers FH FT source 1..334 FT /organism="GB virus C" FT /isolate="CG21HC" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..265 FT CDS 266..>334 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10714" FT /protein_id="BAA19821.1" FT /translation="MAVLLLLFVVEAGAILAPATHAC" XX SQ Sequence 334 BP; 51 A; 107 C; 106 G; 68 T; 2 other; ttaaaccgag cccattaccc acctgggcaa acaacgccca cgtacggccc acgtcgccct 60 tcaatgtctc tcttgaccaa taggctttgc cggcgagttg acaagggcca gtgggggctg 120 ggcggcgggg gaaggacccc cgtcgctgcc cttcccggtg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaar arccttcggg tgagggcggg 240 tggcattttc ttttcttaac cgatcatggc agtccttctg cttctcttcg ttgtggaggc 300 cggggccatt ctggccccgg ccacgcacgc ttgt 334 // ID AB000156; SV 1; linear; genomic RNA; STD; VRL; 334 BP. XX AC AB000156; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: CG22HC. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-334 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; 1e49d372f99f3b1f3c3a608304c05ee2. XX FH Key Location/Qualifiers FH FT source 1..334 FT /organism="GB virus C" FT /isolate="CG22HC" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..265 FT CDS 266..>334 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10715" FT /protein_id="BAA19822.1" FT /translation="MAVLLLLFVVEAGAILAPATHAC" XX SQ Sequence 334 BP; 55 A; 107 C; 104 G; 66 T; 2 other; ttaaaccgag cccactaccc acctgggcaa acaacgccca cgtacggtcc acgtcgccct 60 tcaatgtctc tcttgaccaa taggcttagc cggcgagttg acaaggacca gtgggggctg 120 ggcggcgggg gaaggacccc cgtcgctgcc cttcccggtg gagtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaar arccttcggg tgagggcggg 240 tggcatttct ttttcctaac cgatcatggc agtccttctg cttctcttcg tggtggaggc 300 cggggccatt ctggccccgg ccacacatgc ttgt 334 // ID AB000157; SV 1; linear; genomic RNA; STD; VRL; 334 BP. XX AC AB000157; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: G01BD. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-334 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; e77101dd364bec74f4fb4046808172e7. XX FH Key Location/Qualifiers FH FT source 1..334 FT /organism="GB virus C" FT /isolate="G01BD" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..265 FT CDS 266..>334 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10716" FT /protein_id="BAA19823.1" FT /translation="MAVLLLLLVVEAGAILAPATHAC" XX SQ Sequence 334 BP; 55 A; 103 C; 105 G; 70 T; 1 other; ttaaaccgag cccattaccc atctgggcaa acgacgccca cgtacggtcc acgtcgccct 60 acaatgtctc tcttgaccaa taggctttgc cggcgagttg acaaggacca gtgggggccg 120 ggcggcaggg gaaggacccc tgtcgctgcc cttcccgatg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaar aaccttcggg tgagggcggg 240 tggcatttct ttttctgtac cgatcatggc agtccttctg cttcttctgg ttgtggaggc 300 cggggccatt ctggccccgg ccacacatgc ttgt 334 // ID AB000158; SV 1; linear; genomic RNA; STD; VRL; 1951 BP. XX AC AB000158; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: G02BD. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-1951 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; 6808110f7fcd4c0f29465428b90724df. XX FH Key Location/Qualifiers FH FT source 1..1951 FT /organism="GB virus C" FT /isolate="G02BD" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..265 FT CDS 266..>1951 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="InterPro:IPR024347" FT /db_xref="UniProtKB/TrEMBL:O10717" FT /protein_id="BAA19824.1" FT /translation="MAVLLLLFVVEAGAILAPATHACGTNGQYFLTNCCALEDIGFCLE FT GGCLVALGCTVCTDRCWPLYQAGLAVRPGKSAAQLVGELGSLYGPLSVSAYVAGILGLG FT EVYSGVLTIGVALTRRVYPVPNLTCAVECELKWESEFWRWTEQLASNYWILEYLWKVPF FT DFWRGVMSLTPLLVCVAALLLLEQRIVMVFLLVTMAGMSQGAPASVMGSRPFEPGLTWQ FT SCSCKANGSRVPTGERVWDXGNVTLLCDCPNGPWVWLPAVCQAIGWGNPITHWSHGQNQ FT WPLSCPQFVYGAVSVTCVWGSVSWFASTGGRDSKIDVWSLVPVGSASCTIAALGSSDRD FT TVPELSEWGIPCATCILDRRPASCGTCVRDCWPETGSVRFPFHRCGAGPRLTRDLEAVP FT FVNRTTPFTIRGPLGNQGRGNPVRSPLGFGSYTMTKIRDSLHLVKCPTPAIEPPTGTFG FT FFPGTPPLNNCMLLGTEVSEALGGAGLTGGFYEPLVRRCSELAGRRNPVCPGFAWLSSG FT RPDGFIHVQGHLQEVDAGNFIPPPRWLLLDFVFVLLYLMKLAEAR" XX SQ Sequence 1951 BP; 299 A; 563 C; 646 G; 441 T; 2 other; ttaaaccgag cccattaccc acctgggcaa acaacgccca cgtacggccc acgtcgccct 60 tcaatgtctc tcttgaccaa taggctaagc cggcgagttg acaagggcca gtgggggctg 120 ggcggcaggg gaaggacccc tgtcgctgcc cttcccggtg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaan aaccttcggg tgagggcggg 240 tggcattctt tttcctgtac cgatcatggc agtccttctg cttctcttcg tggtggaggc 300 cggggccatc ttggccccgg ccacccatgc ttgtggaacg aatgggcaat atttcctcac 360 aaactgttgc gccttggagg acattgggtt ctgccttgag ggtggatgcc tggtggcctt 420 gggctgcacc gtttgtactg accgctgctg gccactgtat caggcggggt tagccgtgcg 480 gcctggcaag tccgcggccc agttggtggg ggagctcggg agcctttacg ggcccctgtc 540 ggtgtccgct tacgtggcgg gcatcctcgg gcttggagag gtttactcgg gagtccttac 600 catcggggtg gcgttgacgc gccgggtcta cccggtcccg aacctgactt gtgcagtaga 660 atgtgagctg aagtgggaaa gtgagttttg gagatggact gagcagttgg cctccaatta 720 ctggatactg gaatatctct ggaaagtgcc ttttgacttc tggcgtggag tgatgagcct 780 gacgcccctg ctggtgtgcg tcgcggccct tctcctgctt gagcaaagga ttgtcatggt 840 cttcctgttg gtaaccatgg cggggatgtc gcaaggcgcc cctgcctcgg tgatggggtc 900 acgccccttc gagcccgggt tgacttggca gtcctgctct tgtaaggcga atgggtcgcg 960 cgtgcccact ggggagcggg tttgggaccn agggaacgtc acactcctgt gtgactgccc 1020 caacgggccc tgggtctggc tgcctgccgt ttgccaagcg atcggctggg gcaacccaat 1080 cacgcactgg agccacggac aaaatcagtg gcccctgtca tgcccccagt tcgtctacgg 1140 tgctgtttca gtgacctgcg tttggggttc cgtgtcttgg tttgcttcca cgggaggtcg 1200 cgattcgaag atcgatgtgt ggagtttggt gccagttggc tcagccagct gcaccatagc 1260 cgcactcggg tcatcggacc gcgacaccgt gccggagctc tccgagtggg ggatcccttg 1320 cgccacctgc atcctggacc gtcggcctgc ctcgtgtggc acctgtgtga gggactgctg 1380 gcccgagacc gggtcggtgc gattcccgtt ccatcggtgc ggcgcggggc cgcggctgac 1440 aagagacttg gaagctgtgc ccttcgtcaa caggacaact cccttcacca taaggggccc 1500 cctgggcaac cagggtcgag gcaacccggt gcggtcgccc ctgggttttg ggtcctacac 1560 catgaccaag atccgggact ccttacattt ggtgaaatgt cccacccctg ccattgagcc 1620 tcccaccggg acgtttgggt tcttccccgg gactcccccg cttaacaact gcatgctcct 1680 gggcactgag gtgtctgagg cgctgggcgg cgcggggctc acgggggggt tctatgaacc 1740 cctggtgcgg cggtgttcag agttagctgg gaggcgaaat ccggtttgtc cggggttcgc 1800 gtggctatcc tcgggcaggc ctgacgggtt tatacatgtc cagggtcacc tgcaggaggt 1860 ggatgcgggc aacttcatac cgcctcctcg ctggctgctg ctggattttg tatttgtcct 1920 actctatctg atgaagctgg ctgaggctag g 1951 // ID AB000159; SV 1; linear; genomic RNA; STD; VRL; 334 BP. XX AC AB000159; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: G03BD. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-334 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; 2a48daf0ceedfc9bf29b6393a16e9f44. XX FH Key Location/Qualifiers FH FT source 1..334 FT /organism="GB virus C" FT /isolate="G03BD" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..265 FT CDS 266..>334 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10718" FT /protein_id="BAA19825.1" FT /translation="MAVLLLLFVVEAGAILAPATHAC" XX SQ Sequence 334 BP; 52 A; 107 C; 105 G; 68 T; 2 other; ttaaaccgag cccattaccc acctgggcaa acaacgccca cgtacggccc acgtcgccct 60 tcaatgtctc tcttgaccaa taggcttagc cggcgagttg acaagggcca gtgggggctg 120 ggcggcaggg gaaggacccc tgtcgctgcc cttcccggtg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaar arccttcggg tgagggcggg 240 tggcattttc ttttccttac cgatcatggc agtccttctg cttctcttcg ttgtggaggc 300 cggggccatt ctggccccgg ccacgcacgc ttgt 334 // ID AB000160; SV 1; linear; genomic RNA; STD; VRL; 334 BP. XX AC AB000160; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: G04BD. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-334 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; be79090085587402c8c02110c50aa8c2. XX FH Key Location/Qualifiers FH FT source 1..334 FT /organism="GB virus C" FT /isolate="G04BD" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..265 FT CDS 266..>334 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10719" FT /protein_id="BAA19826.1" FT /translation="MAVLLLLFVVEAGAILAPATHAC" XX SQ Sequence 334 BP; 53 A; 108 C; 105 G; 66 T; 2 other; ttaaaccgag cccattaccc acctgggcaa acaacgccca cgtacggccc acgtcgccct 60 tcaatgtctc tcttgaccaa taggcttagc cggcgagttg acaagggcca gtgggggctg 120 ggcggcgggg gaaggacccc cgtcgctgcc cttcccggtg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaar aaccttcggg tgarggcggg 240 tggcattttt ctttcctaac cgatcatggc agtccttctg cttctcttcg ttgtggaggc 300 cggggccatt ctggccccgg ccacgcacgc ttgt 334 // ID AB000161; SV 1; linear; genomic RNA; STD; VRL; 1952 BP. XX AC AB000161; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: G05BD. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-1952 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; e463342647a2d3eb5e8eb21d391ba78a. DR EuropePMC; PMC86171; 10655364. XX FH Key Location/Qualifiers FH FT source 1..1952 FT /organism="GB virus C" FT /isolate="G05BD" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..266 FT CDS 267..>1952 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="InterPro:IPR024347" FT /db_xref="UniProtKB/TrEMBL:O10720" FT /protein_id="BAA19827.1" FT /translation="MAVLLLLFVVEAGAILAPATHACXTNGQYFLTNCCAMEDIGFCLE FT GGCLVXLGCTVCTDRCWPLYQAGLAVRPGKSAAQLVGELGSLFGPLSVSAYVAGILGLG FT EVYSGVLTVGVALTRRVYPVPNLTCAVECELRWESEFWRWTEQLASNYWILEYLWKVPF FT DFWRGVMSLTPLLVCVAALLLLEQRVVMVFLLVTMAGMSQGAPASVLGSRPFEPGLTWD FT SCSCRANGSRVPTGEKVWERGNVTLLCDCPNGPWVWLPAFCQAIGWGDPITHWSHGQHQ FT WPLSCPQYVYGAVSVTCVWGSVSWFASTGGRDSKIDVWSLVPHGSASCTIAALGSSDRD FT VVVELSEWGVPCATCILDRRPASCGTCVRDCWPETGSLRYPFHRCGAGPRLTRDLEAVP FT FVNRTTPFAIRGPLGNQGRGNPVRSPLGFGSYTMTKIRDSLHLVKCPTPAVKPPTGTFG FT FFPGVPPLNNCMLLGTEVSEALGGAGLTGGFYEPLVRRCSELMGRRNPVCPGFAWLSSG FT RPDGFIHVQGHLQEVDAGNFIPPPRWLLLDFVFVLLYLMKLAEAR" XX SQ Sequence 1952 BP; 301 A; 549 C; 634 G; 463 T; 5 other; ttaaactgag accacttccc acctgggcaa acgacgccca cgtacggtcc acgtcgccct 60 tcaatgtctc tcttgaccaa taggctttgc cggcgagttg acaaggacca gtgggggccg 120 ggcacgtgag ggagggaccc tccgtgctgc ccttcccggt ggtgtggtaa atgcatgggg 180 ccacccagct ccgcggcggc ctgcagccgg ggtagcccaa naaccttcgg gtgagggcgg 240 gtggcatttt cctttcctga cnaatcatgg cagtccttct gcttctcttc gtggttgagg 300 ccggggccat tctggccccg gccacccacg cttgtaraac gaatgggcaa tatttcctca 360 caaactgttg cgccatggag gacatcgggt tctgcctgga aggcgggtgc ctggtarccc 420 ttgggtgcac cgtttgtact gaccgatgct ggccactgta tcaggcggga ttggctgtgc 480 ggcctggcaa gtccgccgcc cagttagtgg gggagctagg aagccttttc ggacccctat 540 cggtttcggc ttacgtggcc ggaatcttgg ggctcgggga ggtttattct ggcgtcctca 600 ctgtgggtgt tgcgttgacg cgccgggtct acccggtccc caacttgacg tgygcagtcg 660 agtgtgagtt gaggtgggag agtgagtttt ggagatggac tgagcagttg gcctccaatt 720 actggattct ggaatacctc tggaaagtgc cttttgactt ctggcgggga gtgatgagcc 780 tgaccccctt gttggtgtgc gttgcagctc tcctcctgct ggagcaacga gtcgtcatgg 840 tcttcctgtt agtcaccatg gccgggatgt cgcaaggtgc cccggcctcg gtgcttgggt 900 ctcggccctt tgagccggga ttgacatggg attcttgctc ctgcagggcg aacggttcgc 960 gcgtgcctac tggggagaag gtttgggagc gagggaacgt cacactattg tgtgactgcc 1020 ccaacggtcc ctgggtttgg ctgccggcct tttgccaggc aatcggctgg ggcgacccta 1080 tcactcattg gagccacgga caacatcagt ggcccctgtc atgcccccag tatgtctacg 1140 gtgctgtttc agtgacctgc gtttggggtt ccgtgtcttg gtttgcctcc acaggcggcc 1200 gtgattctaa gatcgacgtg tggagtctgg tgccgcatgg ctctgccagt tgcaccatag 1260 ccgcactcgg gtcgtcggat cgcgacgtcg tggttgagct ctccgagtgg ggagtcccct 1320 gcgccacctg cattctggat cgtcggccag cctcgtgcgg cacctgtgtg cgggactgtt 1380 ggcccgagac cgggtcatta cggtacccat tccatcggtg cggtgcgggg cctcggctga 1440 cacgtgactt ggaggctgtg cccttcgtca acaggacaac tcccttcgcc atacgaggac 1500 ccctgggcaa ccagggccgg ggcaatccgg tgcggtcccc cctgggtttt gggtcctaca 1560 ccatgaccaa aatccgggac tcgttacatc tggtgaagtg tcccaccccc gccgttaagc 1620 ctccgactgg gacgttcggg ttcttccctg gagtgccccc gctgaacaac tgcatgctat 1680 tggggacgga agtctctgaa gcattgggcg gagcgggcct cacggggggg ttctatgagc 1740 ccctagtcag gcggtgttca gagctgatgg gtcggcgaaa tccagtctgc cccgggtttg 1800 catggctatc ctcgggcaga cctgacgggt ttatacatgt tcaggggcac ttgcaggagg 1860 tggatgcggg caactttatt ccgcctccgc gttggctgct cctggatttt gtgtttgtcc 1920 tgttatacct gatgaagctg gcggaggcga gg 1952 // ID AB000162; SV 1; linear; genomic RNA; STD; VRL; 334 BP. XX AC AB000162; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: G06FH. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-334 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; 536609d145cc7af2eb82090602d1ba6e. XX FH Key Location/Qualifiers FH FT source 1..334 FT /organism="GB virus C" FT /isolate="G06FH" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..265 FT CDS 266..>334 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10721" FT /protein_id="BAA19828.1" FT /translation="MAVLLLLLVVEAGAILAPATHAC" XX SQ Sequence 334 BP; 56 A; 104 C; 107 G; 67 T; 0 other; ttaaaccgag cccactaacc acctgggcaa acgacgccca cgtacggtcc acgtcgccct 60 tcaatgtctc tcttgaccaa taggctttgc cggcgagttg acaaggacca gtgggggccg 120 ggcggcgggg gaaggacccc cgtcgctgcc cattccggtg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaaa aacctacggg tgagggcggg 240 tggcattttt ctttctgtac cgatcatggc agtccttctg cttcttctgg ttgtggaggc 300 cggggccatt ctggccccgg ccacacatgc ttgt 334 // ID AB000163; SV 1; linear; genomic RNA; STD; VRL; 335 BP. XX AC AB000163; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: G08CH. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-335 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; b26104faeca4d1d33a7ad331a273f52f. XX FH Key Location/Qualifiers FH FT source 1..335 FT /organism="GB virus C" FT /isolate="G08CH" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..266 FT CDS 267..>335 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10722" FT /protein_id="BAA19829.1" FT /translation="MAVLLLLLVVEAGAILAPATHAC" XX SQ Sequence 335 BP; 59 A; 107 C; 101 G; 67 T; 1 other; ttaaaccgag cccactaccc acctgggcaa acgacgccca cgtacggtcc acgtcgccct 60 acaatgtctc tcttgaccaa taggcttagc cggcgagttg acaaggacca ttgggggccg 120 ggcggcaggg gaaagacccc cgtcgctgcc cttcccggtg gagtgggaaa tgacatgggg 180 ccacccagct ccgcggcggc ctgcagccgg ggtagcccaa aaaccttcgg gtragggcgg 240 gtggcatttt cttttcctta ccgatcatgg cagtccttct gcttcttctg gttgtggagg 300 ccggggccat tctggccccg gccacacatg cttgt 335 // ID AB000164; SV 1; linear; genomic RNA; STD; VRL; 1951 BP. XX AC AB000164; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: G11HC. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-1951 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; 961770f41dc1062581e01e3384b23f70. XX FH Key Location/Qualifiers FH FT source 1..1951 FT /organism="GB virus C" FT /isolate="G11HC" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..265 FT CDS 266..>1951 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="InterPro:IPR024347" FT /db_xref="UniProtKB/TrEMBL:O10723" FT /protein_id="BAA19830.1" FT /translation="MAVLLLLFVVEAGAILAPATHACGANGQYFLTNCCALEDIGFCLE FT GGCLVALGCTVCTDRCWPLYQAGLAVRPGKSAAQLVGELGSFYGPLSVSAYVAGILGLG FT EVYSGVLTVGVALTRRVYPVPNLTCSVECELKWESEFWRWTEQLASNYWILEYLWKVPF FT DFWRGVMSLTPLLVCVAALLLLEQRIVMVFLLVTMAGMSQGAPASVLGSRPFEPGLTWQ FT SCSCRSNGSRLITGERVWDRGNVTLLCDCPNGPWVWLPAVCQAIGWGDPITHWSHGQNQ FT WPLSCPQYVYGAVSVTCVWGSVSWFASTGGRDSKIDVWNLVPXGSASCTIAALGTSDRD FT TVVELSEWGIPCATCILDRRPASCGTCVRDCWPETGSVRFPFHRCGAGPRLTKDLEAVP FT FVNRTTPFTIRGPLGNQGXXNPVRSPLGFGSYTMTKIRDSLHLVKCPTPAIEPPTGTFG FT FFPGTPPLNNCMLLGTEVSEVLGGAGLTGGFYEPLVRRCSELAGKRNPVCPGFAWLSSG FT RPDGFIHVQGHLQEVDAGNFIPPPRWLLLDFVFVLLYLMKLAEAR" XX SQ Sequence 1951 BP; 315 A; 551 C; 617 G; 462 T; 6 other; ttaaaccgag cccattaccc acctgggcaa acaacgccca cgtacggtcc acgtcgccct 60 acaatgtctc tcttgaccaa taggctttgc cggcgagttg acaaggncca gtgggggctg 120 ggcgtcaggg gaaggacccc tggcgctgcc cttcccggtg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaag aaccttcggg tgagggcggg 240 tggcattttt cttcctgtac cgatcatggc agtcctcctg cttctcttcg ttgtggaagc 300 cggggccatc ttggccccgg ccacgcacgc ttgcggagcg aatgggcaat atttcctcac 360 aaactgttgt gccttagagg acatagggtt ctgcctggaa ggcggatgcc ttgtggcctt 420 gggctgcact gtttgtactg accgttgctg gccactgtat caggcgggtt tagccgtgag 480 accaggcaag tccgctgccc agttggtcgg ggaactcggt agcttctacg ggcccctatc 540 ggtgtcagcc tacgtggctg gtatcttggg gctcggcgag gtctactcgg gcgtccttac 600 cgtcggggtg gcgttgacgc gccgggtcta cccggtcccg aatctgactt gttcagtaga 660 atgtgagcta aagtgggaaa gtgagttttg gagatggact gagcagttgg cctccaatta 720 ctggattctg gaatatctct ggaaggtgcc ctttgacttc tggcggggag tgatgagcct 780 gacgcccttg ttggtctgyg tcgcggccct actcctgctt gagcaaagga ttgtcatggt 840 tttcctgctc gtgaccatgg cggggatgtc gcaaggcgcc cccgcctcgg ttttggggtc 900 acgccccttc gagcctggtc taacatggca gtcttgctct tgcaggtcaa atgggtcgcg 960 gctgatcact ggggagcggg tttgggaccg agggaatgtc acactcctgt gtgactgccc 1020 caacggcccc tgggtgtggc tgccagccgt ttgccaagca atcggttggg gcgaccctat 1080 cactcattgg agccacggac aaaatcagtg gcccctctct tgtccccagt atgtctacgg 1140 cgccgtttca gtgacctgcg tttggggctc cgtgtcttgg tttgcctcca ccgggggtcg 1200 tgattccaag atcgatgtgt ggaatttggt gccaaytggc tcagccagtt gcaccatagc 1260 cgctctcggt acttcggatc gtgataccgt ggtggagctc tccgagtggg gaattccctg 1320 cgcaacctgc atcctggatc gtcggcccgc ctcgtgcggc acctgtgtgc gggattgctg 1380 gcccgaaacc gggtcggtac ggttcccatt ccataggtgc ggcgctgggc ctaggctgac 1440 aaaggacttg gaagctgtgc ccttcgtcaa caggacaact cccttcacca taaggggccc 1500 cctgggcaac caggggannn gcaacccggt gcggtcgccc ctgggttttg ggtcctacac 1560 catgaccaag atccgggact ccttacattt ggtgaaatgt cccaccccag ccattgagcc 1620 tcccaccggg acgtttgggt tcttccccgg gactcccccg cttaacaact gcatgctctt 1680 gggcactgag gtgtccgaag tgctgggcgg cgcgggactc acgggggggt tctatgaacc 1740 cctggtgcgc cggtgttcag agttagctgg gaagcgaaat ccggtctgtc cggggttcgc 1800 atggctatcc tcgggcaggc ctgatgggtt tatacatgtt cagggccatc tgcaggaagt 1860 ggatgcgggc aacttcattc cgcctcctcg ctggttgctg ttggactttg tatttgtcct 1920 actctatctg atgaagctgg ctgaggctag g 1951 // ID AB000165; SV 1; linear; genomic RNA; STD; VRL; 1952 BP. XX AC AB000165; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: G13HC. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-1952 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; b84e63e5559509d88dd25c1a107364db. DR EuropePMC; PMC86171; 10655364. XX FH Key Location/Qualifiers FH FT source 1..1952 FT /organism="GB virus C" FT /isolate="G13HC" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..266 FT CDS 267..>1952 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="InterPro:IPR024347" FT /db_xref="UniProtKB/TrEMBL:O10724" FT /protein_id="BAA19831.1" FT /translation="MAVLLLLFVVEAGAILAPATHACGANGQYFLTNCCALKDIGFCLE FT GGCLVALGCTICTDRCWPLYQAGLAVRPGKSAAQLVGELGSLYGPLSVSAYVAGILGLG FT EVYSGVLTVGVALTRRVYPVPNLTCAVECELKWESEFWRWTEQLASNYWILEYLWKVPF FT DFWRGVMSLTPLLVCVAALLLLEQRLVMVFLLVTMAGMSQGAPASVLGSRPFEPGLTWQ FT SCSCRSNGSRIPTGERVWDRGNVTLLCDCPNGPWVWIPAVCQAIGWGDPITHWGHGQNQ FT WPLSCPQYVYGAVSVTCVWGSVSWFASTKGRDSXIDVWSLVPVGSASCTIAALGTSDRD FT TVVELSEWGIPCATCILDRRPASCGTCVRDCWPETGSVRFPFHRCGAGPRLTRDLEAVP FT FVNRTTPFTIRGPLGNQGRGNPVRSPLGFGSYTMTKIRDSLHLVKCPTPAIEPPTGTFG FT FFPGTPPLNNCMLLGTEVSEVLGGAGLTGGFYEPLVRRCSELAGRRNPVCPGFAWLSSG FT RPDGFIHVQGHLQEVDAGNFIPPPRWLLLDFVFVLLYLMKLAEAR" XX SQ Sequence 1952 BP; 314 A; 546 C; 629 G; 462 T; 1 other; ttaaaccgag cccatttccc acctgggcaa acgacgccca cgtacggtcc acgtcgccct 60 tcaatgtctc tcttgaccaa taggctttgc cggcgagttg acaaggacca gtgggggccg 120 ggcagcaggg gaaggacccc tgttgtcgcc cttcccggtg gggatgggaa atgcatgggg 180 ccacccagct ccgcggcggc ctgcagccgg ggtagcccaa gaaccttcgg gtgagggcgg 240 gtggcatttt tcttcctata ccgatcatgg cagtccttct gcttctcttc gttgtggagg 300 ccggggccat tctggccccg gccacacatg cttgtggagc gaatgggcaa tatttcctca 360 caaattgctg tgccttaaag gacatagggt tctgcctgga gggtggatgc cttgtggcct 420 tgggctgcac aatttgtact gaccgttgct ggccactgta tcaggcggga ttggccgtgc 480 gacctggcaa gtccgccgcc cagctggtgg gggaactcgg tagcctctat gggcccttgt 540 cagtgtccgc ctacgtggcg ggcattctgg ggctcggcga ggtttactcg ggggtcctca 600 ctgttggtgt ggcgttgacg cgccgggtct acccggtccc aaatctgact tgtgcagtag 660 agtgtgagct aaagtgggag agtgagtttt ggagatggac tgagcagttg gcctccaatt 720 actggatctt ggagtatctc tggaaagtgc cttttgactt ctggcgggga gtgatgagcc 780 taacacccct gttggtgtgt gttgcggccc tcctcctgct agagcaacga ctcgtcatgg 840 ttttcctgct cgtgaccatg gcggggatgt cgcaaggcgc ccccgcctcg gttttggggt 900 cacgcccctt cgagccagga ctgacgtggc agtcttgctc gtgcaggtcg aacggatcgc 960 gcatacccac tggggagcgg gtttgggacc gagggaatgt tacactattg tgtgactgcc 1020 ccaacggccc ctgggtttgg attccagccg tttgccaagc aattggctgg ggtgacccta 1080 tcactcattg gggccacgga caaaatcagt ggcccctatc gtgtccccag tacgtctatg 1140 gtgctgtttc agtgacctgc gtttggggtt ccgtgtcttg gtttgcctct acgaagggac 1200 gcgattcgar gatcgatgtg tggagtttgg tgccagttgg atctgccagc tgcaccatag 1260 ccgcgctcgg tacgtcggac cgcgacaccg ttgtggagct ctctgagtgg ggaattccct 1320 gcgcaacttg catcctggac cgtcggcccg cctcgtgcgg cacctgtgtg agggactgct 1380 ggcccgaaac cgggtcggtg cgcttcccat tccatcggtg tggagcgggg ccgcggctga 1440 caagagactt ggaagctgtg cccttcgtca ataggacaac tcccttcacc ataaggggcc 1500 ccctgggcaa ccaggggaga ggcaatccgg tgcggtcgcc cttgggtttt gggtcctaca 1560 ccatgaccaa gatccgagac tccttacatc tggtgaaatg ccccaccccg gccattgagc 1620 ctcccaccgg gacgtttggg ttcttccccg ggactccccc gcttaacaac tgcatgctct 1680 tgggcactga ggtgtctgag gtgctgggcg gcgcgggact cacggggggg ttctatgaac 1740 ccctggtgcg gcggtgttca gagctagctg ggaggcgaaa tccggtctgc cctgggtttg 1800 catggctgtc ctcgggcagg cctgatgggt ttatacacgt tcagggccac ttgcaggagg 1860 tggatgcagg caacttcatc cctcccccgc gctggttgct cttggacttt gtatttgtcc 1920 tgctctatct gatgaagctg gctgaggcta gg 1952 // ID AB000166; SV 1; linear; genomic RNA; STD; VRL; 334 BP. XX AC AB000166; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: G14HC. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-334 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; 3e2f11175a6de5c28f876cc086ed409d. XX FH Key Location/Qualifiers FH FT source 1..334 FT /organism="GB virus C" FT /isolate="G14HC" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..265 FT CDS 266..>334 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10725" FT /protein_id="BAA19832.1" FT /translation="MAVLLLLFVVEAGAILAPATHAC" XX SQ Sequence 334 BP; 51 A; 107 C; 107 G; 68 T; 1 other; ttaaaccgag cccactaccc acctgggcaa acaacgccca cgtacggccc acgtcgccct 60 tcaatgtctc tcttgaccaa taggctttgc cggcgagttg acaagggcca gtgggggctg 120 ggcggcaggg gaaggacccc tgtcgctgcc cttcccggtg gggtgggaaa tgcatggggc 180 cacccagctc cgcggcggcc tgcagccggg gtagcccaar agccttcggg tgagggcggg 240 tggcatttct tttctttgac cgatcatggc agtccttctg cttctcttcg ttgtggaggc 300 cggggccatt ctggccccgg ccacgcacgc ttgt 334 // ID AB000167; SV 1; linear; genomic RNA; STD; VRL; 335 BP. XX AC AB000167; XX DT 20-MAY-1997 (Rel. 51, Created) DT 14-NOV-2007 (Rel. 93, Last updated, Version 4) XX DE GB virus C gene for polyprotein, partial cds, isolate: G15XX. XX KW . XX OS GB virus C OC Viruses; Riboviria; Flaviviridae; Pegivirus. XX RN [1] RP 1-335 RA Takahashi K., Hijikata M., Aoyama K., Hosino H., HIno K., Mishiro S.; RT ; RL Submitted (27-DEC-1996) to the INSDC. RL Shunji Mishiro, Toshiba General Hospital, Dept. Medical Sciences; 6-3-22 RL Higashi Oh-i, Shinagawa-ku, Tokyo 140-8522, Japan (Tel:81-3-3764-8981, RL Fax:81-3-3764-8992) XX RN [2] RA Takahashi K., Hijikata M., Aoyama K., Hoshino H., Hino K., Mishiro S.; RT "Characterization of GBV-C/HGV viral genome: comparison among different RT isolates for a ~2Kb-sequence that covers entire E1 and most of 5'UTR and RT E2"; RL Int. Hepatol. Commun. 6:253-263(1997). XX RN [3] RX DOI; 10.1002/(SICI)1096-9071(199601)48:1<60::AID-JMV10>3.3.CO;2-E. RX PUBMED; 8825712. RA Leary T.P., Muerhoff A.S., Simons J.N., Pilot-Matias T.J., Erker J.C., RA Chalmers M.L., Schlauder G.G., Dawson G.J., Desai S.M., Mushahwar I.K.; RT "Sequence and genomic organization of GBV-C: a novel member of the RT flaviviridae associated with human non-A-E hepatitis"; RL J. Med. Virol. 48(1):60-67(1996). XX RN [4] RX DOI; 10.1126/science.271.5248.505. RX PUBMED; 8560265. RA Linnen J., Wages J., Zhang-Keck Z.-Y., Fry K.E., Krawczynski K., Alter H., RA Koonin E., Gallagher M., Alter M., Hadziyannis S., Karayiannis P., Fung K., RA Nakatsuji Y., Shih W.-K., Young L., Piatak M.J., Hoover C., Fernandez J., RA Chen S., Zou J.-C., Morris T., Hyams K.C., Ismay S., Lifson J.D., Hess G., RA Foung, S K.H., Thomas H., Bradley D., Margolis H., Kim J.P.; RT "Molecular cloning and disease association of hepatitis G virus: a RT transfusion-transmissible agent"; RL Science, e1252229 271(5248):505-508(1996). XX DR MD5; aa6c1a7e064133defd9d4ce1955b6664. XX FH Key Location/Qualifiers FH FT source 1..335 FT /organism="GB virus C" FT /isolate="G15XX" FT /mol_type="genomic RNA" FT /isolation_source="serum" FT /note="synonym: Hepatitis GB virus C" FT /db_xref="taxon:54290" FT 5'UTR 1..266 FT CDS 267..>335 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:O10726" FT /protein_id="BAA19833.1" FT /translation="MAVLLLLLVVEAGAILAPATHAC" XX SQ Sequence 335 BP; 55 A; 110 C; 102 G; 66 T; 2 other; ttaaaccgag cccgtaaccc gcctgggcaa acgacgccca cgtacggtcc acgtcgccct 60 tcaatgcctc tcttggacaa taggattttt ccggcgagtt gacaaggacc agtgggggcc 120 gggggcctgg ggaaggaccc cagtccctgc ccttcccggc ggaacgggaa atgcatgggg 180 ccacccagct ccgcggcggc ctgcagccgg ggtagcccaa raaccttcgg gtgagggcgg 240 gtggcatttt cttttyctat accatcatgg cagtccttct gctccttctc gtggttgagg 300 ccggggccat tctggccccg gccacccacg cttgt 335 // ID AB000191; SV 1; linear; genomic RNA; STD; VRL; 497 BP. XX AC AB000191; XX DT 12-MAY-1998 (Rel. 55, Created) DT 18-AUG-2007 (Rel. 92, Last updated, Version 4) XX DE Equine infectious anemia virus RNA for envelope protein, partial cds, clone DE 701F6V-1. XX KW . XX OS Equine infectious anemia virus OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-497 RA Ikuta K.; RT ; RL Submitted (28-DEC-1996) to the INSDC. RL Kazuyoshi Ikuta, Hokkaido University, Institute of immunological science; RL Kita-15 Nishi-7, Kita-Ku, Sapporo, Hokkaido 060, Japan RL (E-mail:zyonghui@imm.hokudai.ac.jp, Tel:011-707-6837, Fax:011-707-6837) XX RN [2] RA Zheng Y., Sentsui H., Nakaya T., Kono Y., Ikuta K.; RT "The pathways for PND region mutations of equine infectious anemia virus RT during febrile episodes"; RL Unpublished. XX RN [3] RX PUBMED; 9188568. RA Zheng Y.-H., Sentsui H., Nakaya T., Kono Y., Ikuta K.; RT "In vivo dynamics of equine infectious anemia viruses emerging during RT febrile episodes: insertions/duplications at the principal neutralizing RT domain"; RL J. Virol. 71(7):5031-5039(1997). XX DR MD5; a978add86f7937621bccdeee727ef5f0. XX FH Key Location/Qualifiers FH FT source 1..497 FT /organism="Equine infectious anemia virus" FT /map="nt. pos. 5801-6306" FT /strain="F6V" FT /isolate="701F6V" FT /mol_type="genomic RNA" FT /clone="701F6V-1" FT /note="isolated from plasma" FT /note="this strain is a variant of V70 isolated from the FT serum of horse 493" FT /db_xref="taxon:11665" FT CDS <1..>497 FT /codon_start=3 FT /gene="env" FT /product="envelope protein" FT /note="gp90 variable region" FT /db_xref="GOA:O70701" FT /db_xref="InterPro:IPR001361" FT /db_xref="UniProtKB/TrEMBL:O70701" FT /protein_id="BAA26088.1" FT /translation="QEYQCQKVNLNESTEYRLEFIDESKEYWGFKWLECNQTENLKTIL FT IPENEMVNINDNDTWIPKGCNETWARVKHCPIDILYGIHPIRLCVQPPFFLVQENKAAN FT NSRISNCGPTIFLGVLEDNKGVIRVNSTTCEVKRKEIKRKDYTGIYQVPIFYTCNFTNI FT TS" XX SQ Sequence 497 BP; 187 A; 61 C; 109 G; 140 T; 0 other; gtcaagagta tcaatgtcaa aaagttaatc ttaatgagag tacggaatat aggctagagt 60 ttattgatga gagtaaggaa tattggggat ttaaatggct agaatgtaat caaacagaaa 120 atcttaagac tatattaata cctgaaaatg agatggtaaa tatcaatgat aatgatacct 180 ggatacctaa ggggtgtaat gagacgtggg caagagtgaa acattgtcct atagatattt 240 tatatgggat acatccaatc aggctgtgtg tacagccacc attttttctg gtacaggaga 300 acaaggctgc taacaattct agaattagca attgtgggcc aacaatattt cttggggttt 360 tagaagataa taagggagta atacgggtga atagtacaac ttgcgaagtg aagagaaaag 420 aaataaagag aaaggattat acagggatct atcaagtacc tatattttat acatgtaatt 480 tcactaacat aacttcc 497 // ID AB000192; SV 1; linear; genomic RNA; STD; VRL; 500 BP. XX AC AB000192; XX DT 12-MAY-1998 (Rel. 55, Created) DT 18-AUG-2007 (Rel. 92, Last updated, Version 3) XX DE Equine infectious anemia virus RNA for envelope protein, partial cds, clone DE 701F6V-2. XX KW . XX OS Equine infectious anemia virus OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-500 RA Ikuta K.; RT ; RL Submitted (28-DEC-1996) to the INSDC. RL Kazuyoshi Ikuta, Hokkaido University, Institute of immunological science; RL Kita-15 Nishi-7, Kita-Ku, Sapporo, Hokkaido 060, Japan RL (E-mail:zyonghui@imm.hokudai.ac.jp, Tel:011-707-6837, Fax:011-707-6837) XX RN [2] RA Zheng Y., Sentsui H., Nakaya T., Kono Y., Ikuta K.; RT "The pathways for PND region mutations of equine infectious anemia virus RT during febrile episodes"; RL Unpublished. XX RN [3] RX PUBMED; 9188568. RA Zheng Y.-H., Sentsui H., Nakaya T., Kono Y., Ikuta K.; RT "In vivo dynamics of equine infectious anemia viruses emerging during RT febrile episodes: insertions/duplications at the principal neutralizing RT domain"; RL J. Virol. 71(7):5031-5039(1997). XX DR MD5; 2c65b32004b6b72a7acb90aa29c73492. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Equine infectious anemia virus" FT /map="nt. pos. 5801-6306" FT /strain="F6V" FT /isolate="701F6V" FT /mol_type="genomic RNA" FT /clone="701F6V-2" FT /note="isolated from plasma" FT /note="this strain is a variant of V70 isolated from the FT serum of horse 493" FT /db_xref="taxon:11665" FT CDS <1..>500 FT /codon_start=3 FT /gene="env" FT /product="envelope protein" FT /note="gp90 variable region" FT /db_xref="GOA:O70702" FT /db_xref="InterPro:IPR001361" FT /db_xref="UniProtKB/TrEMBL:O70702" FT /protein_id="BAA26089.1" FT /translation="QEYQCQKVNLNESMSFERLEFVNNSTEYWGFKWLECNQTENLKTI FT LIPDNEMVHINDSDTWIPKGCNETWARVKRCPIDILYGIHPIRLCVQPPFFLVQENKAA FT NNSRISNCGPTIFLGVLEDNKGVIRGDSTTCEVNRKGIKRKDYTGIYQVPIFYTCNFTN FT ITS" XX SQ Sequence 500 BP; 182 A; 65 C; 112 G; 141 T; 0 other; gtcaagagta tcaatgtcaa aaagttaatc ttaatgagag tatgagcttt gaaaggctag 60 agtttgttaa taacagtacg gaatattggg gatttaaatg gctagaatgt aatcaaacag 120 aaaatcttaa gactatatta atacctgaca atgagatggt acatatcaat gatagtgata 180 cctggatacc taaggggtgt aatgagacgt gggcaagagt gaaacgttgt ccgatagata 240 ttttatatgg gatacatcca atcaggctgt gtgtacagcc accatttttt ctggtacagg 300 agaacaaggc tgctaacaat tctagaatta gcaattgtgg gccaacaata tttcttgggg 360 ttttagaaga taataaagga gtaatacggg gggatagtac aacttgcgaa gtgaatagaa 420 aaggaataaa gagaaaggat tatacaggga tctatcaagt acctatattt tatacatgta 480 atttcactaa cataacttcc 500 // ID AB000193; SV 1; linear; genomic RNA; STD; VRL; 497 BP. XX AC AB000193; XX DT 12-MAY-1998 (Rel. 55, Created) DT 18-AUG-2007 (Rel. 92, Last updated, Version 3) XX DE Equine infectious anemia virus RNA for envelope protein, partial cds, clone DE 701F6V-3. XX KW . XX OS Equine infectious anemia virus OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-497 RA Ikuta K.; RT ; RL Submitted (28-DEC-1996) to the INSDC. RL Kazuyoshi Ikuta, Hokkaido University, Institute of immunological science; RL Kita-15 Nishi-7, Kita-Ku, Sapporo, Hokkaido 060, Japan RL (E-mail:zyonghui@imm.hokudai.ac.jp, Tel:011-707-6837, Fax:011-707-6837) XX RN [2] RA Zheng Y., Sentsui H., Nakaya T., Kono Y., Ikuta K.; RT "The pathways for PND region mutations of equine infectious anemia virus RT during febrile episodes"; RL Unpublished. XX RN [3] RX PUBMED; 9188568. RA Zheng Y.-H., Sentsui H., Nakaya T., Kono Y., Ikuta K.; RT "In vivo dynamics of equine infectious anemia viruses emerging during RT febrile episodes: insertions/duplications at the principal neutralizing RT domain"; RL J. Virol. 71(7):5031-5039(1997). XX DR MD5; 88e15d515ac9ecd30e5460b24c268559. XX FH Key Location/Qualifiers FH FT source 1..497 FT /organism="Equine infectious anemia virus" FT /map="nt. pos. 5801-6306" FT /strain="F6V" FT /isolate="701F6V" FT /mol_type="genomic RNA" FT /clone="701F6V-3" FT /note="isolated from plasma" FT /note="this strain is a variant of V70 isolated from the FT serum of horse 493" FT /db_xref="taxon:11665" FT CDS <1..>497 FT /codon_start=3 FT /gene="env" FT /product="envelope protein" FT /note="gp90 variable region" FT /db_xref="GOA:O70703" FT /db_xref="InterPro:IPR001361" FT /db_xref="UniProtKB/TrEMBL:O70703" FT /protein_id="BAA26090.1" FT /translation="QEYQCQKVNLNESTEYRLEFVNNSTEYWGFKWLECNQTENLKTIL FT IPENEMVHINDSGTWIPKGCNETWARVKRCPIDILYGIHPIRLCVQPPFFLVQENKAAN FT NSRISNCGPTIFLGVLEDNKGVIRGDSTTCEVNRKGIKRKDYTGIYQVPIFYTCNFTNI FT TS" XX SQ Sequence 497 BP; 182 A; 63 C; 111 G; 141 T; 0 other; gtcaagagta tcaatgtcaa aaagttaatc ttaatgagag tacggaatat aggctagagt 60 ttgttaataa tagtacggaa tattggggat ttaaatggct agaatgtaat caaacagaaa 120 atcttaagac tatattaata cctgaaaatg agatggtaca tatcaatgat agtggtacct 180 ggatacctaa ggggtgtaat gagacgtggg caagagtgaa acgttgtcct atagatattt 240 tatatgggat acatccaatc aggctgtgtg tacagccacc attttttctg gtacaggaga 300 acaaggctgc taacaattct agaattagca attgtgggcc aacaatattt cttggggttt 360 tagaagataa taaaggagta atacgggggg atagtacaac ttgcgaagtg aatagaaaag 420 gaataaagag aaaggattat acagggatct atcaagtacc tatattttat acatgtaatt 480 tcactaacat aacttcc 497 // ID AB000194; SV 1; linear; genomic RNA; STD; VRL; 506 BP. XX AC AB000194; XX DT 12-MAY-1998 (Rel. 55, Created) DT 18-AUG-2007 (Rel. 92, Last updated, Version 3) XX DE Equine infectious anemia virus RNA for envelope protein, partial cds, clone DE 701F6V-5. XX KW . XX OS Equine infectious anemia virus OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-506 RA Ikuta K.; RT ; RL Submitted (28-DEC-1996) to the INSDC. RL Kazuyoshi Ikuta, Hokkaido University, Institute of immunological science; RL Kita-15 Nishi-7, Kita-Ku, Sapporo, Hokkaido 060, Japan RL (E-mail:zyonghui@imm.hokudai.ac.jp, Tel:011-707-6837, Fax:011-707-6837) XX RN [2] RA Zheng Y., Sentsui H., Nakaya T., Kono Y., Ikuta K.; RT "The pathways for PND region mutations of equine infectious anemia virus RT during febrile episodes"; RL Unpublished. XX RN [3] RX PUBMED; 9188568. RA Zheng Y.-H., Sentsui H., Nakaya T., Kono Y., Ikuta K.; RT "In vivo dynamics of equine infectious anemia viruses emerging during RT febrile episodes: insertions/duplications at the principal neutralizing RT domain"; RL J. Virol. 71(7):5031-5039(1997). XX DR MD5; c909be31ccfa07ff2d08a0e80b5c6c07. XX FH Key Location/Qualifiers FH FT source 1..506 FT /organism="Equine infectious anemia virus" FT /map="nt. pos. 5801-6306" FT /strain="F6V" FT /isolate="701F6V" FT /mol_type="genomic RNA" FT /clone="701F6V-5" FT /note="isolated from plasma" FT /note="this strain is a variant of V70 isolated from the FT serum of horse 493" FT /db_xref="taxon:11665" FT CDS <1..>506 FT /codon_start=3 FT /gene="env" FT /product="envelope protein" FT /note="gp90 variable region" FT /db_xref="GOA:O70704" FT /db_xref="InterPro:IPR001361" FT /db_xref="UniProtKB/TrEMBL:O70704" FT /protein_id="BAA26091.1" FT /translation="QEYQCQKVNLNESTGNKGLEWLEFVNNSTEYWGFKWLECNQTENL FT KTILIPDNEMVNINNDTWIPKGCNETWARVKRCPIDILYGIHPIRLCVQPPFFLVQENK FT AANNSRISNCGPTIFLGVLEDNKGVIRVNSTTCEVKRKEIKRKDYTGIYQVPIFYTCNF FT TNITS" XX SQ Sequence 506 BP; 188 A; 64 C; 112 G; 142 T; 0 other; gtcaagagta tcaatgtcaa aaagttaatc ttaatgagag tacgggaaat aagggacttg 60 aatggctaga gtttgttaat aatagtacgg aatattgggg atttaaatgg ctagaatgta 120 atcaaacaga aaatcttaag actatattaa tacctgataa tgagatggta aatatcaata 180 atgatacctg gatacctaag gggtgtaacg agacgtgggc aagagtgaaa cgttgtccta 240 tagatatttt atatgggata catccaatca ggctgtgtgt acagccacca ttttttctgg 300 tacaggagaa caaggctgct aacaattcta gaattagcaa ttgtgggcca acaatatttc 360 ttggggtttt agaagataat aagggagtaa tacgggtgaa tagtacaact tgcgaagtga 420 agagaaaaga aataaagaga aaggattata cagggatcta tcaagtacct atattttata 480 catgtaattt cactaacata acttcc 506 // ID AB000195; SV 1; linear; genomic RNA; STD; VRL; 500 BP. XX AC AB000195; XX DT 12-MAY-1998 (Rel. 55, Created) DT 18-AUG-2007 (Rel. 92, Last updated, Version 3) XX DE Equine infectious anemia virus RNA for envelope protein, partial cds, clone DE 701F6V-7. XX KW . XX OS Equine infectious anemia virus OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-500 RA Ikuta K.; RT ; RL Submitted (28-DEC-1996) to the INSDC. RL Kazuyoshi Ikuta, Hokkaido University, Institute of immunological science; RL Kita-15 Nishi-7, Kita-Ku, Sapporo, Hokkaido 060, Japan RL (E-mail:zyonghui@imm.hokudai.ac.jp, Tel:011-707-6837, Fax:011-707-6837) XX RN [2] RA Zheng Y., Sentsui H., Nakaya T., Kono Y., Ikuta K.; RT "The pathways for PND region mutations of equine infectious anemia virus RT during febrile episodes"; RL Unpublished. XX RN [3] RX PUBMED; 9188568. RA Zheng Y.-H., Sentsui H., Nakaya T., Kono Y., Ikuta K.; RT "In vivo dynamics of equine infectious anemia viruses emerging during RT febrile episodes: insertions/duplications at the principal neutralizing RT domain"; RL J. Virol. 71(7):5031-5039(1997). XX DR MD5; 5088cbf59ebf17665c20fb8ec1037880. XX FH Key Location/Qualifiers FH FT source 1..500 FT /organism="Equine infectious anemia virus" FT /map="nt. pos. 5801-6306" FT /strain="F6V" FT /isolate="701F6V" FT /mol_type="genomic RNA" FT /clone="701F6V-7" FT /note="isolated from plasma" FT /note="this strain is a variant of V70 isolated from the FT serum of horse 493" FT /db_xref="taxon:11665" FT CDS <1..>500 FT /codon_start=3 FT /gene="env" FT /product="envelope protein" FT /note="gp90 variable region" FT /db_xref="GOA:O70705" FT /db_xref="InterPro:IPR001361" FT /db_xref="UniProtKB/TrEMBL:O70705" FT /protein_id="BAA26092.1" FT /translation="QEYQCQKVNLNESMSFERLEFVNNSTEYWGFKWLECNQTENLKTI FT LIPENEMVNVNGSDTWIPKGCNETWARVKRCPIDILYGIHPIRLCVQPPFFLVQENKTA FT NNSRISNCGPTIFLGVLEDNKGVIRVNSTTCEVKRKEIERKDYTGIYQVPIFYTCNFTN FT ITS" XX SQ Sequence 500 BP; 183 A; 63 C; 112 G; 142 T; 0 other; gtcaagagta tcaatgtcaa aaagttaatc ttaatgagag tatgagcttt gaaaggctag 60 agtttgttaa taacagtacg gaatattggg gatttaaatg gctagaatgt aatcaaacag 120 aaaatcttaa gactatatta atacctgaaa atgagatggt aaatgtcaat ggtagtgata 180 cctggatacc taaggggtgt aatgagacgt gggcaagagt gaaacgttgt cctatagata 240 ttttatatgg gatacatcca atcaggctgt gtgtacagcc accatttttt ctggtacagg 300 agaacaagac tgctaacaat tctagaatta gcaattgtgg gccaacaata tttcttgggg 360 ttttagaaga taataaggga gtaatacggg tgaatagtac aacttgcgaa gtgaagagaa 420 aagaaataga gagaaaggat tatacaggga tctatcaagt acctatattt tatacatgta 480 atttcactaa cataacttcc 500 // ID AB000196; SV 1; linear; genomic RNA; STD; VRL; 509 BP. XX AC AB000196; XX DT 12-MAY-1998 (Rel. 55, Created) DT 18-AUG-2007 (Rel. 92, Last updated, Version 3) XX DE Equine infectious anemia virus RNA for envelope protein, partial cds, clone DE 701F7V-1. XX KW . XX OS Equine infectious anemia virus OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-509 RA Ikuta K.; RT ; RL Submitted (28-DEC-1996) to the INSDC. RL Kazuyoshi Ikuta, Hokkaido University, Institute of immunological science; RL Kita-15 Nishi-7, Kita-Ku, Sapporo, Hokkaido 060, Japan RL (E-mail:zyonghui@imm.hokudai.ac.jp, Tel:011-707-6837, Fax:011-707-6837) XX RN [2] RA Zheng Y., Sentsui H., Nakaya T., Kono Y., Ikuta K.; RT "The pathways for PND region mutations of equine infectious anemia virus RT during febrile episodes"; RL Unpublished. XX RN [3] RX PUBMED; 9188568. RA Zheng Y.-H., Sentsui H., Nakaya T., Kono Y., Ikuta K.; RT "In vivo dynamics of equine infectious anemia viruses emerging during RT febrile episodes: insertions/duplications at the principal neutralizing RT domain"; RL J. Virol. 71(7):5031-5039(1997). XX DR MD5; 0efcc8772f5d902cb870036c9f091f56. XX FH Key Location/Qualifiers FH FT source 1..509 FT /organism="Equine infectious anemia virus" FT /map="nt. pos. 5801-6306" FT /strain="F7V" FT /isolate="701F7V" FT /mol_type="genomic RNA" FT /clone="701F7V-1" FT /note="isolated from plasma" FT /note="this strain is a variant of V70 isolated from the FT serum of horse 493" FT /db_xref="taxon:11665" FT CDS <1..>509 FT /codon_start=3 FT /gene="env" FT /product="envelope protein" FT /note="gp90 variable region" FT /db_xref="GOA:O70706" FT /db_xref="InterPro:IPR001361" FT /db_xref="UniProtKB/TrEMBL:O70706" FT /protein_id="BAA26093.1" FT /translation="QEYQCQKVNVKESEKHREVKWLGSANESTEYWGFKWLECNQTENL FT KTILIPENEMVNVNGSDTWIPKGCNETWARVKRCPIDILYGIHPIRLCVQPPFFLVQEN FT KAANNSTISNCGPTIFLGVLEDNKGVIRVNSTTCEVKRKEIKRKDYTGIYQVPIFYTCN FT FTNITS" XX SQ Sequence 509 BP; 186 A; 66 C; 120 G; 137 T; 0 other; gtcaagagta tcaatgtcaa aaagttaatg ttaaggagag tgagaaacat cgggaagtta 60 aatggctagg gtctgctaat gagagtacgg aatattgggg attcaaatgg ctagaatgta 120 atcaaacaga aaatcttaag actatattaa tacctgaaaa tgagatggta aatgtcaatg 180 gtagtgatac ctggatacct aaggggtgta atgagacgtg ggcaagagtg aaacggtgtc 240 ctatagatat tttatatggg atacatccaa tcaggctgtg tgtacagcca ccattttttc 300 tggtacagga gaacaaggct gctaacaatt ctacaattag caattgtggg ccaacaatat 360 ttcttggggt tttagaagat aataagggag taatacgggt gaatagtaca acttgcgaag 420 tgaagagaaa agaaataaag agaaaggatt atacagggat ctatcaagta cctatatttt 480 atacatgtaa tttcactaac ataacttcc 509 // ID AB000197; SV 1; linear; genomic RNA; STD; VRL; 491 BP. XX AC AB000197; XX DT 12-MAY-1998 (Rel. 55, Created) DT 18-AUG-2007 (Rel. 92, Last updated, Version 3) XX DE Equine infectious anemia virus RNA for envelope protein, partial cds, clone DE 701F7V-2. XX KW . XX OS Equine infectious anemia virus OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-491 RA Ikuta K.; RT ; RL Submitted (28-DEC-1996) to the INSDC. RL Kazuyoshi Ikuta, Hokkaido University, Institute of immunological science; RL Kita-15 Nishi-7, Kita-Ku, Sapporo, Hokkaido 060, Japan RL (E-mail:zyonghui@imm.hokudai.ac.jp, Tel:011-707-6837, Fax:011-707-6837) XX RN [2] RA Zheng Y., Sentsui H., Nakaya T., Kono Y., Ikuta K.; RT "The pathways for PND region mutations of equine infectious anemia virus RT during febrile episodes"; RL Unpublished. XX RN [3] RX PUBMED; 9188568. RA Zheng Y.-H., Sentsui H., Nakaya T., Kono Y., Ikuta K.; RT "In vivo dynamics of equine infectious anemia viruses emerging during RT febrile episodes: insertions/duplications at the principal neutralizing RT domain"; RL J. Virol. 71(7):5031-5039(1997). XX DR MD5; 019106b2be5e4b8200ec994584de4fc8. XX FH Key Location/Qualifiers FH FT source 1..491 FT /organism="Equine infectious anemia virus" FT /map="nt. pos. 5801-6306" FT /strain="F7V" FT /isolate="701F7V" FT /mol_type="genomic RNA" FT /clone="701F7V-2" FT /note="isolated from plasma" FT /note="this strain is a variant of V70 isolated from the FT serum of horse 493" FT /db_xref="taxon:11665" FT CDS <1..>491 FT /codon_start=3 FT /gene="env" FT /product="envelope protein" FT /note="gp90 variable region" FT /db_xref="GOA:O70707" FT /db_xref="InterPro:IPR001361" FT /db_xref="UniProtKB/TrEMBL:O70707" FT /protein_id="BAA26094.1" FT /translation="QEYQCQKVNLTERTEYRLEFVNNSTKYWGFKWLECNQTENLKTIL FT IPENEMVNINDTWIPKGCNETWARVKRCPIDILYGIHPIRLCVQPPFFLVQENKAANNS FT TISNCGPTIFLGVLEDNKGVIRVNSTTCEVKRKEIRRKDYTGIYQVPIFYTCNFTNITS FT " XX SQ Sequence 491 BP; 182 A; 65 C; 107 G; 137 T; 0 other; gtcaagagta tcaatgtcaa aaagttaatc ttactgagag gacggaatat aggctagagt 60 ttgttaataa tagtacgaaa tattggggat ttaaatggct agaatgtaat caaacagaaa 120 atcttaagac tatattaata cctgaaaatg agatggtaaa tatcaatgat acctggatac 180 ctaaggggtg taatgagacg tgggcaagag tgaaacgttg tcctatagat attttatatg 240 ggatacatcc aatcaggctg tgtgtacagc caccattttt tctggtacag gagaacaagg 300 ctgctaacaa ttctacaatt agcaattgtg ggccaacaat atttcttggg gttttagaag 360 ataataaggg agtaatacgg gtgaatagta caacctgcga agtgaagaga aaagaaataa 420 ggagaaagga ttatacaggg atctatcaag tacctatatt ttatacatgt aatttcacta 480 acataacttc c 491 // ID AB000198; SV 1; linear; genomic RNA; STD; VRL; 494 BP. XX AC AB000198; XX DT 12-MAY-1998 (Rel. 55, Created) DT 18-AUG-2007 (Rel. 92, Last updated, Version 3) XX DE Equine infectious anemia virus RNA for envelope protein, partial cds, clone DE 701F7V-5. XX KW . XX OS Equine infectious anemia virus OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-494 RA Ikuta K.; RT ; RL Submitted (28-DEC-1996) to the INSDC. RL Kazuyoshi Ikuta, Hokkaido University, Institute of immunological science; RL Kita-15 Nishi-7, Kita-Ku, Sapporo, Hokkaido 060, Japan RL (E-mail:zyonghui@imm.hokudai.ac.jp, Tel:011-707-6837, Fax:011-707-6837) XX RN [2] RA Zheng Y., Sentsui H., Nakaya T., Kono Y., Ikuta K.; RT "The pathways for PND region mutations of equine infectious anemia virus RT during febrile episodes"; RL Unpublished. XX RN [3] RX PUBMED; 9188568. RA Zheng Y.-H., Sentsui H., Nakaya T., Kono Y., Ikuta K.; RT "In vivo dynamics of equine infectious anemia viruses emerging during RT febrile episodes: insertions/duplications at the principal neutralizing RT domain"; RL J. Virol. 71(7):5031-5039(1997). XX DR MD5; cd6bc6f86fc26e6a2c03c300f8f18f61. XX FH Key Location/Qualifiers FH FT source 1..494 FT /organism="Equine infectious anemia virus" FT /map="nt. pos. 5801-6306" FT /strain="F7V" FT /isolate="701F7V" FT /mol_type="genomic RNA" FT /clone="701F7V-5" FT /note="isolated from plasma" FT /note="this strain is a variant of V70 isolated from the FT serum of horse 493" FT /db_xref="taxon:11665" FT CDS <1..>494 FT /codon_start=3 FT /gene="env" FT /product="envelope protein" FT /note="gp90 variable region" FT /db_xref="GOA:O70708" FT /db_xref="InterPro:IPR001361" FT /db_xref="UniProtKB/TrEMBL:O70708" FT /protein_id="BAA26095.1" FT /translation="QEYQCQKVNVNESTEYWEFVIENKEYWGFKWLECNQTENLKTILI FT PDNEMVHINDSDTWIPKGCNETWARVKRCPIDILYGIHPIRLCVQPPFFLVQENKTANN FT SRISNCGPTIFLGVLEDNKGVIRVDSTTCEVNRKGIKRKDYTGIYQVPIFYTCNFTNIT FT S" XX SQ Sequence 494 BP; 182 A; 61 C; 109 G; 142 T; 0 other; gtcaagagta tcaatgtcaa aaagttaatg ttaatgagag tacggaatat tgggaatttg 60 ttattgagaa taaggaatat tggggattta aatggctaga atgtaatcaa acagaaaatc 120 ttaagactat attaatacct gacaatgaga tggtacatat caatgatagt gatacctgga 180 tacctaaggg gtgtaatgag acgtgggcaa gagtgaaacg ttgtcctata gatattttat 240 atgggataca tccaatcagg ctgtgtgtac agccaccatt ttttctggta caggagaaca 300 agactgctaa caattctaga attagcaatt gtgggccaac aatatttctt ggggttttag 360 aagataataa gggagtaata cgggtggata gtacaacttg cgaagtgaat agaaaaggaa 420 taaaaagaaa ggattataca gggatctatc aagtacctat attttataca tgtaatttca 480 ctaacataac ttcc 494 // ID AB000282; SV 1; linear; genomic RNA; STD; VRL; 2409 BP. XX AC AB000282; XX DT 14-DEC-1998 (Rel. 58, Created) DT 03-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Navel orange infectious mottling virus gene for polyprotein (coat protein DE region), partial cds. XX KW . XX OS Navel orange infectious mottling virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Sadwavirus. XX RN [1] RP 1-2409 RA Iwanami T.; RT ; RL Submitted (09-JAN-1997) to the INSDC. RL Contact:Toru Iwanami National Institute of Fruit Tree Science, Department RL of Citriculture,Okitsu; Okitsu, Shimizu, Shizuoka 424-02, Japan XX RN [2] RX DOI; 10.1007/s007050050297. RX PUBMED; 9541624. RA Iwanami T., Kondo Y., Makita Y., Azeyanagi C., Ieki H.; RT "The nucleotide sequence of the coat protein genes of satsuma dwarf virus RT and naval orange infectious mottling virus"; RL Arch. Virol. 143(2):405-412(1998). XX DR MD5; 8405f4548d4276afe7e556ff691b98d3. XX FH Key Location/Qualifiers FH FT source 1..2409 FT /organism="Navel orange infectious mottling virus" FT /host="Citrus unshiu" FT /strain="NI-1" FT /mol_type="genomic RNA" FT /clone="NI8" FT /db_xref="taxon:85516" FT CDS <1..2100 FT /product="polyprotein" FT /note="polyprotein including coat protein" FT /db_xref="GOA:Q9Z0D6" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q9Z0D6" FT /protein_id="BAA35113.1" FT /translation="NVTIESGDNNNNNCPTGNVDNREIPVVEEEEERRRPHGSAIQRGF FT AEFSERNENVIEHLYVPSMHGLSLREDIHLFTENLAIPSTADFCKELARYNVLAKATSF FT KSASYYSRLLSGVAILRPHFKFTFRLVTPILESIPLLVVWDDLSELTTKVSRLSAAFQV FT IDSDHTKAAVYEVRPSGPTDLLTPSKHNYGMGGDIVIFSGGYGSSSLTSALRLKVEASL FT LKDSQLGSGEVSIPQGPSSMLSFSYLNEVDLGDLDLHCFLGSCKYNGTSPVGGRKYISV FT CPAAGLVHNKGKAAYLGLTASLFSMYNFWRGSYILKVDVLSKGSCAGAISIYVPPPGTS FT ADHYTQSQLDTLPRFELAWRGTGTARFEVENFSWVGWHITKPQRFTTNEDWFSLNSGLV FT VVLNQPPTTRAGGSSDIRVMFRIVKFKNLTLRERSTTCDIFTGIKDSVYTHPLVDVLDE FT NISAPASISTDPEVGFESTSSVQAASPLISKNFGAYYAYLLGGASSGKRWHSYVLPITM FT GHHRSEIGSTKTGYLNEALDQTVRIRYSLRNPLHILCSAGAYYATDLLFTLVIDGDFTA FT ERAYAQLGLIQTPLREFYEGYSTDRTLTSEGGSVNQLGVGKSYIQLLVPRRNYRARSIT FT TETAALFIETIGSLSVRFTVSDKIKGVHLFVEAAGPIDIDGYGRGADIGFTESFVLMPS FT LRTAA" XX SQ Sequence 2409 BP; 600 A; 498 C; 565 G; 746 T; 0 other; aatgtcacca ttgaaagtgg tgacaataat aataataatt gtcccaccgg taatgtagat 60 aatagagaaa taccggtggt tgaggaggag gaagagagaa ggcgcccaca tgggagtgcc 120 attcagcgtg gttttgcaga attctcagag cgtaatgaaa atgtgataga gcatctatat 180 gttccatcaa tgcacggatt atctttgcga gaagatatcc atttgtttac cgagaatttg 240 gccatacctt caacagctga tttctgcaag gaattagctc gatataatgt cttggccaaa 300 gccacaagtt ttaagagtgc aagctattat tcacgattac tttctggggt ggcgattctg 360 cgacctcatt ttaaatttac gtttaggctt gttactccta tcctcgagtc cataccactt 420 ctcgtagtct gggatgacct ttctgagctt acaaccaaag tttccagact ctcagccgcc 480 tttcaagtaa ttgattcaga tcatacgaag gcggctgttt atgaagttcg tccatccgga 540 ccaacggact tactcacccc aagcaaacat aattatggca tggggggaga tatagtcatc 600 ttttccggtg ggtatggttc ttcctcgctg acttctgctt tgcgccttaa agtggaggcg 660 agtctactga aggattcgca actaggatca ggagaagtta gtatacccca aggtccgtct 720 tctatgcttt cattcagtta tcttaatgaa gttgatcttg gggacttaga tttacactgt 780 tttttaggta gttgtaaata caatggtact tcgcccgttg gtgggcgaaa gtatatatcc 840 gtgtgtcctg cggctggtct tgtacataat aagggtaaag ccgcttattt aggtcttacg 900 gcttcccttt tttccatgta caatttttgg aggggaagct acattcttaa agtagatgtt 960 ctttcaaagg ggagctgcgc tggagctata agtatttatg ttcctccccc tggaaccagt 1020 gctgaccact atacgcagtc ccagttggac accctcccca gatttgaatt agcctggagg 1080 ggaactggaa ctgcgagatt tgaggtggaa aatttttcct gggttggttg gcatataacg 1140 aagccacaga gattcaccac caatgaagat tggttttctt tgaactctgg actggttgtt 1200 gtgctcaacc aacctccaac tactcgcgct ggaggttcta gtgatatacg ggtcatgttc 1260 agaattgtta aatttaaaaa cctgaccctg agagaacgtt ctactacctg tgatatattt 1320 acaggtatca aagactcggt gtatactcat cccctggtgg atgttcttga cgagaacatt 1380 tcggcaccag catcgatttc cactgaccct gaagtgggat tcgaatcaac atcgagcgtg 1440 caagcagctt cgcccctaat cagcaaaaat tttggagcat actatgctta tctattgggt 1500 ggggcaagct cagggaagag gtggcacagt tatgtgctac ctataacaat gggacatcat 1560 aggagtgaaa ttgggagtac caagaccgga tatctcaacg aagcacttga tcaaacggtc 1620 agaatcaggt attctttgcg gaacccattg catattttat gttccgccgg ggcttattat 1680 gccaccgacc ttctctttac tctggtaatt gacggagatt tcaccgctga acgagcctac 1740 gctcaattgg gcctcataca aactcctctg agggagtttt acgagggtta ttcaaccgat 1800 agaaccctca cttctgaagg gggttctgta aaccaattgg gtgtgggcaa gtcatatatt 1860 caattacttg tcccgagaag gaattatagg gctagatcca ttaccacgga aacagcagcc 1920 ttgtttatcg agactattgg atctctctcg gtccgcttca ctgttagtga taagattaag 1980 ggagtccatt tattcgttga ggctgctggc cctattgata ttgatggata tggacgagga 2040 gctgacattg gattcactga atcttttgtt ctaatgccct ctcttcgtac cgctgcctaa 2100 cttggtagca atgaggtgat gcccaccgga ccttaacgtg ggtttatgta tgtatgtata 2160 tagtgaggtg tgtttctttt cttctctttt tggtgggata ggtgtgcacc ctatcggttc 2220 cagtgcgcgt gctggaacat tgcaaagttt tctgtcgtgt gtttactttg ttttcttttg 2280 tttgttttta tttaaaataa actggatttc aatagagggt ttcttgaact cttccctctt 2340 ccgatccagg agtttggtgt gtttttcttg atttctgcac cggtttcaat cagtgaaaat 2400 ctgatggcc 2409 // ID AB000283; SV 1; linear; genomic RNA; STD; VRL; 2377 BP. XX AC AB000283; XX DT 07-JUL-2006 (Rel. 88, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 2) XX DE Human astrovirus 1 gene for outer capsid protein, complete cds, isolate: S1 DE standard. XX KW . XX OS Human astrovirus 1 OC Viruses; Riboviria; Astroviridae; Mamastrovirus. XX RN [1] RP 1-2377 RA Ushijima H., Kakizawa J., Leying W.; RT ; RL Submitted (08-JAN-1997) to the INSDC. RL Hiroshi Ushijima, Aino University, Aino Health Research Center; Shibuya RL Toho Building 4F, 2-17-3 Shibuya, Shibuya-ku, Tokyo 150-0002, Japan RL (E-mail:ushijima-hiroshi@jcom.home.ne.jp, Tel:81-3-3486-8481, RL Fax:81-3-3486-8481) XX RN [2] RX DOI; 10.1002/jmv.1043. RX PUBMED; 11424111. RA Wang Q.H., Kakizawa J., Wen L.Y., Shimizu M., Nishio O., Fang Z.Y., RA Ushijima H.; RT "Genetic analysis of the capsid region of astroviruses"; RL J. Med. Virol. 64(3):245-255(2001). XX DR MD5; 03c0e68d5639135d6e7726e1830d8548. DR EuropePMC; PMC2832772; 20100346. XX FH Key Location/Qualifiers FH FT source 1..2377 FT /organism="Human astrovirus 1" FT /isolate="S1 standard" FT /serotype="1" FT /mol_type="genomic RNA" FT /note="synonym: Human astrovirus type 1" FT /db_xref="taxon:12456" FT CDS 12..2375 FT /codon_start=1 FT /product="outer capsid protein" FT /db_xref="GOA:Q14V24" FT /db_xref="InterPro:IPR004337" FT /db_xref="InterPro:IPR022027" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q14V24" FT /protein_id="BAE97445.1" FT /translation="MASKSNKQVTVEVSNNGRNRSKSRARSQSRGRDKSVKIQVKSRNK FT DRRQAGRDKRQSSQRVRNIVNKQLRKQGVTGPKPAICQRATATLGTVGSNTSGTTEIEA FT CILLNPVLVKDATGSTQFGPVQALGAQYSMWKLKYLNVKLTSMVGASAVNGTVSGVSLN FT PTTTPSSTSWSGLGARKHLDVTVGKNATFNLKPSDLGGPRDGWWLTNTKDNASDPLGPS FT IEIPTLGRTMSSYKNEQFTGGLFLVELASEWCFTGYAANPNLVNLVKSTDNQVPVTFEG FT SAGSPLIMNVPEGSHFARTVLARSTTPTTLARAGERTTSDTVWQVLNTAVSAAELVTPP FT PFNWLVKGGWWFVKLIAGRTRTGSRSFYVYPSYQDALSNKPALCTGSTPGGMRTRNPVT FT TTLQFTQMNQPSLGHGEAPAAFGRSIPAPGEEFKVVLTFGSPMSPNANNKHTWVNKPLD FT APSGNYNVKIAKDVDHYLTMQGFTSIASVDWYTMDFQPSEAPAPIQGLQVLVNISKKAD FT VYAVKQFVTGQTNNKHQVTSLFLVKVTTGFQVNNYLSYFYRASATGDATTNLLVRGDTY FT TAGISFTQGGWYLLPNTSIVDGAIPPGWVWNNVELKTNTAYHMDKGLVHSIMPLPESTQ FT MCYEMLTSIPRSRASGHGYESDNTEYLDAPDSADQFIEDIETDTDIESTEDEDVEADRF FT DIIDTSDEEDGNETDRVTLLSTLVNQGMTMTRATRIARRAFPTLSDRIKRGVYMDLLVS FT GASPGNAWSHACEEARKAAGEINPCTSGSRGHAE" XX SQ Sequence 2377 BP; 686 A; 564 C; 575 G; 552 T; 0 other; aaagaagtgt gatggctagc aagtccaata agcaggtgac tgttgaggtc agtaataatg 60 gccgcaacag gagtaaatca agggcccgtt cacaatctag gggccgagac aaatcagtca 120 agatacaagt caaatcaaga aacaaggaca gaagacaagc cggacgcgac aaacgtcaat 180 cttctcaacg tgtccgtaac attgtcaata agcaactcag gaaacagggt gtcacaggac 240 caaaacctgc aatatgtcag agagcaacag caacccttgg gacggtcggg tcaaacacca 300 gtggcaccac tgagattgag gcgtgtattc tcctcaaccc tgtcctcgtt aaggacgcta 360 ctggaagcac tcagtttggc cctgtgcagg cgctaggtgc acagtattcc atgtggaagc 420 tgaagtattt gaatgtcaaa ttaacctcta tggttggtgc atctgctgtt aatggtactg 480 tctcaggggt ctcacttaac cccactacta cgccatcttc tactagttgg tcaggattag 540 gtgcacgtaa acatcttgat gttacggttg gtaagaatgc aacatttaat ctgaaacctt 600 ctgaccttgg tggacctagg gatggctggt ggctcacaaa caccaaggac aatgcatctg 660 accccctggg accctccatt gaaataccca cactcggacg aacaatgtcc tcatacaaga 720 atgagcagtt tacagggggg ctatttttgg ttgaacttgc ttcagagtgg tgctttacag 780 gttatgctgc caacccaaac cttgttaatt tggtcaagtc aacagataat caagtacctg 840 tgacatttga aggaagtgca ggatcaccat taataatgaa tgtgccagag gggagccatt 900 ttgcacgaac agttcttgca cgctcaacaa caccaaccac tctagcgcgt gcaggagaga 960 gaaccacctc agacacagta tggcaggtgc tcaatacagc tgtatctgct gctgagcttg 1020 tcacgcctcc tccgttcaat tggttagtta aaggaggttg gtggtttgtg aaacttattg 1080 ccgggagaac cagaactggc tctcgtagct tctatgtgta tcccagctac caagatgctt 1140 tgtccaataa gccagcactc tgcaccggca gcactccagg aggcatgagg acgcggaatc 1200 ctgtgacaac aaccctacag ttcacacaaa tgaaccaacc tagtctaggg cacggtgaag 1260 caccagctgc gtttggtaga tccattccag cacctggtga ggagtttaaa gttgtcctca 1320 catttggatc cccaatgagc cctaatgcaa ataacaaaca cacttgggtt aataaacctc 1380 ttgatgcgcc ttcgggcaat tacaatgtga aaattgcaaa ggatgttgac cactatctaa 1440 ccatgcaggg tttcacttct atagcatctg ttgactggta cactatggat tttcaaccat 1500 ctgaggcgcc tgccccgata caaggcctgc aggtacttgt gaacatctcg aaaaaagctg 1560 atgtgtatgc cgtcaaacaa tttgtcacag ggcagaccaa caacaagcac caggttacaa 1620 gcctgttcct agtaaaagta acaactggtt ttcaggtgaa caactacctg agttactttt 1680 acagggcgtc tgccactggg gatgccacaa ctaacctgtt ggttagagga gacacataca 1740 cagcagggat aagttttacc cagggtggat ggtatttgtt gccaaataca tctattgttg 1800 atggggctat cccacctggt tgggtctgga ataacgtgga acttaaaact aacacagcgt 1860 atcacatgga caaaggcttg gtccattcaa taatgccttt gcctgagtcc acgcaaatgt 1920 gttatgagat gctgacatct attccacgtt ccagggcatc tggtcatggt tatgagagtg 1980 acaacaccga atacttggat gctccagact ctgctgacca gtttatagaa gacatagaga 2040 cagacacaga cattgagagt acagaggacg aagacgtcga agcggacagg tttgatatca 2100 tagacacttc tgatgaagaa gatggaaatg agacagaccg tgtaaccctc ctctcaactc 2160 tcgtaaatca aggaatgaca atgacgcgtg ccacaaggat agcacggcgc gcattcccca 2220 cgctttccga taggatcaag cgtggagtat acatggacct gcttgtctcg ggggcaagcc 2280 caggcaatgc atggtcccat gcgtgtgaag aagcacgcaa agcagcaggg gaaatcaatc 2340 cctgcacatc tggaagccgc ggccacgccg agtagga 2377 // ID AB000284; SV 1; linear; genomic RNA; STD; VRL; 2377 BP. XX AC AB000284; XX DT 07-JUL-2006 (Rel. 88, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 2) XX DE Human astrovirus 1 gene for outer capsid protein, complete cds, isolate: DE JAPAS 1526. XX KW . XX OS Human astrovirus 1 OC Viruses; Riboviria; Astroviridae; Mamastrovirus. XX RN [1] RP 1-2377 RA Ushijima H., Kakizawa J., Leying W.; RT ; RL Submitted (08-JAN-1997) to the INSDC. RL Hiroshi Ushijima, Aino University, Aino Health Research Center; Shibuya RL Toho Building 4F, 2-17-3 Shibuya, Shibuya-ku, Tokyo 150-0002, Japan RL (E-mail:ushijima-hiroshi@jcom.home.ne.jp, Tel:81-3-3486-8481, RL Fax:81-3-3486-8481) XX RN [2] RX DOI; 10.1002/jmv.1043. RX PUBMED; 11424111. RA Wang Q.H., Kakizawa J., Wen L.Y., Shimizu M., Nishio O., Fang Z.Y., RA Ushijima H.; RT "Genetic analysis of the capsid region of astroviruses"; RL J. Med. Virol. 64(3):245-255(2001). XX DR MD5; 3ffb7043bddde50a08146e02efbb11c8. DR EuropePMC; PMC2832772; 20100346. XX FH Key Location/Qualifiers FH FT source 1..2377 FT /organism="Human astrovirus 1" FT /isolate="JAPAS 1526" FT /serotype="1" FT /mol_type="genomic RNA" FT /note="synonym: Human astrovirus type 1" FT /db_xref="taxon:12456" FT CDS 12..2375 FT /codon_start=1 FT /product="outer capsid protein" FT /db_xref="GOA:Q14V23" FT /db_xref="InterPro:IPR004337" FT /db_xref="InterPro:IPR022027" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q14V23" FT /protein_id="BAE97446.1" FT /translation="MASKSNNKLTVVVSNNGPNRSKSRARSQSGGRDKSVKITVNSRNR FT ARRQPGRDKRQSSQRVRNIVNKQLRKQGVTGPKPAICQRATATLGTVGSNTSGTTEIEA FT CILLNPVLVKDATGSTQFGPVQALGAQYSMWKLKYLNVKLTSMVGASAVNGTVSGVSLN FT PTSTPSSTSWSGLGARKHLDVTVGKNATFKLKPSDLGGPRDGWWLTNTNDNASDTLGPS FT IEIPTLGRTMSSYKNEQFPGGLFLVELASEWCFTGYAANPNLVNLVKSTDNQVSVTFEG FT SAGSPLIMNVPEGSHFARTVLARSTTPTTLARAGERTTSDTVWQVLNTAVSAAELVTPP FT PFNWLVKGGWWFVKLIAGRNRTGSRSFYVYPSYQDALSNKPALCTGSTPGGMRTRNPVT FT TTLQFTQMNQPSLGHGEAPAAFGRSIPAPGEEFKVVLTFGAPMSPNANNKQTWVNKPLD FT APSGYYPVKIAKDVDHYLTMQGFTSIASVDWYPIDFHPSEAPAPIQGLQVLVNSSTNAD FT VYAIKQFVTAQTNNKHQVTGLFLVKVTTGFQVNNYLSYFYRASATGDATTNLLVRGDTY FT TGGLSLTQGGWYLLTNTSIVVGAMPPGWVWDNLELKTNTAYPMGPGLVQIIIPFPESPH FT ICYEMLTSIPPSRASGHGYESDNTEYLDAPDSPVQFIEDIETDTDIESTEDEDDEADRF FT DIIDTSDEEDENETDRATLLSTLVNQGMTMTRATRIARRAFPTLSDRIKRGVYMDLLVS FT GASPGNAWSHACEEARKAAGEINPCTSGSRGHAE" XX SQ Sequence 2377 BP; 665 A; 591 C; 569 G; 552 T; 0 other; aaagaagtgt gatggctagc aagtccaaca acaagttgac tgttgtggtg agtaataatg 60 gccccaacag gagtaaatca agggcccgtt cacaatctgg gggccgagac aaatcagtca 120 agatcacagt caattcaaga aacagagcca ggagacagcc cggacgcgac aaacgtcaat 180 cttctcaacg tgtccgtaac attgtcaata agcaactcag gaaacagggt gtcacaggac 240 ccaaacctgc aatatgtcag agagcaacag caacccttgg gacagtcggg tcaaacacca 300 gtggcaccac tgagattgag gcgtgtattc tcctcaaccc tgtcctcgtt aaggacgcta 360 ctggaagcac tcagtttggc cctgtgcagg cgctaggtgc acagtattcc atgtggaagt 420 tgaagtactt gaatgtcaaa ttgacttcta tggttggtgc atctgctgtt aatggtactg 480 tctcaggggt ctcacttaac cccacatcta ctccatcttc tactagttgg tcaggattag 540 gtgcacgtaa acatcttgat gttacggttg gtaagaatgc aacatttaaa ttgaaacctt 600 ctgaccttgg tggacctagg gatggttggt ggctcacaaa caccaacgac aatgcatctg 660 acaccctggg accctccatt gaaataccta cactcggacg aacaatgtcc tcatacaaga 720 atgagcagtt cccaggaggg ctatttttgg ttgaacttgc ttcagagtgg tgctttacag 780 gttatgctgc caacccaaac cttgttaact tggtcaaatc aacagataat caagtatctg 840 tgacatttga aggaagtgct ggatcaccat taataatgaa cgtgccagag gggagccatt 900 ttgcacgaac agttcttgca cgctcaacaa cacccaccac tctagcgcgt gcaggagaga 960 gaaccacctc agacacagta tggcaggtgc tcaatacagc tgtatctgct gctgagcttg 1020 tcacgcctcc tccattcaat tggttagtta agggaggttg gtggtttgtg aaacttattg 1080 ccgggagaaa cagaactggc tctcgcagct tctatgtgta tcccagctac caagatgctt 1140 tgtccaacaa gccagcactc tgcaccggca gcactccagg aggcatgagg acgcggaatc 1200 ctgtgacaac caccctacaa ttcacacaga tgaaccaacc tagtctaggg cacggtgaag 1260 caccagctgc gtttggtaga tccattccag cacctggtga ggagtttaaa gtcgtcctca 1320 catttggagc cccaatgagc cctaatgcaa ataacaaaca gacttgggtt aataaacctc 1380 ttgatgcgcc ttcgggctat taccctgtga agattgccaa ggatgttgac cactatctaa 1440 ccatgcaggg tttcacttct atagcttctg tagactggta ccccatagat tttcacccat 1500 ctgaggcccc tgccccaata caaggcctgc aggtacttgt gaacagctcg acaaatgctg 1560 atgtgtatgc catcaaacaa tttgttacag cgcagactaa caacaagcac caggttacag 1620 gcctgttcct agtaaaagtg acgactggtt ttcaggtgaa caactacctg agttactttt 1680 acagggcgtc tgccactggg gatgccacaa ctaacctgtt ggttagggga gacacataca 1740 caggagggtt aagtctcacc cagggtggat ggtatttgtt gacaaataca tctattgttg 1800 ttggggctat gccccctggt tgggtctggg ataacctgga acttaaaact aacacagctt 1860 atcccatggg cccaggcctg gtccaaataa taattccctt tcctgagtcc ccccacattt 1920 gttatgagat gctgacatct atacccccct ccagggcatc tggtcatggt tatgagagtg 1980 acaacaccga atacttggat gctccagact ctcctgtcca gtttatagaa gacatagaga 2040 cagacacaga cattgagagt acagaggacg aagacgatga agcggacagg tttgacatca 2100 tagacacttc tgatgaagaa gatgaaaatg agacagaccg tgcaaccctc ctctcaactc 2160 tcgtaaacca aggaatgaca atgacgcgtg ccacaaggat agcaaggcgc gcattcccca 2220 cgctttccga taggatcaag cgtggagtat acatggacct gcttgtctcg ggggcaagcc 2280 caggcaatgc atggtcccat gcgtgtgaag aagcacgcaa agcagcaggg gaaatcaatc 2340 cctgcacatc tggaagccgc ggccacgccg agtagga 2377 // ID AB000285; SV 1; linear; genomic RNA; STD; VRL; 2377 BP. XX AC AB000285; XX DT 07-JUL-2006 (Rel. 88, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 2) XX DE Human astrovirus 1 gene for outer capsid protein, complete cds, isolate: DE P437/91. XX KW . XX OS Human astrovirus 1 OC Viruses; Riboviria; Astroviridae; Mamastrovirus. XX RN [1] RP 1-2377 RA Ushijima H., Kakizawa J., Leying W.; RT ; RL Submitted (08-JAN-1997) to the INSDC. RL Hiroshi Ushijima, Aino University, Aino Health Research Center; Shibuya RL Toho Building 4F, 2-17-3 Shibuya, Shibuya-ku, Tokyo 150-0002, Japan RL (E-mail:ushijima-hiroshi@jcom.home.ne.jp, Tel:81-3-3486-8481, RL Fax:81-3-3486-8481) XX RN [2] RX DOI; 10.1002/jmv.1043. RX PUBMED; 11424111. RA Wang Q.H., Kakizawa J., Wen L.Y., Shimizu M., Nishio O., Fang Z.Y., RA Ushijima H.; RT "Genetic analysis of the capsid region of astroviruses"; RL J. Med. Virol. 64(3):245-255(2001). XX DR MD5; 58c2285ec0492b5fb75d50fe45eb814f. DR EuropePMC; PMC2832772; 20100346. XX FH Key Location/Qualifiers FH FT source 1..2377 FT /organism="Human astrovirus 1" FT /isolate="P437/91" FT /serotype="1" FT /mol_type="genomic RNA" FT /note="synonym: Human astrovirus type 1" FT /db_xref="taxon:12456" FT CDS 12..2375 FT /codon_start=1 FT /product="outer capsid protein" FT /db_xref="GOA:Q14V22" FT /db_xref="InterPro:IPR004337" FT /db_xref="InterPro:IPR022027" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q14V22" FT /protein_id="BAE97447.1" FT /translation="MASKSNKQVTVEVSNNGRNRSKSRARSQSRGRDRAVKITVNSKNR FT TRRQPGRGKHQSSQRVRNIVNKQLRKQGVTGPKPAICQRATATLGTVGSNTSGTTEIEA FT CILLNPVLVKDATGSTQFGPVQALGAQYSMWKLKYLNVKLTSMVGASAVNGTVLRVQFG FT PTSTPSSTSWSGLGARKHLDVTVGKNATFKLKPSDLGGPRDGWWLTNTNDNASDTLGPS FT IEIHTLGRTMSSYKNEQFTGGLFLVELASEWCFTGYAANPNLVNLVKSTDKQVSVTFEG FT SAGSPLIMNVPEGSHFARTVLARSTTPTTLARAGERTTSDTVWQVLNTAVSAAELVTPP FT PFNWLVKGGWWFVKLIAGRTWTGTRSFYVYPSYQDALSNKPALCTGSTPGGMRTRNPVT FT TTLQFTQMNQPSLGHGEAPAAFGRSIPTPGEEFKVILTFAAPMSPNANNKQNWVNKPLD FT APSGHYNVKIAKDVDHYLTMQGFTSIASVDWYTIDFQPSEAPAPIQGLQVLVNSSKKAD FT VYAVKQFVTAQTNNKHQVTTLFLVKVTTGFQVNNYLSYFYRASATGDATTNLLVRGDTY FT TAGISFTQGGWYLLTNTSIVDGALPPGWIWNNVELKTNTAYHMDKGLIHQIMPLPESTQ FT MCYEMLTSIPRSRAAGYGYESDNTEYLDAPDFADQLREDIETDTDIESTEDEDDEADRF FT DIIDTSDEEDENETDRVTLLSTLVNQGMTMTRATRIARRAFPTLTDRIKRGVYMDLLVS FT GATPNSAWSHACEEARKTAGEINPCTSGSRGHAE" XX SQ Sequence 2377 BP; 696 A; 567 C; 571 G; 543 T; 0 other; aaagaagtgt gatggctagc aagtccaata agcaggtaac tgttgaggtc agtaacaatg 60 gccgcaacag gagtaaatca agggcccgct cacaatctag agggcgggac agagcagtta 120 aaatcacagt taattcaaaa aacaggacca gaagacagcc cggacgcggc aaacatcaat 180 cttctcaacg tgtccgtaac attgtcaata agcaactcag gaaacaaggt gtcacaggac 240 caaaacctgc aatatgtcag agagcaacag caacccttgg gacggtcggg tcaaacacca 300 gcggcaccac tgagattgag gcgtgtattc tcctcaaccc tgtccttgtt aaggacgcta 360 ctgggagcac tcagtttggc cccgtgcagg cgttaggtgc acagtattcc atgtggaagc 420 tgaagtacct gaatgtcaag ttaacctcta tggttggtgc atctgctgtc aatggtactg 480 tcctcagagt tcagtttggc cccacatcta caccatcgtc cactagttgg tcaggattgg 540 gtgcacgtaa gcaccttgat gttacggttg gtaagaatgc aacatttaaa ttgaaacctt 600 ctgaccttgg tggacctagg gatggctggt ggcttacaaa caccaacgac aatgcatctg 660 acaccctggg gccctccatt gaaatacata cacttggacg aacaatgtcc tcatataaga 720 atgagcagtt tacagggggg ctatttttgg ttgaacttgc ttcagagtgg tgctttacag 780 gttatgctgc caacccaaac cttgttaatc tggtcaagtc aacagataag caagtatctg 840 tgacatttga aggtagtgct ggatcaccat taataatgaa tgtgccagag gggagccatt 900 ttgcccgaac agttcttgcg cgctcaacaa cacccaccac tctagcgcgt gcaggtgaaa 960 gaaccacttc agacacagta tggcaggtgc tcaatacagc tgtatctgct gctgagcttg 1020 tcacacctcc gccgttcaac tggttagtca aaggaggttg gtggtttgta aaacttattg 1080 ctgggaggac atggactggc acccgtagct tttatgtata tcccagctac caagatgctt 1140 tgtccaataa gccagcactc tgcactggca gcactccagg aggcatgagg acgcggaatc 1200 ctgtgacaac aaccctacag tttacacaaa tgaatcaacc tagtctggga cacggtgaag 1260 caccagctgc gtttgggaga tccattccaa cacctggcga ggagtttaaa gttattctca 1320 catttgcagc cccaatgagc cctaatgcaa acaacaaaca aaattgggtt aataaacctc 1380 ttgatgcgcc ttcgggccat tacaatgtta agattgccaa ggatgttgat cactatctaa 1440 ccatgcaggg ttttacttcc atagcatctg ttgattggta caccatagat tttcaaccat 1500 ccgaggcgcc tgcccccata caaggcctgc aggtacttgt gaatagctct aagaaagctg 1560 atgtgtatgc agtcaaacaa tttgttacag cgcagacaaa caacaagcac caggttacaa 1620 ccctgttcct agtaaaggta acaactggat tccaggtgaa caattaccta agctactttt 1680 acagggcgtc tgctactgga gatgctacaa ctaacttgtt ggttagagga gacacataca 1740 cagcagggat cagcttcacc cagggtggat ggtatttgct gacaaataca tccattgttg 1800 atggggcatt gccacctggc tggatctgga ataacgtgga gcttaaaact aacacagcat 1860 accacatgga caaaggcctg attcaccaaa taatgccctt gcctgagtcc acacaaatgt 1920 gctatgagat gctgacatct attccacgct ccagggcagc tggctatggt tatgagagtg 1980 acaacactga atacttggat gctccagact ttgctgacca gctcagagaa gacatagaga 2040 cagacacaga catcgagagt acagaggacg aagacgatga agcggacagg tttgatatca 2100 tagacacttc tgatgaagaa gatgaaaatg agacagaccg tgtaaccctc ctctcaactc 2160 tcgtaaacca aggaatgaca atgacgcgtg ctacaaggat agcaaggcgc gcattcccca 2220 cgcttacaga taggatcaag cgtggagtat acatggacct gcttgtttcg ggggcaaccc 2280 caaacagtgc atggtctcat gcgtgtgaag aagcacgcaa aacagcaggg gaaatcaatc 2340 cctgcacatc tggaagccgc ggccacgccg agtagga 2377 // ID AB000286; SV 1; linear; genomic RNA; STD; VRL; 2377 BP. XX AC AB000286; XX DT 07-JUL-2006 (Rel. 88, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 2) XX DE Human astrovirus 1 gene for outer capsid protein, complete cds, isolate: DE 816/93. XX KW . XX OS Human astrovirus 1 OC Viruses; Riboviria; Astroviridae; Mamastrovirus. XX RN [1] RP 1-2377 RA Ushijima H., Kakizawa J., Leying W.; RT ; RL Submitted (08-JAN-1997) to the INSDC. RL Hiroshi Ushijima, Aino University, Aino Health Research Center; Shibuya RL Toho Building 4F, 2-17-3 Shibuya, Shibuya-ku, Tokyo 150-0002, Japan RL (E-mail:ushijima-hiroshi@jcom.home.ne.jp, Tel:81-3-3486-8481, RL Fax:81-3-3486-8481) XX RN [2] RX DOI; 10.1002/jmv.1043. RX PUBMED; 11424111. RA Wang Q.H., Kakizawa J., Wen L.Y., Shimizu M., Nishio O., Fang Z.Y., RA Ushijima H.; RT "Genetic analysis of the capsid region of astroviruses"; RL J. Med. Virol. 64(3):245-255(2001). XX DR MD5; f57a71468d3516ee6e3b8272426a2e80. DR EuropePMC; PMC2832772; 20100346. XX FH Key Location/Qualifiers FH FT source 1..2377 FT /organism="Human astrovirus 1" FT /isolate="816/93" FT /serotype="1" FT /mol_type="genomic RNA" FT /note="synonym: Human astrovirus type 1" FT /db_xref="taxon:12456" FT CDS 12..2375 FT /codon_start=1 FT /product="outer capsid protein" FT /db_xref="GOA:Q14V21" FT /db_xref="InterPro:IPR004337" FT /db_xref="InterPro:IPR022027" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q14V21" FT /protein_id="BAE97448.1" FT /translation="MASKSNKQVTVEVSNNGRNRSKSRARSQSRGRDRAVKITVNSKNR FT TRRQSGRGKHQSSQRVRNIVNKQLRKQGVTGPKPAICQRATATLGTVGSNTSGTTEIEA FT CILLNPVLVKDATGSTQFGPVQALGAQYSMWKLKYLNVKLTSMVGASAVNGTVLRVSLN FT PTSTPSSTSWSGLGARKHLDVTAGKNATFKLKPSDLGGPRDGWWLTNTNDNASDTLGPS FT MEIHTLGRTMSSYKNDQFTGGLFLVELASEWCFTGYAADPNLVNLVKSTDKQVSVTFEG FT NAGSPLIMNVPEGSHFARTVLARSTTPTTLARAGERTTSDTVWQVLNTAVSAAELVTPP FT PFNWLVKGGWWFVKLIAGRTRTGTRSFYVYPSYQDALSNKPALCTGSTPGGMRTRNPVT FT TTLQFTQMNQPSLGHGEAPAAFGRSIPTPGEEFKVILTFGAPMSPNANNKQNWVNKPLD FT APSGHYNVKIAKDVDHYLTMQGFTSIASVDWYTTDFQPSEAPAPIQGLQVLVNSSKKAD FT VYAVKQFVTAQTNNKHQVTTLFLVKVTTGFQVNNYLSYFYRASASGDATTNLLVRGDTY FT TAGISFTQGGWYLLTNTSIVDGALPPGWIWNNVELKTNTAYHMDKGLIHLIMPLPESRQ FT MCYEMLTSIPRSRAAGYGYESDNTEYLDAPDFADQIREDIETDTDIETTEDEDDEADRF FT DIIDTSDEEDENETDRVTLLSTLVSQGMTMTRATRIARRAFPTLTDRIKRGVYMDLLVS FT GASPNSAWSHACEEARKAAGEINPCTSGSRGHAE" XX SQ Sequence 2377 BP; 696 A; 572 C; 572 G; 537 T; 0 other; aaagaagtgt gatggctagc aagtccaata agcaggtaac tgttgaggtc agtaacaatg 60 gccgcaacag gagtaaatca agggcccgct cacaatctag agggcgggac agagcagtta 120 aaatcacagt caattcaaaa aacaggacta gaagacagtc cggacgcggc aaacatcaat 180 cttctcaacg tgtccgtaac attgtcaata agcaactcag gaaacaaggt gtcacaggac 240 caaaacctgc aatatgtcag agggcaacag caacccttgg gacggtcggg tcaaacacca 300 gcggcaccac tgagattgag gcgtgtattc tcctcaaccc tgtccttgtt aaggacgcta 360 ctgggagcac tcagtttggc cccgtgcagg cgttaggtgc acagtattcc atgtggaagc 420 tgaagtacct gaatgtcaag ttaacctcta tggttggtgc atctgctgtc aatggtactg 480 tcctcagagt ttcacttaac cccacatcta caccatcgtc cactagttgg tccggattgg 540 gtgcacgtaa gcaccttgat gttacggctg gtaagaatgc aacatttaaa ttgaaacctt 600 ctgaccttgg tggacctagg gatggttggt ggctcacaaa caccaacgac aatgcatctg 660 acaccttggg gccctccatg gaaatacaca cacttggacg aacaatgtcc tcatataaga 720 atgaccagtt cacagggggg ctatttttgg ttgaacttgc ttcagagtgg tgctttacag 780 gttatgctgc tgacccaaac cttgttaact tggtcaagtc aacagataaa caagtatctg 840 tgacatttga aggtaatgcg ggatcgccat taataatgaa tgtgccagag gggagccatt 900 ttgcccgaac agttcttgca cgctcaacaa cacccaccac tctagcgcgt gcaggtgaaa 960 ggaccacttc agacacagta tggcaggtgc tcaatacagc tgtatctgct gctgagcttg 1020 tcacacctcc gcctttcaat tggttagtta aaggaggttg gtggtttgta aaacttattg 1080 ctgggagaac tagaactggc acccgtagct tttatgtata tcccagctac caagatgctt 1140 tgtccaacaa gccagcactc tgcactggca gcactccagg aggcatgagg acccggaatc 1200 ctgtgacaac aaccctacag ttcacacaaa tgaaccaacc tagtctggga catggtgaag 1260 caccagctgc gtttgggaga tccattccaa cacccgggga ggagtttaaa gttattctca 1320 catttggagc cccaatgagc cctaatgcaa acaacaaaca aaactgggtc aataaacctc 1380 ttgatgcgcc ttcgggccat tacaatgtta aaattgccaa ggatgttgat cactatctaa 1440 ccatgcaggg ttttacttct atagcatctg ttgactggta caccacagat ttccaaccat 1500 ccgaggcgcc tgcccccata caaggcctgc aggtacttgt gaatagctct aagaaagctg 1560 atgtgtatgc agtcaaacaa tttgttacag cgcagacaaa caacaagcac caggttacaa 1620 ccctgtttct agtaaaggta acaactggat tccaggtgaa caactacctg agctactttt 1680 acagggcgtc tgccagtgga gatgctacaa ctaacttgtt ggttagagga gatacataca 1740 cagcagggat aagcttcacc cagggtggat ggtatttgtt gacaaataca tccattgttg 1800 acggggcgtt gccacctggt tggatctgga ataacgtgga acttaaaacc aacacagcat 1860 accacatgga caaaggcctg atccacttaa taatgccttt gcctgagtcc agacaaatgt 1920 gctatgagat gctgacatct attccacgct ccagggcggc tggctatggc tatgagagtg 1980 ataacactga atacttggat gctccagact ttgctgacca gatcagagaa gacatagaga 2040 cagacacaga catcgagact acagaggacg aagacgacga agcggacagg tttgatatca 2100 tagacacttc tgatgaagaa gatgaaaatg agacagaccg tgtaaccctc ctctcaactc 2160 tcgtaagcca aggaatgaca atgacgcgtg ccacaaggat agcaaggcgc gcattcccca 2220 cgctcacaga taggatcaag cgtggagtat acatggacct gcttgtttca ggggcaagcc 2280 ctaacagtgc atggtctcat gcgtgtgaag aagcacgcaa agcagcaggg gaaatcaatc 2340 cctgcacatc tggaagccgc ggccacgccg agtagga 2377 // ID AB000287; SV 1; linear; genomic RNA; STD; VRL; 2377 BP. XX AC AB000287; XX DT 07-JUL-2006 (Rel. 88, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 2) XX DE Human astrovirus 1 gene for outer capsid protein, complete cds, isolate: DE JAPAS 115. XX KW . XX OS Human astrovirus 1 OC Viruses; Riboviria; Astroviridae; Mamastrovirus. XX RN [1] RP 1-2377 RA Ushijima H., Kakizawa J., Leying W.; RT ; RL Submitted (08-JAN-1997) to the INSDC. RL Hiroshi Ushijima, Aino University, Aino Health Research Center; Shibuya RL Toho Building 4F, 2-17-3 Shibuya, Shibuya-ku, Tokyo 150-0002, Japan RL (E-mail:ushijima-hiroshi@jcom.home.ne.jp, Tel:81-3-3486-8481, RL Fax:81-3-3486-8481) XX RN [2] RX DOI; 10.1002/jmv.1043. RX PUBMED; 11424111. RA Wang Q.H., Kakizawa J., Wen L.Y., Shimizu M., Nishio O., Fang Z.Y., RA Ushijima H.; RT "Genetic analysis of the capsid region of astroviruses"; RL J. Med. Virol. 64(3):245-255(2001). XX DR MD5; 3820457902d577ee6d73e5bffb3ac993. DR EuropePMC; PMC2832772; 20100346. XX FH Key Location/Qualifiers FH FT source 1..2377 FT /organism="Human astrovirus 1" FT /isolate="JAPAS 115" FT /serotype="1" FT /mol_type="genomic RNA" FT /note="synonym: Human astrovirus type 1" FT /db_xref="taxon:12456" FT CDS 12..2375 FT /codon_start=1 FT /product="outer capsid protein" FT /db_xref="GOA:Q14V20" FT /db_xref="InterPro:IPR004337" FT /db_xref="InterPro:IPR022027" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q14V20" FT /protein_id="BAE97449.1" FT /translation="MASKSNKQVTVEVSNNGRNRSKSRARSQSRGRDKSIKVAANSRNR FT ARRQPGRDKRQSSQRVRNIVNKQLRKQGVTGPKPAICQRATATLGTVGSNTSGTTEIEA FT CILLNPVLVKDATGSTQFGPVQALGAQYSMWKLKYLNVKLTSMVGASAVNGTVSGVSLN FT PTSTPSSTSWSGLGARKHLDVTVGKNATFKLKPSDLGGPRDGWWLTNTNDNASDTLGPS FT IEIHTLGRTMSSYKNEQFTGGLFLVELASEWCFTGYAANPNLVNLVKSTDNQVSVTFEG FT SAGSPLIMNVPEGSHFARTVLARSTTPTTLARAGERTTSDTVWQVLNTGVSAAELVTPP FT PFNWLVKGGWWFVKLIAGRTRTGSRSFYVYPSYQDALSNKPALCTGSTPGGMRTRNPVT FT TTLQITQMNQPSLGHGEAPAAFGRSIPAPGEEFKVVLTFGTPMSPNANNKQTWVNKPLD FT APSATSHVQTAKDVDPYLTLPGFPSIASVDWYPIDFQPSEAPAPIPGLQVLVNSSKKAD FT VYAIKQFVTAQTNNKHQVTSLFLVKVTTGFQVNNYLSYFYRPSAAGDTTTNLLVRGDTY FT TAGISFTQGGWYLLTNTSIVDGAMPPGWVWNNVELKTNTAYHMDKGLVHLIMPLPESTQ FT MCYEMLTSIPRSRASGHGYESDNTEYLDAPDSADQFKEDIETDTDIESTEDEDDEADRF FT DIIDTSPEEDENETDRVTLLSTLVNQGMTMTRATRIARRAFPTLSDRIKRGVYMDLLVS FT GASPGNAWSHACEEARKAAGEINPCTSGSRGHAE" XX SQ Sequence 2377 BP; 682 A; 584 C; 567 G; 544 T; 0 other; aaagaagtgt gatggctagc aagtccaaca agcaagtaac tgttgaggtc agtaataatg 60 gccgcaacag gagtaaatca agggcccgtt cacaatctag gggccgagat aaatcaatca 120 aggtcgcagc caattcaaga aacagagcca ggagacagcc cggacgcgac aaacgtcaat 180 cttctcaacg tgtccgtaac attgtcaata agcaactcag gaaacagggt gtcacaggac 240 caaaacctgc aatatgtcag agagcaacag caacccttgg gacagtcggg tcaaacacca 300 gtggcaccac tgagattgag gcgtgtattc tcctcaaccc tgtcctcgtt aaggacgcta 360 ctggaagcac tcagtttggc cctgtgcagg cgctaggtgc acagtattcc atgtggaagt 420 tgaagtattt gaatgtcaaa ttgacctcta tggttggtgc atctgctgtt aatggtactg 480 tctcaggggt ctcacttaac cccacatcta ctccatcttc tactagttgg tcaggattag 540 gtgcacgtaa acatcttgat gttacggttg gtaagaatgc aacatttaaa ttgaaacctt 600 ctgaccttgg tggacctagg gatggctggt ggctcacaaa caccaacgac aatgcatctg 660 acaccctggg accctccatt gaaatacata cactcggacg aacaatgtcc tcatacaaga 720 atgagcagtt cacaggaggg ctatttttgg ttgaacttgc ttcagagtgg tgctttacag 780 ggtatgctgc caacccaaac cttgttaact tggtcaaatc aacagataat caagtatctg 840 tgacatttga aggaagtgct ggatcaccat taataatgaa cgtgccagag gggagccatt 900 ttgcacgaac agttcttgca cgctcaacaa cacccaccac tctagcgcgt gcaggagaga 960 gaaccacctc agacacagta tggcaggtgc tcaatacagg tgtatctgct gctgagcttg 1020 tcacgcctcc tccattcaat tggttagtta agggaggttg gtggtttgtg aaacttattg 1080 ccgggagaac cagaactggc tctcgcagct tctatgtgta tcccagctac caagatgctt 1140 tgtccaacaa gccagcactc tgcacaggca gcactccagg aggcatgagg acgcggaatc 1200 ctgtgacaac caccctacaa atcacacaga tgaaccaacc tagtctaggg cacggtgaag 1260 caccagctgc gtttggtaga tccattccag cacctggtga ggagtttaaa gtcgtcctca 1320 catttggaac cccaatgagc cctaatgcaa ataacaaaca gacttgggtt aataaacctc 1380 ttgatgcgcc ttccgccact tcacatgtgc agactgccaa ggatgttgac ccctatctaa 1440 ccctgccggg tttcccttct atagcttctg ttgactggta ccccatagat tttcaaccat 1500 ctgaggcccc tgccccaata ccaggcctgc aggtacttgt gaacagctcg aaaaaagctg 1560 atgtgtatgc catcaaacaa tttgttacag cgcagactaa caacaagcac caggttacaa 1620 gcctgttcct agtaaaagtg acaactggtt ttcaggtgaa caactacctg agttactttt 1680 acaggccgtc tgccgctggg gataccacaa ctaacctgtt ggttagagga gacacataca 1740 cagcagggat aagttttacc cagggcggat ggtatttgtt gacaaataca tctattgttg 1800 atggggctat gccacctggt tgggtctgga ataacgtgga acttaaaact aacacagcat 1860 atcacatgga caaaggcttg gtccatttaa taatgccttt gcctgagtcc acgcaaatgt 1920 gttatgagat gctgacatct attccacgct ccagggcatc tggtcatggt tatgagagtg 1980 acaacaccga atacttggat gctccagact ctgctgacca gtttaaagaa gacatagaga 2040 cagacacaga cattgagagt acagaggacg aagacgatga agcggacagg tttgacatca 2100 tagacacttc tcctgaagaa gatgaaaatg agacagaccg tgtaaccctc ctctcaactc 2160 tcgtaaacca aggaatgaca atgacgcgtg ccacaaggat agcaaggcgc gcattcccca 2220 cgctttccga taggatcaag cgtggagtat acatggacct gcttgtctcg ggggcaagcc 2280 caggcaatgc atggtcccat gcgtgtgaag aagcacgcaa agcagcaggg gaaatcaatc 2340 cctgcacatc tggaagccgc ggccacgccg agtagga 2377 // ID AB000288; SV 1; linear; genomic RNA; STD; VRL; 2404 BP. XX AC AB000288; XX DT 07-JUL-2006 (Rel. 88, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 2) XX DE Human astrovirus 1 gene for outer capsid protein, complete cds, isolate: S2 DE standard. XX KW . XX OS Human astrovirus 1 OC Viruses; Riboviria; Astroviridae; Mamastrovirus. XX RN [1] RP 1-2404 RA Ushijima H., Kakizawa J., Leying W.; RT ; RL Submitted (08-JAN-1997) to the INSDC. RL Hiroshi Ushijima, Aino University, Aino Health Research Center; Shibuya RL Toho Building 4F, 2-17-3 Shibuya, Shibuya-ku, Tokyo 150-0002, Japan RL (E-mail:ushijima-hiroshi@jcom.home.ne.jp, Tel:81-3-3486-8481, RL Fax:81-3-3486-8481) XX RN [2] RX DOI; 10.1002/jmv.1043. RX PUBMED; 11424111. RA Wang Q.H., Kakizawa J., Wen L.Y., Shimizu M., Nishio O., Fang Z.Y., RA Ushijima H.; RT "Genetic analysis of the capsid region of astroviruses"; RL J. Med. Virol. 64(3):245-255(2001). XX DR MD5; b5e078f347d8313e0a96620d6331f9c6. DR EuropePMC; PMC2832772; 20100346. XX FH Key Location/Qualifiers FH FT source 1..2404 FT /organism="Human astrovirus 1" FT /isolate="S2 standard" FT /serotype="2" FT /mol_type="genomic RNA" FT /note="synonym: Human astrovirus type 1" FT /db_xref="taxon:12456" FT CDS 12..2402 FT /codon_start=1 FT /product="outer capsid protein" FT /db_xref="GOA:Q14V19" FT /db_xref="InterPro:IPR004337" FT /db_xref="InterPro:IPR022027" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q14V19" FT /protein_id="BAE97450.1" FT /translation="MASKSDKQVTVEVNNNGRNRSKSRARSQSRGRGRSAKITVNSHNQ FT GRRRNGRTKYQSNQRVRKIVNKQLRKQGVTGPKPAICQRATATLGTIGSNTTGATEIEA FT CILLNPVLVKDATGSTQFGPVQALGAQYSMWKLKYLNVKLTSMVGASAVNATVLRISLN FT PTSTPSSTSWSGLGARKHMDVTVGRNAVFKLRPSDLGGPRDGWWLTNTNDNASDTLGPS FT IEIHTLGKTMSSYKNEQFTGGLCLVELASEWCFTGYAANPNSVNLVKATDHEVNVTFEG FT SKGTPLIMNVPEHSHFARMGEQHSSISTTFSRAGGDATSDTVWQVLNTAVSAAELVAPP FT PFNWLIKGGWWFVKLIAGRTRTGTQQFYVYPSYQDALSNKPALFTGGVTGGVLRTTPVT FT TPQFTPMNQPNLGHGEHTSTIGRIVQEPSGGLRVLLTVGSIMSPNSADRQVWLNKTLTA FT PGTNPNDNLVKIAHDLSHYLIMQGFMHIKTVEWYTPDFQPSRDPTPIAGMSVMVNITKK FT ADVYFMKQFKNSHTNTRHQITSIFLIKPLADLEVQCYMSYFKRESHDNDGVAILTVRSM FT TSPETIRFHAGEWYLLTRPTLKENNLAEGWVWDRVELKSDTPNYAEQAVTYFMTPPPVD FT SQILYGGDTTLPRISSPPDNPSGRYMENHQQDCDSSDDEDDCETVLEETETEDEEDEDE FT DDEADRFDLHSPYGSEPEDSDENHRVTLLSTLINQGMTVERATRITKRAFPTCAEKLKR FT SVYMDLLASGASPSSAWSNACDEARNVGSNQLAKLSGDRGHAE" XX SQ Sequence 2404 BP; 718 A; 569 C; 558 G; 559 T; 0 other; aaagaagtgt gatggctagc aagtctgaca agcaagtcac tgttgaggtc aataacaatg 60 gccgaaacag gagcaaatcc agagctcgat cacaatctag aggtcgaggt agatcagcca 120 aaatcacagt caattctcac aaccaaggca gaagacgaaa cggacgcacc aaatatcaat 180 ctaatcagcg tgtccgtaaa attgtcaata aacaactcag gaaacagggt gtcacaggac 240 caaaacctgc aatatgccag agagccacag caacacttgg gacaattgga tcaaacacaa 300 caggagcaac agagatcgag gcgtgcatac tccttaatcc cgtccttgtt aaggacgcta 360 ctggaagtac tcagtttggg ccagtgcagg cgctaggtgc tcagtattca atgtggaaac 420 taaagtattt gaatgttaaa ctgacttcca tggtgggcgc ctcagctgtt aacgcgactg 480 tactccgcat ctcgctcaac cctacatcca ctccatcatc aactagctgg tctggacttg 540 gtgctcgtaa gcacatggat gttacagtgg gcaggaatgc agtctttaaa cttagaccat 600 cagaccttgg agggcccagg gatggctggt ggctcactaa taccaatgac aatgcatctg 660 atacattagg cccatctatt gaaattcaca cccttggtaa gaccatgtct tcctacaaaa 720 atgagcaatt taccggtgga ctatgtcttg ttgagcttgc ttcagaatgg tgttttactg 780 gctatgcagc taatccaaat tcagtcaatt tggttaaagc cactgatcat gaggtgaatg 840 tcacttttga gggctcaaaa ggtacgcccc taataatgaa tgtcccagag cacagccact 900 ttgcaagaat gggtgaacaa cattcctcca tctcaacaac attttcaaga gctggaggcg 960 atgcaacatc tgacactgtt tggcaggtgc tgaacacagc agtctcagca gcagagcttg 1020 tagccccacc accgttcaat tggcttataa agggtggctg gtggtttgta aagttgattg 1080 caggtagaac tagaactggt acccaacaat tttatgttta tcctagttat caggatgctt 1140 tatccaataa accagctctt ttcactggtg gagttacagg tggcgttcta cgtaccacac 1200 cggtaacaac tccacagttc actccaatga accaaccaaa ccttgggcat ggtgagcaca 1260 cttccaccat tggccgtatt gttcaagaac ccagtggggg actgcgtgtt ctgctaacag 1320 ttggctcaat catgagcccg aactcagctg ataggcaagt ttggctgaac aaaactctga 1380 cagcgccagg aacaaatcca aatgacaatc ttgtaaagat agcccacgac ttgagtcact 1440 atttgatcat gcaagggttt atgcatataa agacagtaga gtggtatact cctgattttc 1500 aaccttcgcg tgacccaacc cctattgctg gcatgtcagt gatggttaac ataacaaaga 1560 aggctgatgt ctacttcatg aagcaattca aaaattctca caccaacacc cgccatcaaa 1620 taacaagcat ctttttaatt aaaccattgg cagatttgga ggtgcaatgt tatatgagct 1680 actttaaaag agagtcacat gacaatgatg gggttgccat tcttacagtg agaagtatga 1740 ccagcccgga gactatcagg tttcacgctg gagaatggta tctgctaaca cgtcccacac 1800 ttaaggagaa caacctagca gagggctggg tttgggatag ggtggaactt aagagtgaca 1860 caccaaacta tgctgagcaa gcagtgacat atttcatgac accaccccca gtggactccc 1920 aaattttata tggaggtgac accacattgc ccagaatttc ctctccgcct gacaatccca 1980 gcgggcgata tatggaaaac caccagcaag actgtgactc ttctgatgat gaggatgatt 2040 gtgaaactgt tttagaggag acagaaactg aggatgagga agatgaggac gaagacgatg 2100 aagcggacag gtttgatctc cacagcccct atggttctga acctgaggac tctgatgaga 2160 accaccgtgt aaccctcctc tctacactca taaaccaagg aatgacagtg gagcgcgcaa 2220 caagaataac taaacgcgct ttcccaacct gcgctgagaa actgaagcgc agcgtgtaca 2280 tggacctgct tgcctccggt gcatcgccga gcagtgcatg gtcaaacgcg tgtgatgaag 2340 cacgcaatgt gggcagcaat cagctggcca aactttctgg agaccgcggc cacgccgagt 2400 agga 2404 // ID AB000289; SV 1; linear; genomic RNA; STD; VRL; 2401 BP. XX AC AB000289; XX DT 07-JUL-2006 (Rel. 88, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 2) XX DE Human astrovirus 1 gene for outer capsid protein, complete cds, isolate: DE OxfordAS 8811. XX KW . XX OS Human astrovirus 1 OC Viruses; Riboviria; Astroviridae; Mamastrovirus. XX RN [1] RP 1-2401 RA Ushijima H., Kakizawa J., Leying W.; RT ; RL Submitted (08-JAN-1997) to the INSDC. RL Hiroshi Ushijima, Aino University, Aino Health Research Center; Shibuya RL Toho Building 4F, 2-17-3 Shibuya, Shibuya-ku, Tokyo 150-0002, Japan RL (E-mail:ushijima-hiroshi@jcom.home.ne.jp, Tel:81-3-3486-8481, RL Fax:81-3-3486-8481) XX RN [2] RX DOI; 10.1002/jmv.1043. RX PUBMED; 11424111. RA Wang Q.H., Kakizawa J., Wen L.Y., Shimizu M., Nishio O., Fang Z.Y., RA Ushijima H.; RT "Genetic analysis of the capsid region of astroviruses"; RL J. Med. Virol. 64(3):245-255(2001). XX DR MD5; 84a43ec52466057ebe833debf2c4ac84. DR EuropePMC; PMC2832772; 20100346. DR EuropePMC; PMC3486218; 22933603. XX FH Key Location/Qualifiers FH FT source 1..2401 FT /organism="Human astrovirus 1" FT /isolate="OxfordAS 8811" FT /serotype="2" FT /mol_type="genomic RNA" FT /note="synonym: Human astrovirus type 1" FT /db_xref="taxon:12456" FT CDS 12..2399 FT /codon_start=1 FT /product="outer capsid protein" FT /db_xref="GOA:Q14V18" FT /db_xref="InterPro:IPR004337" FT /db_xref="InterPro:IPR022027" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q14V18" FT /protein_id="BAE97451.1" FT /translation="MASKSDKQVTVEVNNNGRNRSKSRARSQSRGRGRAVKITVNSHNK FT GRRQNGRNKYQSNQRVRKIVNKQLRKQGVTGPKPAICQRATATLGTIGSNTTGATEIEA FT CILLNPVLVKDATGSTQFGPVQALGAQYSMWKLKYLNVKLTSMVGASAVNGTVLRISLN FT PTSTPSSTSWSGLGARKHMDVTVGRNALFKLRPSDFGGPRDGWWLTNTNDNASDPLGPS FT IEIHTLGKTMSSYKNEQFTGGLFLVELASEWCFTGYAANPNLVNLVKSTDHEVNVTFEG FT SKGTPLIMNVPEHSHFARMAEQHSSISTTLSRAGGDATSDTVWQVLNTAVSAAELVTPP FT PFNWLIKGGWWLVKLIAGRARTGTKQFYVYPSYQDALSNKPALWTGGVDGGFQRTPPVT FT TLPFTPMNQPSFGPGEPPATLGRMVPDPSGEMRVLLTVCSIMSPNSADRQVWLNKTLTA FT PGSNTSGVNPDNLVKIAHDLGHYLIMQGFMHIKSVEWYTPDFQPSRDPGPISGMSVMVN FT ITKKADVYFMRQVKNSHTNNRHQVTSNCADLRTKLHELLQEGFTKTMTMLSISQVRSMT FT TTTTVRFQSGEWYLLTSTTIKENSLPESWVWDRVELQSNTAYYADQALAYFITPPPVDS FT KILFDGSIVLPSTATLLTDTSGRATGAQGADGESSDDEDDDAYVSEGTETEDEEDEDED FT DEADRFDLHSPYGSEPEDSDENNRVTLLSTLINQGMTVERATRITKRAFPTCADKMKRS FT VYMDLLASGASPSSAWSNACDEARSLGGNQLPKLSGDRGHAE" XX SQ Sequence 2401 BP; 707 A; 572 C; 574 G; 548 T; 0 other; aaagaagtgt gatggctagc aagtctgaca agcaagtcac tgtcgaggtc aataacaatg 60 gccgaaacag gagcaaatct agagctcgat cacaatcaag aggtcgaggt agagcagtca 120 aaattacagt caattcccac aacaagggca gaagacaaaa tggacgcaac aagtatcagt 180 ctaatcaacg tgtccgtaaa attgtcaata agcaactcag gaaacagggt gtcacaggac 240 ccaaacctgc aatatgccag cgagccacag caacactcgg cacaattgga tcaaacacca 300 caggagcaac agagatcgag gcgtgcatac ttctcaatcc cgtcctggtt aaggatgcta 360 ctgggagtac tcagtttggg ccagtgcagg cactaggagc ccaatactca atgtggaagc 420 ttaagtacct gaatgtcaag ctgacctcca tggttggcgc atcagctgtt aatggtactg 480 tgctccgcat ttcacttaat cccacatcca caccatcatc aaccagttgg tctggccttg 540 gtgcccgcaa acacatggat gttacagtgg gaagaaatgc actgtttaaa cttaggccat 600 cagattttgg ggggccgagg gatggttggt ggcttactaa tactaatgac aatgcctccg 660 acccgttggg cccatctatt gagatccata ccttgggtaa aactatgtct tcatataaaa 720 atgagcaatt cacaggtgga ctattcctcg ttgagcttgc ttcggaatgg tgttttactg 780 gctatgcagc aaacccaaat ttagttaatt tggttaaatc cactgatcat gaggtaaatg 840 tcacatttga gggctctaaa ggtacgcccc taataatgaa tgtacctgag catagccact 900 ttgccaggat ggctgaacaa cactcttcca tttcaacaac gctctcaaga gctggtggag 960 atgcaacatc tgatactgtt tggcaggttt taaatactgc agtgtctgca gcagaacttg 1020 taacgccacc tccatttaac tggctcataa agggtggctg gtggttggtg aaactaattg 1080 caggtagagc caggactggc accaagcagt tttatgttta tccaagctac caggacgcct 1140 tgtcaaataa gccagctctt tggactggtg gggtggacgg tggtttccaa aggacccccc 1200 cagtaaccac tttgccgttt accccgatga accagccaag ctttgggcct ggtgaacccc 1260 ctgccactct tggccgtatg gtgccagacc caagtggaga aatgcgtgtt ctgctaactg 1320 tttgctcaat aatgagcccg aactcagctg acaggcaggt gtggctaaac aagacactga 1380 cagcaccagg atccaataca agtggagtta atccagacaa tcttgtaaaa atagcccatg 1440 acttaggtca ctacttaatc atgcaagggt ttatgcatat aaagtcggta gagtggtaca 1500 ctcctgactt ccagccctca cgtgacccag gtccaatttc tggcatgtca gtaatggtca 1560 acataacaaa gaaagcagat gtctacttca tgaggcaggt taaaaattct cacactaaca 1620 accgccacca ggtaacaagc aactgtgcag atttgaggac caagttacat gagctacttc 1680 aagagggatt caccaagaca atgacaatgc tgtcaatctc acaagttagg agcatgacaa 1740 ccaccacaac tgtcagattt caatcagggg aatggtactt gctaaccagc accacaatta 1800 aggaaaacag tttgccagaa tcttgggtgt gggacagagt agaactccag agcaacacag 1860 catactatgc cgaccaggcg ttggcatatt ttataacacc tccaccagtt gactccaaga 1920 ttctttttga tggcagcatt gtgctaccta gcactgccac cttgttaaca gacaccagtg 1980 gacgggccac tggggcccaa ggtgcagatg gtgaatcctc tgatgatgag gatgatgatg 2040 cttatgtatc agaagggaca gaaactgaag atgaggaaga tgaggacgaa gacgacgaag 2100 cggacaggtt tgatctccac agtccttacg ggtctgaacc tgaggactct gatgagaaca 2160 accgtgtaac cctcctctct acactcataa accaaggaat gacagtggaa cgcgcaacaa 2220 gaataacaaa acgcgccttc ccaacctgtg ctgataagat gaagcgcagt gtttacatgg 2280 acctgcttgc ttccggtgca tcgccgagca gtgcatggtc aaatgcgtgt gatgaagcac 2340 gcagtctggg tggtaatcaa ctgcccaaac tttctggaga ccgcggccac gccgagtagg 2400 a 2401 // ID AB000290; SV 1; linear; genomic RNA; STD; VRL; 2404 BP. XX AC AB000290; XX DT 07-JUL-2006 (Rel. 88, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 2) XX DE Human astrovirus 1 gene for outer capsid protein, complete cds, isolate: DE NORAS 1128. XX KW . XX OS Human astrovirus 1 OC Viruses; Riboviria; Astroviridae; Mamastrovirus. XX RN [1] RP 1-2404 RA Ushijima H., Kakizawa J., Leying W.; RT ; RL Submitted (08-JAN-1997) to the INSDC. RL Hiroshi Ushijima, Aino University, Aino Health Research Center; Shibuya RL Toho Building 4F, 2-17-3 Shibuya, Shibuya-ku, Tokyo 150-0002, Japan RL (E-mail:ushijima-hiroshi@jcom.home.ne.jp, Tel:81-3-3486-8481, RL Fax:81-3-3486-8481) XX RN [2] RX DOI; 10.1002/jmv.1043. RX PUBMED; 11424111. RA Wang Q.H., Kakizawa J., Wen L.Y., Shimizu M., Nishio O., Fang Z.Y., RA Ushijima H.; RT "Genetic analysis of the capsid region of astroviruses"; RL J. Med. Virol. 64(3):245-255(2001). XX DR MD5; 3bec8e77847b5ab27c5437feef5b8d66. DR EuropePMC; PMC2832772; 20100346. DR EuropePMC; PMC3486218; 22933603. XX FH Key Location/Qualifiers FH FT source 1..2404 FT /organism="Human astrovirus 1" FT /isolate="NORAS 1128" FT /serotype="2" FT /mol_type="genomic RNA" FT /note="synonym: Human astrovirus type 1" FT /db_xref="taxon:12456" FT CDS 12..2402 FT /codon_start=1 FT /product="outer capsid protein" FT /db_xref="GOA:Q14V17" FT /db_xref="InterPro:IPR004337" FT /db_xref="InterPro:IPR022027" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q14V17" FT /protein_id="BAE97452.1" FT /translation="MASKSDKQVTVEVNNNGRNRSKSRARSQSRGRGRSVKITVNSQNK FT GRRQHGRNKYQSTQRVRKIVNKQLRKQGVTGPKLAICQRATATLGTIGSNTTGATEIEA FT CILLNPVLVKDATGSTQFGPVQALGAQYSMWKLKYLNVKLTSMVGASAVNATVLRISLN FT PTSTPSSTSWSGLRARKHMDVTVGRNALFKLRPSDLGGPRDGWWLTNTNDNASDTLGPS FT IEIHTLGKTMSSYKNEPFTGGLFLVELASEWCFTGYAANPNLVNLVKSTDYEVNVTSEG FT SKGTPLIMNVPEHSHFARMAEQHSSISTTFSRAGGDATSDTVWQVLNTAVSAAELVTTP FT PFNWLIKGGWWFVKLIAGRTRTGTKQFYVYPSYQDALSNKPALFTGGVTGGGPRTTPVT FT TLQFTPMNQPSLGHGVQTSTIGRIVQEPSGGLRVLLTVCSIMNPDSTDRHVWLNKTLTA FT PGTNSNDNLVKIAHDLGHYLIMQGFMHIKTVEWYTPDFQPSRDPTPIAGMSVMVNITKK FT ADVYFMKQFKNSYTNNRHQITSIFLIKPLADFKVQCYMSYFKRESHDNDGVANLTVRSM FT TSPETIRFQVGEWYLLTSTTLKENNLPEGWVWDRVELKSDTPYYADQALTYFITPPPVD FT SQILFEGNTTLPRISSPPDNPSGRYMESHQQDCDSSDDEDDCENVSEETETEDEEDEDE FT DDEADRFDLHSPYSSEPEDSDEINRVTLLSTLINQGMTVERATRITKRAFPTCAEKLKR FT SVYMDLLASGASPSSAWSNACDEARNVGSNQLAKLSGDRGHAE" XX SQ Sequence 2404 BP; 727 A; 563 C; 546 G; 568 T; 0 other; aaagaagtgt gatggctagc aagtctgaca agcaagttac tgtcgaggtc aataataatg 60 gccggaacag gagcaagtct agagcccgat cccaatctag aggtcgaggt agatctgtca 120 aaatcacagt caactcacag aataaaggaa gaagacaaca cggacgcaac aaatatcagt 180 ctactcaacg tgtccgtaaa attgtcaata aacaactcag gaaacagggt gtcacaggac 240 ccaaacttgc aatatgccag agagccactg caacacttgg gacaattggg tcaaacacaa 300 caggagcaac agagattgag gcgtgcatac tccttaatcc cgtcctggtt aaggacgcta 360 ctgggagtac tcagtttggg ccagtgcagg cgctaggcgc tcagtattcg atgtggaaac 420 taaaatattt aaatgttaaa ttgacttcca tggtgggcgc ctcagctgtt aatgcgactg 480 tactccgcat ctcactcaac cctacatcca ctccatcatc aactagttgg tctggtcttc 540 gtgctcgtaa gcacatggat gtaacagttg gaaggaatgc actcttcaaa cttagaccat 600 cagatcttgg agggcccagg gatggctggt ggcttactaa taccaatgac aatgcttccg 660 acacattagg tccatctatt gaaatacaca cccttggtaa aaccatgtct tcatataaaa 720 atgaaccatt taccggtgga ctatttcttg tcgagcttgc ttcagaatgg tgcttcactg 780 gctatgcagc taatccaaat ctggttaatt tggtcaaatc cactgactat gaggtgaatg 840 tcacctctga gggctcaaaa ggcacgccct taataatgaa tgttccagag catagccatt 900 ttgcaaggat ggccgaacaa cattcctcca tctcaacaac attctcaaga gctggaggag 960 atgcaacatc cgatactgtt tggcaggtgc tgaacacagc agtctcagca gcagagcttg 1020 tgacaacacc accgttcaat tggcttataa agggtggctg gtggtttgta aaactgattg 1080 caggcagaac tagaactggc actaaacaat tttatgttta tccaagctat caggatgctt 1140 tatccaataa accagccctt ttcactggtg gagtcacagg tggcggtcca cgcaccacac 1200 cagtaacaac tctacagttc actccaatga accagccaag tcttggccat ggtgtgcaaa 1260 cttctaccat tggccgtatt gttcaagaac caagtggggg actgcgtgtt cttctgacag 1320 tttgctcaat catgaacccg gactcaaccg acagacacgt ttggctgaac aaaactctga 1380 cagcgccagg aacaaattca aatgacaatc ttgtaaagat agcccacgac ttgggtcact 1440 atttgatcat gcaagggttt atgcatataa agacagtaga gtggtatact cctgattttc 1500 aaccttcgcg tgacccaacc cctattgctg gcatgtcagt gatggttaac ataacaaaga 1560 aggctgatgt ctacttcatg aagcaattca aaaattctta caccaacaac cgccatcaaa 1620 taacaagcat ctttttaatt aaaccattgg cagattttaa ggtgcaatgt tatatgagct 1680 actttaaaag agagtctcat gacaatgatg gggttgccaa tcttacagtg agaagtatga 1740 ccagcccgga gactatcagg tttcaagttg gagaatggta tttgctaaca agtaccacac 1800 ttaaggagaa caacctacca gagggctggg tttgggatag ggtggagctt aagagtgaca 1860 caccatacta tgctgatcaa gcattgacat atttcataac accaccccca gtggactccc 1920 aaattttatt tgaaggtaac accacattgc ccagaatttc ctctccgcct gacaatccca 1980 gcgggcgata tatggaaagc caccagcaag actgtgactc ttctgatgat gaggatgatt 2040 gtgaaaatgt ttcagaggag acagaaactg aggatgagga agatgaggac gaagacgatg 2100 aagcggacag gtttgatctc cacagcccct atagttctga acctgaggac tctgatgaga 2160 tcaaccgtgt aaccctcctc tccacactca taaaccaagg aatgacagtg gagcgcgcaa 2220 caagaataac taaacgcgct ttcccaacct gcgctgagaa actgaagcgc agcgtgtaca 2280 tggacctgct tgcctccggt gcatcgccga gcagtgcatg gtcaaacgcg tgtgatgaag 2340 cacgcaatgt gggcagcaat cagctggcca aactttctgg agaccgcggc cacgccgagt 2400 agga 2404 // ID AB000291; SV 1; linear; genomic RNA; STD; VRL; 2401 BP. XX AC AB000291; XX DT 07-JUL-2006 (Rel. 88, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 2) XX DE Human astrovirus 1 gene for outer capsid protein, complete cds, isolate: S3 DE standard. XX KW . XX OS Human astrovirus 1 OC Viruses; Riboviria; Astroviridae; Mamastrovirus. XX RN [1] RP 1-2401 RA Ushijima H., Kakizawa J., Leying W.; RT ; RL Submitted (08-JAN-1997) to the INSDC. RL Hiroshi Ushijima, Aino University, Aino Health Research Center; Shibuya RL Toho Building 4F, 2-17-3 Shibuya, Shibuya-ku, Tokyo 150-0002, Japan RL (E-mail:ushijima-hiroshi@jcom.home.ne.jp, Tel:81-3-3486-8481, RL Fax:81-3-3486-8481) XX RN [2] RX DOI; 10.1002/jmv.1043. RX PUBMED; 11424111. RA Wang Q.H., Kakizawa J., Wen L.Y., Shimizu M., Nishio O., Fang Z.Y., RA Ushijima H.; RT "Genetic analysis of the capsid region of astroviruses"; RL J. Med. Virol. 64(3):245-255(2001). XX DR MD5; 92ad4b7acd93e8e4bd31eebe8e760c84. DR EuropePMC; PMC2832772; 20100346. XX FH Key Location/Qualifiers FH FT source 1..2401 FT /organism="Human astrovirus 1" FT /isolate="S3 standard" FT /serotype="3" FT /mol_type="genomic RNA" FT /note="synonym: Human astrovirus type 1" FT /db_xref="taxon:12456" FT CDS 12..2399 FT /codon_start=1 FT /product="outer capsid protein" FT /db_xref="GOA:Q14V16" FT /db_xref="InterPro:IPR004337" FT /db_xref="InterPro:IPR022027" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q14V16" FT /protein_id="BAE97453.1" FT /translation="MASKSDKQVTVEVKNNNNGRNRSRSRARSQSRGRGKSVKITVNSR FT SRGRRQNGRDKYQSNQRVRNIVTKQLRKQGVTGPKPAICQRATATLGTIGSNTSGTTEI FT EACILLNPVLVKDATGSTQFGPVQALGAQYSMWKLKYLNVKLTSMVGASAVNGTVVRVS FT LNPTSTPSSTSWSGLGARKHLDVTVGKNAVFKLKPADLGGPRDGWWLTNTNDNASDTLG FT PSVEIHTLGMTMSSYKNEQFTGGLFLVELASEWCFTGYAANPNLVNLEKSTDKQVNVTF FT EGSNGTPLIMKVPEASHFARTAVARSSLPTTLARAGQNTTSDTVWQVLNTAVSAAELVT FT PPPFNWLVKGGWWFVKLIAGRARTGTRSFYVYPSYQDALSNKPALCTGSAPSGMRSRAA FT VMTTLQFTQMNQPSLGHGEMTATLGRAIPSPGDTFNVVLTIGQPLAPNTLTKQSWLNKT FT TVSPQNHHVVKIAKDVNNYTTMQGFTPISSVDWYTTDFQPSEEPTPIPGLQVLVNSSKK FT ADVYAIQQYLNNQTNNKVQLTSIFLVKVTTSFQVNQLFGAISTGAMELVLLLENLKVRS FT DTTAQDVNFPVGWYLMTNTAIFNAPAPPGWIWQNVELLNDTAYLIDQGMMHLIMPPPAN FT TQLLFEMRTSVTGSRSMISSEEPDTHEPGDEWCDALDASDSRVFLEETDYEDEEDEDED FT DEADRFDLHSSYGSEPEDDDENNRVTLLSTLINQGMTVERATRITKRAFPTSADKTKRS FT VYMDLLASGLSPGNAWSHACEEARIMGTNQMPNVSGDRGHAE" XX SQ Sequence 2401 BP; 691 A; 556 C; 571 G; 583 T; 0 other; aaagaagtgt gatggctagc aagtctgata agcaagtcac tgttgaggtc aaaaacaaca 60 acaatggccg aaacaggagc agatctaggg cccggtctca gtctagaggc cgtggcaagt 120 cagtcaaaat tacagtcaat tccaggagta gaggtagaag acaaaacgga cgcgacaaat 180 atcagtctaa tcaacgtgtc cgtaacattg tcactaaaca actcaggaaa cagggtgtca 240 caggacctaa accagcaatt tgccaacgtg ccacagcaac acttgggaca atcggctcaa 300 acaccagtgg aacgacggag attgaggcgt gtatactcct taatcccgtc cttgttaagg 360 atgctactgg gagtactcaa tttgggccag tgcaggcgct aggggcacaa tattctatgt 420 ggaaattgaa gtacttaaat gtgaaattga catcaatggt tggtgcatca gccgttaatg 480 gtacagttgt aagggtttct ctcaatccaa cctcaacgcc ttcatctacg agctggtctg 540 ggcttggcgc tcgtaaacat cttgatgtga ctgttgggaa aaacgctgtc tttaaactta 600 aaccagctga cctgggtgga cccagagatg ggtggtggtt gactaacaca aatgacaatg 660 cttcagacac actagggccc tctgttgaga tacatactct tggcatgaca atgtcctcat 720 ataaaaatga gcaatttaca ggggggcttt tcctagttga attggcctca gagtggtgct 780 ttacaggtta tgcagctaac cccaacctgg tgaaccttga gaagtcaact gacaaacaag 840 ttaatgtaac ttttgaaggt tctaatggca cgccacttat aatgaaggtt ccagaagcaa 900 gccattttgc caggactgcc gtagcgcgtt cctcattacc taccaccttg gctagagctg 960 gacaaaacac cacctctgac accgtctggc aagttttgaa cactgctgtc tcagctgcag 1020 agctggtgac accgccgcca tttaactggc ttgttaaggg tggctggtgg tttgtgaagc 1080 ttatagctgg aagggctaga actggaacac gtagtttcta cgtctatcct agctatcagg 1140 atgccctctc aaataaacca gctctatgca ctggcagtgc gccaagtggt atgaggtcac 1200 gcgcagcagt aatgacaacg ctgcaattca cacaaatgaa ccagcccagt cttggacatg 1260 gagagatgac cgccactcta ggtagagcca taccatctcc tggtgacacg tttaatgttg 1320 tgttgaccat tggccagcca ttggctccaa acacattgac aaaacagagt tggctgaaca 1380 aaacaacagt gtcgccacaa aaccatcatg tggtgaaaat tgctaaagat gtgaataact 1440 acaccactat gcagggcttc acacctatta gctctgttga ttggtacact acagattttc 1500 agccatcaga ggagcccact cccatacccg ggttgcaggt gctggttaat agttctaaga 1560 aggctgatgt ttatgccata caacagtatt taaataacca gacaaacaat aaagtacaac 1620 tcaccagcat tttcctggtt aaagtcacta ccagtttcca ggttaaccaa ctatttggag 1680 ctatttctac aggagctatg gaactggtac tactgttgga aaatctgaag gtgcgttcag 1740 acactactgc acaggatgtt aactttcctg ttggttggta tctcatgacc aatacggcca 1800 tatttaacgc acccgcacca cctggatgga tttggcagaa tgttgagctt ctgaatgata 1860 cagcttacct cattgaccag ggtatgatgc acctcattat gccacctcct gcaaacactc 1920 agttgctgtt tgagatgcgc acttccgtta caggatccag gtctatgatc tctagtgagg 1980 aacctgacac ccatgaacct ggtgatgaat ggtgcgacgc actcgatgca agtgactctc 2040 gagtgttttt ggaagagaca gattatgaag atgaggaaga tgaggacgaa gacgatgaag 2100 cggacaggtt tgatcttcat agttcttatg gctcggaacc tgaggacgat gatgaaaata 2160 accgtgtaac cctcctctct acactcataa atcaaggaat gacagtggag cgcgcgacaa 2220 ggatcaccaa acgtgcgttc cccactagcg ctgataaaac aaagcgcagt gtatacatgg 2280 acctgcttgc atctggtctt tcaccaggca atgcatggtc acatgcgtgc gaagaggcac 2340 gcatcatggg cactaatcaa atgcctaatg tttctggaga ccgcggccac gccgagtagg 2400 a 2401 // ID AB000292; SV 1; linear; genomic RNA; STD; VRL; 2401 BP. XX AC AB000292; XX DT 07-JUL-2006 (Rel. 88, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 2) XX DE Human astrovirus 1 gene for outer capsid protein, complete cds, isolate: DE O-13. XX KW . XX OS Human astrovirus 1 OC Viruses; Riboviria; Astroviridae; Mamastrovirus. XX RN [1] RP 1-2401 RA Ushijima H., Kakizawa J., Leying W.; RT ; RL Submitted (08-JAN-1997) to the INSDC. RL Hiroshi Ushijima, Aino University, Aino Health Research Center; Shibuya RL Toho Building 4F, 2-17-3 Shibuya, Shibuya-ku, Tokyo 150-0002, Japan RL (E-mail:ushijima-hiroshi@jcom.home.ne.jp, Tel:81-3-3486-8481, RL Fax:81-3-3486-8481) XX RN [2] RX DOI; 10.1002/jmv.1043. RX PUBMED; 11424111. RA Wang Q.H., Kakizawa J., Wen L.Y., Shimizu M., Nishio O., Fang Z.Y., RA Ushijima H.; RT "Genetic analysis of the capsid region of astroviruses"; RL J. Med. Virol. 64(3):245-255(2001). XX DR MD5; eca0a4f8f3919a9534b4cff6fcc08fae. DR EuropePMC; PMC2832772; 20100346. XX FH Key Location/Qualifiers FH FT source 1..2401 FT /organism="Human astrovirus 1" FT /isolate="O-13" FT /serotype="3" FT /mol_type="genomic RNA" FT /note="synonym: Human astrovirus type 1" FT /db_xref="taxon:12456" FT CDS 12..2399 FT /codon_start=1 FT /product="outer capsid protein" FT /db_xref="GOA:Q14V15" FT /db_xref="InterPro:IPR004337" FT /db_xref="InterPro:IPR022027" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q14V15" FT /protein_id="BAE97454.1" FT /translation="MASKSDKQVTVEVKNNNNGRNRSRSRARSQSRGRGKSVKITVNSR FT SRGRRQNGRDKYQSNQRVRNIVTKQLRKQGVTGPKPAICQSATATLGTIGSNTSGTTEI FT EACILLNPVLVKDATGSTQFGPVQALGAQYSMWKLKYLNVKLTSMVGASAVNGTVVRVS FT LNPTSTPSSTSWSGLGAGKHLDVTVGKNAVFKLKPADLGGPRDGWWLTNTNDNASDTLG FT PSVEIHTLGMTMSSYKNEQFTGGLFLVELASEWCFTGYAANPNLVNLVKSTDKQVNVTF FT EGSNGTPLIMKVPEASHFARTAVARSSLPTTLARAGQNTTSDTVWQVLNTAVSAAELVT FT PPPFNWLVKGGWWFVKLIAGRARTGTRSFYVYPSYQDALSNKPALCTGSAPSGMRTRAA FT VMTTLQFTQMNQPSLGHGEMTATLGRAIPSPGDTFNVVLTIGQPLAPNTLTKQNWLNKT FT TVSPQNHHVVKIAKDVNNYTTMQGFTPISSVDWYTTDFQPSEEPTPIPGLQVLVNSSKK FT ADVYAIQQYLNNQTNNKVQLTSIFLVKVTTSFQVNQLFGAISTGAMELVLLLENLKVRS FT DTTEQDVNFPVGWYLMTNTAIFNAPAPPGWIWQNVELLNDTAYLIDQGMMHLIMPPPAN FT TQLLFEGNTSITGSRSMISSEEPDTHEPGDEWCDALDASDSRVLLEETDYEDEEDEDED FT DEADRFDLHSSYGSEPEDDDENNRVTLLSTLINQGMTVERATRITKRAFPTSADKTKRS FT VYMDLLASGLSPGNAWSHACEEARIMGTNQMPNVSGDRGHAE" XX SQ Sequence 2401 BP; 697 A; 554 C; 570 G; 580 T; 0 other; aaagaagtgt gatggctagc aagtctgata agcaagtcac tgttgaggtc aaaaataaca 60 acaatggccg aaacaggagc agatctaggg cccggtctca gtctagaggc cgtggcaagt 120 cagtcaaaat tacagtcaat tccaggagta gaggtagaag acaaaacgga cgcgacaaat 180 atcagtctaa tcaacgtgtc cgtaacattg tcactaaaca actcaggaaa cagggtgtca 240 caggaccaaa acctgcaata tgtcagagtg ccacagcaac acttgggaca atcggctcaa 300 acaccagtgg gacgacggag attgaggcgt gtatactcct caaccctgtc cttgttaagg 360 atgctactgg gagtactcaa tttggcccag tgcaggcgct aggtgcacag tattctatgt 420 ggaagttgaa gtacttgaat gtcaaattga catcaatggt tggtgcatca gccgttaatg 480 gtacagttgt cagggtctct ctcaatccaa cctcaacgcc ttcatctacg agctggtctg 540 ggcttggcgc tggtaaacat cttgatgtga ctgttgggaa aaacgctgtc tttaaactta 600 aaccagccga cctgggtggg cccagagatg ggtggtggtt gactaacaca aatgacaatg 660 cttcagacac actagggccc tctgttgaaa tacatactct tggcatgaca atgtcctcat 720 ataaaaatga gcaatttaca ggggggcttt tcctagttga attggcctca gagtggtgct 780 ttacaggtta cgcagccaac cctaacctgg tgaaccttgt gaagtcaact gacaaacaag 840 ttaatgtaac ttttgaaggt tctaatggta cgccacttat aatgaaggtt ccagaagcaa 900 gccattttgc caggactgcc gtagcgcgtt cctcattacc taccaccttg gctagggctg 960 gacaaaacac cacctctgac accgtctggc aagttttgaa cactgctgtc tcagctgcag 1020 agctggtgac accgccgcca tttaactggc ttgttaaggg tggctggtgg tttgtgaagc 1080 ttatagcagg aagagctaga actggaacac gtagtttcta cgtctatcct agctatcagg 1140 atgccctctc aaataaacca gctctatgca ctggcagtgc gccaagtggt atgaggacac 1200 gcgcagcagt aatgacaacg ctgcaattca cacaaatgaa ccagcccagt cttggacatg 1260 gagagatgac cgccactcta ggtagagcca taccatctcc tggtgacacg tttaatgttg 1320 tgttgaccat tggccagcca ttggctccaa acacattgac aaaacagaat tggctgaata 1380 aaacaacagt gtcgccacaa aaccatcatg tggtgaaaat tgctaaagat gtgaataact 1440 acaccactat gcagggcttc acacctatta gctctgttga ttggtacact acagattttc 1500 agccatcaga ggagcccact cccatacctg ggttgcaggt gctggttaat agttctaaga 1560 aggctgatgt ttatgccata caacagtact taaataacca gacaaataat aaagtacaac 1620 tcactagcat ttttctggtt aaagtcacta ccagtttcca ggttaaccaa ctatttggag 1680 ctatttctac aggagctatg gaactggtac tactgttgga aaatctgaag gtgcgttcag 1740 acactactga acaggatgtt aactttcctg ttggttggta cctcatgacc aatacggcca 1800 tatttaacgc acccgcacca cctggatgga tttggcagaa tgttgagctt ctgaatgata 1860 cagcttacct cattgaccag ggtatgatgc acctcattat gccacctcct gcaaacactc 1920 agttgctgtt tgaaggtaac acctccatta caggatccag gtctatgatc tctagtgagg 1980 aacctgacac ccatgaacct ggtgatgaat ggtgcgacgc actcgatgca agtgactctc 2040 gagtgttgtt ggaagagaca gattatgaag atgaggaaga cgaggacgaa gacgatgaag 2100 cggacaggtt tgatcttcat agttcttatg gttcggaacc tgaggatgat gatgaaaata 2160 accgagtaac cctcctctca acactcataa atcaaggaat gacagtggaa cgcgcaacaa 2220 ggatcaccaa acgtgcgttc cccactagcg ctgataaaac aaagcgcagt gtatacatgg 2280 acctgcttgc atctggtctt tcaccaggca atgcatggtc acatgcgtgc gaagaggcac 2340 gcatcatggg caccaatcaa atgcctaatg tttctggaga ccgcggccac gccgagtagg 2400 a 2401 // ID AB000293; SV 1; linear; genomic RNA; STD; VRL; 2401 BP. XX AC AB000293; XX DT 07-JUL-2006 (Rel. 88, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 2) XX DE Human astrovirus 1 gene for outer capsid protein, complete cds, isolate: DE O-14. XX KW . XX OS Human astrovirus 1 OC Viruses; Riboviria; Astroviridae; Mamastrovirus. XX RN [1] RP 1-2401 RA Ushijima H., Kakizawa J., Leying W.; RT ; RL Submitted (08-JAN-1997) to the INSDC. RL Hiroshi Ushijima, Aino University, Aino Health Research Center; Shibuya RL Toho Building 4F, 2-17-3 Shibuya, Shibuya-ku, Tokyo 150-0002, Japan RL (E-mail:ushijima-hiroshi@jcom.home.ne.jp, Tel:81-3-3486-8481, RL Fax:81-3-3486-8481) XX RN [2] RX DOI; 10.1002/jmv.1043. RX PUBMED; 11424111. RA Wang Q.H., Kakizawa J., Wen L.Y., Shimizu M., Nishio O., Fang Z.Y., RA Ushijima H.; RT "Genetic analysis of the capsid region of astroviruses"; RL J. Med. Virol. 64(3):245-255(2001). XX DR MD5; 71f8a00f9b2e5d9df30ec98977da0e6e. DR EuropePMC; PMC2832772; 20100346. XX FH Key Location/Qualifiers FH FT source 1..2401 FT /organism="Human astrovirus 1" FT /isolate="O-14" FT /serotype="3" FT /mol_type="genomic RNA" FT /note="synonym: Human astrovirus type 1" FT /db_xref="taxon:12456" FT CDS 12..2399 FT /codon_start=1 FT /product="outer capsid protein" FT /db_xref="GOA:Q14V14" FT /db_xref="InterPro:IPR004337" FT /db_xref="InterPro:IPR022027" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q14V14" FT /protein_id="BAE97455.1" FT /translation="MASKSDKQVTVEVKNNNNGRNRSRSRARSQSRGRGRSVKITVNSR FT SRGRRQNGRDKYQSNQRVRNIVTKQLTKQGVTGPKPAICQRATATLGTIGSNTSGTTEI FT EACILLNPVLVKDATGSTQFGPVQALGAQYSMWKLKYLNVKLTSMVGASAVNGTVVRVS FT LNPTSTPSSTSWSGLGARKHLDVTVGKNAVFKLKPADLGGPRDGWWLTHTNDNASDTLG FT PSVEIHTLGMTMSSYKNEQFTGGLFLVELASEWCFTGYAANPNLVNLVKSTDKQVNVTF FT EGSNGTPLIMKVPEASHFARTAVARSSLPTTLARAGHNTTSDTVWQVLNTAVSAAELVT FT PPPFNWLVKGGWWFVKLIAGRARTGTRSFYVYPSYQDALSNKPALCTGSAPSGMRTRAA FT VMTTLQFTQMNQPSPGHGEMTATLGRAIPSPGDTFNVVLTIGQPLAPNTLTKQNWLNKT FT TVSPQNHHVVKIAKDVNNYTTMQGFTPISSVDWYTTDFQPSEEPTPIPGLQVLVNSSKK FT ADVYAIQQYFINQTNNKVQLTSIFLVKVTTSFQVNQLFGAISTGAMELVLLLENLKVRS FT DTTAQDVNFPVGWYLMTNTAIFNAPAPPGWIWQNVELLNDTAYLIDQGMMHLIMPPPAN FT TQLLFEMRTSITGSRSMISSEEPDTHEPGEEWCDALDASDSRVLLEETDYEDEEDEDED FT DEADRFDLHSSYGSEPEDDDENNRVTLLSTLINQGMTVERATRITKRAFPTSADKTKRS FT VYMDLLASGLSPGNAWSHACEEARIMGTNQMPNVSGDRGHAE" XX SQ Sequence 2401 BP; 694 A; 559 C; 567 G; 581 T; 0 other; aaagaagtgt gatggctagc aagtctgata agcaagtcac tgttgaggtc aaaaataaca 60 acaatggccg aaacaggagc agatctaggg cccggtctca gtctagaggc cgtggcaggt 120 cagtcaaaat tacagtcaat tccaggagta gaggtagaag acaaaacgga cgcgacaaat 180 atcagtctaa tcaacgtgtc cgtaacattg tcactaaaca actcacgaaa cagggtgtca 240 caggaccaaa accagcaata tgccaacgtg ccacagcaac acttgggaca atcggctcaa 300 acaccagtgg aacgacggag atcgaggcgt gtatactcct taatcccgtc cttgttaagg 360 atgctactgg gagtactcaa tttgggccag tgcaggcgct aggggcacaa tattctatgt 420 ggaaattgaa gtacttaaat gtgaaattga catcaatggt tggtgcatca gccgttaatg 480 gtacagttgt aagggtttct ctcaatccaa cctcaacgcc ttcatctacg agctggtctg 540 ggcttggcgc tcgtaaacat cttgatgtga ctgttgggaa aaacgctgtc tttaaactta 600 aaccagctga cctgggtggg cccagagatg gctggtggtt gactcacaca aatgacaatg 660 cttcagacac actagggccc tctgttgaaa tacatactct tggcatgaca atgtcctcat 720 ataaaaatga gcaatttaca ggggggcttt tcctagttga attggcctca gagtggtgct 780 ttacaggtta tgcagccaac cctaacctgg tgaaccttgt gaagtcaact gacaaacaag 840 ttaatgtaac ttttgaaggt tctaatggta cgccacttat aatgaaggtt ccagaagcaa 900 gccattttgc caggactgcc gtagcgcgtt cctcattacc taccaccttg gctagggctg 960 gacacaacac cacctctgac accgtctggc aagttttgaa cactgctgtc tcagctgcag 1020 agctggtaac accgccgcca tttaactggc ttgttaaggg tggctggtgg tttgtgaagc 1080 ttatagcagg aagagctaga actggaacac gtagtttcta cgtctatcct agctatcagg 1140 atgccctctc aaataaacca gctctatgca ctggcagtgc gccaagtggt atgaggacac 1200 gcgcagcagt aatgacaacg ctgcaattca cacaaatgaa ccagcccagt cctggacatg 1260 gagagatgac cgccactcta ggtagagcca taccatctcc tggtgacacg tttaatgttg 1320 tgttgaccat tggccagcca ttggctccaa acacattgac aaaacagaat tggctgaata 1380 aaacaacagt gtcgccacaa aaccatcatg tggtgaaaat tgctaaagat gtgaataact 1440 acaccactat gcagggcttc acacctatta gctctgttga ttggtacact acagattttc 1500 agccatcaga ggagcccact cccatacctg ggttgcaggt gctggttaat agttctaaga 1560 aggctgatgt ttatgccata caacagtact tcattaacca gacaaacaat aaagtacaac 1620 tcactagcat ttttctggtt aaagtcacta ccagtttcca ggttaaccaa ctatttggag 1680 ctatttctac aggagctatg gaactggtac tactgttgga aaatctgaag gtgcgttcag 1740 acactactgc acaggatgtt aactttcctg ttggttggta cctcatgacc aatacggcca 1800 tatttaacgc acccgcacca cctggatgga tttggcagaa tgttgagctt ctgaatgata 1860 cagcttacct cattgaccag ggtatgatgc acctcattat gccacctcct gcaaacactc 1920 agttgctgtt tgagatgcgc acttccatta caggatccag gtctatgatc tctagtgagg 1980 aacctgacac ccatgaacct ggtgaagaat ggtgcgacgc actcgatgca agtgactctc 2040 gagtgttgtt ggaagagaca gattatgaag atgaggaaga cgaggacgaa gacgatgaag 2100 cggacaggtt tgatcttcat agttcttatg gttcggaacc tgaggacgat gatgaaaata 2160 accgtgtaac cctcctctct acactcataa atcaaggaat gacagtggag cgcgcaacaa 2220 ggatcaccaa acgtgcgttc cccactagcg ctgataaaac aaagcgcagt gtatacatgg 2280 acctgcttgc atctggtctt tcaccaggca atgcatggtc acatgcgtgc gaagaggcac 2340 gcatcatggg cactaatcaa atgcctaatg tttctggaga ccgcggccac gccgagtagg 2400 a 2401 // ID AB000294; SV 1; linear; genomic RNA; STD; VRL; 2401 BP. XX AC AB000294; XX DT 07-JUL-2006 (Rel. 88, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 2) XX DE Human astrovirus 1 gene for outer capsid protein, complete cds, isolate: DE O-28. XX KW . XX OS Human astrovirus 1 OC Viruses; Riboviria; Astroviridae; Mamastrovirus. XX RN [1] RP 1-2401 RA Ushijima H., Kakizawa J., Leying W.; RT ; RL Submitted (08-JAN-1997) to the INSDC. RL Hiroshi Ushijima, Aino University, Aino Health Research Center; Shibuya RL Toho Building 4F, 2-17-3 Shibuya, Shibuya-ku, Tokyo 150-0002, Japan RL (E-mail:ushijima-hiroshi@jcom.home.ne.jp, Tel:81-3-3486-8481, RL Fax:81-3-3486-8481) XX RN [2] RX DOI; 10.1002/jmv.1043. RX PUBMED; 11424111. RA Wang Q.H., Kakizawa J., Wen L.Y., Shimizu M., Nishio O., Fang Z.Y., RA Ushijima H.; RT "Genetic analysis of the capsid region of astroviruses"; RL J. Med. Virol. 64(3):245-255(2001). XX DR MD5; 0d34fc8b4c1b94e0d9200925b6b2de9a. DR EuropePMC; PMC2832772; 20100346. XX FH Key Location/Qualifiers FH FT source 1..2401 FT /organism="Human astrovirus 1" FT /isolate="O-28" FT /serotype="3" FT /mol_type="genomic RNA" FT /note="synonym: Human astrovirus type 1" FT /db_xref="taxon:12456" FT CDS 12..2399 FT /codon_start=1 FT /product="outer capsid protein" FT /db_xref="GOA:Q14V13" FT /db_xref="InterPro:IPR004337" FT /db_xref="InterPro:IPR022027" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q14V13" FT /protein_id="BAE97456.1" FT /translation="MASKSDKQVTVEVKNNNNGRNRSRSRARSQSRGRGKSVKITVNSR FT SRGRRQNGRDKYQSNQRVRNIVTKQLRKQGVTGPKPAICQRATATLGTIGSNTSGTTEI FT EACILLNPVLVKDATGSTQFGPVQALGAQYSMWKLKYLNVKLTSMVGASAVNGTVVRVS FT LNPTSTPSSTSWSGLGARKHLDVTVGKNAVFKLKPADLGGPRDGWWLTNTNDNASDTLG FT PSVEIHTLGMTMSSYKNEQFTGGLFLVELASEWCFTGYAANPNLVNLVKSTDKQVNVTF FT EGSNGTPLIMKVPEASHFARTAVARSSLPTTLARAGQNTTSDTVWQVLNTAVSAAELVT FT PPPFNWLVKGGWWFVKLIAGRARTGTRSFYVYPSYQDALSNKPALCTGSAPSGMRTRAA FT VMTTLQFTQMNQPSLGHGEMTATLGRAIPSPGDTFNVVLTIGQPLAPNTLTKQNWLNKT FT TVSPQNHHVVKIAKDVNNYTTMQGFTPISSVDWYTTDFQPSEEPTPIPGLQVLVNSSKK FT ADVYAIQQYLNNQTNNKVQLTSIFLVKVTTSFQVKQLFGAISTGAMELVLLLENLKVRS FT DTTAQDVNFPVGWYLMTNTAIFNAPAPPGWIWQNVELLNDTAYFIDQGMMHLIMPPPAN FT TQLLFEMRTSITGSRSMISSEEPDTHEPGDEWCDALDASDSRVLLEETDYEDEEDEDED FT DEADRFDLHSSYGSEPEDDDENNRVTLLSTLINQGMTVERATRITKRAFPTSADKTKRS FT VYMDLLASGLSPGNAWSHACEEARIMGTNQMPNVSGDRGHAE" XX SQ Sequence 2401 BP; 697 A; 552 C; 568 G; 584 T; 0 other; aaagaagtgt gatggctagc aagtctgata agcaagtcac tgttgaggtc aaaaataaca 60 acaatggccg aaacaggagc agatctaggg cccggtctca gtctagaggc cgtggcaagt 120 cagtcaaaat tacagtcaat tccaggagta gaggtagaag acaaaacgga cgcgacaaat 180 atcagtctaa tcaacgtgtc cgtaacattg tcactaaaca actcaggaaa cagggtgtca 240 caggacctaa accagcaatt tgccaacgtg ccacagcaac acttgggaca atcggctcaa 300 acaccagtgg aacgacggag atcgaggcgt gtatactcct taatcccgtc cttgttaagg 360 atgctactgg gagtactcaa tttgggccag tgcaggcgct aggggcacaa tattctatgt 420 ggaaattgaa gtacttaaat gtgaaattga catcaatggt tggtgcatca gccgttaatg 480 gtacagttgt aagggtttct ctcaatccaa cctcaacgcc ttcatctacg agctggtctg 540 ggcttggcgc tcgtaaacat cttgatgtga ctgttgggaa aaacgctgtc tttaaactta 600 aaccagccga cctgggtggg cccagagatg ggtggtggtt gactaacaca aatgacaatg 660 cttcagacac actagggccc tctgttgaaa tacatactct tggcatgaca atgtcctcat 720 ataaaaatga gcaatttaca ggggggcttt tcctagttga attggcctca gagtggtgct 780 ttacaggtta tgcagccaac cctaacctgg tgaaccttgt gaagtcaact gacaaacaag 840 ttaatgtaac ttttgaaggt tctaatggta cgccacttat aatgaaggtt ccagaagcaa 900 gccattttgc caggactgcc gtagcgcgtt cctcattacc taccaccttg gctagggctg 960 gacaaaacac cacctctgac accgtctggc aagttttgaa cactgctgtc tcagctgcag 1020 agctggtaac accgccgcca tttaactggc ttgttaaggg tggctggtgg tttgtgaagc 1080 ttatagcagg aagagctaga actggaacac gtagtttcta cgtctatcct agctatcagg 1140 atgccctctc aaataaacca gctctatgca ctggcagtgc gccaagtggt atgaggacac 1200 gcgcagcagt aatgacaacg ctgcaattca cacaaatgaa ccagcccagt cttggacatg 1260 gagagatgac cgccactcta ggtagagcca taccatctcc tggtgacacg tttaatgttg 1320 tgttgaccat tggccagcca ttggctccaa acacattgac aaaacagaat tggctgaata 1380 aaacaacagt gtcgccacaa aaccatcatg tggtgaaaat tgctaaagat gtgaataact 1440 acaccactat gcagggcttc acacctatta gctctgttga ttggtacact acagattttc 1500 agccatcaga ggagcccact cccatacctg ggttgcaggt gctggttaat agttctaaga 1560 aggctgatgt ttatgccata caacagtact taaataacca gacaaataat aaagtacaac 1620 tcactagcat ttttctggtt aaagtcacta ccagtttcca ggttaaacaa ctatttggag 1680 ctatttctac aggagctatg gaactggtac tactgttgga aaatctgaag gtgcgttcag 1740 acactactgc acaggatgtt aactttcctg ttggttggta cctcatgacc aatacggcca 1800 tatttaacgc acccgcacca cctggatgga tttggcagaa tgttgagctt ctgaatgata 1860 cagcttactt cattgaccag ggtatgatgc acctcattat gccacctcct gcaaacactc 1920 agttgctgtt tgagatgcgc acttccatta caggatccag gtctatgatc tctagtgagg 1980 aacctgacac ccatgaacct ggtgatgaat ggtgcgacgc actcgatgca agtgactctc 2040 gagtgttgtt ggaagagaca gattatgaag atgaggaaga cgaggacgaa gacgatgaag 2100 cggacaggtt tgatcttcat agttcttatg gctcggaacc tgaggatgat gatgaaaata 2160 accgtgtaac cctcctctct acactcataa atcaaggaat gacagtggag cgcgcaacaa 2220 ggatcaccaa acgtgcgttc cccactagcg ctgataaaac aaagcgcagt gtatacatgg 2280 acctgcttgc atctggtctt tcaccaggca atgcatggtc acatgcgtgc gaagaggcac 2340 gcatcatggg caccaatcaa atgcctaatg tttctggaga ccgcggccac gccgagtagg 2400 a 2401 // ID AB000295; SV 1; linear; genomic RNA; STD; VRL; 2401 BP. XX AC AB000295; XX DT 07-JUL-2006 (Rel. 88, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 2) XX DE Human astrovirus 1 gene for outer capsid protein, complete cds, isolate: DE O-35. XX KW . XX OS Human astrovirus 1 OC Viruses; Riboviria; Astroviridae; Mamastrovirus. XX RN [1] RP 1-2401 RA Ushijima H., Kakizawa J., Leying W.; RT ; RL Submitted (08-JAN-1997) to the INSDC. RL Hiroshi Ushijima, Aino University, Aino Health Research Center; Shibuya RL Toho Building 4F, 2-17-3 Shibuya, Shibuya-ku, Tokyo 150-0002, Japan RL (E-mail:ushijima-hiroshi@jcom.home.ne.jp, Tel:81-3-3486-8481, RL Fax:81-3-3486-8481) XX RN [2] RX DOI; 10.1002/jmv.1043. RX PUBMED; 11424111. RA Wang Q.H., Kakizawa J., Wen L.Y., Shimizu M., Nishio O., Fang Z.Y., RA Ushijima H.; RT "Genetic analysis of the capsid region of astroviruses"; RL J. Med. Virol. 64(3):245-255(2001). XX DR MD5; e90aac04ffc6f51cacdaff0d5ef40558. DR EuropePMC; PMC2832772; 20100346. DR EuropePMC; PMC4102142; 20507741. XX FH Key Location/Qualifiers FH FT source 1..2401 FT /organism="Human astrovirus 1" FT /isolate="O-35" FT /serotype="3" FT /mol_type="genomic RNA" FT /note="synonym: Human astrovirus type 1" FT /db_xref="taxon:12456" FT CDS 12..2399 FT /codon_start=1 FT /product="outer capsid protein" FT /db_xref="GOA:Q14V12" FT /db_xref="InterPro:IPR004337" FT /db_xref="InterPro:IPR022027" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q14V12" FT /protein_id="BAE97457.1" FT /translation="MASKSDKQVTVEVKNNNNGRNRSRSRARSQSRGRGRSVKITVNSR FT SRGRRQNGRDKYQSNQRVRNIVTKQLTKQGVTGPKPAICQRATATLGTIGSNTSGTTEI FT EACILLNPVLVKDATGSTQFGPVQALGAQYSMWKLKYLNVKLTSMVGASAVNGTVVRVS FT LNPTSTPSSTSWSGLGARKHLDVTVGKNAVFKLKPADLGGPRDGWWLTHTNDNASDTLG FT PSVEIHTLGMTMSSYKNEQFTGGLFLVELASEWCFTGYAANPNLVNLVKSTDKQVNVTF FT EGSNGTPLIMKVPEASHFPRTAVARSSLPTTLARAGQNTTSDTVWQVLNTAVSAAELVT FT PPPFNWLVKGGWWFVKLIAGRARTGTRSFYVYPSYQDALSNKPALCTGSAPSGMRTRAA FT VMTTLQFTQMNQPSPGHGEMTATLGRAIPSPGDTFNVVLTIGQPLAPNTLTKQNWLNKT FT TVSPQNHHVVKIAKDVNNYTTMQGFTPISSVDWYTTDFQPSEEPTPIPGLQVLVNSSKK FT ADVYAIQQYLNNQTNNKVQLTSIFLVKVTTSFQVNQLFGAISTGAMELVLLLENLKVRS FT DTTAQDVNFPVGWYLMTNTAIFNAPAPPGWIWQNVELLNDTAYFIDQGMMHLIMPPPAN FT TQLLFEMRTSITGSRSMISSEEPDTHEPGEEWCDALDASDSRVLLEETDYEDEEDEDED FT DEADRFDLHSSYGSEPEDDDENNRVTLLSTLINQGMTVERATRITKRAFPTSADKTKRS FT VYMDLLASGLSPGNAWSHACEEARIMGTNQMPNVSGDRGHAE" XX SQ Sequence 2401 BP; 697 A; 558 C; 566 G; 580 T; 0 other; aaagaagtgt gatggctagc aagtctgata agcaagtcac tgttgaggtc aaaaataaca 60 acaatggccg aaacaggagc agatctaggg cccggtctca gtctagaggc cgtggcaggt 120 cagtcaaaat tacagtcaat tccaggagta gaggtagaag acaaaacgga cgcgacaaat 180 atcagtctaa tcaacgtgtc cgtaacattg tcactaaaca actcacgaaa cagggtgtca 240 caggaccaaa accagcaata tgccaacgtg ccacagcaac acttgggaca atcggctcaa 300 acaccagtgg aacgacggag atcgaggcgt gtatactcct taatcccgtc cttgttaagg 360 atgctactgg gagtactcaa tttgggccag tgcaggcgct aggggcacaa tattctatgt 420 ggaaattgaa gtacttaaat gtgaaattga catcaatggt tggtgcatca gccgttaatg 480 gtacagttgt aagggtttct ctcaatccaa cctcaacgcc ttcatctacg agctggtctg 540 ggcttggcgc tcgtaaacat cttgatgtga ctgttgggaa aaacgctgtc tttaaactta 600 aaccagccga cctgggtggg cccagagatg gctggtggtt gactcacaca aatgacaatg 660 cttcagacac actagggccc tctgttgaaa tacatactct tggcatgaca atgtcctcat 720 ataaaaatga gcaatttaca ggggggcttt tcctagttga attggcctca gagtggtgct 780 ttacaggtta tgcagccaac cctaacctgg tgaaccttgt gaagtcaact gacaaacaag 840 ttaatgtaac ttttgaaggt tctaatggta cgccacttat aatgaaggtt ccagaagcaa 900 gccattttcc caggactgcc gtagcgcgtt cctcattacc taccaccttg gctagggctg 960 gacaaaacac cacctctgac accgtctggc aagttttgaa cactgctgtc tcagctgcag 1020 agctggtaac accgccgcca tttaactggc ttgttaaggg tggctggtgg tttgtgaagc 1080 ttatagcagg aagagctaga actggaacac gtagtttcta cgtctatcct agctatcagg 1140 atgccctctc aaataaacca gctctatgca ctggcagtgc gccaagtggt atgaggacac 1200 gcgcagcagt aatgacaacg ctgcaattca cacaaatgaa ccagcccagt cctggacatg 1260 gagagatgac cgccactcta ggtagagcca taccatctcc tggtgacacg tttaatgttg 1320 tgttgaccat tggccagcca ttggctccaa acacattgac aaaacagaat tggctgaata 1380 aaacaacagt gtcgccacaa aaccatcatg tggtgaaaat tgctaaagat gtgaataact 1440 acaccactat gcagggcttc acacctatta gctctgttga ttggtacact acagattttc 1500 agccatcaga ggagcccact cccatacctg ggttgcaggt gctggttaat agttctaaga 1560 aggctgatgt ttatgccata caacagtact taaataacca gacaaataat aaagtacaac 1620 tcactagcat ttttctggtt aaagtcacta ccagtttcca ggttaaccaa ctatttggag 1680 ctatttctac aggagctatg gaactggtac tactgttgga aaatctgaag gtgcgttcag 1740 acactactgc acaggatgtt aacttccctg ttggttggta cctcatgacc aatacggcca 1800 tatttaacgc acccgcacca cctggatgga tttggcagaa tgttgagctt ctgaatgata 1860 cagcttactt cattgaccag ggtatgatgc acctcattat gccacctcct gcaaacactc 1920 agttgctgtt tgagatgcgc acttccatta caggatccag gtctatgatc tctagtgagg 1980 aacctgacac ccatgaacct ggtgaagaat ggtgcgacgc actcgatgca agtgactctc 2040 gagtgttgtt ggaagagaca gattatgaag atgaggaaga cgaggacgaa gacgatgaag 2100 cggacaggtt tgatcttcat agttcttatg gttcggaacc tgaggatgat gatgaaaata 2160 accgtgtaac cctcctctct acactcataa atcaaggaat gacagtggag cgcgcaacaa 2220 ggatcaccaa acgtgcgttc cccactagcg ctgataaaac aaagcgcagt gtatacatgg 2280 acctgcttgc atctggtctt tcaccaggca atgcatggtc acatgcgtgc gaagaggcac 2340 gcatcatggg caccaatcaa atgcctaatg tttctggaga ccgcggccac gccgagtagg 2400 a 2401 // ID AB000296; SV 1; linear; genomic RNA; STD; VRL; 2335 BP. XX AC AB000296; XX DT 07-JUL-2006 (Rel. 88, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 2) XX DE Human astrovirus 1 gene for outer capsid protein, complete cds, isolate: S4 DE standard. XX KW . XX OS Human astrovirus 1 OC Viruses; Riboviria; Astroviridae; Mamastrovirus. XX RN [1] RP 1-2335 RA Ushijima H., Kakizawa J., Leying W.; RT ; RL Submitted (08-JAN-1997) to the INSDC. RL Hiroshi Ushijima, Aino University, Aino Health Research Center; Shibuya RL Toho Building 4F, 2-17-3 Shibuya, Shibuya-ku, Tokyo 150-0002, Japan RL (E-mail:ushijima-hiroshi@jcom.home.ne.jp, Tel:81-3-3486-8481, RL Fax:81-3-3486-8481) XX RN [2] RX DOI; 10.1002/jmv.1043. RX PUBMED; 11424111. RA Wang Q.H., Kakizawa J., Wen L.Y., Shimizu M., Nishio O., Fang Z.Y., RA Ushijima H.; RT "Genetic analysis of the capsid region of astroviruses"; RL J. Med. Virol. 64(3):245-255(2001). XX DR MD5; 6db8f982701a6635701ff7218a099a6c. DR EuropePMC; PMC2832772; 20100346. XX FH Key Location/Qualifiers FH FT source 1..2335 FT /organism="Human astrovirus 1" FT /isolate="S4 standard" FT /serotype="4" FT /mol_type="genomic RNA" FT /note="synonym: Human astrovirus type 1" FT /db_xref="taxon:12456" FT CDS 12..2333 FT /codon_start=1 FT /product="outer capsid protein" FT /db_xref="GOA:Q14V11" FT /db_xref="InterPro:IPR004337" FT /db_xref="InterPro:IPR022027" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q14V11" FT /protein_id="BAE97458.1" FT /translation="MASKSHKEVTVEVSSTGRSRSKSRARSQSRGRGRSVKITVNSHNK FT GRRQNGRNKYQSNQRVRKIVNKQLRKPSFTGPKPCICETATATLGTIGSNTTGATEIEA FT CILLNPVLVKDATGSTQFGPVQALGAQYSMWKLKYLNVRLTSMVGASAVNGTVVRISLN FT PTSTPSSTSWSGLGARKHLDVTVGKNALFKLKPPDLGGPRDGWWLTNTIDNASDTLGPS FT IEIHTFGQTMSSYQNTQFTGGLFWGELASAWCFTGYAANPNLVNLVKSTDNGVDVTFEG FT SAGTPLIMNVPEHSHFARMAVEHSSLSTSLSRVGGESSSDTVWQVLNTAVSAAELVTPP FT PFNWLVKGGWWFVKLIVGRARTGARRFYVYPSYQDALSNKPALWTGGVSAYTRQSTPVR FT TTLQFTQMNQPSLGHGATPATLGQSVPEPGDQFKVIMAVGALVQPNRSDTQIWLFKTVT FT PPTGHDAARVGWKTQHYLTKQGFLLIDSLEWLTPNLQDSQEPPSIPELGVYVGIHKKAL FT VYFMQQYVNPHTNNKHQVSSIFLIKPTENFSVTNYMSYFFRVSQSGQNVANLEIRPQTW FT QQTVNFQRGKWYLVTNTAIRNGPPPSGWVLDHIELPNESIYYADQVLAHLINPPPQNSK FT IYFEVHTTMPQSSVRNIGLEEDQTDNWQEPDEDVQTSTEESDYETDSLEDDLMMKTLIH FT AESLLLTLLLTRASAGSVLRILVCQHIPMLSGEVVNNQQASTSRKFPQMLLAQEHTIRV FT YVSANNSRSIKLSGDRGHAE" XX SQ Sequence 2335 BP; 680 A; 543 C; 541 G; 571 T; 0 other; ggagaagtgt gatggctagc aagtctcaca aggaagtcac tgtggaggtc agttcaactg 60 gtcgaagcag gagcaaatcc agagctcgat cacaatctag aggtcggggt agatcagtca 120 aaattacagt caattcccat aacaaaggca gaagacagaa cggacgcaac aaatatcaat 180 ctaatcaacg tgtccgtaaa attgtcaata aacaactcag gaaaccaagt ttcacaggac 240 caaaaccttg catttgcgaa acagccaccg caacacttgg aacaattgga tcaaatacca 300 caggagcaac agaaattgag gcgtgcatcc tccttaatcc agtcttggtt aaggacgcta 360 ctgggagtac tcagtttggc ccggtgcaag cgctaggagc gcagtattca atgtggaagc 420 ttaaatacct caatgttagg ttaacatcta tggtgggtgc ctcagcagtc aatggtaccg 480 tagtgaggat atcacttaac ccaacttcca ctccttcttc tacgagctgg tctgggcttg 540 gggcgcgtaa acatctagat gttactgtgg gtaaaaatgc actctttaaa ttaaagcctc 600 ctgatttggg tggacctcga gatgggtggt ggttaacaaa cacaattgat aatgcttcag 660 acacacttgg cccatctatt gaaatacata catttggtca aactatgtca tcttaccaga 720 atacacaatt tacaggaggc ttattttggg gggagcttgc ttctgcatgg tgcttcacag 780 gatatgcagc aaacccaaat ttagttaatc tagtaaaatc tacagacaat ggtgttgatg 840 tcacttttga gggttcagct ggaacaccac ttatcatgaa tgtacctgag cacagccatt 900 ttgcgagaat ggcagtggaa cattcctccc tgtccacttc cctttctagg gtcggtggcg 960 agtcatcatc tgacactgtt tggcaagttt tgaacacagc tgtttcagca gccgagcttg 1020 ttactccacc gccattcaac tggctggtca aaggcggctg gtggtttgtc aagcttatcg 1080 ttgggcgcgc tcgcactggt gcgcgcaggt tctatgttta tcctagctac caggatgctc 1140 tatctaataa gcctgccctt tggaccggcg gagtgtctgc ttacaccaga cagagcactc 1200 cagtgcgcac cacacttcag ttcacacaaa tgaatcaacc tagtcttggt catggtgcca 1260 ctccagcaac attgggccaa tccgtcccag aacctggtga ccagttcaaa gtaatcatgg 1320 ctgttggcgc actagtgcag cccaacaggt ctgataccca gatttggttg ttcaaaacag 1380 tcaccccacc tacaggacat gatgctgcca gagttggctg gaaaacacag cattatttga 1440 ccaaacaagg ctttcttctc atagatagcc tggagtggtt aacacctaac ttacaggatt 1500 ctcaagaacc accatcgatc ccagagttgg gtgtctatgt tggcatacat aagaaagcat 1560 tagtgtattt catgcagcag tatgtgaacc cgcataccaa taacaaacac caggtctcca 1620 gcattttcct gataaagcca actgaaaact tcagtgtcac aaattacatg agttactttt 1680 tcagagtaag ccaaagtggc cagaatgtgg caaatttgga aatacgccca cagacatggc 1740 agcaaacagt gaatttccaa cgtgggaagt ggtatctggt cacaaatact gccattagga 1800 atggaccacc tccatcaggg tgggttttgg accacataga gctacccaat gagagcatat 1860 attatgctga ccaggtcttg gcccacttaa taaacccacc cccacagaac tccaagatct 1920 attttgaagt gcacacaaca atgccccagt cgagtgtaag aaatattggg cttgaggagg 1980 atcaaactga caactggcaa gaaccagatg aggatgtcca gacctcgact gaagagagtg 2040 actatgagac agattctcta gaggatgatc tgatgatgaa gactctaata catgcagaga 2100 gcttgttatt aacactcttg ttaaccaggg catcagcagg gagcgtgcta cgtatattgg 2160 tatgtcagca tatcccaatg ttgagtgggg aagtggtgaa caatcaacaa gccagcacat 2220 ccaggaaatt tcctcagatg ttgttggcgc aggagcacac tattcgtgtg tatgtgagcg 2280 caaacaacag tcgctcaatc aaactttctg gagaccgcgg ccacgccgag tagga 2335 // ID AB000297; SV 1; linear; genomic RNA; STD; VRL; 2404 BP. XX AC AB000297; XX DT 07-JUL-2006 (Rel. 88, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 2) XX DE Human astrovirus 1 gene for outer capsid protein, complete cds, isolate: S5 DE standard. XX KW . XX OS Human astrovirus 1 OC Viruses; Riboviria; Astroviridae; Mamastrovirus. XX RN [1] RP 1-2404 RA Ushijima H., Kakizawa J., Leying W.; RT ; RL Submitted (08-JAN-1997) to the INSDC. RL Hiroshi Ushijima, Aino University, Aino Health Research Center; Shibuya RL Toho Building 4F, 2-17-3 Shibuya, Shibuya-ku, Tokyo 150-0002, Japan RL (E-mail:ushijima-hiroshi@jcom.home.ne.jp, Tel:81-3-3486-8481, RL Fax:81-3-3486-8481) XX RN [2] RX DOI; 10.1002/jmv.1043. RX PUBMED; 11424111. RA Wang Q.H., Kakizawa J., Wen L.Y., Shimizu M., Nishio O., Fang Z.Y., RA Ushijima H.; RT "Genetic analysis of the capsid region of astroviruses"; RL J. Med. Virol. 64(3):245-255(2001). XX DR MD5; 60976e41315177962efa0a4d9e7ee630. DR EuropePMC; PMC2832772; 20100346. XX FH Key Location/Qualifiers FH FT source 1..2404 FT /organism="Human astrovirus 1" FT /isolate="S5 standard" FT /serotype="5" FT /mol_type="genomic RNA" FT /note="synonym: Human astrovirus type 1" FT /db_xref="taxon:12456" FT CDS 12..2402 FT /codon_start=1 FT /product="outer capsid protein" FT /db_xref="GOA:Q14V10" FT /db_xref="InterPro:IPR004337" FT /db_xref="InterPro:IPR022027" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q14V10" FT /protein_id="BAE97459.1" FT /translation="MASKPSKQVTVEVNNGRSRSRSRPRSQSRGRDKSVKITVNSRNKG FT GGQNGRNKHQSNQRVRNIVSKQLKKQVSTGPKPAICQGATATLGTVGSHPSGTTEIEAC FT ILLNPVLVKDATGSTQFGPVQALGAQYSMWKLKYLNVKLTSMVGSSAVNGTVVRVSLNP FT TSTPSSTSWSGLGARKHLDVTVGKNAVFKLKPADLGGPRDGWWLTNTNDNASDTLGPSI FT EIHTLGRTMSSYQNQQFTGGLFLVELALSGGFTGYAANPNLVNLMKSTDKQVNVTFNGS FT AGEPLVMSVPATSHFVRAVVARSTLPTSLARAGERTTSDTVWQVLNTAVSAAELVTPPP FT FNWLVKGGWWFVKLIAGRTRNGTRQFYVYPSYQDALSYKPALCTGGLPSGLRATSAVTT FT TLQFTQMNQPSLGHGENTATLGRSIATAGDRLKVILTVGQPVTPNENNKQNWVGKTNTP FT AEEVIKIGVNTQSYNVMNGLTMQGFMHIKTVECMISSIDWYDEEMQPLEVPAPMSELLV FT MKGINKKADVYAAQQYKNSISNNKHQITSVYLIRVKENFQVTNHLSYFFREKVDTTATE FT LMKIRPQTYHTTVNFVQNNWYLLTSTVLHTGSLPSGWVWMNQELMNNENYIVDQGMKHL FT MTTPPVSSQLYFEMLTSLPQAKAEYLDQGDQAVVTYDSPGQALFSAEETDSDFESTEDE FT TDEVDRFDLHLSSESDDDDADENNRVTLLSTLINQGMSVERATKITSNAFPTRADRLRR FT SVYNDLLVSGLGPDAAWSHACEQARKVGDNLTYKLSGSRGHAE" XX SQ Sequence 2404 BP; 710 A; 554 C; 574 G; 566 T; 0 other; aaaggagtgt gatggctagc aagcccagca aacaggtcac tgttgaggtc aataatggcc 60 gaagcaggag cagatctaga cctcgatccc aatccagagg ccgagataaa tcagtcaaga 120 ttacggttaa ttccagaaac aaaggtggag gacaaaacgg acgcaacaaa catcagtcta 180 atcaacgtgt ccgtaacatt gtcagtaaac agctcaagaa acaggtttcc acaggaccaa 240 aaccagcaat atgtcaggga gccacagcaa cgctcggaac tgtcgggtcc caccccagtg 300 gaacaaccga gattgaggcg tgtattctcc tcaatccggt actggttaag gatgctacag 360 ggagtactca atttgggcca gtgcaagcgc taggagcgca atattcaatg tggaagctta 420 aatatcttaa tgtaaagctt acctctatgg ttgggtcctc tgcagtcaat ggcactgtag 480 taagagtgtc tttaaatcca acatctacac cttcttccac tagctggtct ggcttgggag 540 ctaggaaaca tctcgatgtg acagtgggta agaatgctgt gttcaagttg aaaccagctg 600 atctgggcgg acctagagat ggttggtggt taacaaacac caacgacaat gcttctgaca 660 ccctgggccc ttcaatagag attcacacct tgggtagaac tatgtcatcc taccaaaacc 720 agcaatttac tggagggctg tttcttgtgg agctggctct gagtgggggc tttacaggct 780 atgctgcaaa tccaaacctt gtcaacttaa tgaagtcgac cgacaaacag gtcaatgtca 840 ccttcaatgg ctcagctggg gaaccactgg ttatgagtgt acctgcaaca agccactttg 900 ttcgcgcagt tgtagctaga tcaacactgc cgacgtcctt agcacgggct ggggagagaa 960 caacatctga cactgtctgg caggtactta acaccgccgt gtctgccgct gaattagtca 1020 ctcccccacc attcaattgg ctggtcaaag gtggatggtg gtttgttaag ctgattgcag 1080 gtagaacaag gaatggtaca cggcagtttt atgtgtatcc aagctatcag gatgcactgt 1140 cttataagcc agccctttgc actggtgggt tgccaagtgg gctgagagca acatctgcag 1200 tcaccacaac tttgcagttc acccagatga atcaacccag cctcggacat ggagaaaaca 1260 cagcaacgtt gggtaggtct attgctacag ctggcgaccg tcttaaagta attctcactg 1320 tgggtcagcc agtaacaccc aatgaaaaca acaaacaaaa ctgggttggg aagacaaaca 1380 cacctgctga agaagttatt aaaataggtg taaacactca gagctacaat gtcatgaatg 1440 gtttgaccat gcaagggttt atgcatataa agacagtaga gtgcatgata tccagtatag 1500 actggtatga tgaggaaatg cagcccctgg aggtccctgc gccgatgtct gagctactag 1560 tcatgaaagg catcaacaag aaggcagacg tgtatgcagc acagcaatac aagaattcta 1620 tcagtaacaa taagcaccag ataactagtg tctacctgat tagagtcaag gaaaacttcc 1680 aggtcactaa ccatttaagc tacttcttta gagagaaagt tgataccact gcaactgaac 1740 ttatgaagat taggcctcaa acataccata caactgttaa ttttgtccag aataattggt 1800 atctcttgac tagtacagtc ttgcatactg gatcccttcc atccggctgg gtttggatga 1860 accaggaact catgaataat gagaactaca ttgttgacca gggcatgaag catcttatga 1920 ctacaccacc agtatcatcc cagctttact ttgagatgct tacttctttg ccacaggcta 1980 aggcagaata ccttgaccaa ggtgatcaag cagtagtaac ttatgatagc cctggacaag 2040 cgctatttag tgctgaagag acagatagtg actttgagag taccgaggac gaaaccgatg 2100 aagtggacag gtttgatctc catctctctt ctgagtcaga tgatgatgat gctgatgaga 2160 acaaccgtgt aaccctcctc tctactctca ttaaccaagg aatgtcagtg gagcgcgcca 2220 caaaaatcac cagtaacgcg ttcccaacac gcgccgatag attgaggcgc agtgtttaca 2280 atgacctgtt ggtttctggc cttggcccag atgcagcatg gtcccatgcg tgtgagcaag 2340 cacgcaaagt aggcgataat ctcacctaca aactttcagg aagccgcggc cacgccgagt 2400 agga 2404 // ID AB000298; SV 1; linear; genomic RNA; STD; VRL; 2367 BP. XX AC AB000298; XX DT 07-JUL-2006 (Rel. 88, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 2) XX DE Human astrovirus 1 gene for outer capsid protein, complete cds, isolate: DE O-1. XX KW . XX OS Human astrovirus 1 OC Viruses; Riboviria; Astroviridae; Mamastrovirus. XX RN [1] RP 1-2367 RA Ushijima H., Kakizawa J., Leying W.; RT ; RL Submitted (08-JAN-1997) to the INSDC. RL Hiroshi Ushijima, Aino University, Aino Health Research Center; Shibuya RL Toho Building 4F, 2-17-3 Shibuya, Shibuya-ku, Tokyo 150-0002, Japan RL (E-mail:ushijima-hiroshi@jcom.home.ne.jp, Tel:81-3-3486-8481, RL Fax:81-3-3486-8481) XX RN [2] RX DOI; 10.1002/jmv.1043. RX PUBMED; 11424111. RA Wang Q.H., Kakizawa J., Wen L.Y., Shimizu M., Nishio O., Fang Z.Y., RA Ushijima H.; RT "Genetic analysis of the capsid region of astroviruses"; RL J. Med. Virol. 64(3):245-255(2001). XX DR MD5; 7aa8c4beda27acf4def2cb854d0fb84f. DR EuropePMC; PMC2832772; 20100346. XX FH Key Location/Qualifiers FH FT source 1..2367 FT /organism="Human astrovirus 1" FT /isolate="O-1" FT /serotype="5" FT /mol_type="genomic RNA" FT /note="synonym: Human astrovirus type 1" FT /db_xref="taxon:12456" FT CDS 12..2363 FT /codon_start=1 FT /product="outer capsid protein" FT /db_xref="GOA:Q14V09" FT /db_xref="InterPro:IPR004337" FT /db_xref="InterPro:IPR022027" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q14V09" FT /protein_id="BAE97460.1" FT /translation="MASKPSKQVTVEVNNGRSRSRSRPRSQSRGRDKSVKITVNSRNKG FT RRQTGRNKHQSNQRVRNIVNKQLRKQGVTGPKPAICQRATATLGTVGSNTSGTTEIEAC FT ILLNPVLVKDATGSTQFGPVQALGAQYSMWKLKYLNVKLTSMVGSSAVNGTVVRVSLNP FT TSTPSSTSWSGLGARKHLDVTVGKNAVFKLKPADLGGPRDGWWLTNTNDNASDTLGPSI FT EIHTLGRTMSSYQNQQFTGGLFLVELASEWCFTGYAANPNLVNLMKSTDKQVNVTFNGS FT AGEPLVMSVPATSHFVRAVVARSTLPTSLARAGERTTSDTVWQVLNTAVSAAELVTPPP FT FNWLVKGGWWFVKLIAGRTRNGTRSFYVYPSYQDALSNKPALCTGGLPSGLRAASAVTT FT TLQFTQMNQPSLGHGENTATLGRSIATAGDRLKVILTVGQPVAPNESNKQNWVGKTNTP FT TEEIIKIGVNTQSYNVMNGFTMISSVDWYDEEMQPLEVPAPMPELLVMKGINKKADVYA FT AQQYKNSISNNKHQIPSVYLIRVKEEFQVTNHLSYFFREKVDTTATELMKIRPQTYHTS FT INFVQNNWYLLTSTVLHTGSLPSGWVWMNQELMNNENYIVDQGMKHLMTTPPVSSQLYP FT EMLTSLPQAMAEHLEQSDQAAVAHDSPGQAQFSAEETDSDFESTEDETDEVDRFDLHLS FT SESDDDDVENNRVTLLSTLINQGMSVERATRITSNAFPTRAARLRRSVYNDLLVSGLGP FT DAAWSHACEQARKVGDNHDLQVSGSRGHAE" XX SQ Sequence 2367 BP; 706 A; 544 C; 556 G; 561 T; 0 other; aaaggagtgt gatggctagc aagcccagca aacaggtaac tgttgaggtc aataatggcc 60 gaagcaggag cagatctagg cctcgatccc aatccagagg ccgagacaaa tcagtcaaaa 120 ttacggttaa ttccagaaac aaaggtagaa gacaaaccgg acgcaacaaa catcaatcta 180 atcaacgtgt ccgtaacatt gtcaataaac aactcaggaa acagggtgtc acaggaccaa 240 aaccagcaat atgtcaacga gcaacagcaa cactcggaac tgtcgggtcc aacacaagtg 300 gaacaaccga gattgaggcg tgtattctcc tcaatccggt acttgttaag gatgctacag 360 ggagtactca atttgggcca gtgcaagcgc taggagcgca gtattcaatg tggaagctta 420 aatatcttaa tgtaaagctt acctctatgg ttggatcctc tgcagtcaat ggcactgtag 480 taagagtgtc tttgaatcca acatcaacac cttcttctac tagctggtcc ggcttgggag 540 ctcggaagca tcttgacgtg acagttggca agaatgctgt gtttaagttg aaaccagctg 600 atctgggtgg ccctagagat gggtggtggc taacaaatac caatgacaat gcttctgata 660 ccctgggccc ctcaatagag attcacacct tgggtagaac tatgtcatcc taccaaaacc 720 agcaatttac tggagggctg tttcttgtgg agcttgcctc tgagtggtgc tttacaggct 780 atgctgcaaa tccaaacctt gtcaacttaa tgaagtcgac cgacaaacag gtcaatgtca 840 cctttaatgg ctcagctgga gagccactgg ttatgagtgt acctgcaaca agccactttg 900 ttcgcgcagt cgtggctagg tcaacactgc caacgtcctt agcacgagct ggggagagaa 960 caacatctga taccgtttgg caggtgctta acaccgccgt gtctgccgct gaattggtca 1020 ctcccccacc attcaattgg ttagttaaag gtggatggtg gtttgttaag ctgattgcag 1080 gtagaacaag gaatggtacg cgcagtttct atgtgtatcc aagctatcag gatgcactgt 1140 ctaataagcc agccctttgc accggtgggc ttccaagtgg gttgagagca gcatccgcag 1200 ttaccacaac tttgcagttc acccagatga atcagcccag ccttggacat ggagaaaaca 1260 cagcaacgtt gggtaggtct attgctacgg ctggcgaccg tcttaaagta atcctcactg 1320 tgggtcagcc agtagcaccc aatgaaagca acaaacaaaa ctgggttggt aagacaaata 1380 cacctactga agaaatcatt aaaataggtg taaacactca gagctacaat gtcatgaatg 1440 gtttcaccat gatatctagt gtagactggt atgatgagga aatgcaaccc ctggaggtcc 1500 ctgcaccgat gcctgagcta ctagtcatga aaggcatcaa taagaaggca gatgtgtatg 1560 cagcacagca atacaagaac tctatcagta ataataagca ccagatacct agtgtctacc 1620 tgattagagt caaggaagaa ttccaggtaa ctaatcattt aagctatttc tttagagaga 1680 aagttgatac caccgcaact gaacttatga agattaggcc tcaaacatac catacatcta 1740 ttaattttgt ccagaataat tggtatctct tgactagtac agttttgcac actggatccc 1800 ttccatctgg atgggtttgg atgaaccaag aactcatgaa taatgagaac tacattgttg 1860 accagggcat gaagcatctt atgacaacac caccagtatc atcccaactt tatccagaga 1920 tgcttacctc tttgccacag gctatggcag aacaccttga acaaagtgat caagcagcag 1980 tagctcatga tagccctgga caagcacaat ttagtgctga agagacagat agtgacttcg 2040 agagtacaga ggacgaaacc gatgaagtgg acaggtttga tctccatctc tcttctgagt 2100 cagatgatga tgatgtcgag aacaaccgtg taaccctcct ctctactctc attaatcaag 2160 gaatgtcagt ggagcgcgcc acaaggatca ccagcaacgc gttcccaaca cgcgccgcta 2220 gattgaggcg cagtgtttac aatgacctgt tggtttctgg tcttggtcca gatgcagcat 2280 ggtcccatgc gtgtgaacaa gcacgcaaag taggcgataa tcatgaccta caagtttcag 2340 gaagccgcgg ccacgccgag taggatc 2367 // ID AB000299; SV 1; linear; genomic RNA; STD; VRL; 2383 BP. XX AC AB000299; XX DT 07-JUL-2006 (Rel. 88, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 2) XX DE Human astrovirus 1 gene for outer capsid protein, complete cds, isolate: S6 DE standard modi. XX KW . XX OS Human astrovirus 1 OC Viruses; Riboviria; Astroviridae; Mamastrovirus. XX RN [1] RP 1-2383 RA Ushijima H., Kakizawa J., Leying W.; RT ; RL Submitted (08-JAN-1997) to the INSDC. RL Hiroshi Ushijima, Aino University, Aino Health Research Center; Shibuya RL Toho Building 4F, 2-17-3 Shibuya, Shibuya-ku, Tokyo 150-0002, Japan RL (E-mail:ushijima-hiroshi@jcom.home.ne.jp, Tel:81-3-3486-8481, RL Fax:81-3-3486-8481) XX RN [2] RX DOI; 10.1002/jmv.1043. RX PUBMED; 11424111. RA Wang Q.H., Kakizawa J., Wen L.Y., Shimizu M., Nishio O., Fang Z.Y., RA Ushijima H.; RT "Genetic analysis of the capsid region of astroviruses"; RL J. Med. Virol. 64(3):245-255(2001). XX DR MD5; ef788d28bc34a160800172fb695ff9c3. DR EuropePMC; PMC2832772; 20100346. XX FH Key Location/Qualifiers FH FT source 1..2383 FT /organism="Human astrovirus 1" FT /isolate="S6 standard modi" FT /serotype="6" FT /mol_type="genomic RNA" FT /note="synonym: Human astrovirus type 1" FT /db_xref="taxon:12456" FT CDS 12..2381 FT /codon_start=1 FT /product="outer capsid protein" FT /db_xref="GOA:Q14V08" FT /db_xref="InterPro:IPR004337" FT /db_xref="InterPro:IPR022027" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q14V08" FT /protein_id="BAE97461.1" FT /translation="MASKSDKQVTVEVNNNGRGRSKSRARSQSRGRGRSVKITVNSQNK FT GRRQNGRNKRQSNQRVRNIVNKQLELPGFTGPKPAIWQSATATLGTVGSNTRGTTEIEA FT CILLNPVLVKDATGSTQFGPVQALGAQYSMWKLKYLNVRLTSMVGASAVNGTVVRVSLN FT PTSTPSSTSWSGLGARKHLDVTVGKNAIFKLKPSDLGGPRDGWWLTKHNGNASDTLGPS FT VEIHTLGRTMSSYQNQQFTGGLFLVELASEWCFTGYAANPNLVNLVTSSDKQVNVTFEG FT SAGTPLVMNVPAASHFARTVAQRSTLPTSMARAGENTTSDTVWQVLNTAVSAAELVTPP FT PFNWLVKGGWWFVKLIAGRVRNGNRSLYVYASYQDALSNKPALCTGSTSGSMRTRPAVM FT TTLQFTQMNQPSLGHGETPATLGRSIPTSGETLKVLLTVGNPISPNETNNQIWLNKTLT FT APGTNDQPSLGHGEKPATLGRSIPTSGETLKVLLTVGNPISPNETNKQTWVNKTIEPPG FT AVVKIGRDTQHYCTLNGFTLIKQQVTSVFLVRVNEGFQVTTHLSYFYRNSVNTDAVENI FT KIRSATRHTTVRFNQGSWYLLTSSVLHTGPPVSGWLWMNQELQNDQAYIIDQGIMHLIT FT PPPVSSQIYFEMATLVPQTRSGGGETGLELELGLSDDEYPISHVNDEEETEYETESDED FT ETDEVDRFDLCCTSDSEDDISDENNRVTLLSTLINQGMTVDRATMITNRAFPTPNYKPR FT REPSNDLLAPSDCLATARSHACNETCQLSGSRGHAE" XX SQ Sequence 2383 BP; 692 A; 570 C; 567 G; 554 T; 0 other; aaagaagtgt gatggctagc aagtctgaca agcaagttac tgttgaggtc aacaacaatg 60 gccgaggcag gagcaaatct agagcccgat cccagtcaag aggtcggggc agatctgtca 120 aaattacagt caattcccag aataaaggca gaagacaaaa cggacgcaac aaacgtcagt 180 ctaatcaacg tgtccgtaac attgtcaata agcaactcga gctcccaggt ttcacaggac 240 caaaaccagc aatatggcag agtgccaccg ccacccttgg gaccgttgga tccaacacca 300 gaggaaccac tgagattgag gcgtgtatcc tcctcaatcc tgtcctcgtt aaggacgcta 360 ctggaagcac tcagtttggg cctgtgcagg cgttaggagc acagtattcc atgtggaagc 420 tgaagtatct caatgtcaga ttaacatcaa tggttggtgc ttcagcagta aatggcacag 480 tagtcagggt ctcacttaac cccacctcaa caccatcttc tactagttgg tcaggattag 540 gggcacgcaa gcaccttgat gtcactgtgg ggaagaatgc tatatttaaa ttgaaaccat 600 cagacctggg tgggccaagg gatggttggt ggctcactaa acacaatggc aatgcttcag 660 atacgcttgg cccgtctgtt gaaattcata cgctgggaag gaccatgtcg tcatatcaaa 720 accagcagtt tacggggggc cttttcctag tggaattagc ttctgagtgg tgcttcaccg 780 gctacgcagc caacccaaac cttgttaacc tagttacctc ttctgacaaa caagtgaatg 840 tcacctttga agggtctgca ggcacaccat tggtcatgaa tgttcccgct gcaagtcact 900 ttgctagaac agttgcccaa cgctctacat tgccaacatc catggctaga gctggagaaa 960 atacaacttc tgacacagtc tggcaggtgc tcaatacagc ggtatctgct gcagagctgg 1020 ttactccacc accttttaat tggctagtta agggtgggtg gtggtttgta aagcttatag 1080 ctggtagggt gcgtaatgga aaccgtagtt tgtatgtcta tgcaagctat caagatgcat 1140 tgtccaataa accagcactg tgtacaggga gtacatcagg aagcatgagg acgcgcccag 1200 cagtgatgac aacattacag ttcacacaaa tgaaccaacc tagtttaggc catggtgaga 1260 cacctgcgac actcggcagg tctattccaa cttcaggaga gacactgaag gtgcttctca 1320 cagttgggaa ccctattagc cctaatgaaa ctaacaacca aatttggctg aacaaaactc 1380 tgacagcgcc aggcacaaat gaccaaccta gtttaggcca tggtgagaaa cctgcgacac 1440 tcggcaggtc tattccaact tcaggagaga cactgaaggt gcttctcaca gttgggaacc 1500 ctattagccc taatgaaact aacaaacaaa cttgggttaa taagacaatt gaacctcctg 1560 gagctgtggt caagataggc agagacactc agcattattg tacattgaac gggttcaccc 1620 ttatcaaaca gcaagtaacc agtgtcttct tggttagagt taatgagggg tttcaggtaa 1680 ccacccattt gagctatttc tataggaata gcgtcaacac cgatgctgtc gagaacatca 1740 aaattaggtc tgccaccaga cacacgacag tccggtttaa tcagggtagt tggtacctac 1800 tcacaagtag cgtgctgcat actggaccac ctgtatcagg atggctgtgg atgaaccaag 1860 agttacaaaa tgaccaggcc tatatcattg accaaggaat tatgcattta ataactcctc 1920 ctccagtctc atctcagatt tactttgaga tggccaccct tgttcctcag actaggtctg 1980 gtggaggaga aactgggctt gaactggaat tgggattatc tgatgatgaa tatccaatct 2040 cccatgtcaa tgatgaggaa gagacagaat atgaaacaga gagtgatgag gacgaaaccg 2100 atgaagtgga caggtttgat ctctgttgta cttccgattc ggaggacgac atctctgatg 2160 agaacaaccg cgtaaccctc ctctcaactc tcatcaatca gggaatgaca gtggatcgcg 2220 caaccatgat tacaaatcgc gctttcccca cgccaaatta caaacctagg cgtgaacctt 2280 caaatgacct gctggccccc agcgattgtc tggcgacagc acggtcgcat gcatgcaatg 2340 aaacatgcca actttcagga agccgcggcc acgccgagta gga 2383 // ID AB000300; SV 1; linear; genomic RNA; STD; VRL; 2389 BP. XX AC AB000300; XX DT 07-JUL-2006 (Rel. 88, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 2) XX DE Human astrovirus 1 gene for outer capsid protein, complete cds, isolate: S7 DE standard. XX KW . XX OS Human astrovirus 1 OC Viruses; Riboviria; Astroviridae; Mamastrovirus. XX RN [1] RP 1-2389 RA Ushijima H., Kakizawa J., Leying W.; RT ; RL Submitted (08-JAN-1997) to the INSDC. RL Hiroshi Ushijima, Aino University, Aino Health Research Center; Shibuya RL Toho Building 4F, 2-17-3 Shibuya, Shibuya-ku, Tokyo 150-0002, Japan RL (E-mail:ushijima-hiroshi@jcom.home.ne.jp, Tel:81-3-3486-8481, RL Fax:81-3-3486-8481) XX RN [2] RX DOI; 10.1002/jmv.1043. RX PUBMED; 11424111. RA Wang Q.H., Kakizawa J., Wen L.Y., Shimizu M., Nishio O., Fang Z.Y., RA Ushijima H.; RT "Genetic analysis of the capsid region of astroviruses"; RL J. Med. Virol. 64(3):245-255(2001). XX DR MD5; ea3451a4a122fea037be1d1a2d594aa5. DR EuropePMC; PMC2832772; 20100346. XX FH Key Location/Qualifiers FH FT source 1..2389 FT /organism="Human astrovirus 1" FT /isolate="S7 standard" FT /serotype="7" FT /mol_type="genomic RNA" FT /note="synonym: Human astrovirus type 1" FT /db_xref="taxon:12456" FT CDS 12..2387 FT /codon_start=1 FT /product="outer capsid protein" FT /db_xref="GOA:Q14V07" FT /db_xref="InterPro:IPR004337" FT /db_xref="InterPro:IPR022027" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q14V07" FT /protein_id="BAE97462.1" FT /translation="MASKSDKQVTVEVNNNGRSRSRSRGRSQSRGRGRSFKITVNSKNR FT GRRQNGRNKRQSNQRVRNIVNKQLRKQGVTGPKPAICQRATATLGTIGSNTSGSTEIEA FT CILLNPVLVKDATGSTQFGPVQALGAQYSMWKLKYLNVKLTSMVGASAVNGTVLRISLN FT PTSTPSSTSWSGLGARKHLDVTVGRNALFKLKPADLGGRRDGWWLTNTNDNASDTLGPS FT IEIHTLGKTMSSYLNQQFTGGLFLVELASEWCFTGYAANPNLVNLMKSTDKQVNVSFEG FT DNGTPLIMKVPDTSHFGTDSRWPRSTLPTTLARAGQNTTSDTVWQVLNTAVSASEIVTP FT PPFNWLIKGGWWFVKLIAGRSRAGMRSFYVYPSYQDALSNKPAPCTGSVPGGMRVRAAI FT PTTLQFTQMNQPSLGHGEVTATLGRSIPTPGDTFKVVLTIGQPFAPNTLANQTWVNKTT FT TAPQGQHVVKIAKDTSNYTTMQGFTPISNVTWYTEDFQPSEEPPPISGLQVLVDSRKKA FT DVYAVQQYLNHPSNTKDQLTSIFLVRVTTSFQVNNHLSYFYRAAGTGTAVENFKIRGAT FT SDQNISFSEGWYLMTNTATFNPPAPPGWIWKNVELDNNTPYIVDQGMMHLIMSPPVGTQ FT LLFEMKTTVSGTRNVSHFDHDENTSPVWCDALDAADVKKLPTETHTESEEDEDEDDEAD FT RFDLHSSYGSEPEDDDENNRVTLLSTLINQGMTVERATMITKRAFPTCADKQKRSVHMD FT LLASGLSPGNVWSHACEEARTMGTNHMPNVWRSRGHAE" XX SQ Sequence 2389 BP; 701 A; 571 C; 559 G; 558 T; 0 other; ggagaagtgt gatggctagc aagtctgata agcaagttac tgttgaggtc aataacaatg 60 gccgcagcag gagcagatct agaggacggt ctcagtccag aggccgtggg agatccttca 120 aaattacagt caactcaaag aatagaggca gaagacaaaa cggacgcaac aaacgtcaat 180 ctaatcaacg tgtccgtaac attgtcaata aacaactcag gaaacagggt gtcacaggac 240 caaaacctgc aatatgccag agagccacag caacacttgg gacaattgga tcaaacacaa 300 gtgggtcgac agagattgag gcgtgcattt tacttaatcc agttctggtt aaggacgcta 360 ctggaagtac tcagtttggg ccagtgcagg cgctaggtgc tcagtattca atgtggaaac 420 taaagtatct gaatgttaaa ctgacatcca tggtgggcgc ctcagcagtt aatgggactg 480 tactccgcat atcgctgaac cctacatcta ctccttcttc cactagctgg tcaggacttg 540 gtgcccgcaa acacttggat gttacagtgg gaaggaatgc actctttaaa ctgaaaccag 600 cagacttggg tgggcgtaga gacgggtggt ggttgaccaa tactaatgat aatgcatctg 660 acacgcttgg gccatcaata gagattcaca cacttggcaa aactatgtcc tcatatctaa 720 accagcagtt tactgggggg ctatttttgg tggaattggc ttctgaatgg tgtttcactg 780 gctatgctgc caaccctaat cttgtcaatc taatgaaatc aactgacaaa caagttaatg 840 tttcttttga gggtgacaac gggacaccac tcataatgaa agttccagat acaagccatt 900 ttggcacgga cagcaggtgg ccccgttcca cgttgcctac caccttggca agggctggac 960 aaaatactac ctctgatact gtctggcaag tgttgaacac agcggtctcg gcttcggaga 1020 tagtcactcc tccaccattc aactggctga tcaaaggtgg atggtggttt gtcaagctga 1080 tagctggcag atccagggct ggtatgcgta gcttctacgt gtacccaagc taccaagatg 1140 cactatctaa taaaccagca ccttgtactg gaagtgtccc gggtggcatg agagttagag 1200 cagcaattcc aaccactctc caatttacac aaatgaacca acccagcctt gggcatggtg 1260 aagtaacagc taccctgggt aggtctatac caacacctgg tgacactttt aaggtagttt 1320 tgaccatagg ccaacctttt gcaccaaaca ctttggccaa tcaaacatgg gtgaataaaa 1380 caactacagc accccaaggc caacatgtgg ttaaaattgc caaggacaca agcaactaca 1440 ccaccatgca aggctttaca ccaattagta atgtcacctg gtacacagaa gatttccagc 1500 cctctgagga accaccacct atttctgggc tgcaagtcct cgttgacagc aggaagaagg 1560 ctgatgtgta cgctgttcag cagtacctta atcatccatc aaataccaaa gatcaactta 1620 ctagtatctt tttagtgagg gttactacca gcttccaagt caataaccac ttgagctatt 1680 tttatagggc tgctggcact ggcactgctg tcgaaaattt caaaataagg ggtgcaactt 1740 cagatcaaaa catcagcttt tctgaggggt ggtacctaat gacaaacaca gccactttca 1800 atcccccagc tcctcctggc tggatatgga agaatgttga gctagacaac aacaccccgt 1860 acattgtaga ccagggtatg atgcacttga tcatgtcccc ccctgttggc acacagcttt 1920 tgtttgagat gaaaacaaca gtatctggca cacgaaatgt gtcccatttt gatcatgatg 1980 aaaatacatc tcctgtgtgg tgtgacgcac ttgatgcggc agatgtgaaa aaactgccca 2040 cagagacaca cactgaaagt gaggaagatg aggacgaaga cgacgaagcg gacaggtttg 2100 atcttcatag ttcttatggc tctgagcctg aggacgatga tgagaataac cgtgtaaccc 2160 tcctctccac actcataaac caaggaatga cagtggagcg cgcaacaatg attaccaaac 2220 gcgcgttccc cacttgcgct gacaaacaaa agcgcagtgt acacatggac ctgcttgctt 2280 ctggcctctc gccaggcaat gtatggtcac atgcgtgtga agaagcacgc accatgggca 2340 ctaatcatat gcctaatgtc tggagaagcc gcggacacgc cgagtagga 2389 // ID AB000301; SV 1; linear; genomic RNA; STD; VRL; 2377 BP. XX AC AB000301; XX DT 06-JUL-2006 (Rel. 88, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 2) XX DE Human astrovirus 1 gene for outer capsid protein, complete cds, isolate: SX DE PAKAS 706. XX KW . XX OS Human astrovirus 1 OC Viruses; Riboviria; Astroviridae; Mamastrovirus. XX RN [1] RP 1-2377 RA Ushijima H., Kakizawa J., Leying W.; RT ; RL Submitted (08-JAN-1997) to the INSDC. RL Hiroshi Ushijima, Aino University, Aino Health Research Center; Shibuya RL Toho Building 4F, 2-17-3 Shibuya, Shibuya-ku, Tokyo 150-0002, Japan RL (E-mail:ushijima-hiroshi@jcom.home.ne.jp, Tel:81-3-3486-8481, RL Fax:81-3-3486-8481) XX RN [2] RX DOI; 10.1002/jmv.1043. RX PUBMED; 11424111. RA Wang Q.H., Kakizawa J., Wen L.Y., Shimizu M., Nishio O., Fang Z.Y., RA Ushijima H.; RT "Genetic analysis of the capsid region of astroviruses"; RL J. Med. Virol. 64(3):245-255(2001). XX DR MD5; 577f52147ab6ea01dd3f418eb86443e8. DR EuropePMC; PMC2832772; 20100346. DR EuropePMC; PMC3166150; 21915361. XX FH Key Location/Qualifiers FH FT source 1..2377 FT /organism="Human astrovirus 1" FT /isolate="SX PAKAS 706" FT /mol_type="genomic RNA" FT /note="synonym: Human astrovirus type 1" FT /db_xref="taxon:12456" FT CDS 12..2375 FT /codon_start=1 FT /product="outer capsid protein" FT /db_xref="GOA:Q14V06" FT /db_xref="InterPro:IPR004337" FT /db_xref="InterPro:IPR022027" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q14V06" FT /protein_id="BAE97421.1" FT /translation="MASKSDKQVTVEVNNNGRSRSKSRARSQSRGRGRSVKITVNSHNK FT GRRQNGRNKYQSNQRVRKIVNKQLRKHRFTGPKPAIWQTATATLGTIGSNTTGATEIEA FT CILLNPVLVKDATGSTQFGPVQALGAQYSMWKLKYLNVRLTSMVGASAVNGTVVRISLN FT PTSTPSSTSWSGLGARKHLDVTVGKNAVFKLKPSDLGGPVDGWWVNKTQNDASDTLGPS FT IEIHTLGQTMSSYQNTQFTGGLFLVELSSAWCFTGYAANPNLVNLVKSTDKSVNVTFEG FT SAGTPLIMNVPEHSHFARTAVEHSSLSTSLSRAGGESSSDTVWQVLNTAVSAAELVTPP FT PFNWLVKGGCGFVKLIAGRARTGARGFYVYPSYQDALSNKPALCTGGVPASARLSNPVR FT TTLQFTQMNQPSLGHGATPMTFGRSIPEPGEQFRVLLTVGPPMAPNTANSQNWVNKTIV FT PPENQYTVKIGIDLEHYTTMQGFTPVESVSWYTADFQPSDEPNPIPGLYARVNNTKKAD FT VYGVQQFKSSHTNNRHQITSVFLVRVTTSFQVINYTSYFIRGAESGSNVSNVKIRDQTY FT HTPLQFTQGKWYLLTSTVMHDGPTSSGWVWMNQELTNNIAYRIDPGMMHLITPPPAASQ FT LYFELHTVLPQVRSEEPETYVEEPETYVDALLPVEPSIEEEETDSDFESTEDENDEVDR FT FDLPESDDDAVEKTDRVTLLSTLLNQGISVERATRITNGAFPARAARVRRSVYNDLLVS FT GLSPGAAWSHACEQARRAAVTIMTCISGSRGHAE" XX SQ Sequence 2377 BP; 686 A; 571 C; 554 G; 566 T; 0 other; aaagaagtgt gatggctagc aagtctgaca agcaagtcac tgttgaggtc aataacaatg 60 gccgaagcag gagcaaatcc agagctcgat ctcaatctag aggtcgaggc agatcagtca 120 agattacagt caattcccat aataaaggca gaagacagaa cggacgcaac aaatatcaat 180 ctaatcaacg tgtccgtaaa attgtcaata aacaactcag gaaacaccgt ttcacaggac 240 caaaacctgc aatttggcaa acagccaccg caacacttgg aacaattgga tcaaatacca 300 caggagcaac agaaattgag gcgtgcatcc tccttaatcc agttctggtt aaggacgcta 360 ctgggagtac tcagtttggc ccagtgcagg cgctaggagc gcagtattca atgtggaagc 420 tcaaatatct taacgtcaga ctgacgtcta tggttggtgc ttcagcagta aatggcaccg 480 tagtgagaat atcactcaat ccaacttcca ctccatcttc cactagctgg tctggactcg 540 gagcacgcaa gcatctagat gttactgttg ggaaaaatgc agtctttaaa ttgaaacctt 600 ccgacttggg tggacccgtg gatggatggt gggttaacaa aacacaaaat gatgcttcag 660 acacgcttgg tccatccatt gagatacata cattgggcca aactatgtca tcataccaga 720 acacacagtt cacaggaggg ctatttttgg tggagctttc atcagcatgg tgctttactg 780 gatatgcggc taatccaaat ttagtaaatt tggtgaagtc tacagataag agtgttaatg 840 tcacttttga aggctcagcc ggaacaccgc tcataatgaa tgtgccagaa cacagccact 900 tcgctagaac agcggtggag cactcttctc tgtccacatc cctctcgagg gctggtggtg 960 agtcatcatc tgacactgtt tggcaagtct tgaacaccgc tgtttcggca gctgagctgg 1020 taaccccgcc gccattcaat tggctggtca agggtggctg tgggtttgtc aaactcatag 1080 ccgggcgcgc gcgcactgga gcgcgtgggt tctatgttta tcctagttac caagatgccc 1140 tgtccaacaa acctgccctt tgcaccggtg gcgtccctgc cagcgctagg ctgagtaacc 1200 cagtacgcac cacacttcag tttacacaga tgaatcagcc tagcctaggt catggtgcta 1260 ctccaatgac atttggccgc tccataccag aacctggtga acaatttaga gttttgctaa 1320 ctgttggacc tccaatggcc cctaatacag ccaactctca gaattgggtg aacaagacaa 1380 ttgtcccacc cgagaatcag tacacagtta aaattggtat agaccttgag cattatacta 1440 caatgcaggg attcacccct gttgagagtg tgagttggta cacggctgat ttccaaccct 1500 ctgatgagcc caacccaata cccgggctat atgcccgcgt gaataacacc aagaaggctg 1560 atgtgtatgg tgtgcaacaa tttaaaagct cacacactaa taatagacac cagataacta 1620 gtgtttttct tgtgagagtg acaactagct tccaggtgat aaactacact agctacttca 1680 taagaggtgc tgagagtggc tcaaatgtct ctaatgtaaa gattagagac caaacatacc 1740 acacaccact acagtttacc cagggtaagt ggtacctgct aactagtaca gttatgcatg 1800 atggtcctac atcatcaggc tgggtttgga tgaatcaaga gctaaccaac aatattgcat 1860 atagaattga tccaggtatg atgcacctta tcacacctcc cccagccgca tcacaacttt 1920 attttgaact gcatactgtg cttcctcaag taagatcaga ggaacctgag acatatgtgg 1980 aggaacctga gacatatgtg gatgctctct tgcctgtaga accatcaatt gaagaagaag 2040 agacagacag tgactttgag agtacagagg acgaaaacga tgaagtggac aggttcgatc 2100 tccctgaatc agatgatgat gctgttgaga agacagaccg tgtaaccctc ctctctaccc 2160 tcctcaatca aggaatttca gtggagcgcg ccactagaat tactaatggt gcattcccag 2220 cacgcgccgc tagagtgagg cgcagtgttt acaatgacct gttggtttcc gggcttagcc 2280 ctggtgcagc atggtcccat gcgtgtgaac aagcacgcag agcagcagtg acaatcatga 2340 cctgcatatc tggaagccgc ggccacgccg agtagga 2377 // ID AB000383; SV 1; circular; genomic DNA; STD; VRL; 5423 BP. XX AC AB000383; XX DT 23-JAN-1997 (Rel. 50, Created) DT 04-AUG-2013 (Rel. 117, Last updated, Version 6) XX DE Leucania separata nucleopolyhedrovirus genes for p13, xe, envelope protein, DE complete cds. XX KW . XX OS Leucania separata nucleopolyhedrovirus OC Viruses; Baculoviridae; Alphabaculovirus. XX RN [1] RP 1-5423 RA Jin T.; RT ; RL Submitted (09-JAN-1997) to the INSDC. RL Contact:Tianquan Jin institute of virology, Virology; Wuhan, HuBei 430072, RL the People's Republic of China XX RN [2] RA Jin T., Jin H., Qi Y., Huang Y.; RT "Nucleotide Sequence of a 5423 Base Pairs Fragment of the LsNPV Genome and RT Comparison with AcNPV"; RL Unpublished. XX DR MD5; 9b530e0bd8ff7f689a0dff294b3da863. XX FH Key Location/Qualifiers FH FT source 1..5423 FT /organism="Leucania separata nucleopolyhedrovirus" FT /lab_host="Leucania seperata" FT /mol_type="genomic DNA" FT /clone="pLsEX1" FT /db_xref="taxon:1307956" FT CDS 699..1043 FT /codon_start=1 FT /product="p13" FT /db_xref="GOA:Q83084" FT /db_xref="InterPro:IPR002495" FT /db_xref="InterPro:IPR029044" FT /db_xref="UniProtKB/TrEMBL:Q83084" FT /protein_id="BAA19093.1" FT /translation="MFAYVTLVMLGDEYVEGAKVLAKSILYTGTKRDLVCMVTPDLSEE FT ARNELAKLYTHVVVVDYIYYECPPMLTKRQNEVYGKWISYAFTKWQCLTLLQYKKILYL FT DADHLVVNKH" FT CDS 1591..1938 FT /codon_start=1 FT /product="xe" FT /db_xref="InterPro:IPR006640" FT /db_xref="UniProtKB/TrEMBL:P90233" FT /protein_id="BAA19094.1" FT /translation="MSPNKTYHILEPDTFMKMRGDLAFDLFDDINKSVFNDKLRDVEIV FT WSNRLRRVAGRWEKKKNNTPCKIVLSSVMLTDKSRLVDTLAHDMCHVAVYIIDNKASVV FT TTKIGCTGYEK" FT CDS 2352..4247 FT /codon_start=1 FT /gene="pdv-e66" FT /product="envelope protein" FT /db_xref="GOA:P89518" FT /db_xref="InterPro:IPR006934" FT /db_xref="InterPro:IPR008929" FT /db_xref="InterPro:IPR012970" FT /db_xref="UniProtKB/Swiss-Prot:P89518" FT /protein_id="BAA19095.1" FT /translation="MTVIDKNDLAVFEKYYLDTLQTTFLQKAEKVAHATRQFSDDGNIF FT VNMNTWSSAVDFGIVLHTLIGYGVRFNNRNDELYENEELAYGLYEAMHLIYEHLPDPAP FT THSAPLGLIVPDWYHFSITMPECFQNTCIVLRDHYDLRELTESLLHYYLPLPTLSMGLW FT RTAGNAMRMCLPYCYGQLLRGYTFAEIGDETQVQYVLDLIKFPLVKSGNGIHYDYAYFD FT HTDVRAYGYLVNSYFTFSYYNFLFGEETVNMQNVYNSLSLIGSNQGIVNPGLLSRNGSN FT YSAVLAHLIEFVDGVFSGDFSKILTVRNNRYFGSVVGQSPDIAYYEADPNNSLHAPLWA FT MTRRIWSNTGRVLSYRSVGLESGILLTTNLNGVINVPTTGPSTSSFHPTLAYTALAATE FT NAGGMAMHVRLAELNLEFHSYTLYHRYGMFHLYDKIRTLRHITNNARCVVLVRDNNNES FT RWTSASNLISPRITAKHHNIINNSSLSNFDVRTFDALNLSTAEQIISAELMNRGGGVTC FT FSLLAQDVAGNDNTTITRIPESNILVIATNSNSIQCVIDFPVVVLKDEETRQITINDAT FT NISRNLHQLSIDKIVNVLSVLSLSVDSLILPANITRSANSFYLQNDHGNQFKFMY" XX SQ Sequence 5423 BP; 1512 A; 1144 C; 1255 G; 1512 T; 0 other; gatatcgatc gcaaaaattg agacatgtcg aattggacga agctgcagat agacatcgcg 60 tcgagttaga tcgaggagtg cagatcacgt gtcgtaacgg ccatcaagtc aagctgtaca 120 ccgatttccg gctaaagtgg ttcgatgcgc gccaacgtcc gtttgaacga acgcgcaaat 180 tgactagatt gtcgttcgac aagtacatga tgacggctcg caccaacgaa cgcatcgtaa 240 gagagacgtt tctaaacgat acacctagcg ataaagtttt ggtgctgtac ggagcgggag 300 tcaactttgt taatgtggcc tgctacacga cgaagttcaa gcacacagat ttgttacgtc 360 gattgagatc gagacgcaac atcagagttc gactcgtcga cgaatcgtac accagcaaac 420 cgtggttccg actgtaatga gctgcggaac ggcacgtaca cccgactgcg attgaaccat 480 cgacttcgtg cggcgtctgt ccagactgca acgccgacgt cgagcgggac tacaacgccg 540 cgaagaatat attagttatt ttcaaaggtc cgccgtctca ggccgagccc gagctgcgac 600 tcgggcgtaa ccaccgacaa agactcacac tccatacggc cctccatcca attaaccgtc 660 atcgagcccg ggtcttagaa ggttaagggt aatcgataat gtttgcgtat gtaactttgg 720 taatgctcgg tgacgagtat gtggaaggcg caaaggtttt agcaaagagt atactgtaca 780 cgggtacaaa acgcgatttg gtgtgcatgg tgacgcctga tctcagcgaa gaggcgcgca 840 acgaacttgc caaactgtac acgcatgtcg ttgtcgtaga ctatatttac tacgaatgtc 900 ctccaatgct aacgaaacgg caaaacgaag tatacggaaa atggatctcg tacgctttta 960 cgaaatggca gtgtctgacg ctattgcaat acaagaagat attgtatctg gacgctgatc 1020 atctcgtggt caataaacat tgaacatttg tttcatctaa aagcaccggc gctgtgcttc 1080 accgacgaca acaacagcta ctacggaaag ttaatgttcg gtgacgtcgt gtcgttcaac 1140 aatttggccg gatttatgcg ttacaataaa attttgtgca cagggtggta cagtattgtt 1200 cgagccaagc ttgcagcttt attacacaat tctcgaactg ttacgaccga caaataattg 1260 tttagtgaaa tgttactatc acaatggttt cgacgaacaa gtgctgttgc aggcgtttat 1320 tgagatgcgc atgaacgtta cccagctatc gttgttgtac acgtggacgc cggcgcttat 1380 caccgattgc gcaaaggcgg cggtaatccg tacgtaatca attattacgg agacgcaaag 1440 ccttggcact tgtctaaatt gcgcaacatt gagtatacag acgtgtatat ttggaaatgg 1500 tttcaagatt ctaatattgg cacggagtgt gtataaaacc cgtagttaca ggattgtaac 1560 gttagtgaaa cttgagcaat tcactttaac atgtcaccga ataaaactta tcacattttg 1620 gagcccgata cgtttatgaa aatgcgtggc gatctggcgt tcgatctttt cgatgacatc 1680 aacaagagtg ttttcaatga caaactgcgc gatgtggaga ttgtgtggtc gaaccggttg 1740 cgtcgcgtcg ccggccgttg ggagaaaaaa aagaacaaca caccgtgcaa aattgtgctg 1800 tcgagcgtta tgctgacgga caaatcgcgc cttgtcgaca cgttagcgca cgacatgtgt 1860 cacgtggccg tgtacataat tgataacaaa gccagcgtag tcacaacgaa aattggctgt 1920 actgggtacg aaaagtgatt cgagaatatg aaaatattga cattaaacgc caacatgcta 1980 caccattgac accgacgcgt gctacgtgtg ctcagattgt aatcatatgc acagattaac 2040 tgaagactta aattttaaac tatgtaaatg tatgtgtgga ggtgttttgt tatgtaccaa 2100 ttaaaaaaga ttaaatatat aagtttgtcc agttttccat tataaatacc aaatatcaaa 2160 tagcgacgat atattgcaca tgtgcgatgt gcataagaat catataactt gatacaatca 2220 gcagtagtta gaatgtggtg tacattttta tgtgtgcgtt tataatattt gtttaattta 2280 atatggcaaa ccgatgtgtt tttggctaca aacgctataa atccgttaat tcataaacgt 2340 ggatttggcc gatgacagta attgacaaaa atgacttggc agtttttgaa aaatactatc 2400 tggacacgtt acaaaccacg tttttgcaaa aagccgaaaa agtagcgcac gccactcggc 2460 agtttagcga cgacggtaac atttttgtca acatgaacac gtggtcgagc gccgttgact 2520 ttggcattgt tttgcacact ctgataggat acggtgttag atttaacaat cgcaacgacg 2580 aattgtacga aaacgaagag ctagcgtacg gtttgtatga ggcaatgcat ttgatttacg 2640 aacaccttcc cgatccggcg ccaactcatt cggctccatt gggactgatc gtaccggatt 2700 ggtaccactt tagcatcacc atgcccgaat gtttccaaaa cacatgtata gttttgcgcg 2760 atcactatga tttgcgcgaa ttaacagaat cgttgctgca ttattatttg ccgttgccga 2820 cactttcgat gggtttgtgg cgtacggccg gcaacgcaat gcgcatgtgt ttgccctatt 2880 gttacggaca attgttgcgc ggctatacgt ttgccgagat tggtgatgaa acgcaggtac 2940 aatatgtatt ggacttgatc aagtttcccc ttgtaaaatc cggcaacggt attcattacg 3000 attacgcgta tttcgaccac actgatgtgc gcgcatacgg ttatctagtc aatagttact 3060 ttacgtttag ctattataac tttttgtttg gcgaagaaac ggtgaacatg caaaacgtat 3120 acaattcatt atcgctcatc ggcagtaatc aaggaatagt gaatccagga ctcttgtcgc 3180 gcaacggttc caattattct gcggtcctgg cacatttgat agaatttgtc gacggtgttt 3240 ttagcggcga ctttagtaaa attttaactg tgcgcaacaa tcgttacttt ggttcggttg 3300 tcggtcagtc gccggacatt gcctactacg aggcggatcc taataacagt ttgcatgcac 3360 cgctatgggc catgactcgg cgcatctggt caaacacggg ccgtgttctt tcataccgat 3420 cggtcggctt ggaatctggc attttgctca cgacgaatct caacggagtg attaacgtcc 3480 caacgacggg ccctagtacg agcagtttcc atccaacgct agcgtatacg gctctggccg 3540 ctacagaaaa cgcaggcggt atggcaatgc acgtcaggtt ggcggagttg aatctcgaat 3600 ttcatagtta tacactttat catcgctacg gcatgtttca tttgtacgat aaaattagga 3660 cgttgcgcca catcacaaac aacgcgcgat gcgtcgtgct ggtgcgcgac aacaataatg 3720 aatctcgctg gacgtcggct tcgaatctca tcagtccacg cattactgcc aagcatcata 3780 acattattaa caatagtagt ctttcaaact tcgatgtgcg cacatttgac gcgttaaatt 3840 tatcaacggc cgaacagatt atcagcgcag agttgatgaa ccgtggcgga ggtgttactt 3900 gtttcagttt gttagcgcag gacgtagcgg gcaacgacaa tactactata acccgtatac 3960 ccgaaagtaa tatactagta attgccacca attcaaacag tattcaatgt gttatagatt 4020 ttcccgtggt ggtgttaaag gacgaggaaa ctcgccagat tactattaac gacgccacca 4080 acatttcgcg caatctccat caattgtcaa tcgacaagat cgttaacgtg ctgtcggtgt 4140 tgtcgttgtc cgtcgacagt ttgattctgc ccgcgaacat aactcgttcc gccaacagtt 4200 tttacttgca aaacgatcac ggcaatcaat tcaagtttat gtattagatt gttgagggaa 4260 cggcggctac ggctatgggt ttattcaaat ctattacgcg agcgggttcg cgtgctctca 4320 agtccaaatt agacacataa gttttttgtc tttccctttt ccgagcttca actatctcaa 4380 cggatttatt aatgtttagc atgagcacaa taaacatgat gactacaata aacaccacta 4440 cacaacatat tacaagtaaa aagtcacgca gaaaggcttg atttcgtgtt acgatttgtt 4500 caagttgatc gtgattaagc acggacacgg tgttcgtccg attgtttcgt ctcattgcag 4560 tgtcttcaaa aaaagtaatt gtaccgagcc gctgacacga tgagattgtc gatgcgtgtc 4620 gcctcgtaca acttgtcgcg catcgtgttc aaatggtacg gagtgttaac gtcggcataa 4680 tcgaacgaaa ctggattgtc ctcgaccata ttgttgggca cggcaccgaa agacgtgatg 4740 gccaaactgt cgtttttaca gtacaatcga acgttgcgtt tgcggtcaat gctgtttagc 4800 ttgatgataa tctcgggtac aatctggtat ggcagcacga gcatttggaa catattaata 4860 aaagtaacga ccgtttgcga cgagtcggga atgagcagca gctgttgggg tgtattataa 4920 attttagttg ggtatgttga gatactacaa tggacgtttg tgtcgccttt gatcagtcta 4980 cgaacgagtt cgttttttag ttcatgtata tatctttcac gtctgcgtcg agcatcttca 5040 aaagcaaatt ttgcctgcct atcctttcct tgtaacctcc aatatgtaga tacgtttgac 5100 gttttaaatg acgaattttc gcgagtttcg cgtaaaaaac atattagaaa attgttttta 5160 ctgtcatcgg tgagtgtgtt aaagtgatcg aggggagatt cgcctgcgat tggaatgtaa 5220 tcgcgtaagg ttctagtcaa atattgaatg ggacacactg gattgttaga gtcgaccacc 5280 atagttttac aatagaacaa actgtccgtt aacatcatgc tgaacactaa tgtattgccc 5340 gcgccaattt cgacgatggg ataaatggga ttccaataga caatactaaa attaggattt 5400 tttttgggac tatgactctc gag 5423 // ID AB000386; SV 1; linear; genomic RNA; STD; VRL; 15385 BP. XX AC AB000386; XX DT 17-FEB-1997 (Rel. 50, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 6) XX DE Mumps virus cDNA sequence for genomic RNA, complete sequence. XX KW . XX OS Mumps rubulavirus OC Viruses; Riboviria; Negarnaviricota; Haploviricotina; Monjiviricetes; OC Mononegavirales; Paramyxoviridae; Rubulavirus. XX RN [1] RP 1-15385 RA Mori C.; RT ; RL Submitted (10-JAN-1997) to the INSDC. RL Chisato Mori, The Research Foundation for Microbial Diseases of Osaka Univ RL ., Kanonji Institute, Research and Development Division; 2-9-41, RL Yahata-cho, Kanonji city, Kagawa 768, Japan (E-mail:biken-rd@niji.or.jp, RL Tel:0875-25-4171, Fax:0875-23-1660) XX RN [2] RA Mori C., Fujita J., Tooriyama T., Takahara R., Takamizawa A.; RT "Complete Nucleotide Sequence of the Mumps Virus Urabe Vaccine Strain RT Genomic cDNA"; RL Rinsho To Uirusu 23:341-352(1995). XX DR MD5; aac455f6ab671307a2190e383dd201af. XX FH Key Location/Qualifiers FH FT source 1..15385 FT /organism="Mumps rubulavirus" FT /strain="Urabe AM-9-A" FT /mol_type="genomic RNA" FT /note="Strain Urabe AM-9-A consists of at least two FT different clones, and variation was found at four sites" FT /note="This sequence is complementary to the genomic FT sequence" FT /db_xref="taxon:1979165" FT variation 784 FT /replace="g" FT variation 7409 FT /replace="g" FT variation 8005 FT /replace="a" FT variation 8015 FT /replace="g" XX SQ Sequence 15385 BP; 4735 A; 3408 C; 3138 G; 4104 T; 0 other; accaagggga aaatggagat gggatgttgg tagaacaaat agtgtaagaa acagtaagcc 60 cggaagtggt gttttgcgat ttcgaggccg ggctcgatcc tcacctttca ttgtcgatag 120 gggacatttt gacactacct ggaaaatgtc gtctgtgctc aaagcatttg agcgattcac 180 gatagaacag gaacttcaag acaggggtga ggagggttca attccgccgg agactttaaa 240 gtcagcagtc aaagtcttcg ttattaacac acccaatccc accacacgct accagatgct 300 aaacttttgc ctaaggataa tctgcagtca aaatgctagg gcatctcaca gggtaggtgc 360 attgataaca ttattctcac ttccctcagc aggcatgcaa aatcatatta gattagcaga 420 tagatcacct gaagctcaga tagaacgctg tgagattgac ggttttgagc ctggcacata 480 taggctaatt ccgaatgcac gcgccaatct tactgccaat gaaattgctg cctatgcttt 540 gcttgcagac gacctccctc caaccataaa taatggaact ccctatgtac atgcagatgt 600 tgaaggacag ccatgtgatg agattgagca attcctagat cgatgctaca gtgtactaat 660 ccaggcttgg gtgatggtct gtaaatgtat gacagcgtac gaccaacatg ctggatctgc 720 tgatcggcgg tttgcaaaat accagcaaca aggtcgcctg gaagcaagat acatgctgca 780 gccagaggcc caaaggttga tccaaactgc catcaggaaa agtcttgttg ttagacagta 840 ccttactttc gaactccagt tggcaagacg gcaggggttg ctatcaaaca gatactatgc 900 aatggtgggt gacattggaa agtacattga gaattcaggc cttactgcct tctttctcac 960 cctcaaatat gcactaggta ccaaatggag tcctctgtca ttggccgcat tcaccggtga 1020 actcactaag ctccgatccc tgatgatgtt atatcgagat atcggagaac aagccagata 1080 ccttgctttg ttggaggctc cccaaataat ggactttgca cccggaggct acccattgat 1140 attcagttat gctatgggag tcggtacagt cctagatgtc caaatgcgaa attacactta 1200 tgcacgacct ttcctaaatg gttattattt ccagattggg gttgagactg cacgacggca 1260 acaaggcact gttgataaca gagtagcaga tgatctaggc ctgactcctg agcaaaggac 1320 tgaggttact caacttgttg acaggcttgc aaggggcaga ggtgcgggga taccaggtgg 1380 gcccgtgaat ccttttgttc ctccagttca acagcaacaa cctgctgccg cacatgagga 1440 cacccctgca ttggaggaat cagacgacga cggcgatgaa gacgggggtg caggactcca 1500 aaatggagca caagcaccag ctgcaagaca gggaggccaa aatgacttca gagtacagcc 1560 actacaggat ccaattcaag cacaactttt catgccatta tatcctcaag tcagcaacat 1620 cccaaatcat cagaatcatc agatcaatcg cgtcgggggg atggaacacc aagatttatt 1680 acgatacaac gagaatggtg atcctcaaca agatgcaagg ggcgaacacg gaaacacctt 1740 cccaaacaat cctaatcaaa acgcacagtc gcaagtgggc gactgggatg agtaaatcac 1800 tgacatgatc aaactacccc caattgcaat aaccccagga caatctagcc acagctaact 1860 gcccaaatcc actacattcc attcatattt agtctttaag aaaaaattag gcccggaaag 1920 aattagttct acgagcatcg acacaattat cttgatcgtg tttctttccg ggcaagccat 1980 ggaccaattt ataaaacaag atgagactgg tgatttaatt gagacaggaa tgaacgttgc 2040 aaatcatttc ctatccgccc ccattcaggg aaccaactcg ttgagcaagg ccacaatcat 2100 ccctggcgtt gcaccagtac tcattggcaa tccagagcaa aagaacattc agtaccccac 2160 cacatcacat caggggtcca agtcaaaggg cagaggctca ggggccaggc ccatcatagt 2220 ctcatcctcc gaaggaggca ctggagggac tcagattcct gagccccttt tcgcacaaac 2280 aggacaaggt ggcattgtca ccaccgttta tcaggatcca actatccaac caacaggttc 2340 atatcgaagt gtggaattgg ctaagatagg aaaagagaga atgattaatc gatttgttga 2400 aaaaccaaga acctcaacgc cggtaacaga atttaagagg ggggccggga gcggctgctc 2460 aaggccagac aatccaagag gagggcatag acgggaatgg agcctcagct gggtccaagg 2520 agaggtccgg gtctttgagt ggtgcaaccc catatgctca cctatcactg ccacagcaag 2580 attccactcc tgcaaatgtg ggaattgccc cgcaaagtgc gatcagtgcg aacgagatta 2640 tggacctcct tagagggatg gatgctcgcc tgcaacatct tgaacaaaag gtggacaagg 2700 tgcttgcaca gggcagcatg gtgacccaaa taaagaatga attatcaaca gtaaagacaa 2760 cactagctac aattgaagga atgatggcga cagtaaagat catggatcct ggaaacccga 2820 caggggtccc agttgatgag cttagaagaa gttttagtga tcatgtaaca attgttagtg 2880 gaccaggaga tgtgtcattc agctccggtg aagaacccac actgtatttg gatgaactag 2940 cgaggcctgt cccaaagccc cgtcctgcaa agcagccaaa accccaacca gtaaaggatt 3000 tagcaggacg gaaagtgatg ataactaaaa tgatcactga ctgtgtggcc aatcctcaaa 3060 tgaagcaggt gtttgagcaa cgattggcaa gagccagcac cgaggatgct ctgaatgata 3120 tcaagcgaga catcataagg agcgccatat gaactcacca ggaacaccag actcacggga 3180 aaatccacaa actgaaagcc acaatgattc cctgttaaat aaaaaataag cacgaacaca 3240 agtccaatcc aaccatagca gcaatggccg ggtcacagat caaaatccct cttccaaagc 3300 cccctgattc agactctcaa agactaaatg cattccctgt aatcgtggct caagaaggca 3360 aaggacgact cctcagacag atcagactta ggaaaatatt atcaggggat ccgtctgatc 3420 atcaaattac atttgtgaat acatatggat tcatccgtgc cactccagaa acatccgagt 3480 tcatctctga atcatcacaa cagaaggtga ctcctgtagt gacggcgtgc atgctgtcct 3540 tcggcgctgg accagtccta gaagacccac aacatatgct gaaagctctt gatcagacag 3600 acatcagggt tcggaagaca gcgagtgata aagagcagat cttattcgag atcaaccgca 3660 tccccaatct attcaggcat catcaaatat ctgcggacca tctgattcaa gccagctccg 3720 ataaatatgt caagtcacca gcaaagttga ttgcaggagt aaattacatc tactgtgtca 3780 catttttatc tgtgacagtt tgttctgcct cactcaagtt tcgagttgcg cgcccattgc 3840 ttgctgcacg atctagatta gtaagagcag ttcagatgga agttttgctt cgagtaactt 3900 gcaaaaagga ttcccaaatg gcaaagagca tgttaaatga ccctgatgga gaagggtgca 3960 ttgcatccgt gtggttccac ctgtgtaatc tgtgcaaagg caggaataaa cttagaagtt 4020 acgatgaaaa ttattttgca tctaagtgcc gtaagatgaa tctgacagtc agcataggag 4080 acatgtgggg accaaccatt ctagtccatg caggcggtca cattccgaca actgcaaaac 4140 cttttttcaa ctcaagaggc tgggtctgcc accccatcca ccaatcatca ccatcgttgg 4200 cgaagaccct atggtcatct gggtgtgaaa tcaaggctgc cagtgctatc ctccagggct 4260 cagactatgc atcacttgca aaaactgatg acataatata ttcaaagata aaagtcgata 4320 aagatgcggc caactacaaa ggagtatcct ggagtccatt caggaagtct gcctcaatga 4380 gcaacctatg agaatttcat ctattccccc tgatgcctcc aggagaatca acaatcagtc 4440 cgattttacc ggtggtaact tgattgaaat tatagaaaaa ataagcctag aaggacatct 4500 tacttctcga ctttccaact ttgaaaatag aattgatcag taatcatgaa ggctttttta 4560 gttacttgct taagctttgc agtcttttca tcttctgtat gtgtgaatat caacatcttg 4620 cagcaaattg gatatatcaa gcaacaagtc aggcaactaa gctattactc acaaagttca 4680 agctcctaca tagtggtcaa gcttttaccg aatatccaac ccattgataa cagctgtgaa 4740 tttaagagtg taactcaata caataagacc ttgagtaatt tgcttcttcc aattgcagaa 4800 aacataaaca atattgcatc gccctcatct gggtcaagac ggcataaaag gtttgctggt 4860 attgctattg gcattgctgc gctcggtgtt gcgaccgcag cacaagtaac tgccgctgtc 4920 tcattagttc aagcacagac aaatgcacgt gcaatagcgg cgatgaaaaa ttcaatacaa 4980 gcaactaatc gagcagtctt cgaagtgaag gaaggcactc aacagttagc tatagcggta 5040 caagcaatac aagaccacat caatactatt atgaacaccc aattgaacaa tatgtcttgt 5100 cagatccttg ataaccagct tgcaactttc ctaggattat acctaacaga attaacaaca 5160 gtgtttcagc cacaattaat taatccggca ttgtcaccga ttagtataca agccttgagg 5220 tctttgcttg gaagtatgac gcctgcagtg gtccaagcaa cattatctac ttcaatctct 5280 actgctgaaa tactaagtgc cggtctaatg gagggtcaga ttgtttctgt tctgctagat 5340 gagatgcaga tgatagttaa gataaatatt ccaactattg tcacacaatc aaatgcattg 5400 gtgattgact tctactcaat ttcgagcttt attaataatc aggaatccat aatccaattg 5460 ccagacagaa tcttggagat cgggaatgaa caatggagct atccagctaa aaattgtaag 5520 ttgacaagac accacatatt ctgccaatac aatgaggcag agaggctgag cctagaatca 5580 aaactatgcc ttgcaggcaa tataagtgcc tgtgtgttct cacccatagc agggagttat 5640 atgaggcgat ttacggcact ggatggaaca attgttgcaa actgtcgaag tctaacgtgt 5700 ctatgcaaga atccatctta tcctatatac caacctgacc atcatgcagt cacgaccatt 5760 gatctaaccg catgtcaaac attgtcccta gacggattgg atttcagcat tgtctctcta 5820 agcaacatca cttacgctga gaaccttacc atttcattgt ctcagacaat caatactcaa 5880 cccattgaca tatcaactga actgagtaag gttaatgcat ccctccaaaa tgccgttaag 5940 tacataaagg agagcaacca tcagctccaa tctgtgagtg taaactccaa aatcggagct 6000 ataattgtag cagccttagt tttgagcatt ctgtcaatta tcatttcgct attgttttgc 6060 tgctgggctt acattgcaac taaagaaatc agaagaatca acttcaaaac aaatcatatc 6120 aatacaatat caagtagtgt cgatgatctc attaggtact aatcctaaca ttgtgattca 6180 tcctgcattg agaaaagatt tagaaaaaaa ctaaattaag aatgaatctc ctggggtcgt 6240 aacgtctcgt gaccctgccg ttgcactatg ccggcgatcc aacctccctt atacccaaca 6300 tttctattgc taattcttct ctctctgatc gtaactttgt atgtctggat tatatcaacc 6360 atcacttaca agactgtggt gcgacatgca gcactgtacc agagatcctt ctttcgctgg 6420 agttttgatc actcactcta gaaagatctc cagctgggac aagtcccaat ccatcatgcg 6480 agaacaagct gcatccaaat gatgccgttc aatcatgaga cataaagaaa aaatcaagcc 6540 agaacaagct taggatcaca atacaacaca gaaccccagc tgccatcata actgttctct 6600 ggccgctcga aagatggagc cctcaaaact cttcacaatg tcagacaatg ccacctttgc 6660 acctggacct tttatcaatg cggcagacaa gaagacgttc cgaacctgct tccgaatatt 6720 ggtactgtct gtacaagctg ttacccttat attagttatt gtcactttag gtgagcttgt 6780 gaggatgatc aatgatcaag gcttgagcaa tcagttgtct tcaattgcag acaagataag 6840 agagtcagct actatgattg catctgctgt gggagtaatg aatcaagtta ttcacggagt 6900 aacggtatcc ttacccctac aaattgaggg aaaccaaaat caattgttat ccacacttgc 6960 cacaatctgt acaggcaaaa aacaagtctc aaactgctct acaaacatcc ccttagttaa 7020 tgaccttagg tttataaatg ggatcaataa attcatcatt gaagattatg caactcatga 7080 tttctctatc ggccatccac tcaacatgcc tagctttatc ccaactgcaa cttcacccaa 7140 tggttgcaca agaattccat ccttttctct aggtaagaca cactggtgct acacacataa 7200 tgtaattaat gccaactgca aggatcatac ttcgtctaac caatatattt ccatggggat 7260 actcgttcag accgcgtcag ggtatcctat gttcaaaacc ttaaaaatcc aatatctcag 7320 tgatggcctt aatcggaaaa gctgctcaat tgcaacagtc cctgatggat gcgcaatgta 7380 ctgttacgtc tcaactcaac ttgaaaccaa cgactatgcg gggtccagcc cacctaccca 7440 gaaacttacc ctgttattct ataatgatac cgtcacagaa aggacaatat ctccaactgg 7500 tcttgaaggg aattgggcta ctttggttcc aggagtgggg agtggaatat atttcgagaa 7560 taaattgatt tttcctgcat atgggggtgt cttgcccaat agtacactcg gagttaaatc 7620 agcaagagaa tttttccggc ctgttaatcc atataatcca tgttcaggac cacaacaaga 7680 tttagatcag cgtgctttga gatcatactt cccaagttac ttctctaatc gaagagtaca 7740 gagtgcattt cttgtctgtg cctggaatca gatcctagtt acaaattgcg agctagttgt 7800 cccctcaaac aatcagacac tgatgggtgc agaaggaaga gttttattga tcaataatcg 7860 actattatat tatcagagaa gtaccagctg gtggccgtat gaactcctct atgagatatc 7920 attcacattt acaaactctg gtcaatcatc tgtgaatatg tcctggatac ctatatattc 7980 attcactcgt cctggttcag gcaactgcag tggtaaaaat gtgtgcccaa ctgcttgtgt 8040 gtcaggggtt tatcttgatc cctggccatt aactccatat agccaccaat caggcattaa 8100 ccgaaatttc tatttcacag gcgcactatt aaattcaagc acaactagag taaatcctac 8160 cctttatgtc tctgccctta ataatcttaa agtactagcc ccatatggta atcagggact 8220 gtttgcctcg tacaccacaa ccacctgctt tcaagatacc ggtgatgcta gtgtgtattg 8280 tgtttatatt atggaactag catcgaatat cgttggagaa ttccaaattc tacctgtgct 8340 aaccagattg accatcactt gagtcatagt gaatgcagtg ggaggcccta tgggcgtgct 8400 tcaatcttta tcgattatta agaaaaaaca ggccagaatg gcgggcctaa atgagatact 8460 cttacctgaa gtacatttaa actcacccat cgttagatat aagcttttct actatatatt 8520 gcatggccag ttaccaaatg atttggagcc agatgacttg ggcccactag caaatcagaa 8580 ttggaaggca attcgagctg aagaatctca ggttcatgca cgtttaaaac agatcagagt 8640 agaactcatt gcaaggattc ctagtctccg gtggacccgc tctcagaggg agattgccat 8700 actcatttgg ccaagaatac ttccaatcct gcaagcatat gatcttcggc aaagtatgca 8760 attgcccaca gtatgggaga aattgactca atccacagtt aatcttataa gtgatgggct 8820 agaacgggtt gtattacaca tcagcaatca gctgacaggc aagcctaact tgtttaccag 8880 atctcgagca ggacaagacg caaaggatta ctcaattcca tccactagag agctatctca 8940 aatatggttt aacaacgagt ggagtggatc tgtaaagacc tggcttatga ttaaatatag 9000 aatgaggcag ctaatcacaa accaaaagac aggtgagtta acagatttag taaccattgt 9060 ggatactagg tccactctat gcattattgc cccagaatta gttgctttat actccaatga 9120 gcacaaagca ttaacgtacc tcacctttga aatggtatta atggtcactg atatgttaga 9180 gggacgactt aatgtttctt ctttatgcac agctagtcat tatctgtccc ctctaaagaa 9240 gagaatcgaa attctcctaa cattagttga tgaccttgct ctacttatgg gggacaaagt 9300 atacggtgtt gtctcttcac ttgagagttt tgtttacgcc caattacagt atggtgatcc 9360 tgttgtagac attaagggta cattctacgg atttatatgt aatgagattc tcgacctact 9420 gactgaagac aacatcttta ctgaagagga ggcaaacaag gttcttctgg acttgacatc 9480 acagtttgac aatctatccc ctgatttaac tgctgagctc ctctgcatta tgagactttg 9540 gggccatccc acattaactg ccagccaagc agcatccaag gtccgagagt ccatgtgtgc 9600 tcctaaggtg ttagatttcc aaacaataat gaagaccctg gctttctttc acgcaatcct 9660 gattaacggt tataggagga gccataatgg aatctggcct cctactactc ttcatggcaa 9720 tgcccccaaa agcctcattg agatgcggca tgataattca gagcttaagt atgagtatgt 9780 cctcaagaat tggaaaagta tatctatgtt aagaatacac aaatgctttg atgcatcacc 9840 tgatgaagat ctcagcatat tcatgaaaga taaggcaatc agctgtccaa agcaagactg 9900 gatgggagta tttaggagga gcctgataaa acagcgatat cgtgatgcga atcggcctct 9960 accacaacca ttcaaccgac ggctactgtt gaattttcta gaggatgaca gattcgatcc 10020 cattaaggag cttgagtatg tcaccagtgg agaatatctt agggaccctg aattttgtgc 10080 atcttactct ctcaaggaga aggagataaa ggctacaggt cgcatatttg ccaaaatgac 10140 aaagagaatg aggtcgtgcc aagtaattgc agaatcattg ttggccaatc atgcaggtaa 10200 attaatgaga gagaatggag ttgtcttaga ccagttaaaa ttgacaaaat ctttgttaac 10260 gatgaaccaa attggtatta tatcagagca cagccgaaga tccactgctg acaacatgac 10320 tttggcacac tccggttcaa ataagcacag aattaataat agtcaattca agaagaataa 10380 agacagtaag catgagatgc ctgatgatgg gtttgagata gcagcctgct ttctaacaac 10440 tgacctcaca aaatactgct taaattggag gtaccaagtc atcatcccct ttgcgcgtac 10500 attgaattca atgtatggta taccccacct gtttgaatgg atacatttaa ggctaatgcg 10560 aagcactctc tatgttggtg atcccttcaa tcctccatca gatcctaccc aacttgacct 10620 tgatacagct ctcaatgatg atatatttat agtttctcct cgtggaggaa tcgagggttt 10680 atgtcaaaaa ttatggacta tgatttccat ctcgacaatc atattatccg caactgaggc 10740 aaacactaga gttatgagca tggttcaggg tgacaaccaa gcaattgcaa tcaccactag 10800 agtagtacgc tcgctcagtc attccgagaa gaaggagcaa gcttataaag caagtaaatt 10860 attctttgaa aggcttaaag ctaacaacca tggaattgga caccacttaa aagaacaaga 10920 aacaatcctt agttctgatt tcttcatata cagtaagagg gtgttttaca aaggtcgaat 10980 tttgactcaa gcgttaaaga acgtgagcaa gatgtgctta acagctgaca tactagggga 11040 ctgttcacaa gcatcatgct ccaatttagc tactactgta atgcgcctga ctgagaatgg 11100 ggtcgagaaa gatttgtgtt attttctaaa tgcattcatg acaatcagac aattatgtta 11160 tgatctggta ttcccccaaa ctaaatctct tagtcaggac atcactaatg cttatcttaa 11220 tcatccaata cttatctcaa gattgtgtct attaccatct caattagggg gcctaaactt 11280 tctctcgtgt agtcgcctgt tcaatagaaa cataggagac ccattagtgt ctgcaattgc 11340 tgatgtgaaa cgattaatta aagctggctg tctagatatc tgggtcctgt ataacatcct 11400 tgggaggagg cctggaaaag gtaagtggag cactctggca gctgatcctt atactttaaa 11460 catagattat ttagttcctt caacaacttt tttaaagaag catgcccaat atacattgat 11520 ggaacggagt gttaatccca tgctccgtgg agtattcagc gaaaatgcag ctgaggaaga 11580 agaggaactc gcacagtatc tattagatcg tgaggtagtc atgcccagag ttgcacatgt 11640 aatacttgcc cagtctagtt gcggcagaag aaaacagatt caaggttact ttgattccac 11700 tagaactatt atcaggtatt cactggaggt gagaccattg tcagcaaaga agctgaatac 11760 agtaatagaa tataacttat tgtatctttc ctacaatttg gagattattg aaaaacccaa 11820 tatagtccaa ccttttttga atgcaatcaa tgttgatact tgtagcatcg atatagctag 11880 gtcccttaga aaactatcct gggcaacttt actgaacgga cgtcccatcg agggattaga 11940 aacacctgat cccattgaat tggtacatgg gtgtttgatc attgggtcag atgaatgtga 12000 gcattgcagc agtggtgatg acaagttcac ctggtttttc ctacccaagg ggataaggct 12060 agataatgat ccggcgtcca acccacccat cagagtacct tatattggat ctaaaacaga 12120 tgaacggagg gttgcgtcaa tggcttacat caaaggagca tctgtatcac ttaaatcagc 12180 actcagacta gcgggagtat atatttgggc tttcggagat acagaggaat catggcagga 12240 tgcctatgag ttagcttcca ctcgtgttaa tctcacacta gagcaattgc aatctctcac 12300 tcctttacca acatctgcta acctagtcca cagattggat gatggcacta ctcaattaaa 12360 atttacccct gcaagctcct atgcattctc tagcttcgtt catatatcta atgactgtca 12420 agttcttgag atcgatgatc aggtaacaga ttctaacctg atttaccagc aagttatgat 12480 tactggcctt gctttaattg agacatggaa caatcctcca atcaacttct ccgtttatga 12540 aactacacta cacttgcaca caggctcatc ttgctgtata agacctgtcg agtcttgtgt 12600 agtaaatcct cctttgcttc ctgtcccctt cattaatgtc cctcaaatga ataaatttgt 12660 atatgaccct gaaccgctca gtttgctaga gatggaaaaa attgaggaca ttgcttatca 12720 aaccagaatt ggtggtttag atcaaatccc acttctggaa aaaataccct tactagctca 12780 cctcaccgcc aagcagatgg taaatagcat caccgggctt gatgaagcaa catctatagt 12840 aaatgacgct gtggttcaag cagactatac tagcaattgg attagtgaat gctgttacac 12900 ttacattgat tctgtgtttg tttactctgg ctgggcatta ttattggaac tttcgtacca 12960 aatgtactac ttaagaattc aaggcatcca aggaattcta gactatgtgt atatgacctt 13020 gaggaggata ccaggaatgg ctataacggg catctcatcc acaattagtc accctcgtat 13080 actcagaaga tgcatcaatc tggatgtcat agcccctatc aattctccac acatagcttc 13140 actggattac acaaaattga gcatagacgc agtaatgtgg ggaactaagc aggttttgac 13200 caacatttcg caaggtatcg attatgagat agttgttcct tctgaaagcc aactcacact 13260 cagtgataga gttctaaatc tagttgctcg aaaactatca ctactggcaa tcatctgggc 13320 caattataac tatcctccaa aggttaaagg tatgtcacct gaggacaaat gtcaggcttt 13380 aactacccat ctactccaaa ctgtcgaata tgttgagcac attcagattg aaaagacgaa 13440 catcaggagg atgattattg aaccaaaatt aactgcctac cctagtaatt tgttttatct 13500 atctcgaaag ctgcttaatg caattcgaga ttctgaagaa ggacaatttc tgattgcatc 13560 ctattataac agctttggat atctggaacc aatactaatg gaatctaaaa tattcaatct 13620 aagttcatcc gaatcagcat cccttacaga atttgatttc atcctcaact tggaattgtc 13680 tgaagccagc cttgagaaat actctctccc aagtttgctt atgacggctg agaatatgga 13740 taacccattt cctcaacccc ccctccatca tgttctcaga ccactaggtt tatcatccac 13800 atcatggtat aaaacaatca gtgttttgaa ttatattagc catatgaaga tatctgacgg 13860 tgcccatcta tatttggcag agggaagtgg agcctctatg tcacttatag agactttctt 13920 gcccggtgaa gtaatatggt acaacagcct attcaatagt ggtgagaatc ctccccaacg 13980 caattttgcc cctttaccca cccagtttat tgaaagtgtc ccttacagat tgattcaagc 14040 aggtatagca gcaggaagtg gtgtagttca aagtttctat ccactctgga acggtaatag 14100 cgatatcact gacttaagca cgaaaactag tgtcgagtac attattcaca aggtaggggc 14160 tgatacatgt gcattggttc atgtggatct ggagggtgta cccggctcaa tgaacagtat 14220 gttggagaga gcccaagttc atgcgctact gatcacggta actgtactaa agccaggtgg 14280 cttactaatc ttgaaagctt catgggaacc ttttaatcga ttttcctttt tactcacaat 14340 actctggcaa ttcttttcaa caataaggat ccttcgatct tcatactccg acccgaataa 14400 tcacgaggta tacataatag ctacattagc tgttgatccc accacatcct cctttacaac 14460 cgctctgaat agggcgcgta ctctgaatga acagggcttt tcactcatcc cacctgaatt 14520 agtgagtgag tactggagga ggcgtgttga acaagggcag attatacagg attgtataga 14580 taaagtcata tcagagtgtg ttagagacca atatctggca gacaacaata ttatccttca 14640 ggcggggggg actccaagca caagaaaatg gttggatctg cctgactatc cgtcgttcaa 14700 tgaattacaa tcggagatgg ccagactcat aacaattcat cttaaagagg taatagaaat 14760 cctaaagggc caatcatcag atcatgacac cctattattt acttcataca atgtaggtcc 14820 cctcgggaaa ataaatacaa tactcagatt gattgttgag agaattctta tgtacactgt 14880 aaggaactgg tgcatcttgc ccactcaaac tcgtctcacc ttacgacagt ctatcgagct 14940 tggagagttt agactaagag acgtgataac acccatggag atcctaaagc tatcccccaa 15000 ccggaagtat ctgaagtctg cattaaacca atcaacattc aatcatctaa tgggagaaac 15060 atctgacatg ttgttaaatc gatcctatca aaaaagaatt tggaaagcca ttgggtgtgt 15120 aatctattgc tttggtttgc ttacccctga tgttgaagat tctgagcgca ttgatattga 15180 caatgatata cctgattatg atatccacgg ggacataatt taaatcgact aaagactcct 15240 ctggcatgat acgtcaccaa aaggttccac accagcatcc aaattcttct agaccgtaca 15300 cgacctcgaa caatcataac cacatcagta ttaaatccat aatatcattt taagaaaaaa 15360 ttgattttac tttctcccct tggtc 15385 // ID AB000387; SV 2; linear; genomic RNA; STD; VRL; 15384 BP. XX AC AB000387; XX DT 17-FEB-1997 (Rel. 50, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 5) XX DE Mumps virus cDNA sequence of the genomic RNA, complete sequence, DE polymorphism. XX KW . XX OS Mumps rubulavirus OC Viruses; Riboviria; Negarnaviricota; Haploviricotina; Monjiviricetes; OC Mononegavirales; Paramyxoviridae; Rubulavirus. XX RN [1] RP 1-15384 RA Mori C.; RT ; RL Submitted (10-JAN-1997) to the INSDC. RL Chisato Mori, The Research Foundation for Microbial Diseases of Osaka Univ RL ., Kanonji Institute, Research and Development Division; 2-9-41, RL Yahata-cho, Kanonji city, Kagawa, 768, Japan (E-mail:biken-rd@niji.or.jp, RL Tel:0875-25-4171, Fax:0875-23-1660) XX RN [2] RA Mori C., Fujita J., Tooriyama T., Takahara R., Takamizawa A.; RT "Complete Nucleotide Sequence of the Mumps Virus Urabe Vaccine Strain RT Genomic cDNA"; RL Rinsho To Uirusu 23:341-352(1995). XX DR MD5; 71584fc341d9e6baceb2ee84fe498e85. XX FH Key Location/Qualifiers FH FT source 1..15384 FT /organism="Mumps rubulavirus" FT /strain="Urabe AM-9-B" FT /mol_type="genomic RNA" FT /note="This sequence is complementary to the genomic FT sequence" FT /db_xref="taxon:1979165" FT variation 9972 FT /replace="c" FT /note="within variation of the strain" XX SQ Sequence 15384 BP; 4731 A; 3408 C; 3142 G; 4103 T; 0 other; accaagggga aaatggagat gggatgttgg tagaacaaat agtgtaagaa acagtaagcc 60 cggaagtggt gttttgcgat ttcgaggccg ggctcgatcc tcacctttca ttgtcgatag 120 gggacatttt gacactacct ggaaaatgtc gtctgtgctc aaagcatttg agcgattcac 180 gatagaacag gaacttcaag acaggggtga ggagggttca attccgccgg agactttaaa 240 gtcagcagtc aaagtcttcg ttattaacac acccaatccc accacacgct accagatgct 300 aaacttttgc ctaaggataa tctgcagtca aaatgctagg gcatctcaca gggtaggtgc 360 attgataaca ttattctcac ttccctcagc aggcatgcaa aatcatatta gattagcaga 420 tagatcacct gaagctcaga tagaacgctg tgagattgac ggttttgagc ctggcacata 480 taggctaatt ccgaatgcac gcgccaatct tactgccaat gaaattgctg cctatgcttt 540 gcttgcagac gacctccctc caaccataaa taatggaact ccctatgtac atgcagatgt 600 tgaaggacag ccatgtgatg agattgagca attcctagat cgatgctaca gtgtactaat 660 ccaggcttgg gtgatggtct gtaaatgtat gacagcgtac gaccaacatg ctggatctgc 720 tgatcggcgg tttgcaaaat accagcaaca aggtcgcctg gaagcaagat acatgctgca 780 gccggaggcc caaaggttga tccaaactgc catcaggaaa agtcttgttg ttagacagta 840 ccttactttc gaactccagt tggcaagacg gcaggggttg ctatcaaaca gatactatgc 900 aatggtgggt gacattggaa agtacattga gaattcaggc cttactgcct tctttctcac 960 cctcaaatat gcactaggta ccaaatggag tcctctgtca ttggccgcat tcaccggtga 1020 actcactaag ctccgatccc tgatgatgtt atatcgagat ctcggagaac aagccagata 1080 ccttgctttg ttggaggctc cccaaataat ggactttgca cccggaggct acccattgat 1140 attcagttat gctatgggag tcggtacagt cctagatgtc caaatgcgaa attacactta 1200 tgcacgacct ttcctaaatg gttattattt ccagattggg gttgagactg cacgacggca 1260 acaaggcact gttgataaca gagtagcaga tgatctaggc ctgactcctg agcaaaggac 1320 tgaggttact caacttgttg acaggcttgc aaggggcaga ggtgcgggga taccaggtgg 1380 gcccgtgaat ccttttgttc ctccagttca acagcaacaa cctgctgccg cacatgagga 1440 cacccctgca ttggaggaat cagacgacga cggcgatgaa gacgggggtg caggactcca 1500 aaatggagca caagcaccag ctgcaagaca gggaggccaa aatgacttca gagtacagcc 1560 actacaggat ccaattcaag cacaactttt catgccatta tatcctcaag tcagcaacat 1620 cccaaatcat cagaatcatc agatcaatcg cgtcgggggg atggaacacc aagatttatt 1680 acgatacaac gagaatggtg atcctcaaca agatgcaagg ggcgaacacg gaaacacctt 1740 cccaaacaat cctaatcaaa acgcacagtc gcaagtgggc gactgggatg agtaaatcac 1800 tgacatgatc aaactacccc caattgcaat aaccccagga caatctagcc acagctaact 1860 gcccaaatcc actacattcc attcatattt agtctttaag aaaaaattag gcccggaaag 1920 aattagttct acgagcatcg acacaattat cttgatcgtg tttctttccg ggcaagccat 1980 ggaccaattt ataaaacaag atgagactgg tgatttaatt gagacaggaa tgaacgttgc 2040 aaatcatttc ctatccgccc ccattcaggg aaccaactcg ttgagcaagg ccacaatcat 2100 ccctggcgtt gcaccagtac tcattggcaa tccagagcaa aagaacattc agtaccccac 2160 cacatcacat caggggtcca agtcaaaggg cagaggctca ggggccaggc ccatcatagt 2220 ctcatcctcc gaaggaggca ctggagggac tcagattcct gagccccttt tcgcacaaac 2280 aggacaaggt ggcattgtca ccaccgttta tcaggatcca actatccaac caacaggttc 2340 atatcgaagt gtggaattgg ctaagatagg aaaagagaga atgattaatc gatttgttga 2400 aaaaccaaga acctcaacgc cggtaacaga atttaagagg ggggccggga gcggctgctc 2460 aaggccagac aatccaagag gagggcatag acgggaatgg agcctcagct gggtccaagg 2520 agaggtccgg gtctttgagt ggtgcaaccc catatgctca cctatcactg ccacagcaag 2580 attccactcc tgcaaatgtg ggaattgccc cgcaaagtgc gatcagtgcg aacgagatta 2640 tggacctcct tagagggatg gatgctcgcc tgcaacatct tgaacaaaag gtggacaagg 2700 tgcttgcaca gggcagcatg gtgacccaaa taaagaatga attatcaaca gtaaagacaa 2760 cactagctac aattgaagga atgatggcga cagtaaagat catggatcct ggaaacccga 2820 caggggtccc agttgatgag cttagaagaa gttttagtga tcatgtaaca attgttagtg 2880 gaccaggaga tgtgtcattc agctccggtg aagaacccac actgtatttg gatgaactag 2940 cgaggcctgt cccaaagccc cgtcctgcaa agcagccaaa accccaacca gtaaaggatt 3000 tagcaggacg gaaagtgatg ataactaaaa tgatcactga ctgtgtggcc aatcctcaaa 3060 tgaagcaggt gtttgagcaa cgattggcaa gagccagcac cgaggatgct ctgaatgata 3120 tcaagcgaga catcataagg agcgccatat gaactcacca ggaacaccag actcacggga 3180 aaatccacaa actgaaagcc acaatgattc cctgttaaat aaaaaataag cacgaacaca 3240 agtccaatcc aaccatagca gcaatggccg ggtcacagat caaaatccct cttccaaagc 3300 cccctgattc agactctcaa agactaaatg cattccctgt aatcgtggct caagaaggca 3360 aaggacgact cctcagacag atcagactta ggaaaatatt atcaggggat ccgtctgatc 3420 atcaaattac atttgtgaat acatatggat tcatccgtgc cactccagaa acatccgagt 3480 tcatctctga atcatcacaa cagaaggtga ctcctgtagt gacggcgtgc atgctgtcct 3540 tcggcgctgg accagtccta gaagacccac aacatatgct gaaagctctt gatcagacag 3600 acatcagggt tcggaagaca gcgagtgata aagagcagat cttattcgag atcaaccgca 3660 tccccaatct attcaggcat catcaaatat ctgcggacca tctgattcaa gccagctccg 3720 ataaatatgt caagtcacca gcaaagttga ttgcaggagt aaattacatc tactgtgtca 3780 catttttatc tgtgacagtt tgttctgcct cactcaagtt tcgagttgcg cgcccattgc 3840 ttgctgcacg atctagatta gtaagagcag ttcagatgga agttttgctt cgagtaactt 3900 gcaaaaagga ttcccaaatg gcaaagagca tgttaaatga ccctgatgga gaagggtgca 3960 ttgcatccgt gtggttccac ctgtgtaatc tgtgcaaagg caggaataaa cttagaagtt 4020 acgatgaaaa ttattttgca tctaagtgcc gtaagatgaa tctgacagtc agcataggag 4080 acatgtgggg accaaccatt ctagtccatg caggcggtca cattccgaca actgcaaaac 4140 cttttttcaa ctcaagaggc tgggtctgcc accccatcca ccaatcatca ccatcgttgg 4200 cgaagaccct atggtcatct gggtgtgaaa tcaaggctgc cagtgctatc ctccagggct 4260 cagactatgc atcacttgca aaaactgatg acataatata ttcaaagata aaagtcgata 4320 aagatgcggc caactacaaa ggagtatcct ggagtccatt caggaagtct gcctcaatga 4380 gcaacctatg agaatttcat ctattccccc tgatgcctcc aggagaatca acaatcagtc 4440 cgattttacc ggtggtaact tgattgaaat tatagaaaaa ataagcctag aaggacatct 4500 tacttctcga ctttccaact ttgaaaatag aattgatcag taatcatgaa ggctttttta 4560 gttacttgct taagctttgc agtcttttca tcttctgtat gtgtgaatat caacatcttg 4620 cagcaaattg gatatatcaa gcaacaagtc aggcaactaa gctattactc acaaagttca 4680 agctcctaca tagtggtcaa gcttttaccg aatatccaac ccattgataa cagctgtgaa 4740 tttaagagtg taactcaata caataagacc ttgagtaatt tgcttcttcc aattgcagaa 4800 aacataaaca atattgcatc gccctcatct gggtcaagac ggcataaaag gtttgctggt 4860 attgctattg gcattgctgc gctcggtgtt gcgaccgcag cacaagtaac tgccgctgtc 4920 tcattagttc aagcacagac aaatgcacgt gcaatagcgg cgatgaaaaa ttcaatacaa 4980 gcaactaatc gagcagtctt cgaagtgaag gaaggcactc aacagttagc tatagcggta 5040 caagcaatac aagaccacat caatactatt atgaacaccc aattgaacaa tatgtcttgt 5100 cagatccttg ataaccagct tgcaactttc ctaggattat acctaacaga attaacaaca 5160 gtgtttcagc cacaattaat taatccggca ttgtcaccga ttagtataca agccttgagg 5220 tctttgcttg gaagtatgac gcctgcagtg gtccaagcaa cattatctac ttcaatctct 5280 actgctgaaa tactaagtgc cggtctaatg gagggtcaga ttgtttctgt tctgctagat 5340 gagatgcaga tgatagttaa gataaatatt ccaactattg tcacacaatc aaatgcattg 5400 gtgattgact tctactcaat ttcgagcttt attaataatc aggaatccat aatccaattg 5460 ccagacagaa tcttggagat cgggaatgaa caatggagct atccagctaa aaattgtaag 5520 ttgacaagac accacatatt ctgccaatac aatgaggcag agaggctgag cctagaatca 5580 aaactatgcc ttgcaggcaa tataagtgcc tgtgtgttct cacccatagc agggagttat 5640 atgaggcgat ttacggcact ggatggaaca attgttgcaa actgtcgaag tctaacgtgt 5700 ctatgcaaga atccatctta tcctatatac caacctgacc atcatgcagt cacgaccatt 5760 gatctaaccg catgtcaaac attgtcccta gacggattgg atttcagcat tgtctctcta 5820 agcaacatca cttacgctga gaaccttacc atttcattgt ctcagacaat caatactcaa 5880 cccattgaca tatcaactga actgagtaag gttaatgcat ccctccaaaa tgccgttaag 5940 tacataaagg agagcaacca tcagctccaa tctgtgagtg taaactccaa aatcggagct 6000 ataattgtag cagccttagt tttgagcatt ctgtcaatta tcatttcgct attgttttgc 6060 tgctgggctt acattgcaac taaagaaatc agaagaatca acttcaaaac aaatcatatc 6120 aatacaatat caagtagtgt cgatgatctc attaggtact aatcctaaca ttgtgattca 6180 tcctgcattg agaaaagatt tagaaaaaaa ctaaattaag aatgaatctc ctggggtcgt 6240 aacgtctcgt gaccctgccg ttgcactatg ccggcgatcc aacctccctt atacccaaca 6300 tttctattgc taattcttct ctctctgatc gtaactttgt atgtctggat tatatcaacc 6360 atcacttaca agactgtggt gcgacatgca gcactgtacc agagatcctt ctttcgctgg 6420 agttttgatc actcactcta gaaagatctc cagctgggac aagtcccaat ccatcatgcg 6480 agaacaagct gcatccaaat gatgccgttc aatcatgaga cataaagaaa aaatcaagcc 6540 agaacaagct taggatcaca atacaacaca gaaccccagc tgccatcata actgttctct 6600 ggccgctcga aagatggagc cctcaaaact cttcacaatg tcagacaatg ccacctttgc 6660 acctggacct tttatcaatg cggcagacaa gaagacgttc cgaacctgct tccgaatatt 6720 ggtactgtct gtacaagctg ttacccttat attagttatt gtcactttag gtgagcttgt 6780 gaggatgatc aatgatcaag gcttgagcaa tcagttgtct tcaattgcag acaagataag 6840 agagtcagct actatgattg catctgctgt gggagtaatg aatcaagtta ttcacggagt 6900 aacggtatcc ttacccctac aaattgaggg aaaccaaaat caattgttat ccacacttgc 6960 cacaatctgt acaggcaaaa aacaagtctc aaactgctct acaaacatcc ccttagttaa 7020 tgaccttagg tttataaatg ggatcaataa attcatcatt gaagattatg caactcatga 7080 tttctctatc ggccatccac tcaacatgcc tagctttatc ccaactgcaa cttcacccaa 7140 tggttgcaca agaattccat ccttttctct aggtaagaca cactggtgct acacacataa 7200 tgtaattaat gccaactgca aggatcatac ttcgtctaac caatatattt ccatggggat 7260 actcgttcag accgcgtcag ggtatcctat gttcaaaacc ttaaaaatcc aatatctcag 7320 tgatggcctt aatcggaaaa gctgctcaat tgcaacagtc cctgatggat gcgcaatgta 7380 ctgttacgtc tcaactcaac ttgaaaccga cgactatgcg gggtccagcc cacctaccca 7440 gaaacttacc ctgttattct ataatgatac cgtcacagaa aggacaatat ctccaactgg 7500 tcttgaaggg aattgggcta ctttggttcc aggagtgggg agtggaatat atttcgagaa 7560 taaattgatt tttcctgcat atgggggtgt cttgcccaat agtacactcg gagttaaatc 7620 agcaagagaa tttttccggc ctgttaatcc atataatcca tgttcaggac cacaacaaga 7680 tttagatcag cgtgctttga gatcatactt cccaagttac ttctctaatc gaagagtaca 7740 gagtgcattt cttgtctgtg cctggaatca gatcctagtt acaaattgcg agctagttgt 7800 cccctcaaac aatcagacac tgatgggtgc agaaggaaga gttttattga tcaataatcg 7860 actattatat tatcagagaa gtaccagctg gtggccgtat gaactcctct atgagatatc 7920 attcacattt acaaactctg gtcaatcatc tgtgaatatg tcctggatac ctatatattc 7980 attcactcgt cctggttcag gcaactgcag tggtgaaaat gtgtgcccaa ctgcttgtgt 8040 gtcaggggtt tatcttgatc cctggccatt aactccatat agccaccaat caggcattaa 8100 ccgaaatttc tatttcacag gcgcactatt aaattcaagc acaactagag taaatcctac 8160 cctttatgtc tctgccctta ataatcttaa agtactagcc ccatatggta atcagggact 8220 gtttgcctcg tacaccacaa ccacctgctt tcaagatacc ggtgatgcta gtgtgtattg 8280 tgtttatatt atggaactag catcgaatat cgttggagaa ttccaaattc tacctgtgct 8340 aaccagattg accatcactt gagtcatagt gaatgcagtg ggaggcccta tgggcgtgct 8400 tcaatcttta tcgattatta agaaaaaaca ggccagaatg gcgggcctaa atgagatact 8460 cttacctgaa gtacatttaa actcacccat cgttagatat aagcttttct actatatatt 8520 gcatggccag ttaccaaatg atttggagcc agatgacttg ggcccactag caaatcagaa 8580 ttggaaggca attcgagctg aagaatctca ggttcatgca cgtttaaaac agatcagagt 8640 agaactcatt gcaaggattc ctagtctccg gtggacccgc tctcagaggg agattgccat 8700 actcatttgg ccaagaatac ttccaatcct gcaagcatat gatcttcggc aaagtatgca 8760 attgcccaca gtatgggaga aattgactca atccacagtt aatcttataa gtgatgggct 8820 agaacgggtt gtattacaca tcagcaatca gctgacaggc aagcctaact tgtttaccag 8880 atctcgagca ggacaagacg caaaggatta ctcaattcca tccactagag agctatctca 8940 aatatggttt aacaacgagt ggagtggatc tgtaaagacc tggcttatga ttaaatatag 9000 aatgaggcag ctaatcacaa accaaaagac aggtgagtta acagatttag taaccattgt 9060 ggatactagg tccactctat gcattattgc cccagaatta gttgctttat actccaatga 9120 gcacaaagca ttaacgtacc tcacctttga aatggtatta atggtcactg atatgttaga 9180 gggacgactt aatgtttctt ctttatgcac agctagtcat tatctgtccc ctctaaagaa 9240 gagaatcgaa attctcctaa cattagttga tgaccttgct ctacttatgg gggacaaagt 9300 atacggtgtt gtctcttcac ttgagagttt tgtttacgcc caattacagt atggtgatcc 9360 tgttgtagac attaagggta cattctacgg atttatatgt aatgagattc tcgacctact 9420 gactgaagac aacatcttta ctgaagagga ggcaaacaag gttcttctgg acttgacatc 9480 acagtttgac aatctatccc ctgatttaac tgctgagctc ctctgcatta tgagactttg 9540 gggccatccc acattaactg ccagccaagc agcatccaag gtccgagagt ccatgtgtgc 9600 tcctaaggtg ttagatttcc aaacaataat gaagaccctg gctttctttc acgcaatcct 9660 gattaacggt tataggagga gccataatgg aatctggcct cctactactc ttcatggcaa 9720 tgcccccaaa agcctcattg agatgcggca tgataattca gagcttaagt atgagtatgt 9780 cctcaagaat tggaaaagta tatctatgtt aagaatacac aaatgctttg atgcatcacc 9840 tgatgaagat ctcagcatat tcatgaaaga taaggcaatc agctgtccaa agcaagactg 9900 gatgggagta tttaggagga gcctgataaa acagcgatat cgtgatgcga atcggcctct 9960 accacaacca ttcaaccgac ggctactgtt gaattttcta gaggatgaca gattcgatcc 10020 cattaaggag cttgagtatg tcaccagtgg agaatatctt agggaccctg aattttgtgc 10080 atcttactct ctcaaggaga aggagataaa ggctacaggt cgcatatttg ccaaaatgac 10140 aaagagaatg aggtcgtgcc aagtaattgc agaatcattg ttggccaatc atgcaggtaa 10200 attaatgaga gagaatggag ttgtcttaga ccagttaaaa ttgacaaaat ctttgttaac 10260 gatgaaccaa attggtatta tatcagagca cagccgaaga tccactgctg acaacatgac 10320 tttggcacac tccggttcaa ataagcacag aattaataat agtcaattca agaagaataa 10380 agacagtaag catgagatgc ctgatgatgg gtttgagata gcagcctgct ttctaacaac 10440 tgacctcaca aaatactgct taaattggag gtaccaagtc atcatcccct ttgcgcgtac 10500 attgaattca atgtatggta taccccacct gtttgaatgg atacatttaa ggctaatgcg 10560 aagcactctc tatgttggtg atcccttcaa tcctccatca gatcctaccc aacttgacct 10620 tgatacagct ctcaatgatg atatatttat agtttctcct cgtggaggaa tcgagggttt 10680 atgtcaaaaa ttatggacta tgatttccat ctcgacaatc atattatccg caactgaggc 10740 aaacactaga gttatgagca tggttcaggg tgacaaccaa gcaattgcaa tcaccactag 10800 agtagtacgc tcgctcagtc attccgagaa gaaggagcaa gcttataaag caagtaaatt 10860 attctttgaa aggcttaaag ctaacaacca tggaattgga caccacttaa aagaacaaga 10920 aacaatcctt agttctgatt tcttcatata cagtaagagg gtgttttaca aaggtcgaat 10980 tttgactcaa gcgttaaaga acgtgagcaa gatgtgctta acagctgaca tactagggga 11040 ctgttcacaa gcatcatgct ccaatttagc tactactgta atgcgcctga ctgagaatgg 11100 ggtcgagaaa gatttgtgtt attttctaaa tgcattcatg acaatcagac aattatgtta 11160 tgatctggta ttcccccaaa ctaaatctct tagtcaggac atcactaatg cttatcttaa 11220 tcatccaata cttatctcaa gattgtgtct attaccatct caattagggg gcctaaactt 11280 tctctcgtgt agtcgcctgt tcaatagaaa cataggagac ccattagtgt ctgcaattgc 11340 tgatgtgaaa cgattaatta aagctggctg tctagatatc tgggtcctgt ataacatcct 11400 tgggaggagg cctggaaaag gtaagtggag cactctggca gctgatcctt atactttaaa 11460 catagattat ttagttcctt caacaacttt tttaaagaag catgcccaat atacattgat 11520 ggaacggagt gttaatccca tgctccgtgg agtattcagc gaaaatgcag ctgaggaaga 11580 agaggaactc gcacagtatc tattagatcg tgaggtagtc atgcccagag ttgcacatgt 11640 aatacttgcc cagtctagtt gcggcagaag aaaacagatt caaggttact tggattccac 11700 tagaactatt atcaggtatt cactggaggt gagaccattg tcagcaaaga agctgaatac 11760 agtaatagaa tataacttat tgtatctttc ctacaatttg gagattattg aaaaacccaa 11820 tatagtccaa ccttttttga atgcaatcaa tgttgatact tgtagcatcg atatagctag 11880 gtcccttaga aaactatcct gggcaacttt actgaacgga cgtcccatcg agggattaga 11940 aacacctgat cccattgaat tggtacatgg gtgtttgatc attgggtcag atgaatgtga 12000 gcattgcagc agtggtgatg acaagttcac ctggtttttc ctacccaagg ggataaggct 12060 agataatgat ccggcgtcca acccacccat cagagtacct tatattggat ctaaaacaga 12120 tgaacggagg gttgcgtcaa tggcttacat caaaggagca tctgtatcac ttaaatcagc 12180 actcagacta gcgggagtat atatttgggc tttcggagat acagaggaat catggcagga 12240 tgcctatgag ttagcttcca ctcgtgttaa tctcacacta gagcaattgc aatctctcac 12300 tcctttacca acatctgcta acctagtcca cagattggat gatggcacta ctcaattaaa 12360 atttacccct gcaagctcct atgcattctc tagcttcgtt catatatcta atgactgtca 12420 agttcttgag atcgatgatc aggtaacaga ttctaacctg atttaccagc aagttatgat 12480 tactggcctt gctttaattg agacatggaa caatcctcca atcaacttct ccgtttatga 12540 aactacacta cacttgcaca caggctcatc ttgctgtata agacctgtcg agtcttgtgt 12600 agtaaatcct cctttgcttc ctgtcccctt cattaatgtc cctcaaatga ataaatttgt 12660 atatgaccct gaaccgctca gtttgctaga gatggaaaaa attgaggaca ttgcttatca 12720 aaccagaatt ggtggtttag atcaaatccc acttctggaa aaaataccct tactagctca 12780 cctcaccgcc aagcagatgg taaatagcat caccgggctt gatgaagcaa catctatagt 12840 aaatgacgct gtggttcaag cagactatac tagcaattgg attagtgaat gctgttacac 12900 ttacattgat tctgtgtttg tttactctgg ctgggcatta ttattggaac tttcgtacca 12960 aatgtactac ttaagaattc aaggcatcca aggaattcta gactatgtgt atatgacctt 13020 gaggaggata ccaggaatgg ctataacggg catctcatcc acaattagtc accctcgtat 13080 actcagaaga tgcatcaatc tggatgtcat agcccctatc aattctccac acatagcttc 13140 actggattac acaaaattga gcatagacgc agtaatgtgg ggaactaagc aggttttgac 13200 caacatttcg caaggtatcg attatgagat agttgttcct tctgaaagcc aactcacact 13260 cagtgataga gttctaaatc tagttgctcg aaaactatca ctactggcaa tcatctgggc 13320 caattataac tatcctccaa aggttaaagg tatgtcacct gaggacaaat gtcaggcttt 13380 aactacccat ctactccaaa ctgtcgaata tgttgagcac attcagattg aaaagacgaa 13440 catcaggagg atgattattg aaccaaaatt aactgcctac cctagtaatt tgttttatct 13500 atctcgaaag ctgcttaatg caattcgaga ttctgaagaa ggacaatttc tgattgcatc 13560 ctattataac agctttggat atctggaacc aatactaatg gaatctaaaa tattcaatct 13620 aagttcatcc gaatcagcat cccttacaga atttgatttc atcctcaact tggaattgtc 13680 tgaagccagc cttgagaaat actctctccc aagtttgctt atgacggctg agaatatgga 13740 taacccattt cctcaacccc ccctccatca tgttctcaga ccactaggtt tatcatccac 13800 atcatggtat aaaacaatca gtgttttgaa ttatattagc catatgaaga tatctgacgg 13860 tgcccatcta tatttggcag agggaagtgg agcctctatg tcacttatag agactttctt 13920 gcccggtgaa gtaatatggt acaacagcct attcaatagt ggtgagaatc ctccccaacg 13980 caattttgcc cctttaccca cccagtttat tgaaagtgtc ccttacagat tgattcaagc 14040 aggtatagca gcaggaagtg gtgtagttca aagtttctat ccactctgga acggtaatag 14100 cgatatcact gacttaagca cgaaaactag tgtcgagtac attattcaca aggtaggggc 14160 tgatacatgt gcattggttc atgtggatct ggagggtgta cccggctcaa tgaacagtat 14220 gttggagaga gcccaagttc atgcgctact gatcacggta actgtactaa agccaggtgg 14280 cttactaatc ttgaaagctt catgggaacc ttttaatcga ttttcctttt tactcacaat 14340 actctggcaa ttcttttcaa caataaggat ccttcgatct tcatactccg acccgaataa 14400 tcacgaggta tacataatag ctacattagc tgttgatccc accacatcct cctttacaac 14460 cgctctgaat agggcgcgta ctctgaatga acagggcttt tcactcatcc cacctgaatt 14520 agtgagtgag tactggagga ggcgtgttga acaagggcag attatacagg attgtataga 14580 taaagtcata tcagagtgtg ttagagacca atatctggca gacaacaata ttatccttca 14640 ggcggggggg actccaagca caagaaaatg gttggatctg cctgactatc cgtcgttcaa 14700 tgaattacaa tcggagatgg ccagactcat aacaattcat cttaaagagg taatagaaat 14760 cctaaagggc caatcatcag atcatgacac cctattattt acttcataca atgtaggtcc 14820 cctcgggaaa ataaatacaa tactcagatt gattgttgag agaattctta tgtacactgt 14880 aaggaactgg tgcatcttgc ccactcaaac tcgtctcacc ttacgacagt ctatcgagct 14940 tggagagttt agactaagag acgtgataac acccatggag atcctaaagc tatcccccaa 15000 ccggaagtat ctgaagtctg cattaaacca atcaacattc aatcatctaa tgggagaaac 15060 atctgacatg ttgttaaatc gatcctatca aaaaagaatt tggaaagcca ttgggtgtgt 15120 aatctattgc tttggtttgc ttacccctga tgttgaagat tctgagcgca ttgatattga 15180 caatgatata cctgattatg atatccacgg ggacataatt taaatcgact aaagactcct 15240 ctggcatgat acgtcaccaa aaggttccac accagcatcc aaattcttct agaccgtaca 15300 cgacctcgaa caatcataac cacatcagta ttaaatccat aatatcattt taagaaaaaa 15360 ttgattttac tttctcccct tggt 15384 // ID AB000388; SV 2; linear; genomic RNA; STD; VRL; 15384 BP. XX AC AB000388; XX DT 17-FEB-1997 (Rel. 50, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 5) XX DE Mumps virus cDNA sequence of the genomic RNA, complete sequence, DE polymorphism. XX KW . XX OS Mumps rubulavirus OC Viruses; Riboviria; Negarnaviricota; Haploviricotina; Monjiviricetes; OC Mononegavirales; Paramyxoviridae; Rubulavirus. XX RN [1] RP 1-15384 RA Mori C.; RT ; RL Submitted (10-JAN-1997) to the INSDC. RL Chisato Mori, The Research Foundation for Microbial Diseases of Osaka Univ RL ., Kanonji Institute, Research and Development Division; 2-9-41, RL Yahata-cho, Kanonji city, Kagawa, 768, Japan (E-mail:biken-rd@niji.or.jp, RL Tel:0875-25-4171, Fax:0875-23-1660) XX RN [2] RA Mori C., Fujita J., Tooriyama T., Takahara R., Takamizawa A.; RT "Complete Nucleotide Sequence of the Mumps Virus Urabe Vaccine Strain RT Genomic cDNA"; RL Rinsho To Uirusu 23:341-352(1995). XX DR MD5; ef9d8cb51d19a1bb6228613efb351826. DR EuropePMC; PMC102035; 11024125. DR EuropePMC; PMC3410871; 22879820. XX FH Key Location/Qualifiers FH FT source 1..15384 FT /organism="Mumps rubulavirus" FT /strain="Urabe AM-9 (parental strain)" FT /mol_type="genomic RNA" FT /note="This sequence is complementary to the genomic FT sequence" FT /db_xref="taxon:1979165" FT variation 14 FT /replace="t" FT /note="within variation of the strain" XX SQ Sequence 15384 BP; 4730 A; 3411 C; 3143 G; 4100 T; 0 other; accaagggga aaaagaagat gggatgttgg tagaacaaat agtgtaagaa acagtaagcc 60 cggaagtggt gttttgcgat ttcgaggccg ggctcgatcc tcacctttca ttgtcgatag 120 gggacatttt gacactacct ggaaaatgtc gtctgtgctc aaagcatttg agcgattcac 180 gatagaacag gaacttcaag acaggggtga ggagggttca attccgccgg agactttaaa 240 gtcagcagtc aaagtcttcg ttattaacac acccaatccc accacacgct accagatgct 300 aaacttttgc ctaaggataa tctgcagtca aaatgctagg gcatctcaca gggtaggtgc 360 attgataaca ttattctcac ttccctcagc aggcatgcaa aatcatatta gattagcaga 420 tagatcacct gaagctcaga tagaacgctg tgagattgac ggttttgagc ctggcacata 480 taggctaatt ccgaatgcac gcgccaatct tactgccaat gaaattgctg cctatgcttt 540 gcttgcagac gacctccctc caaccataaa taatggaact ccctatgtac atgcagatgt 600 tgaaggacag ccatgtgatg agattgagca attcctagat cgatgctaca gtgtactaat 660 ccaggcttgg gtgatggtct gtaaatgtat gacagcgtac gaccaacctg ctggatctgc 720 tgatcggcgg tttgcaaaat accagcaaca aggtcgcctg gaagcaagat acatgctgca 780 gccggaggcc caaaggttga tccaaactgc catcaggaga agtcttgttg ttagacagta 840 ccttactttc gaactccagt tggcaagacg gcaggggttg ctatcaaaca gatactatgc 900 aatggtgggt gacattggaa agtacattga gaattcaggc cttactgcct tctttctcac 960 cctcaaatat gcactaggta ccaaatggag tcctctgtca ttggccgcat tcaccggtga 1020 actcactaag ctccgatccc tgatgatgtt atatcgagat ctcggagaac aagccagata 1080 ccttgctttg ttggaggctc cccaaataat ggactttgca cccggaggct acccattgat 1140 attcagttat gctatgggag tcggtacagt cctagatgtc caaatgcgaa attacactta 1200 tgcacgacct ttcctaaatg gttattattt ccagattggg gttgagactg cacgacggca 1260 acaaggcact gttgataaca gagtagcaga tgatctaggc ctgactcctg agcaaaggac 1320 tgaggttact caacttgttg acaggcttgc aaggggcaga ggtgcgggga taccaggtgg 1380 gcccgtgaat ccttttgttc ctccagttca acagcaacaa cctgctgccg catatgagga 1440 catccctgca ttggaggaat cagatgacga cggtgatgaa gatgggggtg caggattcca 1500 aaatggagca caagcaccag ctgcaagaca gggaggccaa aatgacctca gagtacagcc 1560 actacaggac ccaacccaag cacaactttt catgccatta tatcctcaag tcagcaacat 1620 cccaaatcat cagaatcatc agatcaatcg cgtcgggggg atggaacacc aagatttatt 1680 acgatacaac gagaatggtg atcctcaaca agatgcaagg ggcgaacacg gaaacaccct 1740 cccaaacaat cccaatcaaa acgcacagtc gcaagtgggc gactgggatg agtaaatcac 1800 tgacatgatc aaactacccc caattgcaac aaccccagga caatccagcc acagctaact 1860 gcccaaatcc actacattcc attcatactt agtctttaag aaaaaattag gcccggaaag 1920 aattagttct acgagcatcg acacaattat cttgatcgtg tttctttccg ggcaagccat 1980 ggaccaattt ataaaacaag atgagactgg tgatttaatt gagacaggaa tgaacgttgc 2040 aaatcatttc ctatccgccc ccattcaggg aaccaactcg ttgagcaagg ccacaatcat 2100 ccctggcgtt gcaccagtac tcattggcaa tccagagcaa aagaacattc agtaccccac 2160 cacatcacat caggggtcca agtcaaaggg cagaggctca ggggccaggc ccatcatagt 2220 ctcatcctcc gaaggaggca ctggagggac tcagattcct gagccccttt tcgcacaaac 2280 aggacaaggt ggcattgtca ccaccgttta tcaggatcca actatccaac caacaggttc 2340 atatcgaagt gtggaattgg ctaagatagg aaaagagaga atgattaatc gatttgttga 2400 aaaaccaaga acctcaacgc cggtaacaga atttaagagg ggggccggga gcggctgctc 2460 aaggccagac aatccaagag gagggcatag acgggaatgg agcctcagct gggtccaagg 2520 agaggtccgg gtctttgagt ggtgcaaccc catatgctca cctatcactg ccacagcaag 2580 attccactcc tgcaaatgtg ggaattgccc cgcaaagtgc gatcagtgcg aacgagatta 2640 tggacctcct tagagggatg gatgctcgcc tgcaacatct tgaacaaaag gtggacaagg 2700 tgcttgcaca gggcagcatg gtgacccaaa taaagaatga attatcaaca gtaaagacaa 2760 cactagctac aattgaagga atgatggcga cagtaaagat catggatcct ggaaacccga 2820 caggggtccc agttgatgag cttagaagaa gttttagtga tcatgtaaca attgttagtg 2880 gaccaggaga tgtgtcattc agctccggtg aagaacccac actgtatttg gatgaactag 2940 cgaggcctgt cccaaagccc cgtcctgcaa agcagccaaa accccaacca gtaaaggatt 3000 tagcaggacg gaaagtgatg ataactaaaa tgatcactga ctgtgtggcc aatcctcaaa 3060 tgaagcaggt gtttgagcaa cgattggcaa gagccagcac cgaggatgct ctgaatgata 3120 tcaagcgaga catcataagg agcgccatat gaactcacca ggaacaccag actcacggga 3180 aaatccacaa actgaaagcc acaatgattc cctgttaaat aaaaaataag cacgaacaca 3240 agtccaatcc aaccatagca gcaatggccg ggtcacagat caaaatccct cttccaaagc 3300 cccctgattc agactctcaa agactaaatg cattccctgt aatcgtggct caagaaggca 3360 aaggacgact cctcagacag atcagactta ggaaaatatt atcaggggat ccgtctgatc 3420 atcaaattac atttgtgaat acatatggat tcatccgtgc cactccagaa acatccgagt 3480 tcatctctga atcatcacaa cagaaggtga ctcctgtagt gacggcgtgc atgctgtcct 3540 tcggcgctgg accagtccta gaagacccac aacatatgct gaaagctctt gatcagacag 3600 acatcagggt tcggaagaca gcgagtgata aagagcagat cttattcgag atcaaccgca 3660 tccccaatct attcaggcat catcaaatat ctgcggacca tctgattcaa gccagctccg 3720 ataaatatgt caagtcacca gcaaagttga ttgcaggagt aaattacatc tactgtgtca 3780 catttttatc tgtgacagtt tgttctgcct cactcaagtt tcgagttgcg cgcccattgc 3840 ttgctgcacg atctagatta gtaagagcag ttcagatgga agttttgctt cgagtaactt 3900 gcaaaaagga ttcccaaatg gcaaagagca tgttaaatga ccctgatgga gaagggtgca 3960 ttgcatccgt gtggttccac ctgtgtaatc tgtgcaaagg caggaataaa cttagaagtt 4020 acgatgaaaa ttattttgca tctaagtgcc gtaagatgaa tctgacagtc agcataggag 4080 acatgtgggg accaaccatt ctagtccatg caggcggtca cattccgaca actgcaaaac 4140 cttttttcaa ctcaagaggc tgggtctgcc accccatcca ccaatcatca ccatcgttgg 4200 cgaagaccct atggtcatct gggtgtgaaa tcaaggctgc cagtgctatc ctccagggct 4260 cagactatgc atcacttgca aaaactgatg acataatata ttcaaagata aaagtcgata 4320 aagatgcggc caactacaaa ggagtatcct ggagtccatt caggaagtct gcctcaatga 4380 gcaacctatg agaatttcat ctattccccc tgatgcctcc aggagaatca acaatcagtc 4440 cgattttacc ggtggtaact tgattgaaat tatagaaaaa ataagcctag aaggacatct 4500 tacttctcga ctttccaact ttgaaaatag aattgatcag taatcatgaa ggctttttta 4560 gttacttgct taagctttgc agtcttttca tcttctgtat gtgtgaatat caacatcttg 4620 cagcaaattg gatatatcaa gcaacaagtc aggcaactaa gctattactc acaaagttca 4680 agctcctaca tagtggtcaa gcttttaccg aatatccaac ccattgataa cagctgtgaa 4740 tttaagagtg taactcaata caataagacc ttgagtaatt tgcttcttcc aattgcagaa 4800 aacataaaca atattgcatc gccctcatct gggtcaagac ggcataaaag gtttgctggt 4860 attgctattg gcattgctgc gctcggtgtt gcgaccgcag cacaagtaac tgccgctgtc 4920 tcattagttc aagcacagac aaatgcacgt gcaatagcgg cgatgaaaaa ttcaatacaa 4980 gcaactaatc gagcagtctt cgaagtgaag gaaggcactc aacagttagc tatagcggta 5040 caagcaatac aagaccacat caatactatt atgaacaccc aattgaacaa tatgtcttgt 5100 cagatccttg ataaccagct tgcaactttc ctaggattat acctaacaga attaacaaca 5160 gtgtttcagc cacaattaat taatccggca ttgtcaccga ttagtataca agccttgagg 5220 tctttgcttg gaagtatgac gcctgcagtg gtccaagcaa cattatctac ttcaatctct 5280 actgctgaaa tactaagtgc cggtctaatg gagggtcaga ttgtttctgt tctgctagat 5340 gagatgcaga tgatagttaa gataaatatt ccaactattg tcacacaatc aaatgcattg 5400 gtgattgact tctactcaat ttcgagcttt attaataatc aggaatccat aatccaattg 5460 ccagacagaa tcttggagat cgggaatgaa caatggagct atccagctaa aaattgtaag 5520 ttgacaagac accacatatt ctgccaatac aatgaggcag agaggctgag cctagaatca 5580 aaactatgcc ttgcaggcaa tataagtgcc tgtgtgttct cacccatagc agggagttat 5640 atgaggcgat ttgcggcact ggatggaaca attgttgcaa actgtcgaag tctaacgtgt 5700 ctatgcaaga atccatctta tcctatatac caacctgacc atcatgcagt cacgaccatt 5760 gatctaaccg catgtcaaac attgtcccta gacggattgg atttcagcat tgtctctcta 5820 agcaacatca cttacgctga gaaccttacc atttcattgt ctcagacaat caatactcaa 5880 cccattgaca tatcaactga actgagtaag gttaatgcat ccctccaaaa tgccgttaag 5940 tacataaagg agagcaacca tcagctccaa tctgtgagtg taaactccaa aatcggagct 6000 ataattgtag cagccttagt tttgagcatt ctgtcaatta tcatttcgct attgttttgc 6060 tgctgggctt acattgcaac taaagaaatc agaagaatca acttcaaaac aaatcatatc 6120 aatacaatat caagtagtgt cgatgatctc attaggtact aatcctaaca ttgtgattca 6180 tcctgcattg agaaaagatt tagaaaaaaa ctaaattaag aatgaatctc ctggggtcgt 6240 aacgtctcgt gaccctgccg ttgcactatg ccggcgatcc aacctccctt atacccaaca 6300 tttctattgc taattcttct ctctctgatc gtaactttgt atgtctggat tatatcaacc 6360 atcacttaca agactgtggt gcgacatgca gcactgtacc agagatcctt ctttcgctgg 6420 agttttgatc actcactcta gaaagatctc cagctgggac aagtcccaat ccatcatgcg 6480 agaacaagct gcatccaaat gatgccgttc aatcatgaga cataaagaaa aaatcaagcc 6540 agaacaagct taggatcaca atacaacaca gaaccccagc tgccatcata actgttctct 6600 ggccgctcga aagatggagc cctcaaaact cttcacaatg tcagacaatg ccacctttgc 6660 acctggacct tttatcaatg cggcagacaa gaagacgttc cgaacctgct tccgaatatt 6720 ggtactgtct gtacaagctg ttacccttat attagttatt gtcactttag gtgagcttgt 6780 gaggatgatc aatgatcaag gcttgagcaa tcagttgtct tcaattgcag acaagataag 6840 agagtcagct actatgattg catctgctgt gggagtaatg aatcaagtta ttcacggagt 6900 aacggtatcc ttacccctac aaattgaggg aaaccaaaat caattgttat ccacacttgc 6960 cacaatctgt acaggcaaaa aacaagtctc aaactgctct acaaacatcc ccttagttaa 7020 tgaccttagg tttataaatg ggatcaataa attcatcatt gaagattatg caactcatga 7080 tttctctatc ggccatccac tcaacatgcc tagctttatc ccaactgcaa cttcacccaa 7140 tggttgcaca agaattccat ccttttctct aggtaagaca cactggtgct acacacataa 7200 tgtaattaat gccaactgca aggatcatac ttcgtctaac caatatattt ccatggggat 7260 actcgttcag accgcgtcag ggtatcctat gttcaaaacc ttaaaaatcc aatatctcag 7320 tgatggcctt aatcggaaaa gctgctcaat tgcaacagtc cctgatggat gcgcaatgta 7380 ctgttacgtc tcaactcaac ttgaaaccga cgactatgcg gggtccagcc cacctaccca 7440 gaaacttacc ctgttattct ataatgatac cgtcacagaa aggacaatat ctccaactgg 7500 tcttgaaggg aattgggcta ctttggttcc aggagtgggg agtggaatat atttcgagaa 7560 taaattgatt tttcctgcat atgggggtgt cttgcccaat agtacactcg gagttaaatc 7620 agcaagagaa tttttccggc ctgttaatcc atataatcca tgttcaggac cacaacaaga 7680 tttagatcag cgtgctttga gatcatactt cccaagttac ttctctaatc gaagagtaca 7740 gagtgcattt cttgtctgtg cctggaatca gatcctagtt acaaattgcg agctagttgt 7800 cccctcaaac aatcagacac tgatgggtgc agaaggaaga gttttattga tcaataatcg 7860 actattatat tatcagagaa gtaccagctg gtggccgtat gaactcctct atgagatatc 7920 attcacattt acaaactctg gtcaatcatc tgtgaatatg tcctggatac ctatatattc 7980 attcactcgt cctggttcag gcaactgcag tggtgaaaat gtgtgcccaa ctgcttgtgt 8040 gtcaggggtt tatcttgatc cctggccatt aactccatat agccaccaat caggcattaa 8100 ccgaaatttc tatttcacag gcgcactatt aaattcaagc acaactagag taaatcctac 8160 cctttatgtc tctgccctta ataatcttaa agtactagcc ccatatggta atcagggact 8220 gtttgcctcg tacaccacaa ccacctgctt tcaagatacc ggtgatgcta gtgtgtattg 8280 tgtttatatt atggaactag catcgaatat cgttggagaa ttccaaattc tacctgtgct 8340 aaccagattg accatcactt gagtcatagt gaatgcagtg ggaggcccta tgggcgtgct 8400 tcaattttta tcgattatta agaaaaaaca ggccagaatg gcgggcctaa atgagatact 8460 cttacctgaa gtacatttaa actcacccat cgttagatat aagcttttct actatatatt 8520 gcatggccag ttaccaaatg atttggagcc agatgacttg ggcccactag caaatcagaa 8580 ttggaaggca attcgagctg aagaatctca ggttcatgca cgtttaaaac agatcagagt 8640 agaactcatt gcaaggattc ctagtctccg gtggacccgc tctcagaggg agattgccat 8700 actcatttgg ccaagaatac ttccaatcct gcaagcatat gatcttcggc aaagtatgca 8760 attgcccaca gtatgggaga aattgactca atccacagtt aatcttataa gtgatgggct 8820 agaacgggtt gtattacaca tcagcaatca gctgacaggc aagcctaact tgtttaccag 8880 atctcgagca ggacaagacg caaaggatta ctcaattcca tccactagag agctatctca 8940 aatatggttt aacaacgagt ggagtggatc tgtaaagacc tggcttatga ttaaatatag 9000 aatgaggcag ctaatcacaa accaaaagac aggtgagtta acagatttag taaccattgt 9060 ggatactagg tccactctat gcattattgc cccagaatta gttgctttat actccaatga 9120 gcacaaagca ttaacgtacc tcacctttga aatggtatta atggtcactg atatgttaga 9180 gggacgactt aatgtttctt ctttatgcac agctagtcat tatctgtccc ctctaaagaa 9240 gagaatcgaa attctcctaa cattagttga tgaccttgct ctacttatgg gggacaaagt 9300 atacggtgtt gtctcttcac ttgagagttt tgtttacgcc caattacagt atggtgatcc 9360 tgttgtagac attaagggta cattctacgg atttatatgt aatgagattc tcgacctact 9420 gactgaagac aacatcttta ctgaagagga ggcaaacaag gttcttctgg acttgacatc 9480 acagtttgac aatctatccc ctgatttaac tgctgagctc ctctgcatta tgagactttg 9540 gggccatccc acattaactg ccagccaagc agcatccaag gtccgagagt ccatgtgtgc 9600 tcctaaggtg ttagatttcc aaacaataat gaagaccctg gctttctttc acgcaatcct 9660 gattaacggt tataggagga gccataatgg aatctggcct cctactactc ttcatggcaa 9720 tgcccccaaa agcctcattg agatgcggca tgataattca gagcttaagt atgagtatgt 9780 cctcaagaat tggaaaagta tatctatgtt aagaatacac aaatgctttg atgcatcacc 9840 tgatgaagat ctcagcatat tcatgaaaga taaggcaatc agctgtccaa agcaagactg 9900 gatgggagta tttaggagga gcctgataaa acagcgatat cgtgatgcga atcggcctct 9960 accacaacca ttcaaccgac ggctactgtt gaattttcta gaggatgaca gattcgatcc 10020 cattaaggag cttgagtatg tcaccagtgg agaatatctt agggaccctg aattttgtgc 10080 atcttactct ctcaaggaga aggagataaa ggctacaggt cgcatatttg ccaaaatgac 10140 aaagagaatg aggtcgtgcc aagtaattgc agaatcattg ttggccaatc atgcaggtaa 10200 attaatgaga gagaatggag ttgtcttaga ccagttaaaa ttgacaaaat ctttgttaac 10260 gatgaaccaa attggtatta tatcagagca cagccgaaga tccactgctg acaacatgac 10320 tttggcacac tccggttcaa ataagcacag aattaataat agtcaattca agaagaataa 10380 agacagtaag catgagatgc ctgatgatgg gtttgagata gcagcctgct ttctaacaac 10440 tgacctcaca aaatactgct taaattggag gtaccaagtc atcatcccct ttgcgcgtac 10500 attgaattca atgtatggta taccccacct gtttgaatgg atacatttaa ggctaatgcg 10560 aagcactctc tatgttggtg atcccttcaa tcctccatca gatcctaccc aacttgacct 10620 tgatacagct ctcaatgatg atatatttat agtttctcct cgtggaggaa tcgagggttt 10680 atgtcaaaaa ttatggacta tgatttccat ctcgacaatc atattatccg caactgaggc 10740 aaacactaga gttatgagca tggttcaggg tgacaaccaa gcaattgcaa tcaccactag 10800 agtagtacgc tcgctcagtc attccgagaa gaaggagcaa gcttataaag caagtaaatt 10860 attctttgaa aggcttaaag ctaacaacca tggaattgga caccacttaa aagaacaaga 10920 aacaatcctt agttctgatt tcttcatata cagtaagagg gtgttttaca aaggtcgaat 10980 tttgactcaa gcgttaaaga acgtgagcaa gatgtgctta acagctgaca tactagggga 11040 ctgttcacaa gcatcatgct ccaatttagc tactactgta atgcgcctga ctgagaatgg 11100 ggtcgagaaa gatttgtgtt attttctaaa tgcattcatg acaatcagac aattatgtta 11160 tgatctggta ttcccccaaa ctaaatctct tagtcaggac atcactaatg cttatcttaa 11220 tcatccaata cttatctcaa gattgtgtct attaccatct caattagggg gcctaaactt 11280 tctctcgtgt agtcgcctgt tcaatagaaa cataggagac ccattagtgt ctgcaattgc 11340 tgatgtgaaa cgattaatta aagctggctg tctagatatc tgggtcctgt ataacatcct 11400 tgggaggagg cctggaaaag gtaagtggag cactctggca gctgatcctt atactttaaa 11460 catagattat ttagttcctt caacaacttt tttaaagaag catgcccaat atacattgat 11520 ggaacggagt gttaatccca tgctccgtgg agtattcagc gaaaatgcag ctgaggaaga 11580 agaggaactc gcacagtatc tattagatcg tgaggtagtc atgcccagag ttgcacatgt 11640 aatacttgcc cagtctagtt gcggcagaag aaaacagatt caaggttact tggattccac 11700 tagaactatt atcaggtatt cactggaggt gagaccattg tcagcaaaga agctgaatac 11760 agtaatagaa tataacttat tgtatctttc ctacaatttg gagattattg aaaaacccaa 11820 tatagtccaa ccttttttga atgcaatcaa tgttgatact tgtagcatcg atatagctag 11880 gtcccttaga aaactatcct gggcaacttt actgaacgga cgtcccatcg agggattaga 11940 aacacctgat cccattgaat tggtacatgg gtgtttgatc attgggtcag atgaatgtga 12000 gcattgcagc agtggtgatg acaagttcac ctggtttttc ctacccaagg ggataaggct 12060 agataatgat ccggcgtcca acccacccat cagagtacct tatattggat ctaaaacaga 12120 tgaacggagg gttgcgtcaa tggcttacat caaaggagca tctgtatcac ttaaatcagc 12180 actcagacta gcgggagtat atatttgggc tttcggagat acagaggaat catggcagga 12240 tgcctatgag ttagcttcca ctcgtgttaa tctcacacta gagcaattgc aatctctcac 12300 tcctttacca acatctgcta acctagtcca cagattggat gatggcacta ctcaattaaa 12360 atttacccct gcaagctcct atgcattctc tagcttcgtt catatatcta atgactgtca 12420 agttcttgag atcgatgatc aggtaacaga ttctaacctg atttaccagc aagttatgat 12480 tactggcctt gctttaattg agacatggaa caatcctcca atcaacttct ccgtttatga 12540 aactacacta cacttgcaca caggctcatc ttgctgtata agacctgtcg agtcttgtgt 12600 agtaaatcct cctttgcttc ctgtcccctt cattaatgtc cctcaaatga ataaatttgt 12660 atatgaccct gaaccgctca gtttgctaga gatggaaaaa attgaggaca ttgcttatca 12720 aaccagaatt ggtggtttag atcaaatccc acttctggaa aaaataccct tactagctca 12780 cctcaccgcc aagcagatgg taaatagcat caccgggctt gatgaagcaa catctatagt 12840 aaatgacgct gtggttcaag cagactatac tagcaattgg attagtgaat gctgttacac 12900 ttacattgat tctgtgtttg tttactctgg ctgggcatta ttattggaac tttcgtacca 12960 aatgtactac ttaagaattc aaggcatcca aggaattcta gactatgtgt atatgacctt 13020 gaggaggata ccaggaatgg ctataacggg catctcatcc acaattagtc accctcgtat 13080 actcagaaga tgcatcaatc tggatgtcat agcccctatc aattctccac acatagcttc 13140 actggattac acaaaattga gcatagacgc agtaatgtgg ggaactaagc aggttttgac 13200 caacatttcg caaggtatcg attatgagat agttgttcct tctgaaagcc aactcacact 13260 cagtgataga gttctaaatc tagttgctcg aaaactatca ctactggcaa tcatctgggc 13320 caattataac tatcctccaa aggttaaagg tatgtcacct gaggacaaat gtcaggcttt 13380 aactacccat ctactccaaa ctgtcgaata tgttgagcac attcagattg aaaagacgaa 13440 catcaggagg atgattattg aaccaaaatt aactgcctac cctagtaatt tgttttatct 13500 atctcgaaag ctgcttaatg caattcgaga ttctgaagaa ggacaatttc tgattgcatc 13560 ctattataac agctttggat atctggaacc aatactaatg gaatctaaaa tattcaatct 13620 aagttcatcc gaatcagcat cccttacaga atttgatttc atcctcaact tggaattgtc 13680 tgaagccagc cttgagaaat actctctccc aagtttgctt atgacggctg agaatatgga 13740 taacccattt cctcaacccc ccctccatca tgttctcaga ccactaggtt tatcatccac 13800 atcatggtat aaaacaatca gtgttttgaa ttatattagc catatgaaga tatctgacgg 13860 tgcccatcta tatttggcag agggaagtgg agcctctatg tcacttatag agactttctt 13920 gcccggtgaa gtaatatggt acaacagcct attcaatagt ggtgagaatc ctccccaacg 13980 caattttgcc cctttaccca cccagtttat tgaaagtgtc ccttacagat tgattcaagc 14040 aggtatagca gcaggaagtg gtgtagttca aagtttctat ccactctgga acggtaatag 14100 cgatatcact gacttaagca cgaaaactag tgtcgagtac attattcaca aggtaggggc 14160 tgatacatgt gcattggttc atgtggatct ggagggtgta cccggctcaa tgaacagtat 14220 gttggagaga gcccaagttc atgcgctact gatcacggta actgtactaa agccaggtgg 14280 cttactaatc ttgaaagctt catgggaacc ttttaatcga ttttcctttt tactcacaat 14340 actctggcaa ttcttttcaa caataaggat ccttcgatct tcatactccg acccgaataa 14400 tcacgaggta tacataatag ctacattagc tgttgatccc accacatcct cctttacaac 14460 cgctctgaat agggcgcgta ctctgaatga acagggcttt tcactcatcc cacctgaatt 14520 agtgagtgag tactggagga ggcgtgttga acaagggcag attatacagg attgtataga 14580 taaagtcata tcagagtgtg ttagagacca atatctggca gacaacaata ttatccttca 14640 ggcggggggg actccaagca caagaaaatg gttggatctg cctgactatc cgtcgttcaa 14700 tgaattacaa tcggagatgg ccagactcat aacaattcat cttaaagagg taatagaaat 14760 cctaaagggc caatcatcag atcatgacac cctattattt acttcataca atgtaggtcc 14820 cctcgggaaa ataaatacaa tactcagatt gattgttgag agaattctta tgtacactgt 14880 aaggaactgg tgcatcttgc ccactcaaac tcgtctcacc ttacgacagt ctatcgagct 14940 tggagagttt agactaagag acgtgataac acccatggag atcctaaagc tatcccccaa 15000 ccggaagtat ctgaagtctg cattaaacca atcaacattc aatcatctaa tgggagaaac 15060 atctgacatg ttgttaaatc gatcctatca aaaaagaatt tggaaagcca ttgggtgtgt 15120 aatctattgc tttggtttgc ttacccctga tgttgaagat tctgagcgca ttgatattga 15180 caatgatata cctgattatg atatccacgg ggacataatt taaatcgact aaagactcct 15240 ctggcatgat acgtcaccaa aaggttccac accagcatcc aaattcttct agaccgtaca 15300 cgacctcgaa caatcataac cacatcagta ttaaatccat aatatcattt taagaaaaaa 15360 ttgattttac tttctcccct tggt 15384 // ID AB000403; SV 1; linear; genomic RNA; STD; VRL; 2704 BP. XX AC AB000403; XX DT 02-OCT-1997 (Rel. 52, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 4) XX DE Rice grassy stunt virus genomic RNA5 for nucleocapsid protein and 21.6K DE protein, complete cds. XX KW . XX OS Rice grassy stunt tenuivirus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-2704 RA Takahashi M.; RT ; RL Submitted (10-JAN-1997) to the INSDC. RL Mami Takahashi, National Institute of Agro-Environmental Sciences, Division RL of Microbiology; 3 Kannondai, Tsukuba, Ibaraki 305, Japan RL (Tel:0298-38-8301, Fax:0298-38-8199) XX RN [2] RX PUBMED; 9292026. RA Toriyama S., Kimishima T., Takahashi M.; RT "The proteins encoded by rice grassy stunt virus RNA5 and RNA6 are only RT distantly related to the corresponding proteins of other members of the RT genus Tenuivirus"; RL J. Gen. Virol. 78:2355-2363(1997). XX DR MD5; 0c92525f7b8cc1592db4e29c4aac154c. XX FH Key Location/Qualifiers FH FT source 1..2704 FT /organism="Rice grassy stunt tenuivirus" FT /segment="5" FT /lab_host="Oryza sativa" FT /mol_type="genomic RNA" FT /db_xref="taxon:66266" FT CDS 104..679 FT /product="21.6K protein" FT /db_xref="UniProtKB/TrEMBL:O36169" FT /protein_id="BAA22531.1" FT /translation="MSGMNSEEYMVLNTMLQTVGCDAHELLKKTPGCEKAVYLFCCKST FT MIRELVTVIRSIDENTINGQLLYSVCRELLKLMYLEDGSENIAIIKPLLLLLTEKNKIV FT NKVSTKNCWICSLYKRELAEGSPLVVTKSKTEVKHFADSVNVGFVTVQHGSELPDLPMT FT IYKPVKEQKHQYGFLSDSELITADYVRV" FT CDS complement(1558..2535) FT /product="nucleocapsid protein" FT /db_xref="GOA:O36170" FT /db_xref="InterPro:IPR009522" FT /db_xref="UniProtKB/TrEMBL:O36170" FT /protein_id="BAA22532.1" FT /translation="MGKVQFGDGHWANNKEWSELLSEIFSKIRASIDGFANATADLAAG FT LEYQAFNPEKILRKLIASSTSLDDFVKDMRDLLVARYTRGTSFLFNAKNSIEKAKDKKK FT AEAIQVLINRYGVKKNAGDNAVDQATLGRISQVLAYMALRVALQITDYHKPIIPLRPIS FT TVDIKNAIIDVVPQFLYLKADQLDSKTNSEAALYVIHLCYQVCVSERIMTKAQKDKHSV FT HTKSAMITHCMGFVNLAMDNSSVVSDDKIAGRRMISGPWGLQETALDATGCACIIDVVD FT FCCRGHKVTDAVAPVRLFRLAIECIKDTADLKDAGVKLKTLVDK" XX SQ Sequence 2704 BP; 887 A; 516 C; 430 G; 871 T; 0 other; acacaaagtc ctgggcaatt atagcaaaac aacaccttct ttaagtactc agctttcctt 60 taaaccacat tacttcagaa ttctctagca cattgatcgt tatatgtctg gcatgaattc 120 agaagagtac atggtgctca acaccatgct tcaaacagta gggtgtgatg cacacgaact 180 actgaaaaaa actccaggtt gtgagaaggc tgtgtattta ttctgttgta agtctactat 240 gatacgtgaa ttagtgactg tgatcaggag tattgatgaa aacaccatca acggtcaatt 300 gctatattct gtttgcagag agctgctaaa actaatgtat ctggaagatg gctctgagaa 360 catagcaata atcaaaccat tgctactgtt actcactgag aaaaataaga tagtgaacaa 420 ggtctccaca aagaactgct ggatctgtag cttatacaaa agagagttgg cggaagggtc 480 ccctctagtt gttactaaga gtaagactga agtgaaacac ttcgcggact cagtgaatgt 540 tggttttgtc actgttcaac atggttcaga gttaccagac ttgcctatga caatatataa 600 gccagttaaa gaacagaagc accaatatgg gtttctgtct gactctgagc taatcactgc 660 agattacgtt agagtctagt gattggacta aaattgagtg tattagtaaa gtattatatt 720 ttcttgtctt tgaactctca gtcaaaagag tttgagacta atgaacttca taatacactt 780 gatgtggatg aaaaaaacac aaaaaaacaa aaaaagaaaa aaagaagaaa aaaagaaaaa 840 aaccaaaaaa atagaaacaa ataaagaaac aataacatag gtaagtagta aataagcaac 900 accagcttcg gctggtatcc atcaatcaat gattttggag acaaatcagt gatcatgact 960 tcaaaattgt ccagattaac atttaaggtt tctgttcttc tgtcttccca actaatgttc 1020 attaatgagt ttgaagttgt agatttactt acattttctg atttgaatga gaatttgtac 1080 tgggataaca gccgaagctg tttttgtttt tttgattttt ttgtttttct gtgttttttt 1140 ggtgttttta tgttttccat attttgtgat ttttttgctt ttattattat taacatctag 1200 acacttttag cttcgttacc caccctatga tgattataat atattaagac ttactcctac 1260 tttaagtgac cataattgta catacatatt aactaacacc atactacaaa tgcatataag 1320 aacatattaa ctactcacac taatgacctt acaatggact actacaacta agtacagtat 1380 ataatgagta tataatccta taacctccat taatgctaga ttactattac tatttattat 1440 tatttgttta taacataaac ctaacaccca actcccattg ctatgtaatt tactaattta 1500 tattatatta tatgattcac actatacact acgctaaagg ctaatgtaga aaatgaatca 1560 cttatcaacc agagtcttca atttaactcc agcatccttc agatcagctg tatcttttat 1620 gcactcaata gctaatctga acagcctaac tggcgccaca gcatctgtta ctttgtgtcc 1680 cctgcagcag aaatcaacaa catcaatgat acatgcgcac cctgtggcat ctagagcagt 1740 ttcctgtagt ccccatggac ctgagatcat ccttctacca gctatcttat catcagacac 1800 tactgaagaa ttatccatag ccaggttgac aaaacccatg cagtgtgtta tcattgctga 1860 cttagtgtgg acactgtgct tatccttctg agctttagtc atgattcttt cagacacaca 1920 gacttggtaa cacaaatgga ttacatacag agctgcctct gagttggtct ttgaatcaag 1980 ttgatctgct ttaagatata aaaattgtgg aacaacatca atgatagcat tcttaatatc 2040 aacggtacta atgggtctca atggtatgat tggcttatga tagtctgtga tttgtaaagc 2100 aactctcaat gccatatatg ccaacacttg acttatcctt cccaaagtgg cttgatcaac 2160 agcattgtct ccagcattct tttttactcc gtacctattt attagtacct gaatagcttc 2220 tgccttcttc ttatccttag ctttctcaat tgagttttta gcattgaaca agaagctagt 2280 tcctctggtg tacctggcca ccaagaggtc acgcatatcc ttaacaaagt catccaatga 2340 agttgaggat gcaatcaact tcctcaaaat cttttcagga ttgaaagcct gatactccaa 2400 tcctgcagcc aaatcagctg tagcattggc aaatccatct atagatgctc tgatttttga 2460 aaatatttct gacaacaact cagaccattc cttgttattt gcccagtgac catctccaaa 2520 ttgcacttta cccatcttac actattattt ttactaaaac aaaactgatt tgttatatta 2580 tataatagga atatataaaa aaccaatata ttagataata ataaaatact taaagtacac 2640 aaaaagggtt ttcttaatgt atgatgaatg ttaactttct tcaaaagatg cccagacttt 2700 gtgt 2704 // ID AB000404; SV 1; linear; genomic RNA; STD; VRL; 2584 BP. XX AC AB000404; XX DT 02-OCT-1997 (Rel. 52, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 4) XX DE Rice grassy stunt virus genomic RNA6 for 20.6K major nonstructural protein DE and 36.4K protein, complete cds. XX KW . XX OS Rice grassy stunt tenuivirus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-2584 RA Takahashi M.; RT ; RL Submitted (10-JAN-1997) to the INSDC. RL Mami Takahashi, National Institute of Agro-Environmental Sciences, Division RL of Microbiology; 3 Kannondai, Tsukuba, Ibaraki 305, Japan RL (Tel:0298-38-8301, Fax:0298-38-8199) XX RN [2] RX PUBMED; 9292026. RA Toriyama S., Kimishima T., Takahashi M.; RT "The proteins encoded by rice grassy stunt virus RNA5 and RNA6 are only RT distantly related to the corresponding proteins of other members of the RT genus Tenuivirus"; RL J. Gen. Virol. 78:2355-2363(1997). XX DR MD5; 36bebe1e3b95dce8636e161c3edaf5e7. XX FH Key Location/Qualifiers FH FT source 1..2584 FT /organism="Rice grassy stunt tenuivirus" FT /segment="6" FT /lab_host="Oryza sativa" FT /mol_type="genomic RNA" FT /db_xref="taxon:66266" FT CDS 75..614 FT /product="20.6K nonstructural protein" FT /db_xref="InterPro:IPR006960" FT /db_xref="UniProtKB/TrEMBL:O36171" FT /protein_id="BAA22533.1" FT /translation="MSKSHSDVVGTVSGLNYRLFYDMIPDRISQKLRLREITDPKTCNA FT SKIPLVLKAAEEVSRMDIDHDKDGYTKVQVKMPEYMKAYLEEMLSASNSTTTGISYSVF FT LVYMQDKCGDWITEHYLKNVHSMSKQQLHELITGIIETFSSDDIEDEHYDDLICKIPAY FT VYNIVLRYIDMSGLTT" FT CDS complement(1528..2505) FT /product="36.4K protein" FT /db_xref="GOA:O36172" FT /db_xref="InterPro:IPR004980" FT /db_xref="UniProtKB/TrEMBL:O36172" FT /protein_id="BAA22534.1" FT /translation="MALLQKLGSSKVSSKRMSPAMIPLDSINQDLVDPQQEKDAKNKKE FT GKKKDLDVSMDPLTGKLPLGKKKQVDTGGIAYLENALMQLDLHDFSFDSIRPRTKTFHM FT KRQHFKISTVNSRFRLDVEKTGLFSKTLKYSRICTLCLAFLGIKNRAQGTISFTFRDLS FT YLSENDQIDFKVKNRISKSFSAIASFPAPIFNDDLGNLICDFEIENASVNGVVIGDLLV FT LLGIEQSDLPVCYEPQKAKIFEYKPLTEKGLNKISNFAGYVDNVLKAAINHREGEDDGF FT STEGLGVLVHPRVKQIDNSIPIKSLENKPQKMLMRDGSYLDVNP" XX SQ Sequence 2584 BP; 837 A; 452 C; 445 G; 850 T; 0 other; acacaaagtc ctgggcaatt acaaacaaga aaaacttaat taaatactaa ggtttacttt 60 ttcttcaaat aggtatgtct aaatctcatt ctgacgttgt gggcactgtg tctggtctta 120 attatagact attttatgat atgattcctg ataggatatc tcagaaactc agattaagag 180 agataactga tccaaagaca tgcaacgcaa gcaagatacc cttagtgctc aaagctgctg 240 aggaagtgtc taggatggat atagaccatg ataaggatgg ctacacaaag gtccaggtca 300 aaatgcctga gtacatgaaa gcttacctgg aagagatgct cagtgcaagc aactcaacta 360 ccactggtat ctcctatagt gtgttcttag tgtacatgca agacaagtgt ggtgactgga 420 taacagaaca ttacctaaag aatgttcact ctatgtcaaa gcaacaattg catgaactga 480 ttactggaat aattgaaacc ttcagttcag atgacatcga ggatgagcac tatgatgatt 540 taatatgcaa aattcctgct tatgtatata atattgtcct tagatacata gatatgagtg 600 gcttaacaac atgaaactca ttactcacca ttgcaagagg ctatagagag atatataatg 660 ttggcaataa caaacattat ataataagat aatgaattga aaaaatgaaa atgaaacaaa 720 acaaagtcta gcttgtatag atcataaaat atgaacttat aattaataat caatgagaca 780 acaataatta gaaccaatag aaacgttgtc aataaaacta acatatagaa aatgaaggaa 840 agaaaataat taaaaaccgg aaaagagaaa agtgttgggg aaagaggagg taagaatggt 900 gagaaataag aaaaagggaa aaaagatgaa agggagtata cacaagtaat aaataaatgt 960 ataataagtt ccagataatg ctatatgaat aatttgagag gatatcatga aaacaaacta 1020 gtgaactaag aacaaaaaaa cagaaaagaa agaaaactaa aaaaatacta ctagcttcgg 1080 ctagtatccc attccatttc atcatatctt ggttcattcc ctactaggtg cataacgatc 1140 aattgggctt ctacattgtc agagggttct ctaatttcct actctggaga tctacttatt 1200 taaattaaaa ttaaattatg ttggatgctg gccgaagcca gtgagagtta cagcatgaca 1260 agggaaacaa acaacatata tcttgacaac tactaactat atttagttat ttgaattaac 1320 acaacattta ctcaatacca gttattccca tttttttgta ttttttgcaa ttatctcttt 1380 tccttgtttt tttgtttttt tgttttatct attattctac tttttttgtt ttttatatat 1440 tttttctctt tttttgtttt ttttgtctgt tttttttgtc ctgattccta ctctcctctt 1500 cccttagctt atttgttctt gtcccactta ggggttaaca tctagatatg agccatctct 1560 catcaacatc ttctgaggtt tgttctccag actttttata ggaatggaat tatcaatttg 1620 tttcacccta gggtgaacaa ggactcctaa accctctgtg ctgaacccgt catcttctcc 1680 ttcccgatgg tttatagcag ccttgaggac attatctaca tacccagcaa agttcgatat 1740 cttatttaat cctttctcag tgagtggttt atactcaaag atttttgctt tctgtggctc 1800 atagcagact ggcaggtcag attgttctat gccaagaaga accaatagat ctcctatcac 1860 cactccatta acagatgcat tctcaatctc aaagtcacag attagatttc ctaaatcatc 1920 attaaatatt ggtgctggaa atgatgctat tgcagaaaaa ctcttgctga ttctgttttt 1980 gaccttaaag tctatttgat cattctcgga caggtaagac aagtctctaa aagtaaaaga 2040 aattgttcct tgagctctat ttttgatccc tagaaaagcc agacacaatg tgcagattct 2100 actgtatttg agagtcttag aaaagagacc tgtcttctcc acgtcaagtc tgaatctgct 2160 attgacagtg cttattttga aatgctgtct tttcatgtgg aaggtttttg ttcttggcct 2220 aatgctatca aagctgaagt catgtaggtc cagttgcatt aaagcatttt ctaggtaagc 2280 aattcctcca gtgtctacct gtttcttttt ccccaggggt agcttaccgg ttaaaggatc 2340 catggaaaca tctagatcct tctttttacc ctccttctta ttctttgcat ctttttcctg 2400 ttgtgggtcc acaaggtctt gattaattga atcaagaggt atcatagcgg gtgacattct 2460 cttggaactc accttacttg aacctagctt ttggagtaaa gccatttttt tacagaatgt 2520 gaaaaaagat ttcctttatc aatatgtaag tttttcgctt ttcaaagatg cccagacttt 2580 gtgt 2584 // ID AB000472; SV 1; linear; genomic RNA; STD; VRL; 1198 BP. XX AC AB000472; XX DT 13-FEB-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 4) XX DE Onion yellow dwarf virus gene for coat protein, partial cds. XX KW . XX OS Onion yellow dwarf virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-1198 RA Sumi S.; RT ; RL Submitted (13-JAN-1997) to the INSDC. RL Shin-ichiro Sumi, Wakunaga Pharmaceutical Co., Ltd., Institute for RL Biotechnology Research; 1624 Shimokotachi, Koda-Cho, Takata-Gun, Hiroshima RL 739-11, Japan (E-mail:sumi_s@wakunaga.co.jp, Tel:+81-826-45-2331, RL Fax:+81-826-45-4351) XX RN [2] RX DOI; 10.1023/A:1007975401845. RX PUBMED; 9354273. RA Tsuneyoshi T., Ikeda Y., Sumi S.; RT "Nucleotide sequences of the 3' terminal region of onion yellow dwarf virus RT isolates from Allium plants in Japan"; RL Virus Genes 15(1):73-77(1997). XX DR MD5; 8c2f5133759ae3f3ed316ef76f6e8f2a. XX FH Key Location/Qualifiers FH FT source 1..1198 FT /organism="Onion yellow dwarf virus" FT /isolate="wakenegi" FT /mol_type="genomic RNA" FT /clone="F-1" FT /db_xref="taxon:43130" FT CDS <227..1003 FT /codon_start=1 FT /transl_table=1 FT /product="coat protein" FT /db_xref="GOA:O55501" FT /db_xref="InterPro:IPR001592" FT /db_xref="UniProtKB/TrEMBL:O55501" FT /protein_id="BAA24814.1" FT /translation="ASETEDAANVNTDKQVGKSKDKDKDVDVGTSGEFSVPKVKTLSDK FT MRLPRVGKKVILNGKHLLTYKPDQVDLYNTRATHAQFKTWYDAVKLEYELTDEQMKIVM FT NGLMVWCIENGTSQNLTGVWTMMDGANQMEYPLSPIIDNAKPTFRQIMAHFSDAAEAYI FT EYRNATEKYMPRYGLQRNLREYSLARYAFDFYEMNSKTPIRAKEAHMQMKAAAVRGVAN FT RMFGLDGNISTDDENTERHTAADVNKDHHTLLGLRM" XX SQ Sequence 1198 BP; 414 A; 218 C; 273 G; 293 T; 0 other; atatgatgag ttgttgcacg agatcagatt attttataag tgggtattgg agcaagcacc 60 atacaatcta atagcccaaa ctggcaaagc gccatatatt gcggaaacag cacttaaaag 120 attgtacatg gatgaacagg cgaccgagag tgagttagag aagtatagtc gactttacca 180 aatcttagat gaacgcatac caataccgag ttatgtgtca tatcaggctt cagaaacaga 240 agatgctgcc aatgtgaaca ctgacaagca ggttggaaag agcaaggata aggataaaga 300 tgtagacgtt ggcacatcag gtgaattttc agtgccaaaa gtgaaaacgc tatcggataa 360 aatgcgttta ccacgagttg ggaagaaggt aatacttaat ggcaaacatc ttttaactta 420 caaacccgat caagttgatc tatacaacac acgggcaaca cacgcacaat ttaaaacttg 480 gtatgacgca gtgaaactcg aatatgaatt gacggacgaa cagatgaaaa tagtcatgaa 540 tgggttgatg gtatggtgca ttgaaaacgg tacatcacaa aatctaacgg gagtgtggac 600 aatgatggat ggcgccaacc aaatggaata tccactcagt cctattattg acaatgcaaa 660 accaacattt agacaaataa tggcacattt cagtgacgca gctgaagcgt acattgaata 720 cagaaatgcc acagaaaaat acatgccccg gtatggactt cagcgaaact taagagaata 780 cagcttagca cgttacgcat tcgactttta tgagatgaat tcaaagacgc cgatccgcgc 840 gaaggaagct catatgcaga tgaaagcagc agcggttaga ggggtagcta accgcatgtt 900 tggcttggat ggtaacataa gcaccgatga tgagaacaca gaacgacata cagcagctga 960 tgtgaataag gatcatcaca cactgctcgg tcttcgtatg taataaacat atatatattt 1020 aatatatagt gtcgtgcatt atctttcgtt atatttgaat atgagcaaac acagtgtggt 1080 tacaccaccg tttgtggcat agtatatgat ataacttcgc tagcattatt tgcaccatgc 1140 gacttagtgt ggtcacacca cgagaagagt caagtgttgt acgttttgtt agggagac 1198 // ID AB000473; SV 1; linear; genomic RNA; STD; VRL; 1198 BP. XX AC AB000473; XX DT 13-FEB-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 4) XX DE Onion yellow dwarf virus gene for coat protein, partial cds. XX KW . XX OS Onion yellow dwarf virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-1198 RA Sumi S.; RT ; RL Submitted (13-JAN-1997) to the INSDC. RL Shin-ichiro Sumi, Wakunaga Pharmaceutical Co., Ltd., Institute for RL Biotechnology Research; 1624 Shimokotachi, Koda-Cho, Takata-Gun, Hiroshima RL 739-11, Japan (E-mail:sumi_s@wakunaga.co.jp, Tel:+81-826-45-2331, RL Fax:+81-826-45-4351) XX RN [2] RX DOI; 10.1023/A:1007975401845. RX PUBMED; 9354273. RA Tsuneyoshi T., Ikeda Y., Sumi S.; RT "Nucleotide sequences of the 3' terminal region of onion yellow dwarf virus RT isolates from Allium plants in Japan"; RL Virus Genes 15(1):73-77(1997). XX DR MD5; 3130d4dca9bce4e99a13b4c229a6e937. XX FH Key Location/Qualifiers FH FT source 1..1198 FT /organism="Onion yellow dwarf virus" FT /isolate="shimonitanegi" FT /mol_type="genomic RNA" FT /clone="11-28" FT /db_xref="taxon:43130" FT CDS <227..1003 FT /codon_start=1 FT /transl_table=1 FT /product="coat protein" FT /db_xref="GOA:O55502" FT /db_xref="InterPro:IPR001592" FT /db_xref="UniProtKB/TrEMBL:O55502" FT /protein_id="BAA24815.1" FT /translation="ASETEDAANVNTDKQVGKSKDKDKDVDVGTSGEFSVPKVKMLSDK FT MRLPRVGKKVILNGKHLLTYKPDQVDLYNTRATHAQFKTWYDAVKLEYELTDEQMKIVM FT NGLMVWCIENGTSQNLTGVWTMMDGDNQMEYPLSPIIDNAKPTFRQIMAHFSDAAEAYI FT EYRNATEKYMPRYGLQRNLREYSLARYAFDFYEMNSKTPIRAKEAHMQMKAAAVRGVAN FT RMFGLDGNISTDDENTERHTAADVNKDHHTLLGLRM" XX SQ Sequence 1198 BP; 410 A; 212 C; 278 G; 298 T; 0 other; atacgatgaa ttgttacacg agatcagatt attttataag tgggtgttag agcaagcacc 60 atataattta atagcccaaa ctgggaaggc gccgtatatt gcagaaacag cacttaaaag 120 attgtacatg gatgaacaag caactgagag tgagttagag aagtatagtc gactttacca 180 aatcttagat gagcacatac caacaccaag ttatgtgtca tatcaagctt cagaaacaga 240 agacgctgct aatgtgaaca ctgataagca ggttggaaag agtaaggata aggataaaga 300 tgttgacgtt ggtacatcgg gcgagttttc agtgccaaaa gtgaaaatgt tatcggataa 360 gatgcgtttg ccacgagttg ggaagaaggt aatacttaat ggcaaacacc ttttaactta 420 caagcctgat caggttgact tatacaatac acgggcaaca cacgcacagt ttaaaacgtg 480 gtatgacgca gtgaaactcg aatatgaact gacggatgaa cagatgaaaa tagtcatgaa 540 tgggttaatg gtgtggtgta ttgagaacgg cacatcacaa aacttaacgg gagtttggac 600 aatgatggat ggcgacaacc aaatggaata tccactcagc cctattattg acaacgcaaa 660 accaacattc agacaaataa tggcacattt cagtgacgca gctgaagcgt acattgaata 720 taggaatgcc acagaaaaat acatgccccg gtatggactt cagcgaaact taagagaata 780 cagcttagca cgttacgcat tcgactttta tgagatgaat tcaaagacgc cgatccgcgc 840 gaaggaagct catatgcaga tgaaagcagc agcggttaga ggggtagcta accgcatgtt 900 tggcttggat ggtaacataa gcaccgatga tgagaacaca gaacgacata cagcagctga 960 tgtgaataag gatcatcaca cactgctcgg tcttcgtatg taataaacat atatatattt 1020 aatatatagt gtcgtgcatt atctttcgtt atatttgaat atgagcaaac acagtgtggt 1080 tacaccaccg tttgtggcat agtatatgat ataacttcgc tagcattatt tgcaccatgc 1140 gacttagtgt ggtcacacca cgagaagagt caagtgttgt acgttttgtt agggagac 1198 // ID AB000474; SV 1; linear; genomic RNA; STD; VRL; 1199 BP. XX AC AB000474; XX DT 13-FEB-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 4) XX DE Onion yellow dwarf virus gene for coat protein, partial cds. XX KW . XX OS Onion yellow dwarf virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-1199 RA Sumi S.; RT ; RL Submitted (13-JAN-1997) to the INSDC. RL Shin-ichiro Sumi, Wakunaga Pharmaceutical Co., Ltd., Institute for RL Biotechnology Research; 1624 Shimokotachi, Koda-Cho, Takata-Gun, Hiroshima RL 739-11, Japan (E-mail:sumi_s@wakunaga.co.jp, Tel:+81-826-45-2331, RL Fax:+81-826-45-4351) XX RN [2] RX DOI; 10.1023/A:1007975401845. RX PUBMED; 9354273. RA Tsuneyoshi T., Ikeda Y., Sumi S.; RT "Nucleotide sequences of the 3' terminal region of onion yellow dwarf virus RT isolates from Allium plants in Japan"; RL Virus Genes 15(1):73-77(1997). XX DR MD5; fda7cdc739fd832a3abd343de6b6f4e4. XX FH Key Location/Qualifiers FH FT source 1..1199 FT /organism="Onion yellow dwarf virus" FT /isolate="rakkyo" FT /mol_type="genomic RNA" FT /clone="R9" FT /db_xref="taxon:43130" FT CDS <227..1003 FT /codon_start=1 FT /transl_table=1 FT /product="coat protein" FT /db_xref="GOA:O55503" FT /db_xref="InterPro:IPR001592" FT /db_xref="UniProtKB/TrEMBL:O55503" FT /protein_id="BAA24816.1" FT /translation="ASETEDAANVNTDKQVGKNKDKDKDVDVGTSGEFSVPKVKMLSDK FT MRLPRVGKKVILNGKHLLAYKPDQVDLYNTRATHAQFKTWYDAVKLEYELTDEQMKIVM FT NGLMVWCIENGTSQNLTGVWTMMDGDNQMEYPLSPIIDNAKPTFRQIMAHFSDAAEAYI FT EYRNATEKYMPRYGLQRNLREYSLARYAFDFYEMNSKTPIRAKEAHMQMKAAAVRGVVN FT RMFGLDGNISTDDENTERHTAADVNKDHHTLLGLRM" XX SQ Sequence 1199 BP; 403 A; 207 C; 285 G; 304 T; 0 other; atatgatgag ctgttgcatg aaattagatt attttacaag tgggtgctgg agcaagcacc 60 atataatcta atagcccaaa ctggaaaagc gccatatatt gcggagacag cacttaaaag 120 attgtatatg gatgaacaag cgactgagag tgagttagag aagtatagtc gactctacca 180 aatcttagat gagcgtatac caataccgag ttatgtgtca taccaggctt cagaaacaga 240 agatgctgct aatgtgaaca ctgataagca ggttggaaag aataaggata aggataagga 300 tgttgacgtt ggtacatcgg gtgagttttc agtaccaaaa gtgaagatgc tatcggataa 360 aatgcgtttg ccacgagtcg ggaagaaggt aattcttaat ggcaaacatc tcttagctta 420 caagcctgac caagttgact tatacaacac acgggcaacg catgcacagt ttaaaacgtg 480 gtacgacgca gtgaaacttg aatatgaact gacggacgaa cagatgaaaa tagtcatgaa 540 tgggttgatg gtgtggtgca ttgaaaacgg tacatcacaa aacttaacgg gagtttggac 600 gatgatggat ggtgataatc aaatggaata tccactcagt ccaatcattg acaacgcaaa 660 accaacattc agacaaataa tggcacattt cagtgacgca gctgaagcgt acattgaata 720 caggaatgcc acagaaaaat acatgccccg gtatggactt cagcgaaact taagagaata 780 cagcttagca cgttacgcgt tcgactttta tgagatgaat tcaaagacgc cgatccgcgc 840 gaaggaagct catatgcaga tgaaagcagc agcggttaga ggggtagtta accgtatgtt 900 tggcttggat ggtaacataa gcactgatga tgagaacaca gaacgacata cagcagctga 960 tgtgaataag gatcatcaca cactgctcgg tcttcgtatg taacaaacat atatatatat 1020 taatatatag tgtcgtgcat tatctttcgt tatatttgaa tatgagcaaa cacagtgtgg 1080 ttataccacc gtttgtggca tagtatatga tataacttcg ctagcattat ttgcaccatt 1140 tgatttagtg tggtcacacc acgagaagag tcaggtgttg tacgttttgt tagggagac 1199 // ID AB000521; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000521; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: M'-1''-1. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; 29e2c9663a9cebbd2ddf43499b013d59. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="M'-1''-1" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:P89540" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:P89540" FT /protein_id="BAA19136.1" FT /translation="VEINCTRPNNNTRKSIHIGPGRAFYATGSIIGDIRQAHCNRSR" XX SQ Sequence 129 BP; 59 A; 18 C; 26 G; 26 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa aaagtataca tataggacca 60 gggagagcat tttatgcaac aggaagcata ataggagata taagacaagc acattgtaac 120 cgtagtaga 129 // ID AB000522; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000522; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: M'-1'-1. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; e23b78caba3c3204fbb3834ce9d26717. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="M'-1'-1" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:P89541" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:P89541" FT /protein_id="BAA19137.1" FT /translation="VEINCTRPNNNTRKSIHIGPGRAFYATGSIIGDIRQAHCNFSR" XX SQ Sequence 129 BP; 59 A; 17 C; 25 G; 28 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa aaagtataca tataggacca 60 gggagagcat tttatgcaac aggaagcata ataggagata taagacaagc acattgtaac 120 tttagtaga 129 // ID AB000523; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000523; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: M'-1-1. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; 683078d3e4bb990f12f675192eece193. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="M'-1-1" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:P89542" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:P89542" FT /protein_id="BAA19138.1" FT /translation="VEINCTRPNNNTRKSIHIGPGRAFYATGSIIGDIRQAHCNLSR" XX SQ Sequence 129 BP; 59 A; 18 C; 25 G; 27 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa aaagtataca tataggacca 60 gggagagcat tttatgcaac aggaagcata ataggagata taagacaagc acattgtaac 120 cttagtaga 129 // ID AB000524; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000524; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: M'-2-4. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; eb0f1c9bef93a835b659bbdef934bf93. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="M'-2-4" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:Q788K8" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788K8" FT /protein_id="BAA19139.1" FT /translation="VEINCTRPNNNTRKSIHIGPGRAFYATGSIIGDIRQAHCNLSR" XX SQ Sequence 129 BP; 58 A; 18 C; 26 G; 27 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa aaagtataca tataggacca 60 gggagagcat tttatgcaac aggaagcata ataggagata taagacaagc gcattgtaac 120 cttagtaga 129 // ID AB000525; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000525; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: M'-3-1. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; 8d9b0de91876d7b4f7a16e5b31315d7a. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="M'-3-1" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:Q788K7" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788K7" FT /protein_id="BAA19140.1" FT /translation="VEINCTRPNNNTRKSIHIGPGRAFYATGSIIGDIRQAHCNLSR" XX SQ Sequence 129 BP; 58 A; 18 C; 26 G; 27 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa aaagtataca tataggacca 60 gggagagcat tttatgcaac gggaagcata ataggagata taagacaagc acattgtaac 120 cttagtaga 129 // ID AB000526; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000526; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: M'-4-1. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; b28a7086cd6c5dcedfd24ddff2ed47de. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="M'-4-1" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:Q788K6" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788K6" FT /protein_id="BAA19141.1" FT /translation="VEINCTRPNNNTRKSIHIGPGRAFYATGSIIGDIRQAHCNLSR" XX SQ Sequence 129 BP; 58 A; 18 C; 26 G; 27 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa aaagtataca tataggacca 60 gggagagcat tttatgcaac aggaagcata ataggagata taagacaggc acattgtaac 120 cttagtaga 129 // ID AB000527; SV 1; linear; genomic DNA; STD; VRL; 129 BP. XX AC AB000527; XX DT 17-FEB-1997 (Rel. 50, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 8) XX DE Human immunodeficiency virus 1 proviral env gene for envelope protein, DE partial cds, isolate: M'-5-1. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-129 RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojohbori T., RA Hachimori T., Yamazaki S., Honda M.; RT ; RL Submitted (24-DEC-1996) to the INSDC. RL Mitsuo Honda, National Institute of Health, AIDS Research Center; Toyama RL 1-23-1, Shinjukuku, Tokyo 162, Japan (E-mail:mhonda@nih.go.jp, RL Tel:81-3-5285-1111, Fax:81-3-5285-1183) XX RN [2] RX PUBMED; 9087955. RA Okamoto Y., Shiosaki K., Eda Y., Tokiyoshi S., Yamaguchi Y., Gojobori T., RA Hachimori T., Yamazaki S., Honda M.; RT "Father-to-mother-to-infant transmission of HIV-1: clonally transmitted RT isolate of infant mutates more rapidly than that of the mother and rapidly RT loses reactivity with neutralizing antibody"; RL Microbiol. Immunol. 41(2):131-138(1997). XX DR MD5; 5aa9e59662187ff6331181fdfabd6757. XX FH Key Location/Qualifiers FH FT source 1..129 FT /organism="Human immunodeficiency virus 1" FT /isolate="M'-5-1" FT /mol_type="genomic DNA" FT /proviral FT /db_xref="taxon:11676" FT CDS <1..>129 FT /codon_start=1 FT /gene="env" FT /product="envelope protein" FT /note="C2-V3 region of env gene" FT /db_xref="GOA:Q788K5" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788K5" FT /protein_id="BAA19142.1" FT /translation="VEINCTRPNNNTRKSIHIGPGRAFYATGSIIGDIRQAHCNLSR" XX SQ Sequence 129 BP; 59 A; 19 C; 25 G; 26 T; 0 other; gtagaaatta attgtacaag acccaacaat aatacaagaa aaagtataca tataggacca 60 gggagagcat tttacgcaac aggaagcata ataggagata taagacaagc acattgtaac 120 cttagtaga 129 // ID AB000604; SV 1; linear; genomic RNA; STD; VRL; 1136 BP. XX AC AB000604; XX DT 15-MAR-1999 (Rel. 59, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 5) XX DE Influenza C virus (C/Johannesburg/66) M gene for M1 protein and CM2 DE protein, complete cds. XX KW . XX OS Influenza C virus (C/Johannesburg/66) OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Gammainfluenzavirus. XX RN [1] RP 1-1136 RA Tada Y.; RT ; RL Submitted (10-JAN-1997) to the INSDC. RL Contact:Yuichiro Tada Yamagata University School of Medicine, Department of RL Bacteriology; Iida-nishi 2-2-2, Yamagata, Yamagata 990-9585, Japan XX RN [2] RX DOI; 10.1023/A:1007915215958. RX PUBMED; 9354270. RA Tada Y., Hongo S., Muraki Y., Sugawara K., Kitame F., Nakamura K.; RT "Evolutionary analysis of influenza C virus M genes"; RL Virus Genes 15(1):53-59(1997). XX DR MD5; 75a6398ca1a263317e7aa21a655be96f. DR EuropePMC; PMC2045542; 17686850. XX FH Key Location/Qualifiers FH FT source 1..1136 FT /organism="Influenza C virus (C/Johannesburg/66)" FT /segment="6" FT /host="Homo sapiens" FT /isolate="C/Johannesburg/66" FT /mol_type="genomic RNA" FT /db_xref="taxon:203223" FT CDS 4..1128 FT /codon_start=1 FT /gene="M" FT /db_xref="GOA:Q9YMB6" FT /db_xref="InterPro:IPR004267" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q9YMB6" FT /protein_id="BAA75824.1" FT /translation="MAHEILIAEAEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMKWLVVIIYFSITSQPASACNLKTCLKLFNNTDAVTVHCFN FT ENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSMEK FT DIALFRERLDLGEGAPDETDNSPIPFSNDGIFEI" FT CDS join(4..731,960) FT /codon_start=1 FT /gene="M" FT /product="M1 protein" FT /note="matrix protein" FT /db_xref="GOA:Q9WAD3" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q9WAD3" FT /protein_id="BAA75825.1" FT /translation="MAHEILIAEAEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMK" FT CDS 709..1128 FT /codon_start=1 FT /gene="M" FT /product="CM2 protein" FT /note="integral membrane protein" FT /db_xref="GOA:Q9WAD4" FT /db_xref="InterPro:IPR004267" FT /db_xref="UniProtKB/TrEMBL:Q9WAD4" FT /protein_id="BAA75826.1" FT /translation="MGRMAMKWLVVIIYFSITSQPASACNLKTCLKLFNNTDAVTVHCF FT NENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSME FT KDIALFRERLDLGEGAPDETDNSPIPFSNDGIFEI" XX SQ Sequence 1136 BP; 416 A; 189 C; 248 G; 283 T; 0 other; acaatggcac atgaaatatt gattgctgaa gcagaggcat ttctaaaaaa tgttgctcct 60 gagaccagga cagcaataat ttcagcaata acaggaggga aatcagcctg caaatcagca 120 gctaaactga ttaagaatga acatcttccc ctaatgtctg gagaagccac cacaatgcac 180 atcgttatga ggtgcttata tcctgaaata aaaccatgga aaaaggcaag cgacatgctg 240 aataaagcaa cttctagttt gaaaaaatca gaaggaagag acatcagaaa gcaaatgaaa 300 gcagctggag acttcttagg agtggagtca atgatgaaaa tgagggcctt tagagatgac 360 caaataatgg aaatggttga agaagtatat gatcacccag acgactacac accagacatc 420 cgaataggaa caatcacagc ttggttgaga tgcaagaaca agaaaagtga aagatacagg 480 agtaatgtct cagaaagtgg aagaacagct ttaaagattc atgaagtaag aaaagccagc 540 acagcaatga acgaaattgc tggtattact ggccttggag aagaagcact atctctccaa 600 agacaaacag aaagtttggc catattatgt aatcacactt ttggaagtaa tataatgaga 660 ccccacttgg aaaaagcaat aaaaggagtt gaaggcagag ttggagagat gggacgaatg 720 gcaatgaaat ggttagttgt tataatatat ttctctataa caagtcaacc tgcttctgct 780 tgcaatctaa agacctgtct aaaactattt aacaatactg atgcggtaac tgttcattgt 840 tttaatgaaa accaaggata catgctaaca ttagcctctt tgggattagg gataattact 900 atgttgtatt tattagtaaa aatcataatt gaacttgtca atggttttgt gctcggcaga 960 tgggagagat ggtgtggaga tataaagacc acaattatgc ctgaaattga ctcgatggaa 1020 aaagatattg ccctctttag ggagagactt gacctgggag aaggtgcccc tgacgaaacc 1080 gacaactcac caattccttt ttccaatgat ggtatttttg aaatttaatt accttg 1136 // ID AB000605; SV 1; linear; genomic RNA; STD; VRL; 1136 BP. XX AC AB000605; XX DT 15-MAR-1999 (Rel. 59, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 6) XX DE Influenza C virus (C/Sapporo/71) M gene for M1 protein and CM2 protein, DE complete cds. XX KW . XX OS Influenza C virus (C/Sapporo/71) OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Gammainfluenzavirus. XX RN [1] RP 1-1136 RA Tada Y.; RT ; RL Submitted (10-JAN-1997) to the INSDC. RL Contact:Yuichiro Tada Yamagata University School of Medicine, Department of RL Bacteriology; Iida-nishi 2-2-2, Yamagata, Yamagata 990-9585, Japan XX RN [2] RX DOI; 10.1023/A:1007915215958. RX PUBMED; 9354270. RA Tada Y., Hongo S., Muraki Y., Sugawara K., Kitame F., Nakamura K.; RT "Evolutionary analysis of influenza C virus M genes"; RL Virus Genes 15(1):53-59(1997). XX DR MD5; 2c82af9edf8a61b48a23ba7de5b589fd. XX FH Key Location/Qualifiers FH FT source 1..1136 FT /organism="Influenza C virus (C/Sapporo/71)" FT /segment="6" FT /host="Homo sapiens" FT /isolate="C/Sapporo/71" FT /mol_type="genomic RNA" FT /db_xref="taxon:199356" FT CDS 4..1128 FT /codon_start=1 FT /gene="M" FT /db_xref="GOA:Q788K4" FT /db_xref="InterPro:IPR004267" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788K4" FT /protein_id="BAA75827.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMKWLVVIIYFSITSQPASACNLKTCLNLFNNTDAVTVHCFN FT ENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSMEK FT DIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" FT CDS join(4..731,960) FT /codon_start=1 FT /gene="M" FT /product="M1 protein" FT /note="matrix protein" FT /db_xref="GOA:Q788K3" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788K3" FT /protein_id="BAA75828.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMK" FT CDS 709..1128 FT /codon_start=1 FT /gene="M" FT /product="CM2 protein" FT /note="integral membrane protein" FT /db_xref="GOA:Q788K2" FT /db_xref="InterPro:IPR004267" FT /db_xref="UniProtKB/TrEMBL:Q788K2" FT /protein_id="BAA75829.1" FT /translation="MGRMAMKWLVVIIYFSITSQPASACNLKTCLNLFNNTDAVTVHCF FT NENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSME FT KDIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" XX SQ Sequence 1136 BP; 419 A; 191 C; 244 G; 282 T; 0 other; acaatggcac atgaaatatt gattgctgaa acagaggcat ttctaaaaaa tgttgctcct 60 gagaccagga cagcaataat ttcagcaata acaggtggaa aatcagcctg caaatcagca 120 gctaaactga ttaagaatga acatcttccc ttaatgtctg gagaagccac cacaatgcac 180 attgttatga ggtgcttata tccagaaata aaaccatgga aaaaggcaag cgacatgctg 240 aataaagcaa cttctagttt gaaaaaatca gaaggaagag acatcagaaa gcaaatgaaa 300 gcagctggag acttcttggg agtggagtca atgatgaaaa tgagggcctt cagagatgac 360 caaataatgg aaatggttga agaagtatat gatcacccag acgactacac accagacatc 420 cgaataggaa caatcacagc ttggttgaga tgcaaaaaca agaaaagtga aagatacagg 480 agtaatgtct cagaaagtgg aagaacagct ttaaaaattc atgaagtaag aaaagccagc 540 acagcaatga acgaaattgc tggtattact ggccttggag aagaagcact atctctccaa 600 agacaaacag aaagtttggc catattatgc aatcacactt ttggaagtaa tataatgaga 660 ccccacttgg aaaaagcaat aaaaggagtt gaaggcagag ttggagagat gggacgaatg 720 gcaatgaaat ggttagttgt tataatatat ttctctataa caagtcaacc tgcttctgct 780 tgcaatctaa agacctgtct aaacctattt aacaatactg atgcagtaac tgttcattgt 840 tttaatgaaa accaaggata catgctaaca ttagcctctt tgggattagg gataattact 900 atgttgtatt tattagtaaa aatcataatt gaacttgtca atggttttgt gctcggcaga 960 tgggagagat ggtgtggaga tataaagacc acaattatgc ctgaaattga ctcgatggaa 1020 aaagatattg ccctctctag ggagagactt gacctgggag aggatgcccc tgacgaaacc 1080 gacaactcac caattccttt ttccaatgat ggtatttttg aaatttaatt accttg 1136 // ID AB000606; SV 1; linear; genomic RNA; STD; VRL; 1136 BP. XX AC AB000606; XX DT 15-MAR-1999 (Rel. 59, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 6) XX DE Influenza C virus (C/Kanagawa/1/76) M gene for M1 protein and CM2 protein, DE complete cds. XX KW . XX OS Influenza C virus (C/Kanagawa/1/76) OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Gammainfluenzavirus. XX RN [1] RP 1-1136 RA Tada Y.; RT ; RL Submitted (10-JAN-1997) to the INSDC. RL Contact:Yuichiro Tada Yamagata University School of Medicine, Department of RL Bacteriology; Iida-nishi 2-2-2, Yamagata, Yamagata 990-9585, Japan XX RN [2] RX DOI; 10.1023/A:1007915215958. RX PUBMED; 9354270. RA Tada Y., Hongo S., Muraki Y., Sugawara K., Kitame F., Nakamura K.; RT "Evolutionary analysis of influenza C virus M genes"; RL Virus Genes 15(1):53-59(1997). XX DR MD5; a402130132a22e9275f190e5129b95de. DR EuropePMC; PMC4634283; 23445084. XX FH Key Location/Qualifiers FH FT source 1..1136 FT /organism="Influenza C virus (C/Kanagawa/1/76)" FT /segment="6" FT /host="Homo sapiens" FT /isolate="C/Kanagawa/1/76" FT /mol_type="genomic RNA" FT /db_xref="taxon:165246" FT CDS 4..1128 FT /codon_start=1 FT /gene="M" FT /db_xref="GOA:Q788K1" FT /db_xref="InterPro:IPR004267" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788K1" FT /protein_id="BAA75830.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMKWLVVIIYFSITSQPASACNLKTCLNLFNNTDAVTVHCFN FT ENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSMEK FT DIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" FT CDS join(4..731,960) FT /codon_start=1 FT /gene="M" FT /product="M1 protein" FT /note="matrix protein" FT /db_xref="GOA:Q788K0" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788K0" FT /protein_id="BAA75831.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMK" FT CDS 709..1128 FT /codon_start=1 FT /gene="M" FT /product="CM2 protein" FT /note="integral membrane protein" FT /db_xref="GOA:Q788J9" FT /db_xref="InterPro:IPR004267" FT /db_xref="UniProtKB/TrEMBL:Q788J9" FT /protein_id="BAA75832.1" FT /translation="MGRMAMKWLVVIIYFSITSQPASACNLKTCLNLFNNTDAVTVHCF FT NENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSME FT KDIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" XX SQ Sequence 1136 BP; 419 A; 191 C; 245 G; 281 T; 0 other; acaatggcac atgaaatatt gattgctgaa acagaggcat ttctaaaaaa tgttgctcct 60 gagaccagga cagcaataat ttcagcaata acaggtggaa aatcagcctg caaatcagca 120 gctaaactga ttaagaatga acatcttccc ttaatgtctg gagaagcaac cacaatgcac 180 attgttatga ggtgcttata tccagaaata aaaccatgga aaaaggcaag cgacatgctg 240 aataaagcaa cttctagttt gaaaaaatca gaaggaagag acatcaggaa gcaaatgaaa 300 gcagctggag acttcttggg agtggagtca atgatgaaaa tgagggcctt cagagatgac 360 caaataatgg aaatggttga agaagtatat gatcacccag acgactacac accagacatc 420 cgaataggaa caatcacagc ctggttgaga tgcaaaaaca agaaaagtga aagatacagg 480 agtaatgtct cagaaagtgg aagaacagct ttaaaaattc atgaagtaag aaaagccagc 540 acagcaatga acgaaattgc tggtattact ggccttggag aagaagcact atctctccaa 600 agacaaacag aaagtttggc catattatgc aatcacactt ttggaagtaa tataatgaga 660 ccccacttgg aaaaagcaat aaaaggagtt gaaggcagag ttggagagat gggacgaatg 720 gcaatgaaat ggttagttgt tataatatat ttctctataa caagtcaacc tgcttctgct 780 tgcaatctaa agacctgtct aaacctattt aacaatactg atgcagtaac tgttcattgt 840 tttaatgaaa accaaggata catgctaaca ttagcctctt tgggattagg gataattact 900 atgttgtatt tattagtaaa aatcataatt gaacttgtca atggttttgt gctcggcaga 960 tgggagagat ggtgtggaga tataaagacc acaattatgc ctgaaattga ctcgatggaa 1020 aaagatattg ccctctctag ggagagactt gacctgggag aggatgcccc tgacgaaacc 1080 gacaactcac caattccttt ttccaatgat ggtatttttg aaatttaatt accttg 1136 // ID AB000607; SV 1; linear; genomic RNA; STD; VRL; 1136 BP. XX AC AB000607; XX DT 15-MAR-1999 (Rel. 59, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 6) XX DE Influenza C virus (C/Miyagi/77) M gene for M1 protein and CM2 protein, DE complete cds. XX KW . XX OS Influenza C virus (C/Miyagi/77) OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Gammainfluenzavirus. XX RN [1] RP 1-1136 RA Tada Y.; RT ; RL Submitted (10-JAN-1997) to the INSDC. RL Contact:Yuichiro Tada Yamagata University School of Medicine, Department of RL Bacteriology; Iida-nishi 2-2-2, Yamagata, Yamagata 990-9585, Japan XX RN [2] RX DOI; 10.1023/A:1007915215958. RX PUBMED; 9354270. RA Tada Y., Hongo S., Muraki Y., Sugawara K., Kitame F., Nakamura K.; RT "Evolutionary analysis of influenza C virus M genes"; RL Virus Genes 15(1):53-59(1997). XX DR MD5; b980ba73cff1712aabf2aaccde015929. XX FH Key Location/Qualifiers FH FT source 1..1136 FT /organism="Influenza C virus (C/Miyagi/77)" FT /segment="6" FT /host="Homo sapiens" FT /isolate="C/Miyagi/77" FT /mol_type="genomic RNA" FT /db_xref="taxon:165247" FT CDS 4..1128 FT /codon_start=1 FT /gene="M" FT /db_xref="GOA:Q788J8" FT /db_xref="InterPro:IPR004267" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788J8" FT /protein_id="BAA75833.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMKWLVVIIYFSITSQPASACNLKTCLNLFNNTDAVTVHCFN FT ENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSMEK FT DIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" FT CDS join(4..731,960) FT /codon_start=1 FT /gene="M" FT /product="M1 protein" FT /note="matrix protein" FT /db_xref="GOA:Q788J7" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788J7" FT /protein_id="BAA75834.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMK" FT CDS 709..1128 FT /codon_start=1 FT /gene="M" FT /product="CM2 protein" FT /note="integral membrane protein" FT /db_xref="GOA:Q788J6" FT /db_xref="InterPro:IPR004267" FT /db_xref="UniProtKB/TrEMBL:Q788J6" FT /protein_id="BAA75835.1" FT /translation="MGRMAMKWLVVIIYFSITSQPASACNLKTCLNLFNNTDAVTVHCF FT NENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSME FT KDIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" XX SQ Sequence 1136 BP; 417 A; 193 C; 244 G; 282 T; 0 other; acaatggcac atgaaatatt gattgctgaa acagaggcat ttctaaaaaa tgttgctcct 60 gagaccagga cagcaataat ttcagcaata acaggtggaa aatcagcctg caaatcagca 120 gctaaactga ttaagaatga acatcttccc ttaatgtctg gagaagccac cacaatgcac 180 attgttatga ggtgcttata tcctgaaata aaaccatgga aaaaggcaag cgacatgctg 240 aataaagcaa cttctagttt gaaaaaatca gaaggaagag acatcagaaa gcaaatgaaa 300 gcagctggag acttcttggg agtggagtca atgatgaaaa tgagggcctt cagagatgac 360 caaataatgg aaatggttga agaagtatat gatcacccag acgactacac accagacatc 420 cgaataggaa caatcacagc ctggttgaga tgcaaaaaca agaaaagtga aagatacagg 480 agtaatgtct ccgaaagtgg aagaacagct ttaaaaattc atgaagtaag aaaagccagc 540 acagcaatga acgaaattgc tggtattact ggccttggag aagaagcact atctctccaa 600 agacaaacag aaagtttggc catattatgc aatcacactt ttggaagtaa tataatgaga 660 ccccacttgg aaaaagcaat aaaaggagtt gaaggcagag ttggagagat gggacgaatg 720 gcaatgaaat ggttagttgt tataatatat ttctctataa caagtcaacc tgcttctgct 780 tgcaatctaa agacctgtct aaacctattt aacaatactg atgcagtaac tgttcattgt 840 tttaatgaaa accaaggata catgctaaca ttagcctctt tgggattagg gataattact 900 atgttgtatt tattagtaaa aatcataatt gaacttgtca atggttttgt gctcggcaga 960 tgggagagat ggtgtggaga tataaagacc acaattatgc ctgaaattga ctcgatggaa 1020 aaagatattg ccctctctag ggagagactt gacctgggag aggatgcccc tgacgaaacc 1080 gacaactcac caattccttt ttccaatgat ggtatttttg aaatttaatt accttg 1136 // ID AB000608; SV 1; linear; genomic RNA; STD; VRL; 1136 BP. XX AC AB000608; XX DT 15-MAR-1999 (Rel. 59, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 5) XX DE Influenza C virus (C/California/78) M gene for M1 protein and CM2 protein, DE complete cds. XX KW . XX OS Influenza C virus (C/California/78) OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Gammainfluenzavirus. XX RN [1] RP 1-1136 RA Tada Y.; RT ; RL Submitted (10-JAN-1997) to the INSDC. RL Contact:Yuichiro Tada Yamagata University School of Medicine, Department of RL Bacteriology; Iida-nishi 2-2-2, Yamagata, Yamagata 990-9585, Japan XX RN [2] RX DOI; 10.1023/A:1007915215958. RX PUBMED; 9354270. RA Tada Y., Hongo S., Muraki Y., Sugawara K., Kitame F., Nakamura K.; RT "Evolutionary analysis of influenza C virus M genes"; RL Virus Genes 15(1):53-59(1997). XX DR MD5; c30a147318a8364a9bcd4a50e701387c. XX FH Key Location/Qualifiers FH FT source 1..1136 FT /organism="Influenza C virus (C/California/78)" FT /segment="6" FT /host="Homo sapiens" FT /isolate="C/California/78" FT /mol_type="genomic RNA" FT /db_xref="taxon:203224" FT CDS 4..1128 FT /codon_start=1 FT /gene="M" FT /db_xref="GOA:Q788J5" FT /db_xref="InterPro:IPR004267" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/Swiss-Prot:Q788J5" FT /protein_id="BAA75836.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMKWLVVIIYFSITSKPASACNLKTCLNLFNNTDAVTVHCFN FT ENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSMEK FT DIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" FT CDS join(4..731,960) FT /codon_start=1 FT /gene="M" FT /product="M1 protein" FT /note="matrix protein" FT /db_xref="GOA:Q788J5" FT /db_xref="InterPro:IPR004267" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/Swiss-Prot:Q788J5" FT /protein_id="BAA75837.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMK" FT CDS 709..1128 FT /codon_start=1 FT /gene="M" FT /product="CM2 protein" FT /note="integral membrane protein" FT /db_xref="GOA:Q9WAD6" FT /db_xref="InterPro:IPR004267" FT /db_xref="UniProtKB/TrEMBL:Q9WAD6" FT /protein_id="BAA75838.1" FT /translation="MGRMAMKWLVVIIYFSITSKPASACNLKTCLNLFNNTDAVTVHCF FT NENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSME FT KDIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" XX SQ Sequence 1136 BP; 418 A; 192 C; 245 G; 281 T; 0 other; acaatggcac atgaaatatt gattgctgaa acagaggcat ttctaaaaaa tgttgctcct 60 gagaccagga cagcaataat ttcagcaata acaggtggaa aatcagcctg caaatcagca 120 gctaaactga tcaagaatga acatcttccc ttaatgtctg gagaagccac cacaatgcac 180 attgttatga ggtgcttata tcctgaaata aaaccatgga aaaaggcaag cgacatgctg 240 aataaagcaa cttctagttt gaaaaaatca gaaggaagag acatcagaaa gcaaatgaaa 300 gcagctggag acttcttggg agtggagtca atgatgaaaa tgagggcctt cagagatgac 360 caaataatgg aaatggttga agaagtatat gatcacccag acgactacac accagacatc 420 cgaataggaa caatcacagc ttggttgaga tgcaaaaaca agaaaagtga aagatacagg 480 agtaatgtct cagagagtgg aagaacagct ttaaaaattc atgaagtaag aaaagccagc 540 acagcaatga acgaaattgc tggtattact ggccttggag aagaagcact atctctccaa 600 agacaaacag aaagtttggc catattatgc aatcacacct ttggaagtaa tataatgaga 660 ccccacttgg aaaaagcaat aaaaggagtt gaaggcagag ttggagagat gggacgaatg 720 gcaatgaaat ggttagttgt tataatatat ttctctataa caagtaaacc tgcttctgct 780 tgcaatctaa agacttgtct aaacctattt aacaatactg atgcagtaac tgttcattgt 840 tttaatgaaa accaaggata catgctaaca ttagcctctt tgggattagg gataattact 900 atgttgtatt tattagtaaa aatcataatt gaacttgtca atggttttgt gctcggcaga 960 tgggagagat ggtgtggaga tataaagacc acaattatgc ctgaaattga ctcgatggaa 1020 aaagacattg ccctctctag ggagagactt gacctgggag aggatgcccc tgacgaaacc 1080 gacaactcac caattccttt ttccaatgat ggtatttttg aaatttaatt accttg 1136 // ID AB000609; SV 1; linear; genomic RNA; STD; VRL; 1136 BP. XX AC AB000609; XX DT 15-MAR-1999 (Rel. 59, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 5) XX DE Influenza C virus (C/Kyoto/1/79) M gene for M1 protein and CM2 protein, DE complete cds. XX KW . XX OS Influenza C virus (C/Kyoto/1/79) OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Gammainfluenzavirus. XX RN [1] RP 1-1136 RA Tada Y.; RT ; RL Submitted (10-JAN-1997) to the INSDC. RL Contact:Yuichiro Tada Yamagata University School of Medicine, Department of RL Bacteriology; Iida-nishi 2-2-2, Yamagata, Yamagata 990-9585, Japan XX RN [2] RX DOI; 10.1023/A:1007915215958. RX PUBMED; 9354270. RA Tada Y., Hongo S., Muraki Y., Sugawara K., Kitame F., Nakamura K.; RT "Evolutionary analysis of influenza C virus M genes"; RL Virus Genes 15(1):53-59(1997). XX DR MD5; f112fd84b6e6ae61eaa1c6a103562d4c. DR EuropePMC; PMC4634283; 23445084. XX FH Key Location/Qualifiers FH FT source 1..1136 FT /organism="Influenza C virus (C/Kyoto/1/79)" FT /segment="6" FT /host="Homo sapiens" FT /isolate="C/Kyoto/1/79" FT /mol_type="genomic RNA" FT /db_xref="taxon:199358" FT CDS 4..1128 FT /codon_start=1 FT /gene="M" FT /db_xref="GOA:Q9WAD7" FT /db_xref="InterPro:IPR004267" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q9WAD7" FT /protein_id="BAA75839.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMKWLVVIIYFSITSKPASACNLKTCLNLFNNTDAVTVHCFN FT ENQGYMLTLASLGLGIITMLYLLVKITIELVNGFVLGRWERWCGDIKTTIMPEIDSMEK FT DIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" FT CDS join(4..731,960) FT /codon_start=1 FT /gene="M" FT /product="M1 protein" FT /note="matrix protein" FT /db_xref="GOA:Q788J4" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788J4" FT /protein_id="BAA75840.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMK" FT CDS 709..1128 FT /codon_start=1 FT /gene="M" FT /product="CM2 protein" FT /note="integral membrane protein" FT /db_xref="GOA:Q9WAD8" FT /db_xref="InterPro:IPR004267" FT /db_xref="UniProtKB/TrEMBL:Q9WAD8" FT /protein_id="BAA75841.1" FT /translation="MGRMAMKWLVVIIYFSITSKPASACNLKTCLNLFNNTDAVTVHCF FT NENQGYMLTLASLGLGIITMLYLLVKITIELVNGFVLGRWERWCGDIKTTIMPEIDSME FT KDIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" XX SQ Sequence 1136 BP; 419 A; 194 C; 243 G; 280 T; 0 other; acaatggcac atgaaatatt gattgctgaa acagaggcat ttctaaaaaa tgttgctcct 60 gagaccagga cagcaataat ttcagcaata acaggtggaa aatcagcctg caaatcagca 120 gctaaactga tcaagaatga acatcttccc ttaatgtctg gagaagccac cacaatgcac 180 attgttatga ggtgcttata tcctgaaata aaaccatgga aaaaggcaag cgacatgctg 240 aataaagcaa cttctagttt gaaaaaatca gaaggaagag acatcagaaa gcaaatgaaa 300 gcagctggag acttcttggg agttgagtca atgatgaaaa tgagggcctt cagagatgac 360 caaataatgg aaatggttga agaagtatat gatcacccag acgactacac accagacatc 420 cgaataggaa caatcacagc ttggttgaga tgcaaaaaca agaaaagtga aagatacagg 480 agtaatgtct cagaaagtgg aagaacagct ttaaaaattc atgaagtaag aaaagccagc 540 acagcaatga acgaaattgc tggtattact ggccttggag aagaagcact atccctccaa 600 agacaaacag aaagtttggc catattatgc aatcacactt ttggaagtaa tataatgaga 660 ccccacttgg aaaaagcaat aaaaggagtt gaaggcagag ttggagagat gggacgaatg 720 gcaatgaaat ggttagttgt tataatatat ttctctataa caagtaaacc tgcttctgct 780 tgcaatctaa agacctgtct aaacctattt aacaatactg atgcagtaac tgttcattgt 840 tttaatgaaa accaaggata catgctaaca ttagcctctt tgggattagg gataattact 900 atgttgtatt tattagtaaa aatcacaatt gaacttgtca atggttttgt gctcggcaga 960 tgggagagat ggtgtggaga tataaagacc acaattatgc ctgaaattga ctcgatggaa 1020 aaagacattg ccctctctag ggagagactt gacctgggag aggatgcccc tgacgaaacc 1080 gacaactcac caattccttt ttccaatgat ggtatttttg aaatttaatt accttg 1136 // ID AB000610; SV 1; linear; genomic RNA; STD; VRL; 1136 BP. XX AC AB000610; XX DT 15-MAR-1999 (Rel. 59, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 5) XX DE Influenza C virus (C/Hyogo/1/83) M gene for M1 protein and CM2 protein, DE complete cds. XX KW . XX OS Influenza C virus (C/Hyogo/1/83) OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Gammainfluenzavirus. XX RN [1] RP 1-1136 RA Tada Y.; RT ; RL Submitted (10-JAN-1997) to the INSDC. RL Contact:Yuichiro Tada Yamagata University School of Medicine, Department of RL Bacteriology; Iida-nishi 2-2-2, Yamagata, Yamagata 990-9585, Japan XX RN [2] RX DOI; 10.1023/A:1007915215958. RX PUBMED; 9354270. RA Tada Y., Hongo S., Muraki Y., Sugawara K., Kitame F., Nakamura K.; RT "Evolutionary analysis of influenza C virus M genes"; RL Virus Genes 15(1):53-59(1997). XX DR MD5; 3d03e0d11c0ec3f8a87b288b9b6969d9. XX FH Key Location/Qualifiers FH FT source 1..1136 FT /organism="Influenza C virus (C/Hyogo/1/83)" FT /segment="6" FT /host="Homo sapiens" FT /isolate="C/Hyogo/1/83" FT /mol_type="genomic RNA" FT /db_xref="taxon:203225" FT CDS 4..1128 FT /codon_start=1 FT /gene="M" FT /db_xref="GOA:Q788J2" FT /db_xref="InterPro:IPR004267" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/Swiss-Prot:Q788J2" FT /protein_id="BAA75842.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMKWLVVIIYFSITSQPASACNLKTCLKLFNNTDAVTVHCFN FT ENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSMEK FT DIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" FT CDS join(4..731,960) FT /codon_start=1 FT /gene="M" FT /product="M1 protein" FT /note="matrix protein" FT /db_xref="GOA:Q788J2" FT /db_xref="InterPro:IPR004267" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/Swiss-Prot:Q788J2" FT /protein_id="BAA75843.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMK" FT CDS 709..1128 FT /codon_start=1 FT /gene="M" FT /product="CM2 protein" FT /note="integral membrane protein" FT /db_xref="GOA:Q788J1" FT /db_xref="InterPro:IPR004267" FT /db_xref="UniProtKB/TrEMBL:Q788J1" FT /protein_id="BAA75844.1" FT /translation="MGRMAMKWLVVIIYFSITSQPASACNLKTCLKLFNNTDAVTVHCF FT NENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSME FT KDIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" XX SQ Sequence 1136 BP; 421 A; 190 C; 243 G; 282 T; 0 other; acaatggcac atgaaatatt gattgctgaa acagaggcgt ttctaaaaaa tgttgctcct 60 gagaccagga cagcaataat ttcagcaata acaggaggga aatcagcctg caaatcagca 120 gctaaactga ttaagaatga acatcttccc ctaatgtctg gagaagccac cacaatgcac 180 atcgtcatga ggtgcttata tcctgaaata aaaccatgga aaaaggcaag cgacatgctg 240 aataaagcaa cttctagttt gaaaaaatca gaaggaagag acatcagaaa gcaaatgaaa 300 gcagctggag acttcttagg agtggagtca atgatgaaaa tgagggcctt tagagatgat 360 caaataatgg aaatggttga agaagtatat gatcacccag acgactatac accagacatc 420 cgaataggaa caatcacagc ttggttgaga tgcaaaaaca agaaaagtga aagatacagg 480 agtaatgtct cagaaagtgg aagaacagct ttaaagattc atgaagtaag aaaagccagc 540 acagcaatga acgaaattgc tggtattact ggccttggag aagaagcact atctctccaa 600 agacaaacag aaagtttggc catattatgt aatcacactt ttggaagtaa tataatgaga 660 ccccacttgg aaaaagcaat aaaaggagtt gaaggcagag ttggagagat gggacgaatg 720 gcaatgaaat ggttagttgt tataatatat ttctctataa caagtcaacc tgcttctgct 780 tgcaatctaa aaacctgtct aaaactattt aacaatactg atgcagtaac tgttcattgt 840 tttaatgaaa accaaggata catgctaaca ttagcctctt taggactagg gataattact 900 atgttgtatt tattagtaaa aatcataatt gaacttgtca atggttttgt actcggcaga 960 tgggagagat ggtgtggaga tataaagacc acaattatgc ctgaaattga ctcgatggaa 1020 aaagatattg ccctctctag ggagagactt gacctgggag aggatgcccc tgacgaaacc 1080 gacaactcac caattccttt ttccaatgat ggtatttttg aaatttaatt accttg 1136 // ID AB000611; SV 1; linear; genomic RNA; STD; VRL; 1136 BP. XX AC AB000611; XX DT 15-MAR-1999 (Rel. 59, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 5) XX DE Influenza C virus (C/Yamagata/1/86) M gene for M1 protein and CM2 protein, DE complete cds. XX KW . XX OS Influenza C virus (C/Yamagata/1/86) OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Gammainfluenzavirus. XX RN [1] RP 1-1136 RA Tada Y.; RT ; RL Submitted (10-JAN-1997) to the INSDC. RL Contact:Yuichiro Tada Yamagata University School of Medicine, Department of RL Bacteriology; Iida-nishi 2-2-2, Yamagata, Yamagata 990-9585, Japan XX RN [2] RX DOI; 10.1023/A:1007915215958. RX PUBMED; 9354270. RA Tada Y., Hongo S., Muraki Y., Sugawara K., Kitame F., Nakamura K.; RT "Evolutionary analysis of influenza C virus M genes"; RL Virus Genes 15(1):53-59(1997). XX DR MD5; 43576951e13ed4c3ccbde64fa9c057d0. XX FH Key Location/Qualifiers FH FT source 1..1136 FT /organism="Influenza C virus (C/Yamagata/1/86)" FT /segment="6" FT /host="Homo sapiens" FT /isolate="C/Yamagata/1/86" FT /mol_type="genomic RNA" FT /db_xref="taxon:199343" FT CDS 4..1128 FT /codon_start=1 FT /gene="M" FT /db_xref="GOA:Q9WAD9" FT /db_xref="InterPro:IPR004267" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q9WAD9" FT /protein_id="BAA75845.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT EGGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMKWLVVTIYFSIASQPASACNLKTCLNLFNNTDAVTVHCFN FT ENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSMEK FT DIALSRERLDLGEDAPDETDNSPIPFSNDGVFEI" FT CDS join(4..731,960) FT /codon_start=1 FT /gene="M" FT /product="M1 protein" FT /note="matrix protein" FT /db_xref="GOA:Q788J0" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788J0" FT /protein_id="BAA75846.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT EGGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMK" FT CDS 709..1128 FT /codon_start=1 FT /gene="M" FT /product="CM2 protein" FT /note="integral membrane protein" FT /db_xref="GOA:Q9WAE0" FT /db_xref="InterPro:IPR004267" FT /db_xref="UniProtKB/TrEMBL:Q9WAE0" FT /protein_id="BAA75847.1" FT /translation="MGRMAMKWLVVTIYFSIASQPASACNLKTCLNLFNNTDAVTVHCF FT NENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSME FT KDIALSRERLDLGEDAPDETDNSPIPFSNDGVFEI" XX SQ Sequence 1136 BP; 415 A; 193 C; 249 G; 279 T; 0 other; acaatggcac atgaaatatt gattgctgag acagaggcat ttctaaaaaa tgttgctcct 60 gaaaccagga cagcaataat ttcagcaata acaggaggga aatcagcctg caaatcagca 120 gctaaactga ttaagaatga acatcttccc ctaatgtctg gagaagccac cacaatgcac 180 atcgttatga ggtgcttata tcctgaaata aaaccatgga aaaaggcaag cgacatgctg 240 aataaagcaa cttctagttt gaaaaaatca gaaggaagag acatcagaaa gcaaatgaaa 300 gcagcaggag acttcttagg agtggagtca atgatgaaaa tgagggcctt tagagatgac 360 caaataatgg aaatggttga agaagtatat gatcatccag acgactacac accagacatc 420 cgaataggaa caatcacagc ttggttgaga tgcaaaaaca agaaaagtga aagatacagg 480 agtaatgtct cagaaggtgg aagaacagct ttaaagattc acgaagtaag aaaagccagc 540 acagcaatga acgaaattgc tggtattact ggccttggag aagaagcact atctctccaa 600 agacaaacag aaagtttggc catattatgt aatcacactt ttggaagtaa tataatgaga 660 ccccacttgg aaaaagcaat aaaaggagtt gaaggcagag ttggagagat gggacgaatg 720 gcaatgaaat ggttagttgt tacaatatat ttctctatag caagtcaacc tgcttctgct 780 tgcaatctaa agacctgtct aaacctattt aacaatactg atgcggtaac tgtccattgt 840 tttaatgaaa accaaggata catgctaaca ttagcctctt tgggattagg gataattact 900 atgttgtatt tattagtaaa aatcataatt gaacttgtca atggttttgt gctcggcaga 960 tgggagagat ggtgtggaga tataaagacc acaattatgc ctgaaattga ctcgatggaa 1020 aaagatattg ccctctctag ggagagactt gacctgggag aggatgcccc tgacgaaacc 1080 gacaactcac caattccttt ttccaatgat ggtgtttttg aaatttaatt accttg 1136 // ID AB000612; SV 1; linear; genomic RNA; STD; VRL; 1137 BP. XX AC AB000612; XX DT 15-MAR-1999 (Rel. 59, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 6) XX DE Influenza C virus (C/Yamagata/8/88) M gene for M1 protein and CM2 protein, DE complete cds. XX KW . XX OS Influenza C virus (C/Yamagata/8/88) OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Gammainfluenzavirus. XX RN [1] RP 1-1137 RA Tada Y.; RT ; RL Submitted (10-JAN-1997) to the INSDC. RL Contact:Yuichiro Tada Yamagata University School of Medicine, Department of RL Bacteriology; Iida-nishi 2-2-2, Yamagata, Yamagata 990-9585, Japan XX RN [2] RX DOI; 10.1023/A:1007915215958. RX PUBMED; 9354270. RA Tada Y., Hongo S., Muraki Y., Sugawara K., Kitame F., Nakamura K.; RT "Evolutionary analysis of influenza C virus M genes"; RL Virus Genes 15(1):53-59(1997). XX DR MD5; 13c5175531debe586e18f3f6488951e2. XX FH Key Location/Qualifiers FH FT source 1..1137 FT /organism="Influenza C virus (C/Yamagata/8/88)" FT /segment="6" FT /host="Homo sapiens" FT /isolate="C/Yamagata/8/88" FT /mol_type="genomic RNA" FT /db_xref="taxon:203226" FT CDS 5..1129 FT /codon_start=1 FT /gene="M" FT /db_xref="GOA:Q788I9" FT /db_xref="InterPro:IPR004267" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788I9" FT /protein_id="BAA75848.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMKWLVVIIYFSITSQPASACNLKTCLNLFNNTDAVTVHCFN FT ENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSMEK FT DIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" FT CDS join(5..732,961) FT /codon_start=1 FT /gene="M" FT /product="M1 protein" FT /note="matrix protein" FT /db_xref="GOA:Q788I8" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788I8" FT /protein_id="BAA75849.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMK" FT CDS 710..1129 FT /codon_start=1 FT /gene="M" FT /product="CM2 protein" FT /note="integral membrane protein" FT /db_xref="GOA:Q788I7" FT /db_xref="InterPro:IPR004267" FT /db_xref="UniProtKB/TrEMBL:Q788I7" FT /protein_id="BAA75850.1" FT /translation="MGRMAMKWLVVIIYFSITSQPASACNLKTCLNLFNNTDAVTVHCF FT NENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSME FT KDIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" XX SQ Sequence 1137 BP; 420 A; 191 C; 243 G; 283 T; 0 other; aacaatggca catgaaatat taattgccga aacagaggca tttctaaaaa atgttgctcc 60 tgagaccagg acagcaataa tttcagcaat aacaggtgga aaatcagcct gcaaatcagc 120 agctaaactg attaagaatg aacatcttcc cttaatgtct ggagaagcca ccacaatgca 180 cattgttatg aggtgcttat atcctgaaat aaaaccatgg aaaaaggcaa gcgacatgct 240 gaataaagca acttctagtt tgaaaaaatc agaaggaaga gacatcagaa agcaaatgaa 300 agcagctgga gactttttgg gagtggagtc aatgatgaaa atgagggcct tcagagatga 360 ccaaataatg gaaatggttg aagaagtata tgatcatcca gacgactaca caccagacat 420 ccgaataggg acaatcacag cttggttgag atgcaaaaac aagaaaagtg aaagatacag 480 gagcaatgtc tcagaaagtg gaagaacagc tttaaaaatt catgaagtaa gaaaagccag 540 cacagcaatg aacgaaattg ctggtattac tggccttgga gaagaagcac tatctctcca 600 aagacaaaca gaaagtttgg ccatattatg caatcacact tttggaagta atataatgag 660 accccacttg gaaaaagcaa taaaaggagt tgaaggcaga gttggagaga tgggacgaat 720 ggcaatgaaa tggttagttg ttataatata tttctctata acaagtcaac ctgcttctgc 780 ttgcaatcta aagacctgtc taaacctatt taacaatact gatgcagtaa ctgttcattg 840 ttttaatgaa aaccaaggat acatgctaac attagcctct ttaggattag ggataattac 900 tatgttgtat ttattagtaa aaatcataat tgaacttgtc aatggttttg tgctcggcag 960 atgggagaga tggtgtggag atataaagac cacaattatg cctgaaattg actcgatgga 1020 aaaagatatt gccctctcta gggagagact tgacctggga gaggatgccc ctgacgaaac 1080 cgacaactca ccaattcctt tttccaatga tggtattttt gaaatttaat taccttg 1137 // ID AB000613; SV 1; linear; genomic RNA; STD; VRL; 1136 BP. XX AC AB000613; XX DT 15-MAR-1999 (Rel. 59, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 6) XX DE Influenza C virus (C/Yamagata/10/89) M gene for M1 protein and CM2 protein, DE complete cds. XX KW . XX OS Influenza C virus (C/Yamagata/10/89) OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Gammainfluenzavirus. XX RN [1] RP 1-1136 RA Tada Y.; RT ; RL Submitted (10-JAN-1997) to the INSDC. RL Contact:Yuichiro Tada Yamagata University School of Medicine, Department of RL Bacteriology; Iida-nishi 2-2-2, Yamagata, Yamagata 990-9585, Japan XX RN [2] RX DOI; 10.1023/A:1007915215958. RX PUBMED; 9354270. RA Tada Y., Hongo S., Muraki Y., Sugawara K., Kitame F., Nakamura K.; RT "Evolutionary analysis of influenza C virus M genes"; RL Virus Genes 15(1):53-59(1997). XX DR MD5; 789441755a9e022d28ca40a9fc582070. XX FH Key Location/Qualifiers FH FT source 1..1136 FT /organism="Influenza C virus (C/Yamagata/10/89)" FT /segment="6" FT /host="Homo sapiens" FT /isolate="C/Yamagata/10/89" FT /mol_type="genomic RNA" FT /db_xref="taxon:203227" FT CDS 4..1128 FT /codon_start=1 FT /gene="M" FT /db_xref="GOA:Q788I6" FT /db_xref="InterPro:IPR004267" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788I6" FT /protein_id="BAA75851.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMKWLVVIIYFSITSQPASACNLKTCLNLFNNTDAVTVHCFN FT ENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSMEK FT DIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" FT CDS join(4..731,960) FT /codon_start=1 FT /gene="M" FT /product="M1 protein" FT /note="matrix protein" FT /db_xref="GOA:Q788I5" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788I5" FT /protein_id="BAA75852.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMK" FT CDS 709..1128 FT /codon_start=1 FT /gene="M" FT /product="CM2 protein" FT /note="integral membrane protein" FT /db_xref="GOA:Q788I4" FT /db_xref="InterPro:IPR004267" FT /db_xref="UniProtKB/TrEMBL:Q788I4" FT /protein_id="BAA75853.1" FT /translation="MGRMAMKWLVVIIYFSITSQPASACNLKTCLNLFNNTDAVTVHCF FT NENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSME FT KDIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" XX SQ Sequence 1136 BP; 416 A; 192 C; 245 G; 283 T; 0 other; acaatggcac atgaaatatt gattgctgaa acagaggcat ttctaaaaaa tgttgctcct 60 gagaccagga cagcaataat ttcagcaata acaggtggaa aatcagcctg caaatcagca 120 gctaaactga tcaagaatga acatcttccc ttaatgtctg gagaagccac cacaatgcac 180 attgttatga ggtgcctata tcctgaaata aaaccatgga aaaaggcaag cgacatgctg 240 aataaagcaa cttctagttt gaaaaaatca gaaggaagag acatcagaaa gcaaatgaaa 300 gcagctggag actttttggg agtggagtca atgatgaaaa tgagggcctt cagagatgac 360 caaataatgg aaatggttga agaagtatat gatcacccag acgactacac accagacatc 420 cgaataggaa caatcacagc ttggttgaga tgcaaaaaca agaaaagtga aagatacagg 480 agtaatgtct cagaaagtgg aagaacagct ttaaaaattc atgaagtaag aaaagccagc 540 acagcaatga acgaaattgc tggtattact ggccttggag aagaagcact atctctccag 600 agacaaacag aaagtttggc catattatgc aatcacactt ttggaagtaa tataatgaga 660 ccccacttgg aaaaagcaat aaaaggagtt gaaggcagag ttggagagat gggacgaatg 720 gcgatgaaat ggttagttgt tataatatat ttctctataa caagtcaacc tgcttctgct 780 tgcaatctaa agacctgtct aaacctattt aacaatactg atgcagtaac tgttcattgt 840 tttaatgaaa accaaggata catgctaaca ttagcctctt tgggattagg gataattact 900 atgttgtatt tattagtaaa aatcataatt gaacttgtca atggttttgt gctcggcaga 960 tgggagagat ggtgtggaga tataaagacc acaattatgc ctgaaattga ctctatggaa 1020 aaagatattg ccctctctag ggagagactt gacctgggag aggatgcccc tgacgaaacc 1080 gacaactcac caattccttt ttccaatgat ggtatttttg aaatttaatt accttg 1136 // ID AB000614; SV 1; linear; genomic RNA; STD; VRL; 1136 BP. XX AC AB000614; XX DT 15-MAR-1999 (Rel. 59, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 6) XX DE Influenza C virus (C/Miyagi/9/91) M gene for M1 protein and CM2 protein, DE complete cds. XX KW . XX OS Influenza C virus (C/Miyagi/9/91) OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Gammainfluenzavirus. XX RN [1] RP 1-1136 RA Tada Y.; RT ; RL Submitted (10-JAN-1997) to the INSDC. RL Contact:Yuichiro Tada Yamagata University School of Medicine, Department of RL Bacteriology; Iida-nishi 2-2-2, Yamagata, Yamagata 990-9585, Japan XX RN [2] RX DOI; 10.1023/A:1007915215958. RX PUBMED; 9354270. RA Tada Y., Hongo S., Muraki Y., Sugawara K., Kitame F., Nakamura K.; RT "Evolutionary analysis of influenza C virus M genes"; RL Virus Genes 15(1):53-59(1997). XX DR MD5; 59a0d120b0979af8353876b38fae8b6b. XX FH Key Location/Qualifiers FH FT source 1..1136 FT /organism="Influenza C virus (C/Miyagi/9/91)" FT /segment="6" FT /host="Homo sapiens" FT /isolate="C/Miyagi/9/91" FT /mol_type="genomic RNA" FT /db_xref="taxon:203228" FT CDS 4..1128 FT /codon_start=1 FT /gene="M" FT /db_xref="GOA:Q788I3" FT /db_xref="InterPro:IPR004267" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788I3" FT /protein_id="BAA75854.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMKWLVVIIYFSITSQPASACNLKTCLNLFNNTDAVTVHCFN FT ENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSMEK FT DIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" FT CDS join(4..731,960) FT /codon_start=1 FT /gene="M" FT /product="M1 protein" FT /note="matrix protein" FT /db_xref="GOA:Q788I2" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788I2" FT /protein_id="BAA75855.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMK" FT CDS 709..1128 FT /codon_start=1 FT /gene="M" FT /product="CM2 protein" FT /note="integral membrane protein" FT /db_xref="GOA:Q788I1" FT /db_xref="InterPro:IPR004267" FT /db_xref="UniProtKB/TrEMBL:Q788I1" FT /protein_id="BAA75856.1" FT /translation="MGRMAMKWLVVIIYFSITSQPASACNLKTCLNLFNNTDAVTVHCF FT NENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSME FT KDIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" XX SQ Sequence 1136 BP; 417 A; 192 C; 245 G; 282 T; 0 other; acaatggcac atgaaatatt gattgctgaa acagaggcat ttctaaaaaa tgttgctcct 60 gagaccagga cagcaataat ttcagcaata acaggtggaa aatcagcctg caaatcagca 120 gctaaactga tcaagaatga acatcttccc ttaatgtctg gagaagccac cacaatgcac 180 attgttatga ggtgcctata tcctgaaata aaaccatgga aaaaggcaag cgacatgctg 240 aataaagcaa cttctagttt gaaaaaatca gaaggaagag acatcagaaa gcaaatgaaa 300 gcagctggag actttttggg agtggagtca atgatgaaaa tgagggcctt cagagatgac 360 caaataatgg aaatggttga agaagtatat gatcacccag acgactacac accagacatc 420 cgaataggaa caatcacagc ttggttgaga tgcaaaaaca agaaaagtga aagatacagg 480 agtaatgtct cagaaagtgg aagaacagct ttaaaaattc atgaagtaag aaaagccagc 540 acagcaatga acgaaattgc tggtattact ggccttggag aagaagcact atctctccaa 600 agacaaacag aaagtttggc catattatgc aatcacactt ttggaagtaa tataatgaga 660 ccccacttgg aaaaagcaat aaaaggagtt gaaggcagag ttggagagat gggacgaatg 720 gcgatgaaat ggttagttgt tataatatat ttctctataa caagtcaacc tgcttctgct 780 tgcaatctaa agacctgtct aaacctattt aacaatactg atgcagtaac tgttcattgt 840 tttaatgaaa accaaggata catgctaaca ttagcctctt tgggattagg gataattact 900 atgttgtatt tattagtaaa aatcataatt gaacttgtca atggttttgt gctcggcaga 960 tgggagagat ggtgtggaga tataaagacc acaattatgc ctgaaattga ctcgatggaa 1020 aaagatattg ccctctctag ggagagactt gacctgggag aggatgcccc tgacgaaacc 1080 gacaactcac caattccttt ttccaatgat ggtatttttg aaatttaatt accttg 1136 // ID AB000709; SV 2; linear; mRNA; STD; VRL; 6357 BP. XX AC AB000709; XX DT 27-FEB-1997 (Rel. 51, Created) DT 12-SEP-2017 (Rel. 134, Last updated, Version 7) XX DE Pepper mild mottle virus mRNA for 126 kDa protein, 183kDa protein, 28kDa DE protein, 17kDa protein, complete cds. XX KW . XX OS Pepper mild mottle virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6357 RA Kirita M.; RT ; RL Submitted (25-JAN-1997) to the INSDC. RL Contact:Masanobu Kirita Plant Biotechnology Institute, Laboratory of RL Biological Control; Ago 3165-1, Iwama, Nishi-Ibaraki, Ibaraki 319-02, Japan XX RN [2] RA Kirita M., Akutsu K., Watanabe Y., Tsuda S.; RT "Nucleotide Sequence of the Japanese Isolate of Pepper Mild Mottle RT Tobamovirus (TMV-P) RNA"; RL Nippon Shokubutsu Byori Gakkaiho 63:373-376(1997). XX DR MD5; 75b4f6468d6902939c12fa88f43343c9. DR EuropePMC; PMC4290914; 25339401. DR EuropePMC; PMC5834335; 29496844. DR RFAM; RF01072; TMV_UPD-PK3. DR RFAM; RF01088; TLS-PK5. XX FH Key Location/Qualifiers FH FT source 1..6357 FT /organism="Pepper mild mottle virus" FT /strain="JAPAN" FT /isolate="PMMoV-J" FT /mol_type="mRNA" FT /db_xref="taxon:12239" FT CDS 70..4908 FT /codon_start=1 FT /transl_except=(pos:3421..3423,aa:Tyr) FT /product="183kDa protein" FT /note="read through" FT /db_xref="GOA:P89657" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/Swiss-Prot:P89657" FT /protein_id="BAA19167.1" FT /translation="MAYTQQATNAALASTLRGNNPLVNDLANRRLYESAVEQCNAHDRR FT PKVNFLRSISEEQTLIATKAYPEFQITFYNTQNAVHSLAGGLRSLELEYLMMQIPYGST FT TYDIGGNFAAHMFKGRDYVHCCMPNMDLRDVMRHNAQKDSIELYLSKLAQKKKVIPPYQ FT KPCFDKYTDDPQSVVCSKPFQHCEGVSHCTDKVYAVALHSLYDIPADEFGAALLRRNVH FT VCYAAFHFSENLLLEDSYVSLDDIGAFFSREGDMLNFSFVAESTLNYTHSYSNVLKYVC FT KTYFPASSREVYMKEFLVTRVNTWFCKFSRLDTFVLYRGVYHRGVDKEQFYSAMEDAWH FT YKKTLAMMNSERILLEDSSSVNYWFPKMKDMVIVPLFDVSLQNEGKRLARKEVMVSKDF FT VYTVLNHIRTYQSKALTYANVLSFVESIRSRVIINGVTARSEWDVDKALLQSLSMTFFL FT QTKLAMLKDDLVVQKFQVHSKSLTEYVWDEITAAFHNCFPTIKERLINKKLITVSEKAL FT EIKVPDLYVTFHDRLVKEYKSSVEMPVLDVKKSLEEAEVMYNALSEISILKDSDKFDVD FT VFSRMCNTLGVDPLVAAKVMVAVVSNESGLTLTFERPTEANVALALQPTITSKEEGSLK FT IVSSDVGESSIKEVVRKSEISMLGLTGNTVSDEFQRSTEIESLQQFHMVSTETIIRKQM FT HAMVYTGPLKVQQCKNYLDSLVASLSAAVSNLKKIIKDTAAIDLETKEKFGVYDVCLKK FT WLVKPLSKGHAWGVVMDSDYKCFVALLTYDGENIVCGETWRRVAVSSESLVYSDMGKIR FT AIRSVLKDGEPHISSAKVTLVDGVPGCGKTKEILSRVNFDEDLVLVPGKQAAEMIRRRA FT NSSGLIVATKENVRTVDSFLMNYGRGPCQYKRLFLDEGLMLHPGCVNFLVGMSLCSEAF FT VYGDTQQIPYINRVATFPYPKHLSQLEVDAVETRRTTLRCPADITFFLNQKYEGQVMCT FT SSVTRSVSHEVIQGAAVMNPVSKPLKGKVITFTQSDKSLLLSRGYEDVHTVHEVQGETF FT EDVSLVRLTPTPVGIISKQSPHLLVSLSRHTRSIKYYTVVLDAVVSVLRDLECVSSYLL FT DMYKVDVSTQYQLQIESVYKGVNLFVAAPKTGDVSDMQYYYDKCLPGNSTILNEYDAVT FT MQIRENSLNVKDCVLDMSKSVPLPRESETTLKPVIRTAAEKPRKPGLLENLVAMIKRNF FT NSPELVGVVDIEDTASLVVDKFFDAYLIKEKKKPKNIPLLSRASLERWIEKQEKSTIGQ FT LADFDFIDLPAVDQYRHMIKQQPKQRLDLSIQTEYPALQTIVYHSKKINALFGPVFSEL FT TRQLLETIDSSRFMFYTRKTPTQIEEFFSDLDSNVPMDILELDISKYDKSQNEFHCAVE FT YEIWKRLGLDDFLAEVWKHGHRKTTLKDYTAGIKTCLWYQRKSGDVTTFIGNTIIIAAC FT LSSMLPMERLIKGAFCGDDSILYFPKGTDFPDIQQGANLLWNFEAKLFRKRYGYFCGRY FT IIHHDRGCIVYYDPLKLISKLGAKHIKNREHLEEFRTSLCDVAGSLNNCAYYTHLDDAV FT GEVIKTAPPGSFVYRALVKYLCDKRLFQTLFLE" FT CDS 70..3423 FT /codon_start=1 FT /product="126 kDa protein" FT /db_xref="GOA:P89657" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/Swiss-Prot:P89657" FT /protein_id="BAA19166.1" FT /translation="MAYTQQATNAALASTLRGNNPLVNDLANRRLYESAVEQCNAHDRR FT PKVNFLRSISEEQTLIATKAYPEFQITFYNTQNAVHSLAGGLRSLELEYLMMQIPYGST FT TYDIGGNFAAHMFKGRDYVHCCMPNMDLRDVMRHNAQKDSIELYLSKLAQKKKVIPPYQ FT KPCFDKYTDDPQSVVCSKPFQHCEGVSHCTDKVYAVALHSLYDIPADEFGAALLRRNVH FT VCYAAFHFSENLLLEDSYVSLDDIGAFFSREGDMLNFSFVAESTLNYTHSYSNVLKYVC FT KTYFPASSREVYMKEFLVTRVNTWFCKFSRLDTFVLYRGVYHRGVDKEQFYSAMEDAWH FT YKKTLAMMNSERILLEDSSSVNYWFPKMKDMVIVPLFDVSLQNEGKRLARKEVMVSKDF FT VYTVLNHIRTYQSKALTYANVLSFVESIRSRVIINGVTARSEWDVDKALLQSLSMTFFL FT QTKLAMLKDDLVVQKFQVHSKSLTEYVWDEITAAFHNCFPTIKERLINKKLITVSEKAL FT EIKVPDLYVTFHDRLVKEYKSSVEMPVLDVKKSLEEAEVMYNALSEISILKDSDKFDVD FT VFSRMCNTLGVDPLVAAKVMVAVVSNESGLTLTFERPTEANVALALQPTITSKEEGSLK FT IVSSDVGESSIKEVVRKSEISMLGLTGNTVSDEFQRSTEIESLQQFHMVSTETIIRKQM FT HAMVYTGPLKVQQCKNYLDSLVASLSAAVSNLKKIIKDTAAIDLETKEKFGVYDVCLKK FT WLVKPLSKGHAWGVVMDSDYKCFVALLTYDGENIVCGETWRRVAVSSESLVYSDMGKIR FT AIRSVLKDGEPHISSAKVTLVDGVPGCGKTKEILSRVNFDEDLVLVPGKQAAEMIRRRA FT NSSGLIVATKENVRTVDSFLMNYGRGPCQYKRLFLDEGLMLHPGCVNFLVGMSLCSEAF FT VYGDTQQIPYINRVATFPYPKHLSQLEVDAVETRRTTLRCPADITFFLNQKYEGQVMCT FT SSVTRSVSHEVIQGAAVMNPVSKPLKGKVITFTQSDKSLLLSRGYEDVHTVHEVQGETF FT EDVSLVRLTPTPVGIISKQSPHLLVSLSRHTRSIKYYTVVLDAVVSVLRDLECVSSYLL FT DMYKVDVSTQ" FT CDS 4909..5682 FT /codon_start=1 FT /product="28kDa protein" FT /db_xref="GOA:P89658" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/Swiss-Prot:P89658" FT /protein_id="BAA19168.1" FT /translation="MALVVKDDVKISEFINLSAAEKFLPAVMTSVKTVRISKVDKVIAM FT ENDSLSDVDLLKGVKLVKDGYVCLAGLVVSGEWNLPDNCRGGVSVCLVDKRMQRDDEAT FT LGSYRTSAAKKRFAFKLIPNYSITTADAERKVWQVLVNIRGVAMEKGFCPLSLEFVSVC FT IVHKSNIKLGLREKITSVSEGGPVELTEAVVDEFIESVPMADRLRKFRNQSKKGSNKYV FT GKRNDNKGLNKEGKLFDKVRIGQNSESSDAESSSF" FT CDS 5685..6158 FT /codon_start=1 FT /product="17kDa protein" FT /db_xref="GOA:P69509" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/Swiss-Prot:P69509" FT /protein_id="BAA19169.1" FT /translation="MAYTVSSANQLVYLGSVWADPLELQNLCTSALGNQFQTQQARTTV FT QQQFSDVWKTIPTATVRFPATGFKVFRYNAVLDSLVSALLGAFDTRNRIIEVENPQNPT FT TAETLDATRRVDDATVAIRASISNLMNELVRGTGMYNQALFESASGLTWATTP" XX SQ Sequence 6357 BP; 1881 A; 1172 C; 1520 G; 1784 T; 0 other; gtaaattttt cacaatttaa caacaacaac acaaacaaca aacaacatta caaacaaaat 60 acaactacaa tggcttacac acaacaagct accaacgccg cattagcaag tactctccga 120 gggaataacc ccttggtgaa cgatcttgct aatcggagac tgtacgaatc agcggtcgaa 180 caatgcaatg cacatgaccg caggcccaag gttaattttt taaggtcgat aagcgaagag 240 cagacgctta tcgcaactaa ggcctaccct gagttccaaa tcacgttcta caacacgcag 300 aacgctgtgc acagtctcgc aggtggactt cggtctttgg aactagaata cttgatgatg 360 cagatcccct acggttcaac gacatatgat atcgggggaa attttgctgc tcacatgttt 420 aaaggtcgtg actacgttca ttgctgcatg cctaacatgg acttacgtga cgtcatgcgt 480 cacaatgctc aaaaggatag cattgaactg tacctttcaa agcttgcgca aaagaaaaag 540 gtaataccgc catatcaaaa gccatgcttt gataaataca cggacgatcc gcaatcagta 600 gtgtgctcga aaccttttca gcactgcgaa ggcgtttcgc actgcacgga taaagtatac 660 gctgtcgctt tgcacagttt atacgacatt ccagcagatg aatttggggc agcacttctg 720 aggagaaatg ttcatgtctg ctatgctgcc ttccactttt ctgagaatct tcttttagaa 780 gattcgtatg tcagtcttga cgacataggc gctttcttct cgagagaggg cgatatgttg 840 aacttttctt ttgtagcaga gagtacttta aattatactc attcctatag taatgtgctt 900 aagtatgtgt gtaagactta cttccccgct tctagtagag aagtgtacat gaaggagttt 960 ttggtaacta gggtaaatac ttggttttgt aagttttcaa ggttagatac ctttgtacta 1020 tatagaggtg tataccacag aggtgtagac aaggagcaat tttacagtgc aatggaagat 1080 gcttggcatt acaaaaagac tttggcgatg atgaatagcg aaagaatcct cttagaggat 1140 tcatcgtctg ttaattattg gtttccaaag atgaaagata tggtgatagt acctttgttc 1200 gacgtatctt tacagaacga ggggaaaagg ttagcaagaa aggaggtcat ggtcagcaag 1260 gacttcgttt atactgtgct taatcatatt cgcacatacc agtcgaaagc gcttacttac 1320 gccaatgtat tatcgttcgt tgagtcgata agatcaagag tgataatcaa tggggtgact 1380 gcgcgctcag agtgggatgt ggataaggct ttgttgcagt ccctgtcaat gacttttttc 1440 ttgcagacca aattggccat gctcaaggat gacctcgtgg ttcagaaatt ccaagtgcat 1500 tccaaatcgc tcactgaata tgtctgggat gagattactg ctgcttttca caattgtttt 1560 cctacaatca aggagaggtt gattaacaag aaactcataa ctgtttcgga aaaggctctt 1620 gaaattaaag tacctgattt gtatgtaact ttccacgata gattggttaa ggagtacaag 1680 tcttcggtgg aaatgccggt actggacgtt aaaaagagct tggaagaagc agaagtgatg 1740 tacaatgctt tgtcagaaat ctcaattctt aaagacagtg acaagtttga tgttgatgtt 1800 ttttcccgga tgtgtaatac attaggcgta gatccattgg tggcagcaaa ggtaatggta 1860 gctgtggttt caaatgagag tggtttgacc ttaacgtttg agaggcctac cgaagcaaat 1920 gtcgcacttg cattgcaacc gacaattaca tcaaaggagg aaggttcgtt gaagattgtg 1980 tcgtcagacg taggtgagtc ctcaatcaag gaagtggttc gaaaatcaga gatttctatg 2040 cttggtctaa caggcaacac agtgtccgat gagttccaaa gaagtacaga aatcgagtcg 2100 ttgcagcagt tccatatggt atccacagag acgattatcc gtaaacagat gcatgcgatg 2160 gtgtatactg gtccgctaaa agttcaacaa tgcaagaact atttagacag cctggtagcc 2220 tcgctctctg ctgcggtatc aaacctgaag aagataatca aagacacagc tgctatagat 2280 ctcgagacta aggaaaaatt tggagtctac gacgtgtgcc ttaagaaatg gttggtgaaa 2340 cctctatcaa aaggacatgc ttggggtgtg gtgatggact cagactataa gtgctttgtt 2400 gcgcttctca catacgatgg cgagaacatt gtgtgcggag agacatggcg tagagtcgca 2460 gtgagctccg aatctttggt gtattcagat atggggaaga taagagctat acgctctgtg 2520 cttaaagacg gtgaacccca tataagcagt gcaaaggtta cacttgttga tggtgttcct 2580 ggttgcggaa agacaaagga gattctttct agggtcaact ttgacgaaga tctagttctg 2640 gtaccaggaa aacaggctgc tgaaatgata agaagaaggg caaacagttc tggtttaatc 2700 gtggcgacca aggagaatgt aaggacggta gactctttct taatgaatta cggtcgaggt 2760 ccgtgccaat acaaaaggct gtttctggat gaaggtctaa tgttacaccc tggttgtgtt 2820 aattttctgg ttggcatgtc tctatgctcc gaggcttttg tttatggaga cacccagcag 2880 attccttaca tcaacagagt tgcaactttt ccctatccta agcatttgag tcaactcgag 2940 gtcgatgctg ttgaaactcg cagaacaacg ttgcggtgtc cagctgatat caccttcttc 3000 ttgaatcaga agtacgaagg gcaagttatg tgcacatcaa gtgttacacg ctcggtgtca 3060 cacgaggtca tccaaggtgc agcggtaatg aatccagtgt ctaaaccact taaagggaag 3120 gtgattacat tcactcagtc agacaagtca ttgctgctct cgaggggtta cgaagatgtg 3180 cataccgttc atgaggtgca aggggaaacg tttgaagacg tctcactagt gaggctgacg 3240 cctacacccg tgggaataat ttcaaagcag agtccgcacc tgttggtctc attgtctagg 3300 catacaaggt cgatcaaata ttacacagtt gtgctagatg cagtcgtttc agtgcttaga 3360 gatctggagt gtgtgagtag ttacctgtta gatatgtaca aagttgatgt gtcgactcaa 3420 tagcaattac agatagaatc ggtgtacaaa ggtgttaacc ttttcgtcgc agcaccaaaa 3480 acaggagatg tttctgacat gcaatattat tacgacaagt gtttgccggg aaacagtact 3540 atactcaatg agtatgatgc tgtaaccatg caaatacgag agaatagttt gaatgtcaag 3600 gattgtgtgt tggatatgtc gaaatcggtg cctcttccga gagaatctga gacgacattg 3660 aaacctgtga tcaggactgc tgctgaaaaa cctcgaaaac ctggattgtt ggaaaatttg 3720 gtcgcgatga tcaaaagaaa tttcaactct cccgaattag taggggttgt tgacatcgaa 3780 gacaccgctt ctctagtagt agataagttt tttgatgcat acttaattaa agaaaagaaa 3840 aaaccaaaaa atatacctct gctttcaagg gcgagtttgg aaagatggat cgaaaagcaa 3900 gagaagtcaa caattggcca gttggctgat tttgacttta ttgatttacc agccgttgat 3960 caatacaggc acatgatcaa gcagcagccg aaacagcgtt tggatcttag tattcaaact 4020 gaatacccgg ctttgcaaac tattgtgtat catagcaaga aaatcaatgc gctttttggt 4080 cctgtatttt cagaattaac aagacagctg ctagagacaa ttgacagttc aagattcatg 4140 ttttatacaa ggaaaacgcc tacacagatc gaagaatttt tctcagatct ggactctaat 4200 gttcctatgg acatattaga gctagacatt tccaagtatg acaaatcaca gaacgaattt 4260 cattgtgcag tcgagtatga gatttggaaa aggttaggct tagacgattt cttggctgaa 4320 gtttggaaac acgggcatcg gaagacaacg ttgaaagact acacagccgg aataaaaacg 4380 tgtttgtggt accagaggaa aagcggtgat gtcaccacat tcattggaaa cacgatcatt 4440 attgctgcat gtctgtcctc tatgctaccg atggagagat tgattaaagg tgccttttgt 4500 ggtgatgata gtatattata ctttccaaag ggcactgatt tccccgatat tcaacagggc 4560 gcaaaccttc tctggaattt tgaagccaag ttgtttagga agagatatgg ttacttttgc 4620 ggtaggtaca taattcacca tgacagaggc tgtattgtat attatgaccc tctaaaattg 4680 atctcgaaac tcggtgcaaa acacatcaag aatagagaac atttagagga atttaggacc 4740 tctctttgtg atgttgctgg gtcgttgaac aattgtgcgt actatacaca tttggacgac 4800 gctgtcggtg aggttattaa gaccgcacct cctggttcgt ttgtttatag agcattagtt 4860 aagtacttgt gtgataaaag gttatttcaa acattgtttt tggagtaaat ggcgttagta 4920 gtcaaggacg acgttaagat ttctgagttc atcaatttgt ctgccgctga gaaattctta 4980 cctgctgtta tgacttcggt caagacggta cgaatttcga aagttgacaa agtgattgca 5040 atggaaaacg attcgttatc cgatgtggat ttgcttaaag gtgtaaagct tgttaaggat 5100 ggttatgtgt gtttagcagg gttagttgtg tccggggagt ggaacctacc cgacaactgc 5160 agaggtggag taagcgtttg tttggttgat aagagaatgc aaagagatga cgaagcaaca 5220 cttggatctt atagaaccag tgcagctaag aaacgatttg ccttcaaatt gatcccgaat 5280 tatagcatta ctaccgccga tgctgagaga aaagtttggc aagttttagt taatattaga 5340 ggtgttgcca tggaaaaggg tttctgtcct ttatctttgg agtttgtctc agtttgtatt 5400 gtacacaaat ccaatataaa attaggcttg agagagaaaa ttactagtgt gtcagaagga 5460 ggacccgttg aacttacaga agcagtcgtt gatgagttca tcgaatcagt tccaatggct 5520 gacagattac gtaaatttcg caatcaatct aagaaaggaa gtaataagta tgtaggtaag 5580 agaaatgata ataagggttt gaataaggaa gggaagctgt ttgataaggt tagaattggg 5640 cagaactcgg agtcatcgga cgccgagtct tcttcgtttt aactatggct tacacagttt 5700 ccagtgccaa tcaattagtg tatttaggtt ctgtatgggc tgatccatta gagttacaaa 5760 atctgtgtac ttcggcgtta ggcaatcagt ttcaaacaca acaggctaga actacggttc 5820 aacagcagtt ctctgatgtg tggaagacta ttccgaccgc tacagttaga tttcctgcta 5880 ctggtttcaa agttttccga tataatgccg tgctagattc tctagtgtcg gcacttctcg 5940 gagcctttga tactaggaac aggataatag aagttgaaaa tccgcaaaat cctacaactg 6000 ccgagacgct tgatgcgacg aggcgggtag atgatgcgac ggtggccatt agggccagta 6060 taagtaacct catgaatgag ttagttcgtg gcacgggaat gtacaatcaa gctctgttcg 6120 agagcgcgag tggactcacc tgggctacaa ctccttaaac atgatggcat aaataagttg 6180 gacgaacatt aaacgtccgt ggcgagtacg ataactcgta gtgtttttcc ctccacttaa 6240 atcgaagggt tgtcgttggg atggaacgca attaaataca tgtgtgacgt gtatttgcga 6300 acgacgtaat tatttttcag gggttcgaat cccccccgaa ccgcgggtag cggccca 6357 // ID AB000720; SV 1; linear; genomic RNA; STD; VRL; 1136 BP. XX AC AB000720; XX DT 15-MAR-1999 (Rel. 59, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 5) XX DE Influenza C virus (C/Mississippi/80) M gene for M1 protein and CM2 protein, DE complete cds. XX KW . XX OS Influenza C virus (C/Mississippi/80) OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Gammainfluenzavirus. XX RN [1] RP 1-1136 RA Tada Y.; RT ; RL Submitted (27-JAN-1997) to the INSDC. RL Contact:Yuichiro Tada Yamagata University School of Medicine, Department of RL Bacteriology; Iida-nishi 2-2-2, Yamagata, Yamagata 990-9585, Japan XX RN [2] RX DOI; 10.1023/A:1007915215958. RX PUBMED; 9354270. RA Tada Y., Hongo S., Muraki Y., Sugawara K., Kitame F., Nakamura K.; RT "Evolutionary analysis of influenza C virus M genes"; RL Virus Genes 15(1):53-59(1997). XX DR MD5; c1a411e1199117a5ad75b82f6d711638. DR EuropePMC; PMC4634283; 23445084. DR EuropePMC; PMC6154146; 30226175. XX FH Key Location/Qualifiers FH FT source 1..1136 FT /organism="Influenza C virus (C/Mississippi/80)" FT /segment="6" FT /host="Homo sapiens" FT /isolate="C/Mississippi/80" FT /mol_type="genomic RNA" FT /db_xref="taxon:203229" FT CDS 4..1128 FT /codon_start=1 FT /gene="M" FT /db_xref="GOA:Q9YMB5" FT /db_xref="InterPro:IPR004267" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q9YMB5" FT /protein_id="BAA75857.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVIRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMKWLVVIIYFSITSQPASACNLKTCLKLFNNTDAVTVHCFN FT ENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSMEK FT DIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" FT CDS join(4..731,960) FT /codon_start=1 FT /gene="M" FT /product="M1 protein" FT /note="matrix protein" FT /db_xref="GOA:Q9WAE1" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q9WAE1" FT /protein_id="BAA75858.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVIRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMK" FT CDS 709..1128 FT /codon_start=1 FT /gene="M" FT /product="CM2 protein" FT /note="integral membrane protein" FT /db_xref="GOA:Q788I0" FT /db_xref="InterPro:IPR004267" FT /db_xref="UniProtKB/TrEMBL:Q788I0" FT /protein_id="BAA75859.1" FT /translation="MGRMAMKWLVVIIYFSITSQPASACNLKTCLKLFNNTDAVTVHCF FT NENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSME FT KDIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" XX SQ Sequence 1136 BP; 422 A; 191 C; 242 G; 281 T; 0 other; acaatggcac atgaaatatt gattgctgaa acagaggcat ttctaaaaaa tgttgctcct 60 gagaccagga cagcaataat ttcagcaata acaggaggga aatcagcctg caaatcagca 120 gctaaactga ttaagaatga acatcttccc ctaatgtctg gagaagccac cacaatgcac 180 atcgttataa ggtgcttata tcctgaaata aaaccatgga aaaaggcaag cgacatgctg 240 aataaagcaa cttctagttt gaaaaaatca gaaggaagag acatcagaaa gcaaatgaaa 300 gcagctggag acttcttagg agtggagtca atgatgaaaa tgagggcctt tagagatgac 360 caaataatgg aaatggttga agaagtatat gatcacccag acgactacac accagacatc 420 cgaataggaa caatcacagc ttggttgaga tgcaaaaaca agaaaagtga aagatacagg 480 agtaatgtct cagaaagtgg aagaacagct ttaaagattc atgaagtaag aaaagccagc 540 acagcaatga acgaaattgc tggtattact ggccttggag aagaagcact atctctccaa 600 agacaaacag aaagtttggc catattatgt aatcacactt ttggaagtaa tataatgaga 660 ccccacttgg aaaaagcaat aaaaggagtt gaaggcagag ttggagagat gggacgaatg 720 gcaatgaaat ggttagttgt tataatatat ttctctataa caagtcaacc tgcttctgct 780 tgcaatctaa aaacctgtct aaaactattt aacaatactg atgcagtaac tgttcattgt 840 tttaatgaaa accaaggata catgctaaca ttagcctctt taggactagg gataattact 900 atgttgtatt tattagtaaa aatcataatt gaacttgtca atggttttgt gctcggcaga 960 tgggagagat ggtgtggaga tataaagacc acaattatgc ctgaaattga ctcgatggaa 1020 aaagatattg ccctctctag ggagagactt gacctgggag aggatgcccc tgacgaaacc 1080 gacaactcac caattccttt ttccaatgat ggtatttttg aaatttaatt accttg 1136 // ID AB000721; SV 1; linear; genomic RNA; STD; VRL; 1137 BP. XX AC AB000721; XX DT 15-MAR-1999 (Rel. 59, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 6) XX DE Influenza C virus (C/Yamagata/26/81) M gene for M1 protein and CM2 protein, DE complete cds. XX KW . XX OS Influenza C virus (C/Yamagata/26/81) OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Gammainfluenzavirus. XX RN [1] RP 1-1137 RA Tada Y.; RT ; RL Submitted (27-JAN-1997) to the INSDC. RL Contact:Yuichiro Tada Yamagata University School of Medicine, Department of RL Bacteriology; Iida-nishi 2-2-2, Yamagata, Yamagata 990-9585, Japan XX RN [2] RX DOI; 10.1023/A:1007915215958. RX PUBMED; 9354270. RA Tada Y., Hongo S., Muraki Y., Sugawara K., Kitame F., Nakamura K.; RT "Evolutionary analysis of influenza C virus M genes"; RL Virus Genes 15(1):53-59(1997). XX DR MD5; e40681a18e745096a7bac0f6f8a45fa3. DR EuropePMC; PMC4634283; 23445084. XX FH Key Location/Qualifiers FH FT source 1..1137 FT /organism="Influenza C virus (C/Yamagata/26/81)" FT /segment="6" FT /host="Homo sapiens" FT /isolate="C/Yamagata/26/81" FT /mol_type="genomic RNA" FT /db_xref="taxon:203230" FT CDS 5..1129 FT /codon_start=1 FT /gene="M" FT /db_xref="GOA:Q788H9" FT /db_xref="InterPro:IPR004267" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788H9" FT /protein_id="BAA75860.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMKWLVVIIYFSITSQPASACNLKTCLNLFNNTDAVTVHCFN FT ENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSMEK FT DIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" FT CDS join(5..732,961) FT /codon_start=1 FT /gene="M" FT /product="M1 protein" FT /note="matrix protein" FT /db_xref="GOA:Q788H8" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788H8" FT /protein_id="BAA75861.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMK" FT CDS 710..1129 FT /codon_start=1 FT /gene="M" FT /product="CM2 protein" FT /note="integral membrane protein" FT /db_xref="GOA:Q788H7" FT /db_xref="InterPro:IPR004267" FT /db_xref="UniProtKB/TrEMBL:Q788H7" FT /protein_id="BAA75862.1" FT /translation="MGRMAMKWLVVIIYFSITSQPASACNLKTCLNLFNNTDAVTVHCF FT NENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSME FT KDIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" XX SQ Sequence 1137 BP; 418 A; 188 C; 245 G; 286 T; 0 other; aacaatggca catgaaatat tgattgctga aacagaggca tttctaaaaa atgttgctcc 60 tgagaccagg acagcaataa tttcagcaat aacaggtggg aaatcagcct gcaaatcagc 120 agctaaactg atcaagaatg aacatcttcc cttaatgtct ggagaagcca ccacaatgca 180 cattgttatg aggtgcttat atcctgaaat aaaaccatgg aaaaaggcaa gcgacatgct 240 gaataaagca acttctagtt tgaaaaaatc agaaggaaga gacatcagaa agcaaatgaa 300 agcagctgga gactttttgg gagtggagtc aatgatgaaa atgagggcct tcagagatga 360 ccaaataatg gaaatggttg aagaagtata tgatcatcca gacgactaca caccagacat 420 ccgaatagga acaatcacag cttggttgag atgcaaaaac aagaaaagtg aaagatacag 480 gagtaatgtc tcagaaagtg gaagaacagc tttaaaaatt catgaagtaa gaaaagccag 540 cacagcaatg aacgaaattg ctggtattac tggccttgga gaagaagcac tatctctcca 600 aagacaaaca gaaagtttgg ccatattatg caatcacact tttggaagta atataatgag 660 accccacttg gaaaaagcaa taaaaggagt tgaaggcaga gttggagaga tgggacgaat 720 ggcaatgaaa tggttagttg ttataatata tttctctata acaagtcaac ctgcttctgc 780 ttgcaatcta aagacctgtc taaacctatt taacaatact gatgcagtaa ctgttcattg 840 ttttaatgaa aaccaaggat atatgctaac attagcctct ttgggattag ggataattac 900 tatgttgtat ttattagtaa aaattataat tgaacttgtc aatggttttg tgctcggcag 960 atgggagaga tggtgtggag atataaagac cacaattatg cctgaaattg actcgatgga 1020 aaaagatatt gccctctcta gggagagact tgacctggga gaggatgccc ctgacgaaac 1080 cgacaactca ccaattcctt tttccaatga tggtattttt gaaatttaat taccttg 1137 // ID AB000722; SV 1; linear; genomic RNA; STD; VRL; 1136 BP. XX AC AB000722; XX DT 15-MAR-1999 (Rel. 59, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 6) XX DE Influenza C virus (C/pig/Beijing/115/81) M gene for M1 protein and CM2 DE protein, complete cds. XX KW . XX OS Influenza C virus (C/pig/Beijing/115/81) OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Gammainfluenzavirus. XX RN [1] RP 1-1136 RA Tada Y.; RT ; RL Submitted (27-JAN-1997) to the INSDC. RL Contact:Yuichiro Tada Yamagata University School of Medicine, Department of RL Bacteriology; Iida-nishi 2-2-2, Yamagata, Yamagata 990-9585, Japan XX RN [2] RX DOI; 10.1023/A:1007915215958. RX PUBMED; 9354270. RA Tada Y., Hongo S., Muraki Y., Sugawara K., Kitame F., Nakamura K.; RT "Evolutionary analysis of influenza C virus M genes"; RL Virus Genes 15(1):53-59(1997). XX DR MD5; ff75f872dc33da947961b24a7c77f0fc. DR EuropePMC; PMC4634283; 23445084. XX FH Key Location/Qualifiers FH FT source 1..1136 FT /organism="Influenza C virus (C/pig/Beijing/115/81)" FT /segment="6" FT /host="Homo sapiens" FT /isolate="C/pig/Beijing/115/81" FT /mol_type="genomic RNA" FT /db_xref="taxon:203231" FT CDS 4..1128 FT /codon_start=1 FT /gene="M" FT /db_xref="GOA:Q788H6" FT /db_xref="InterPro:IPR004267" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788H6" FT /protein_id="BAA75863.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMKWLVVIIYFSITSQPASACNLKTCLNLFNNTDAVTVHCFN FT ENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSMEK FT DIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" FT CDS join(4..731,960) FT /codon_start=1 FT /gene="M" FT /product="M1 protein" FT /note="matrix protein" FT /db_xref="GOA:Q788H5" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788H5" FT /protein_id="BAA75864.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMK" FT CDS 709..1128 FT /codon_start=1 FT /gene="M" FT /product="CM2 protein" FT /note="integral membrane protein" FT /db_xref="GOA:Q788H4" FT /db_xref="InterPro:IPR004267" FT /db_xref="UniProtKB/TrEMBL:Q788H4" FT /protein_id="BAA75865.1" FT /translation="MGRMAMKWLVVIIYFSITSQPASACNLKTCLNLFNNTDAVTVHCF FT NENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSME FT KDIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" XX SQ Sequence 1136 BP; 419 A; 191 C; 243 G; 283 T; 0 other; acaatggcac atgaaatatt gattgctgaa acagaagcat ttctaaaaaa tgttgctcct 60 gagaccagga cagcaataat ttcagcaata acaggtggaa aatcagcctg caaatcagca 120 gctaaactga tcaagaatga acatcttccc ttaatgtctg gagaagccac cacaatgcac 180 attgttatga ggtgcctata tcctgaaata aaaccatgga aaaaggcaag cgacatgctg 240 aataaagcaa cttctagttt gaaaaaatca gaaggaagag acatcagaaa gcaaatgaaa 300 gcagctggag actttttggg agtggagtca atgatgaaaa tgagggcctt cagagatgac 360 caaataatgg aaatggttga agaagtatat gatcacccag acgactacac accagacatc 420 cgaataggaa caatcacagc ttggttgaga tgcaaaaaca agaaaagtga aagatacagg 480 agtaatgtct cagaaagtgg aagaacagct ttaaaaattc atgaagtaag aaaagccagc 540 acagcaatga acgaaattgc tggtattact ggccttggag aagaagcact atctctccaa 600 agacaaacag aaagtttggc catattatgc aatcatactt ttggaagtaa tataatgaga 660 ccccacttgg aaaaagcaat aaaaggagtt gaaggcagag ttggagagat gggacgaatg 720 gcaatgaaat ggttagttgt tataatatat ttctctataa caagtcaacc tgcttctgct 780 tgcaatctaa agacctgtct aaacctattt aacaatactg atgcagtaac tgttcattgt 840 tttaatgaaa accaaggata catgctaaca ttagcctctt tgggattagg gataattact 900 atgttgtatt tattagtaaa aatcataatt gaacttgtca atggttttgt gctcggcaga 960 tgggagagat ggtgtggaga tataaagacc acaattatgc ctgaaattga ctcgatggaa 1020 aaagatattg ccctctctag ggagagactt gacctgggag aggatgcccc tgacgaaacc 1080 gacaactcac caattccttt ttccaatgat ggtatttttg aaatttaatt accttg 1136 // ID AB000723; SV 1; linear; genomic RNA; STD; VRL; 1136 BP. XX AC AB000723; XX DT 15-MAR-1999 (Rel. 59, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 5) XX DE Influenza C virus (C/Nara/82) M gene for M1 protein and CM2 protein, DE complete cds. XX KW . XX OS Influenza C virus (C/Nara/82) OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Gammainfluenzavirus. XX RN [1] RP 1-1136 RA Tada Y.; RT ; RL Submitted (27-JAN-1997) to the INSDC. RL Contact:Yuichiro Tada Yamagata University School of Medicine, Department of RL Bacteriology; Iida-nishi 2-2-2, Yamagata, Yamagata 990-9585, Japan XX RN [2] RX DOI; 10.1023/A:1007915215958. RX PUBMED; 9354270. RA Tada Y., Hongo S., Muraki Y., Sugawara K., Kitame F., Nakamura K.; RT "Evolutionary analysis of influenza C virus M genes"; RL Virus Genes 15(1):53-59(1997). XX DR MD5; 093a820b15c08c7d99489c28bd588e77. DR EuropePMC; PMC6154146; 30226175. XX FH Key Location/Qualifiers FH FT source 1..1136 FT /organism="Influenza C virus (C/Nara/82)" FT /segment="6" FT /host="Homo sapiens" FT /isolate="C/Nara/82" FT /mol_type="genomic RNA" FT /db_xref="taxon:203232" FT CDS 4..1128 FT /codon_start=1 FT /gene="M" FT /db_xref="GOA:Q788H3" FT /db_xref="InterPro:IPR004267" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788H3" FT /protein_id="BAA75866.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMKWLVVIIYFSITSQPASACNLKTCLKLFNNTDAVTVHCFN FT ENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSMEK FT DIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" FT CDS join(4..731,960) FT /codon_start=1 FT /gene="M" FT /product="M1 protein" FT /note="matrix protein" FT /db_xref="GOA:Q788H2" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788H2" FT /protein_id="BAA75867.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMK" FT CDS 709..1128 FT /codon_start=1 FT /gene="M" FT /product="CM2 protein" FT /note="integral membrane protein" FT /db_xref="GOA:Q788H1" FT /db_xref="InterPro:IPR004267" FT /db_xref="UniProtKB/TrEMBL:Q788H1" FT /protein_id="BAA75868.1" FT /translation="MGRMAMKWLVVIIYFSITSQPASACNLKTCLKLFNNTDAVTVHCF FT NENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSME FT KDIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" XX SQ Sequence 1136 BP; 421 A; 189 C; 243 G; 283 T; 0 other; acaatggcac atgaaatatt gattgctgaa acagaggcat ttctaaaaaa tgttgctcct 60 gagaccagga cagcaataat ttcagcaata acaggaggga aatcagcctg caaatcagca 120 gctaaactga ttaagaatga acatcttccc ctaatgtctg gagaagccac cacaatgcac 180 atcgttatga ggtgcttata tcctgaaata aaaccatgga aaaaggcaag cgacatgctg 240 aataaagcaa cttctagttt gaaaaaatca gaaggaagag acatcagaaa gcaaatgaaa 300 gcagctggag acttcttagg agtggagtca atgatgaaaa tgagggcctt tagagatgat 360 caaataatgg aaatggttga agaagtatat gatcacccag acgactatac accagacatc 420 cgaataggaa caatcacagc ttggttgaga tgcaaaaaca agaaaagtga aagatacagg 480 agtaatgtct cagaaagtgg aagaacagct ttaaagattc atgaagtaag aaaagccagc 540 acagcaatga acgaaattgc tggtattact ggccttggag aagaagcact atctctccaa 600 agacaaacag aaagtttggc catattatgt aatcacactt ttggaagtaa tataatgaga 660 ccccacttgg aaaaagcaat aaaaggagtt gaaggcagag ttggagagat gggacgaatg 720 gcaatgaaat ggttagttgt tataatatat ttctctataa caagtcaacc tgcttctgct 780 tgcaatctaa aaacctgtct aaaactattt aacaatactg atgcagtaac tgttcattgt 840 tttaatgaaa accaaggata catgctaaca ttagcctctt taggactagg gataattact 900 atgttgtatt tattagtaaa aatcataatt gaacttgtca atggttttgt gctcggcaga 960 tgggagagat ggtgtggaga tataaagacc acaattatgc ctgaaattga ctcgatggaa 1020 aaagatattg ccctctctag ggagagactt gacctgggag aggatgcccc tgacgaaacc 1080 gacaactcac caattccttt ttccaatgat ggtatttttg aaatttaatt accttg 1136 // ID AB000724; SV 1; linear; genomic RNA; STD; VRL; 1136 BP. XX AC AB000724; XX DT 15-MAR-1999 (Rel. 59, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 5) XX DE Influenza C virus (C/Kyoto/41/82) M gene for M1 protein and CM2 protein, DE complete cds. XX KW . XX OS Influenza C virus (C/Kyoto/41/82) OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Gammainfluenzavirus. XX RN [1] RP 1-1136 RA Tada Y.; RT ; RL Submitted (27-JAN-1997) to the INSDC. RL Contact:Yuichiro Tada Yamagata University School of Medicine, Department of RL Bacteriology; Iida-nishi 2-2-2, Yamagata, Yamagata 990-9585, Japan XX RN [2] RX DOI; 10.1023/A:1007915215958. RX PUBMED; 9354270. RA Tada Y., Hongo S., Muraki Y., Sugawara K., Kitame F., Nakamura K.; RT "Evolutionary analysis of influenza C virus M genes"; RL Virus Genes 15(1):53-59(1997). XX DR MD5; 6740f623037e11c0036e4198c552f862. DR EuropePMC; PMC6154146; 30226175. XX FH Key Location/Qualifiers FH FT source 1..1136 FT /organism="Influenza C virus (C/Kyoto/41/82)" FT /segment="6" FT /host="Homo sapiens" FT /isolate="C/Kyoto/41/82" FT /mol_type="genomic RNA" FT /db_xref="taxon:203233" FT CDS 4..1128 FT /codon_start=1 FT /gene="M" FT /db_xref="GOA:Q9W8X9" FT /db_xref="InterPro:IPR004267" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q9W8X9" FT /protein_id="BAA75869.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMKWLVVIIYFSITSQPASACNLKTCLKLFNNTDAVTVHCFN FT ENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSMEK FT DIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" FT CDS join(4..731,960) FT /codon_start=1 FT /gene="M" FT /product="M1 protein" FT /note="matrix protein" FT /db_xref="GOA:Q788H0" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788H0" FT /protein_id="BAA75870.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMK" FT CDS 709..1128 FT /codon_start=1 FT /gene="M" FT /product="CM2 protein" FT /note="integral membrane protein" FT /db_xref="GOA:Q9W8L5" FT /db_xref="InterPro:IPR004267" FT /db_xref="UniProtKB/TrEMBL:Q9W8L5" FT /protein_id="BAA75871.1" FT /translation="MGRMAMKWLVVIIYFSITSQPASACNLKTCLKLFNNTDAVTVHCF FT NENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSME FT KDIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" XX SQ Sequence 1136 BP; 421 A; 190 C; 243 G; 282 T; 0 other; acaatggcac atgaaatatt gattgctgaa acagaggcat ttctaaaaaa tgttgctcct 60 gagaccagga cagcaataat ttcagcaata acaggaggga aatcagcctg caaatcagca 120 gctaaactga ttaagaatga acatcttccc ctaatgtctg gagaagccac cacaatgcac 180 atcgtcatga ggtgcttata tcctgaaata aaaccatgga aaaaggcaag cgacatgctg 240 aataaagcaa cttctagttt gaaaaaatca gaaggaagag acatcagaaa gcaaatgaaa 300 gcagctggag acttcttagg agtggagtca atgatgaaaa tgagggcctt tagagatgat 360 caaataatgg aaatggttga agaagtatat gatcacccag acgactatac accagacatc 420 cgaataggaa caatcacagc ttggttgaga tgcaaaaaca agaaaagtga aagatacagg 480 agtaatgtct cagaaagtgg aagaacagct ttaaagattc atgaagtaag aaaagccagc 540 acagcaatga acgaaattgc tggtattact ggccttggag aagaagcact atctctccaa 600 agacaaacag aaagtttggc catattatgt aatcacactt ttggaagtaa tataatgaga 660 ccccacttgg aaaaagcaat aaaaggagtt gaaggcagag ttggagagat gggacgaatg 720 gcaatgaaat ggttagttgt tataatatat ttctctataa caagtcaacc tgcttctgct 780 tgcaatctaa aaacctgtct aaaactattt aacaatactg atgcagtaac tgttcattgt 840 tttaatgaaa accaaggata catgctaaca ttagcctctt taggactagg gataattact 900 atgttgtatt tattagtaaa aatcataatt gaacttgtca atggttttgt gctcggcaga 960 tgggagagat ggtgtggaga tataaagacc acaattatgc ctgaaattga ctcgatggaa 1020 aaagatattg ccctctctag ggagagactt gacctgggag aggatgcccc tgacgaaacc 1080 gacaactcac caattccttt ttccaatgat ggtatttttg aaatttaatt accttg 1136 // ID AB000725; SV 1; linear; genomic RNA; STD; VRL; 1136 BP. XX AC AB000725; XX DT 15-MAR-1999 (Rel. 59, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 7) XX DE Influenza C virus (C/England/83) M gene for M1 protein and CM2 protein, DE complete cds. XX KW . XX OS Influenza C virus (C/England/83) OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Gammainfluenzavirus. XX RN [1] RP 1-1136 RA Tada Y.; RT ; RL Submitted (27-JAN-1997) to the INSDC. RL Contact:Yuichiro Tada Yamagata University School of Medicine, Department of RL Bacteriology; Iida-nishi 2-2-2, Yamagata, Yamagata 990-9585, Japan XX RN [2] RX DOI; 10.1023/A:1007915215958. RX PUBMED; 9354270. RA Tada Y., Hongo S., Muraki Y., Sugawara K., Kitame F., Nakamura K.; RT "Evolutionary analysis of influenza C virus M genes"; RL Virus Genes 15(1):53-59(1997). XX DR MD5; ae69b452d84c0e20524dbbb9472d104d. DR EuropePMC; PMC4634283; 23445084. XX FH Key Location/Qualifiers FH FT source 1..1136 FT /organism="Influenza C virus (C/England/83)" FT /segment="6" FT /host="Homo sapiens" FT /isolate="C/England/83" FT /mol_type="genomic RNA" FT /db_xref="taxon:203234" FT CDS 4..1128 FT /codon_start=1 FT /gene="M" FT /db_xref="GOA:Q788G9" FT /db_xref="InterPro:IPR004267" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788G9" FT /protein_id="BAA75872.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMKWLVVIIYFSITSQPASACNLKTCLNLFNNTDAVTVHCFN FT ENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSMEK FT DIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" FT CDS join(4..731,960) FT /codon_start=1 FT /gene="M" FT /product="M1 protein" FT /note="matrix protein" FT /db_xref="GOA:Q788G8" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788G8" FT /protein_id="BAA75873.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMK" FT CDS 709..1128 FT /codon_start=1 FT /gene="M" FT /product="CM2 protein" FT /note="integral membrane protein" FT /db_xref="GOA:Q788G7" FT /db_xref="InterPro:IPR004267" FT /db_xref="UniProtKB/TrEMBL:Q788G7" FT /protein_id="BAA75874.1" FT /translation="MGRMAMKWLVVIIYFSITSQPASACNLKTCLNLFNNTDAVTVHCF FT NENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSME FT KDIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" XX SQ Sequence 1136 BP; 418 A; 191 C; 244 G; 283 T; 0 other; acaatggcac atgaaatatt gattgctgaa acagaggcat ttctaaaaaa tgttgctcct 60 gagaccagga cagcaataat ttcagcaata acaggtggaa aatcagcctg caaatcagca 120 gctaaactga tcaagaatga acatcttccc ttaatgtctg gagaagccac cacaatgcac 180 attgttatga ggtgcctata tcctgaaata aaaccatgga aaaaggcaag cgacatgctg 240 aataaagcaa cttctagttt gaaaaaatca gaaggaagag acatcagaaa gcaaatgaaa 300 gcagctggag actttttggg agtggagtca atgatgaaaa tgagggcctt cagagatgac 360 caaataatgg aaatggttga agaagtatat gatcacccag acgactacac accagacatc 420 cgaataggaa caatcacagc ttggttgaga tgcaaaaata agaaaagtga aagatacagg 480 agtaatgtct cagaaagtgg aagaacagct ttaaaaattc atgaagtaag aaaagccagc 540 acagcaatga acgaaattgc tggtattact ggccttggag aagaagcact atctctccaa 600 agacaaacag aaagtttggc catattatgc aatcacactt ttggaagtaa tataatgaga 660 ccccacttgg aaaaagcaat aaaaggagtt gaaggcagag ttggagagat gggacgaatg 720 gcaatgaaat ggttagttgt tataatatat ttctctataa caagtcaacc tgcttctgct 780 tgcaatctaa agacctgtct aaacctattt aacaatactg atgcagtaac tgttcattgt 840 tttaatgaaa accaaggata catgctaaca ttagcctctt tgggattagg gataattact 900 atgttgtatt tattagtaaa aatcataatt gaacttgtca atggttttgt gctcggcaga 960 tgggagagat ggtgtggaga tataaagacc acaattatgc ctgaaattga ctcgatggaa 1020 aaagatattg ccctctctag ggagagactt gacctgggag aggatgcccc tgacgaaacc 1080 gacaactcac caattccttt ttccaatgat ggtatttttg aaatttaatt accttg 1136 // ID AB000726; SV 1; linear; genomic RNA; STD; VRL; 1137 BP. XX AC AB000726; XX DT 15-MAR-1999 (Rel. 59, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 5) XX DE Influenza C virus (C/Nara/1/85) M gene for M1 protein and CM2 protein, DE complete cds. XX KW . XX OS Influenza C virus (C/Nara/1/85) OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Gammainfluenzavirus. XX RN [1] RP 1-1137 RA Tada Y.; RT ; RL Submitted (27-JAN-1997) to the INSDC. RL Contact:Yuichiro Tada Yamagata University School of Medicine, Department of RL Bacteriology; Iida-nishi 2-2-2, Yamagata, Yamagata 990-9585, Japan XX RN [2] RX DOI; 10.1023/A:1007915215958. RX PUBMED; 9354270. RA Tada Y., Hongo S., Muraki Y., Sugawara K., Kitame F., Nakamura K.; RT "Evolutionary analysis of influenza C virus M genes"; RL Virus Genes 15(1):53-59(1997). XX DR MD5; d88b7397723beacad8ab6e6d17f63afa. XX FH Key Location/Qualifiers FH FT source 1..1137 FT /organism="Influenza C virus (C/Nara/1/85)" FT /segment="6" FT /host="Homo sapiens" FT /isolate="C/Nara/1/85" FT /mol_type="genomic RNA" FT /db_xref="taxon:224197" FT CDS 5..1129 FT /codon_start=1 FT /gene="M" FT /db_xref="GOA:Q9WAE2" FT /db_xref="InterPro:IPR004267" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q9WAE2" FT /protein_id="BAA75875.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMKWLVVIIYFSITSQPASACNLKTCLNLFNNTEAVTVHCFN FT ENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSMEK FT DIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" FT CDS join(5..732,961) FT /codon_start=1 FT /gene="M" FT /product="M1 protein" FT /note="matrix protein" FT /db_xref="GOA:Q788G6" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788G6" FT /protein_id="BAA75876.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMK" FT CDS 710..1129 FT /codon_start=1 FT /gene="M" FT /product="CM2 protein" FT /note="integral membrane protein" FT /db_xref="GOA:Q9WAE3" FT /db_xref="InterPro:IPR004267" FT /db_xref="UniProtKB/TrEMBL:Q9WAE3" FT /protein_id="BAA75877.1" FT /translation="MGRMAMKWLVVIIYFSITSQPASACNLKTCLNLFNNTEAVTVHCF FT NENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSME FT KDIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" XX SQ Sequence 1137 BP; 420 A; 189 C; 245 G; 283 T; 0 other; aacaatggca catgaaatat tgattgctga aacagaggca tttctaaaaa atgttgctcc 60 tgagaccagg acagcaataa tttcagcaat aacaggtgga aagtcagcct gcaaatcagc 120 agctaaactg atcaagaatg aacatcttcc cttaatgtct ggagaagcca ccacaatgca 180 cattgttatg aggtgcttat atcctgaaat aaaaccatgg aaaaaggcaa gcgacatgct 240 gaataaagca acttctagtt tgaaaaaatc agaaggaaga gacatcagaa agcaaatgaa 300 agcagctgga gactttttgg gagtggaatc aatgatgaaa atgagggcct tcagagatga 360 ccaaataatg gaaatggttg aagaagtata tgatcatcca gacgactaca caccagacat 420 cagaatagga acaatcacag cttggttgag atgcaaaaac aagaaaagtg aaagatacag 480 gagtaatgtc tcagaaagtg ggagaacagc tttaaaaatt catgaagtaa gaaaagccag 540 cacagcaatg aacgaaattg ctggtattac tggccttgga gaagaagcac tatctctcca 600 aagacaaaca gaaagtttgg ccatattatg caatcacact tttggaagta atataatgag 660 accccacttg gaaaaagcaa taaaaggagt tgaaggcaga gttggagaga tgggacgaat 720 ggcaatgaaa tggttagttg ttataatata tttctctata acaagtcaac ctgcttctgc 780 ttgcaatcta aagacctgtc taaacctatt taacaatact gaagcagtaa ctgttcattg 840 ttttaatgaa aaccaaggat acatgctaac attagcctct ttgggattag ggataattac 900 tatgttgtat ttattagtaa aaatcataat tgaacttgtc aatggttttg tgctcggcag 960 atgggagaga tggtgtggag atataaagac cacaattatg cctgaaattg actcgatgga 1020 aaaagatatt gccctctcta gggagagact tgacctggga gaggatgccc ctgacgaaac 1080 cgacaactca ccaattcctt tttccaatga tggtattttt gaaatttaat taccttg 1137 // ID AB000727; SV 1; linear; genomic RNA; STD; VRL; 1137 BP. XX AC AB000727; XX DT 15-MAR-1999 (Rel. 59, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 6) XX DE Influenza C virus (C/Nara/2/85) M gene for M1 protein and CM2 protein, DE complete cds. XX KW . XX OS Influenza C virus (C/Nara/2/85) OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Gammainfluenzavirus. XX RN [1] RP 1-1137 RA Tada Y.; RT ; RL Submitted (27-JAN-1997) to the INSDC. RL Contact:Yuichiro Tada Yamagata University School of Medicine, Department of RL Bacteriology; Iida-nishi 2-2-2, Yamagata, Yamagata 990-9585, Japan XX RN [2] RX DOI; 10.1023/A:1007915215958. RX PUBMED; 9354270. RA Tada Y., Hongo S., Muraki Y., Sugawara K., Kitame F., Nakamura K.; RT "Evolutionary analysis of influenza C virus M genes"; RL Virus Genes 15(1):53-59(1997). XX DR MD5; deeaea19016d49ab90bf9b1decd39d97. XX FH Key Location/Qualifiers FH FT source 1..1137 FT /organism="Influenza C virus (C/Nara/2/85)" FT /segment="6" FT /host="Homo sapiens" FT /isolate="C/Nara/2/85" FT /mol_type="genomic RNA" FT /db_xref="taxon:127957" FT CDS 5..1129 FT /codon_start=1 FT /gene="M" FT /db_xref="GOA:Q9W841" FT /db_xref="InterPro:IPR004267" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q9W841" FT /protein_id="BAA75878.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMKWLVVIIYFSITSQPASACNLKTCLNLFNNTDAVTVHCFN FT ENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSMEK FT DIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" FT CDS join(5..732,961) FT /codon_start=1 FT /gene="M" FT /product="M1 protein" FT /note="matrix protein" FT /db_xref="GOA:Q788G5" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788G5" FT /protein_id="BAA75879.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT ESGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMK" FT CDS 710..1129 FT /codon_start=1 FT /gene="M" FT /product="CM2 protein" FT /note="integral membrane protein" FT /db_xref="GOA:Q9W8T3" FT /db_xref="InterPro:IPR004267" FT /db_xref="UniProtKB/TrEMBL:Q9W8T3" FT /protein_id="BAA75880.1" FT /translation="MGRMAMKWLVVIIYFSITSQPASACNLKTCLNLFNNTDAVTVHCF FT NENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSME FT KDIALSRERLDLGEDAPDETDNSPIPFSNDGIFEI" XX SQ Sequence 1137 BP; 420 A; 191 C; 243 G; 283 T; 0 other; aacaatggca catgaaatat taattgccga aacagaggca tttctaaaaa atgttgctcc 60 tgagaccagg acagcaataa tttcagcaat aacaggtgga aaatcagcct gcaaatcagc 120 agctaaactg attaagaatg aacatcttcc cttaatgtct ggagaagcca ccacaatgca 180 cattgttatg aggtgcttat atcctgaaat aaaaccatgg aaaaaggcaa gcgacatgct 240 gaataaagca acttctagtt tgaaaaaatc agaaggaaga gacatcagaa agcaaatgaa 300 agcagctgga gactttttgg gagtggagtc aatgatgaaa atgagggcct tcagagatga 360 ccaaataatg gaaatggttg aagaagtata tgatcatcca gacgactaca caccagacat 420 ccgaatagga acaatcacag cttggttgag atgcaaaaac aagaaaagtg aaagatacag 480 gagcaatgtc tcagaaagtg gaagaacagc tttaaaaatt catgaagtaa gaaaagccag 540 cacagcaatg aacgaaattg ctggtattac tggccttgga gaagaagcac tatctctcca 600 aagacaaaca gaaagtttgg ccatattatg caatcacact tttggaagta atataatgag 660 accccacttg gaaaaagcaa taaaaggagt tgaaggcaga gttggagaga tgggacgaat 720 ggcaatgaaa tggttagttg ttataatata tttctctata acaagtcaac ctgcttctgc 780 ttgcaatcta aagacctgtc taaacctatt taacaatact gatgcagtaa ctgttcattg 840 ttttaatgaa aaccaaggat acatgctaac attagcctct ttgggattag ggataattac 900 tatgttgtat ttattagtaa aaatcataat tgaacttgtc aatggttttg tgctcggcag 960 atgggagaga tggtgtggag atataaagac cacaattatg cctgaaattg actcgatgga 1020 aaaagatatt gccctctcta gggagagact tgacctggga gaggatgccc ctgacgaaac 1080 cgacaactca ccaattcctt tttccaatga tggtattttt gaaatttaat taccttg 1137 // ID AB000728; SV 1; linear; genomic RNA; STD; VRL; 1136 BP. XX AC AB000728; XX DT 15-MAR-1999 (Rel. 59, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 5) XX DE Influenza C virus (C/Yamagata/9/88) M gene for M1 protein and CM2 protein, DE complete cds. XX KW . XX OS Influenza C virus (C/Yamagata/9/88) OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Gammainfluenzavirus. XX RN [1] RP 1-1136 RA Tada Y.; RT ; RL Submitted (27-JAN-1997) to the INSDC. RL Contact:Yuichiro Tada Yamagata University School of Medicine, Department of RL Bacteriology; Iida-nishi 2-2-2, Yamagata, Yamagata 990-9585, Japan XX RN [2] RX DOI; 10.1023/A:1007915215958. RX PUBMED; 9354270. RA Tada Y., Hongo S., Muraki Y., Sugawara K., Kitame F., Nakamura K.; RT "Evolutionary analysis of influenza C virus M genes"; RL Virus Genes 15(1):53-59(1997). XX DR MD5; 126451f93e8aedbfb9e76d55cc7891d7. XX FH Key Location/Qualifiers FH FT source 1..1136 FT /organism="Influenza C virus (C/Yamagata/9/88)" FT /segment="6" FT /host="Homo sapiens" FT /isolate="C/Yamagata/9/88" FT /mol_type="genomic RNA" FT /db_xref="taxon:224311" FT CDS 4..1128 FT /codon_start=1 FT /gene="M" FT /db_xref="GOA:Q9WAE4" FT /db_xref="InterPro:IPR004267" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q9WAE4" FT /protein_id="BAA75881.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT EGGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMKWLVVIIYFSIASQPASACNLKTCLNLFNNTDAVTVHCFN FT ENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSMEK FT DIALSRERLDLGEDAPDETDNSPIPFSNDGVFEI" FT CDS join(4..731,960) FT /codon_start=1 FT /gene="M" FT /product="M1 protein" FT /note="matrix protein" FT /db_xref="GOA:Q788G4" FT /db_xref="InterPro:IPR004271" FT /db_xref="UniProtKB/TrEMBL:Q788G4" FT /protein_id="BAA75882.1" FT /translation="MAHEILIAETEAFLKNVAPETRTAIISAITGGKSACKSAAKLIKN FT EHLPLMSGEATTMHIVMRCLYPEIKPWKKASDMLNKATSSLKKSEGRDIRKQMKAAGDF FT LGVESMMKMRAFRDDQIMEMVEEVYDHPDDYTPDIRIGTITAWLRCKNKKSERYRSNVS FT EGGRTALKIHEVRKASTAMNEIAGITGLGEEALSLQRQTESLAILCNHTFGSNIMRPHL FT EKAIKGVEGRVGEMGRMAMK" FT CDS 709..1128 FT /codon_start=1 FT /gene="M" FT /product="CM2 protein" FT /note="integral membrane protein" FT /db_xref="InterPro:IPR004267" FT /db_xref="UniProtKB/TrEMBL:Q9WAE5" FT /protein_id="BAA75883.1" FT /translation="MGRMAMKWLVVIIYFSIASQPASACNLKTCLNLFNNTDAVTVHCF FT NENQGYMLTLASLGLGIITMLYLLVKIIIELVNGFVLGRWERWCGDIKTTIMPEIDSME FT KDIALSRERLDLGEDAPDETDNSPIPFSNDGVFEI" XX SQ Sequence 1136 BP; 416 A; 193 C; 248 G; 279 T; 0 other; acaatggcac atgaaatatt gattgctgag acagaggcat ttctaaaaaa tgttgctcct 60 gaaaccagga cagcaataat ttcagcaata acaggaggga aatcagcctg caaatcagca 120 gctaaactga ttaagaatga acatcttccc ctaatgtctg gagaagccac cacaatgcac 180 atcgttatga ggtgcttata tcctgaaata aaaccatgga aaaaggcaag cgacatgctg 240 aataaagcaa cttctagttt gaaaaaatca gaaggaagag acatcagaaa gcaaatgaaa 300 gcagcaggag acttcttagg agtggagtca atgatgaaaa tgagggcctt tagagatgac 360 caaataatgg aaatggttga agaagtatat gatcatccag acgactacac accagacatc 420 cgaataggaa caatcacagc ttggttgaga tgcaaaaaca agaaaagtga aagatacagg 480 agtaatgtct cagaaggtgg aagaacagct ttaaagattc acgaagtaag aaaagccagc 540 acagcaatga acgaaattgc tggtattact ggccttggag aagaagcact atctctccaa 600 agacaaacag aaagtttggc catattatgt aatcacactt ttggaagtaa tataatgaga 660 ccccacttgg aaaaagcaat aaaaggagtt gaaggcagag ttggagagat gggacgaatg 720 gcaatgaaat ggttagttgt tataatatat ttctctatag caagtcaacc tgcttctgct 780 tgcaatctaa agacctgtct aaacctattt aacaatactg atgcggtaac tgtccattgt 840 tttaatgaaa accaaggata catgctaaca ttagcctctt taggattagg gataattact 900 atgttgtatt tattagtaaa aatcataatt gaacttgtca atggttttgt gctcggcaga 960 tgggagagat ggtgtggaga tataaagacc acaattatgc ctgaaattga ctcgatggaa 1020 aaagatattg ccctctctag ggagagactt gacctgggag aggatgcccc tgacgaaacc 1080 gacaactcac caattccctt ttccaatgat ggtgtttttg aaatttaatt accttg 1136 // ID AB000780; SV 1; linear; genomic DNA; STD; VRL; 1384 BP. XX AC AB000780; XX DT 18-APR-1998 (Rel. 55, Created) DT 23-APR-1998 (Rel. 55, Last updated, Version 2) XX DE Anomala cuprea entomopoxvirus DNA for fusolin, complete cds. XX KW fusolin. XX OS Anomala cuprea entomopoxvirus OC Viruses; Poxviridae; Entomopoxvirinae; Alphaentomopoxvirus. XX RN [1] RP 1-1384 RA Mitsuhashi W.; RT ; RL Submitted (28-JAN-1997) to the INSDC. RL Wataru Mitsuhashi, National Institute of Sericultural and Entomological RL Science, Department of Insect Genetics and Breeding; Ohwashi 1-2, Tsukuba, RL Ibaraki 305-8634, Japan (E-mail:mitsuhas@nises.affrc.go.jp, RL Tel:+81-298-38-6112) XX RN [2] RX DOI; 10.1016/S0965-1748(97)00069-6. RX PUBMED; 9474783. RA Mitsuhashi W., Saito H., Sato M.; RT "Complete nucleotide sequence of the fusolin gene of an entomopoxvirus in RT the cupreous chafer, Anomala cuprea Hope (Coleoptera: Scarabaeidae)"; RL Insect Biochem. Mol. Biol. 27(10):869-876(1997). XX DR MD5; 9855633204fb73f23367e5b8516d83fa. XX FH Key Location/Qualifiers FH FT source 1..1384 FT /organism="Anomala cuprea entomopoxvirus" FT /mol_type="genomic DNA" FT /db_xref="taxon:62099" FT CDS 99..1220 FT /codon_start=1 FT /transl_table=1 FT /product="fusolin" FT /db_xref="InterPro:IPR004302" FT /db_xref="InterPro:IPR014756" FT /db_xref="PDB:4YN1" FT /db_xref="UniProtKB/TrEMBL:O70709" FT /protein_id="BAA25629.1" FT /translation="MLKLYILLILLGYVYGHGYVTFPIARQRRCNVQGGFWWPPEGTNI FT PDPMCRAAYQYVFNKVLSEGGSTSQAASAAQYMFQQDNEYAALAGPNFRDICWIKEQVV FT PDYLCAAGADTWRIRPFGDKTGMDIVGSWPPTVIPLENNFVNTIPIELEFCPTAIHEPS FT YFEVYVTTPEFNVYRDKVTWPLLELVFNSTVPLVNRRADSLCTANARVYRMIVPVPYRQ FT TQFVIYVRWQRIDPVGEGFYNCVDAVFANRPGPDPEDMIPPPPAEEDCDYTDSQGNRYC FT PFSTFSNSYYSNREHYNHKHDYNRYSNYYDHNTYTYNYGKYNKNKYSDTTYNNRAWEIA FT YAGYTEDHTGLNRQTECDGISRFCVSTVRNRVY" XX SQ Sequence 1384 BP; 479 A; 191 C; 241 G; 473 T; 0 other; aattaaaaat aataataatg tattcctaca taaatatttt aatgatgata tttactaaat 60 gaaataatag tgttgaaaat tgttgttcct acataaaaat gttaaaatta tatatattat 120 taatcttatt aggttacgta tacggccacg gatatgtaac ctttcctata gctagacaga 180 gacgttgtaa tgttcaaggt ggattttggt ggccaccaga aggaacaaat atcccggatc 240 cgatgtgtag agcagcttat caatatgtat ttaacaaagt gttatctgaa gggggcagta 300 cttctcaagc agctagtgca gctcaatata tgtttcagca agataatgaa tatgcagctc 360 tcgccggacc aaatttccgt gatatttgtt ggataaaaga acaagtagtt cctgattatt 420 tatgtgctgc tggagcagat acttggagaa tcagaccatt tggagataag actggtatgg 480 atattgtagg tagttggcca ccaacagtta ttccattaga aaataatttt gttaatacta 540 ttcctataga attagaattc tgtccaactg caattcatga accaagttat tttgaagttt 600 atgtaactac accagaattc aatgtgtata gagataaagt tacttggcca ctattagaat 660 tagtatttaa tagtactgta ccactagtta atagacgtgc tgattcatta tgtactgcta 720 atgctagagt ttatagaatg attgttcctg ttccatatag acaaacccaa tttgtaatat 780 atgttcgttg gcagcgtatc gatcctgttg gtgagggatt ttataattgt gttgatgctg 840 tatttgcaaa cagaccaggc cccgatccag aagatatgat acctcctcca ccagctgaag 900 aagattgtga ttatacagat agtcaaggaa atagatattg tccgtttagt acgtttagta 960 attcatacta ttctaatcgc gaacattaca atcataagca tgattacaat agatatagta 1020 attattacga tcataatacc tatacttata attatggtaa atataataaa aataaatatt 1080 ccgacactac ttataataat agagcatggg aaatagcata tgctggatat actgaagatc 1140 atacaggtct aaatagacaa acagaatgtg atggaataag tagattttgt gtgtctacag 1200 taagaaatag agtatattaa tgaatttaca ttcgattaaa tgtttatcaa atatatctat 1260 tatgcgcgct acggttattg ctcctgaaat attttgttat tttttgtttg ttaatgcttt 1320 ttctgaaatt atataattgt taaataatta aattataatg tatcttccaa tgaataaaat 1380 atat 1384 // ID AB000819; SV 1; linear; genomic RNA; STD; VRL; 856 BP. XX AC AB000819; XX DT 03-OCT-1997 (Rel. 52, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 2) XX DE Tinaroo virus RNA for two overlapping orfs, complete cds. XX KW TIN S segment. XX OS Tinaroo virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-856 RA Akashi H.; RT ; RL Submitted (31-JAN-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX DOI; 10.1016/S0168-1702(97)00071-3. RX PUBMED; 9282785. RA Akashi H., Kaku Y., Kong X., Pang H.; RT "Antigenic and genetic comparisons of Japanese and Australian Simbu RT serogroup viruses: evidence for the recovery of natural virus RT reassortants"; RL Virus Res. 50(2):205-213(1997). XX DR MD5; ec778897cfde4c300149c28a714abc3c. DR EuropePMC; PMC1235861; 16188988. DR EuropePMC; PMC2443122; 18554406. DR EuropePMC; PMC4667577; 26517653. XX FH Key Location/Qualifiers FH FT source 1..856 FT /organism="Tinaroo virus" FT /strain="CSIRO153" FT /mol_type="genomic RNA" FT /note="TIN S segment" FT /db_xref="taxon:66264" FT CDS 34..735 FT /codon_start=1 FT /note="one of two overlapping open reading frames" FT /db_xref="GOA:O36173" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O36173" FT /protein_id="BAA22550.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGVKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWI FT AEQCKGNQIKFAEAAATVVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFGSVAQISWAKSGFSPAA FT RAFLAQFGIQI" FT CDS 59..334 FT /codon_start=1 FT /note="one of two overlapping open reading frames" FT /db_xref="GOA:O36174" FT /db_xref="InterPro:IPR000797" FT /db_xref="UniProtKB/TrEMBL:O36174" FT /protein_id="BAA22551.1" FT /translation="MFHNGMQLHLTRMQGMWHLSVSMGSSSTLLLLESSSSTRRRPRWS FT YIRRHNQVSILLLQGSNLQWLITIFPSTLQIQCQTLPLRSIASQAI" XX SQ Sequence 856 BP; 216 A; 191 C; 199 G; 250 T; 0 other; agtagtgaac tccactatta actacgcatt gcaatggcaa atcaatttat tttcaacgat 60 gttccacaac ggaatgcagc tacatttaac ccggatgcag ggtatgtggc atttatcagt 120 aagtatgggc agcagctcaa ctttactgtt gctagagtct tcttcctcaa ccagaagaag 180 gccaagatgg tcttacataa gacgccacaa ccaagtgtcg atcttacttt tgcaggggtc 240 aaatttacag tggttaataa ccattttccc cagtacactg caaatccagt gtcagacact 300 gcctttacgc tccatcgcat ctcaggctat ttagctcgct ggattgctga gcagtgcaag 360 ggtaaccaga tcaagtttgc agaggcagct gccacagttg tgatgccttt ggctgaagtg 420 aagggctgca cttggagtga tgggtatgca atgtacttgg gatttgcccc aggtgctgaa 480 atgttcctcg agacatttga gttctaccca ctggttatcg acatgcaccg tgtgataaaa 540 gatgggatgg atgtcaactt catgaggaag gtcctacgcc agaggtatgg acagctgact 600 gcagaagagt ggatgacatc taagttagac gcagtcaagg ctgcatttgg ctcagttgcc 660 cagatatctt gggccaagtc tggcttctca cctgcagcta gagctttcct ggcccaattt 720 ggtatccaga tctaatctta actgattctc cagtcttctg tcttctcttt ctaagtgcac 780 catgtctatg tggtgcatac ctttattcag ctgcttggat tttattgttt atagttaatt 840 agtggagcac actact 856 // ID AB000833; SV 1; linear; genomic DNA; STD; VRL; 3099 BP. XX AC AB000833; XX DT 12-FEB-1997 (Rel. 50, Created) DT 04-SEP-1998 (Rel. 56, Last updated, Version 2) XX DE Bacteriophage Mu DNA for ORF1, sheath protein gpL, ORF2, ORF3, complete DE cds. XX KW L; ORF1; ORF2; ORF3; sheath protein gpL. XX OS Escherichia virus Mu OC Viruses; Caudovirales; Myoviridae; Muvirus. XX RN [1] RP 1-3099 RA Takeda S.; RT ; RL Submitted (03-FEB-1997) to the INSDC. RL Shigeki Takeda, Tokyo Institute of Technology, Depaerment of Life Science; RL 4259 Nagatsuta-cho Midori-ku, Yokohama, Nagatsuta-cho, Kanagawa 226, Japan RL (E-mail:stakeda@bio.titech.ac.jp, Tel:+81-45-924-5712, Fax:+81-45-924-5805) XX RN [2] RP 1-3099 RX DOI; 10.1016/S0167-4781(98)00102-X. RX PUBMED; 9714755. RA Takeda S., Sasaki T., Ritani A., Howe M.M., Arisaka F.; RT "Discovery of the tail tube gene of bacteriophage Mu and sequence analysis RT of the sheath and tube genes"; RL Biochim. Biophys. Acta 1399(1):88-92(1998). XX DR MD5; df563cd96499063bffeff0ae185718d7. DR EuropePMC; PMC97389; 10722605. DR GOA; P0DJY4. DR UniProtKB/Swiss-Prot; P0DJY4; TAPFS_BPMU. XX FH Key Location/Qualifiers FH FT source 1..3099 FT /organism="Escherichia virus Mu" FT /mol_type="genomic DNA" FT /db_xref="taxon:10677" FT CDS 244..450 FT /codon_start=1 FT /transl_table=11 FT /product="ORF1" FT /db_xref="GOA:P79677" FT /db_xref="InterPro:IPR024400" FT /db_xref="UniProtKB/Swiss-Prot:P79677" FT /protein_id="BAA19194.1" FT /translation="MMLKIKPAAGKAIRDPLTMKLLASEGEEKPRNSFWIRRLAAGDVV FT EVGSTENTADDTDAAPKKRSKSK" FT CDS 447..1934 FT /codon_start=1 FT /transl_table=11 FT /gene="L" FT /product="sheath protein gpL" FT /db_xref="GOA:P79678" FT /db_xref="InterPro:IPR007067" FT /db_xref="InterPro:IPR020287" FT /db_xref="InterPro:IPR035089" FT /db_xref="InterPro:IPR035326" FT /db_xref="UniProtKB/Swiss-Prot:P79678" FT /protein_id="BAA19195.1" FT /translation="MSDISFNAIPSDVRVPLTYIEFDNSNAVSGTPAPRQRVLMFGQSG FT SKASAAPNVPVRIRSGSQASAAFGQGSMLALMADAFLNANRVAELWCIPQGNGTGNAAV FT GEISLSGTAGENGSLVTYIAGQRLAVSVAAGATGAALADLLVARIKGQPDLPVTAEVRA FT DSGDDDTHADVVLSAKFTGALSAVDVRWNYYAGETTPYGIITAFKAASGKNGNPDISAS FT IAGMGDLQYKYIVMPYTDEPNLNLLRTELQERWGPVNQADGFAVTVLSGTYGDISTFGV FT SRNDHLISCMGIAGAPEPSYLYAATLCAVASQALSIDPARPLQTLTLPGRMPPAVGDRF FT TWSERNALLFDGISTFNVNDGGEMQIERMITMYRTNKYGDSDPSYLNVNTIATLSYLRY FT SLRTRITQKFPNYKLASDGTRFATGQAVVTPSVIKTELLALFEEWENAGLVEDFDTFKE FT ELYVARNKDDKDRLDVLCGPNLINQFRIFAAQVQFIL" FT CDS 1944..2300 FT /codon_start=1 FT /transl_table=11 FT /product="ORF2" FT /db_xref="GOA:P79679" FT /db_xref="InterPro:IPR019596" FT /db_xref="UniProtKB/Swiss-Prot:P79679" FT /protein_id="BAA19196.1" FT /translation="MAGNQRQGVAFIRVNGMELESMEGASFTPSGITREEVTGSRVYGW FT KGKPRAAKVECKIPGGGPIGLDEIIDWENITVEFQADTGETWMLANAWQADEPKNDGGE FT ISLVLMAKQSKRIA" FT CDS 2310..2744 FT /codon_start=1 FT /transl_table=11 FT /product="ORF3" FT /db_xref="GOA:P79680" FT /db_xref="InterPro:IPR019289" FT /db_xref="UniProtKB/Swiss-Prot:P79680" FT /protein_id="BAA19197.1" FT /translation="MDEMNLGPEAQELHDSIVAEIQSGVLKLKDGLPFGTGDETEMQYD FT VTLRELTAGDMIDAQAAAEKLVMSKEGPVLVSSPSRMGLEMLRRQIASVGCIKGPLSMA FT LIRKLSVDDFQRLSLATEMYDMAVAASLTQERGRVAAVPE" XX SQ Sequence 3099 BP; 739 A; 784 C; 904 G; 672 T; 0 other; acggtcagac gtttggcccg accaccggga tgaggctgac gcaggtcaga aatctttgtg 60 acgacaaccg tatcaatgcc ggtgtggtgc tttacggcgt tctgttcagt ggcacaaccc 120 cgctgccgtc cgtagtggac ctggattcgc tggatgatta cgagcgtcac tggcagacct 180 ggaaattccc ggacgaaacc ccggaatttg ccgcacatat caatgtgaat caggaaaagg 240 atcatgatgc tgaaaattaa acccgcagcg ggaaaagcca tccgtgaccc gctcacgatg 300 aaattactgg cgtctgaggg agaagaaaag ccccgtaaca gtttctggat acgtcgcctt 360 gcagccggtg atgtggttga agtcgggagc accgaaaaca cggcggatga taccgacgct 420 gcgccgaaaa aacggagtaa atcgaaatga gcgatatttc atttaacgcg atcccgtcag 480 atgttcgcgt tcctctgacg tatatcgaat ttgataacag caatgccgtc agcggaacac 540 cggctccccg tcagcgcgtg ctgatgttcg ggcaaagcgg aagtaaagcc agtgcggcac 600 caaacgtgcc tgtccgtatc cgttccggct cacaggccag tgcggcgttt ggtcagggtt 660 ccatgctggc actgatggca gatgcattcc tgaacgctaa ccgcgtggcg gagctgtggt 720 gtattccgca ggggaacggc accggtaatg ctgctgtcgg tgaaatttca ctgtcaggaa 780 cggcaggcga aaacggctcg cttgtgactt acattgccgg tcagcgactg gcggtatctg 840 tcgcagcagg tgcaacggga gcggcgctgg ctgacctgct ggttgcccga atcaaaggcc 900 agcctgattt accggtgacg gcagaagttc gcgcagacag cggggatgat gacacccatg 960 cagatgtggt tctgagtgca aaatttacgg gtgcattatc tgccgtggac gtgcgctgga 1020 actattacgc gggtgaaacg accccttacg ggattatcac ggcattcaaa gccgcctccg 1080 ggaaaaatgg caacccggat atcagcgcaa gtatcgcggg aatgggcgat ctgcaatata 1140 aatatattgt gatgccctat accgatgaac cgaacctgaa tctgttacgc actgaattgc 1200 aggaacgctg gggaccggtc aatcaggctg atggctttgc cgtgacagtg ctgtccggca 1260 cgtatgggga catttccacg tttggtgtca gccgtaatga ccatctgatt tcctgtatgg 1320 ggattgccgg tgcaccggaa ccgtcatatc tgtacgccgc cacactgtgt gccgttgcca 1380 gccaggcgct ttccatcgac ccggcgcgtc cactccagac gctgacgttg cccggaagaa 1440 tgccgcctgc ggtgggggat cgtttcacct ggtcagaacg taatgcgctg ctgtttgacg 1500 gcatctccac gtttaacgtg aatgatggtg gtgaaatgca gattgaacgc atgatcacga 1560 tgtaccgcac aaacaagtac ggtgacagtg atccgtctta tctgaacgtg aataccatcg 1620 ccacgctgag ttatctgcgt tattcgctgc gaacccgcat cacgcagaaa ttcccgaact 1680 acaagctggc aagtgatggc acccgctttg ccaccggtca ggccgtggtg acgccatccg 1740 tgatcaaaac ggagctgctg gcactgtttg aagaatggga aaacgccgga ctggtcgagg 1800 atttcgacac gttcaaagag gagctgtatg tggcacgtaa caaggacgac aaagaccgtc 1860 ttgatgtgct gtgcggcccg aatctgatta accagttccg cattttcgcg gcacaagttc 1920 agttcattct gtaaggagca tttatggctg gaaatcagcg tcagggggtg gcgttcatcc 1980 gtgtcaatgg catggagctt gaatcaatgg aaggtgcctc cttcacgcct tccggcatca 2040 cccgtgaaga agtgaccggc tcgcgggttt atggctggaa aggtaaacct cgtgccgcaa 2100 aagtggaatg caaaattccg ggcggtggtc ccatcgggct ggatgaaatt atcgactggg 2160 aaaacatcac cgtcgaattc caggctgata ccggtgaaac ctggatgctg gcgaatgcct 2220 ggcaggcgga tgaaccgaaa aacgacggcg gcgaaatttc gctggtactg atggcaaaac 2280 aaagcaaacg cattgcataa ggggaaacaa tggacgaaat gaatttaggt cctgaagcac 2340 aggaactgca tgacagcatt gtggcagaaa ttcagtccgg cgtgctgaaa ctgaaagacg 2400 gcctgccgtt cggcaccggt gacgagactg aaatgcagta tgacgtgacg ctgcgtgaac 2460 tgaccgcagg cgatatgatt gatgcacagg cggctgctga aaagctggta atgagcaagg 2520 aaggtccggt gctggtcagt tccccgtccc ggatgggact ggaaatgctg cgccgacaga 2580 ttgccagcgt gggctgcatc aaaggcccgt tgtcgatggc gctgattcgt aaactgtctg 2640 tcgatgactt ccagcgtctg tcgctggcca cagaaatgta cgacatggct gtggcggcat 2700 cgctgacaca agaacggggg cgagtggctg cggtgccgga atgatattga gaaagcggcg 2760 acagcgattg gcgttattct gaaaagtggc ccggaatggg ccttgtctct cccgctgtcc 2820 cgctttttcc ggcactgcca gcaggctaaa accctctctc aatatcaccg ttaaatcagg 2880 aaatatctat gaccgggaaa cgcttaaagg cgtctgtcat tattgatctt aatggcaatc 2940 tttcccggcg ttcccgccag tattcgaacc agataaacgc cctgtcccgg taacgggcaa 3000 agttcccttc gtgccctgcg tatggaagtt gtgcgcgttt ctggtgccat tgacagaatg 3060 ggttcactgt caacccgtac attccgaatg ctgtcaacc 3099 // ID AB000836; SV 1; linear; genomic RNA; STD; VRL; 1207 BP. XX AC AB000836; XX DT 11-FEB-1998 (Rel. 54, Created) DT 29-DEC-2008 (Rel. 98, Last updated, Version 5) XX DE Onion yellow dwarf virus NIb gene for polyprotein (RNA-dependent RNA DE polymerase and coat protein), partial cds. XX KW . XX OS Onion yellow dwarf virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-1207 RA Sumi S., Tsuneyoshi T., Matsumi T., Natsuaki K.T.; RT ; RL Submitted (03-FEB-1997) to the INSDC. RL Contact:Shin-ichiro Sumi Wakunaga Pharmaceutical Co., Ltd., Institute for RL Biotechnology Research; 1624 Shimokotachi, Koda-Cho, Takata-Gun, Hiroshima RL 739-11, Japan XX RN [2] RX DOI; 10.1007/s007050050271. RX PUBMED; 9505969. RA Tsuneyoshi T., Matsumi T., Natsuaki K.T., Sumi S.; RT "Nucleotide sequence analysis of virus isolates indicates the presence of RT three potyvirus species in Allium plants"; RL Arch. Virol. 143(1):97-113(1998). XX DR MD5; 0b6b755c963efaa86a3c1ee625d42fa6. XX FH Key Location/Qualifiers FH FT source 1..1207 FT /organism="Onion yellow dwarf virus" FT /mol_type="genomic RNA" FT /isolation_source="garlic" FT /clone="Gams" FT /db_xref="taxon:43130" FT CDS <1..1000 FT /codon_start=2 FT /transl_table=1 FT /gene="NIb" FT /product="polyprotein" FT /db_xref="GOA:O55504" FT /db_xref="InterPro:IPR001592" FT /db_xref="UniProtKB/TrEMBL:O55504" FT /protein_id="BAA24784.1" FT /translation="YPELLHEIRKFYHWLLEQAPYNSIAQNGKAPYIAETALKKLFTNV FT DASEEELEKYYELYETLNDEADICKEVRYQAGSGEDAAAQSSSAKQVTKQKDKDVDTGT FT TGKFSVPRIKALSDKMRFPKVGKNVVLNAEHLLAYKPEQIELYNTRATLRQFENWYLAI FT KKEYDVDDEQMKIILDGLMVWCIENGTSPNLTGNWTMMDGEEQVEYPLAPVLDNAKPTF FT RQIMAHFSDAAEAYIEYRNATEKYMPRYGLQRNLTELSLARYAFDFYEMTSKTPTRAKE FT AHMQMKAAAIRGATNRLFGLDGNVNTTEEDTERHTAADVNKNQHTLLGIKM" FT mat_peptide <1..226 FT /product="RNA-dependent RNA polymerase" FT /note="C-terminal portion" FT mat_peptide 227..997 FT /product="coat protein" XX SQ Sequence 1207 BP; 419 A; 222 C; 275 G; 291 T; 0 other; ataccctgaa ttgttgcatg agatacgaaa attttaccac tggttactgg agcaagcgcc 60 gtataattcg atagctcaaa atggaaaagc accatacata gcagaaacag ctttgaagaa 120 actgtttaca aatgtagatg caagcgaaga agagttggaa aaatattacg aactatacga 180 aacacttaat gatgaagccg acatttgtaa ggaagtacga tatcaggctg gttcaggtga 240 agatgcagcg gcgcaatcaa gctcagcgaa acaagtcacc aagcaaaaag ataaagacgt 300 agacacagga acaactggga agttttcagt accgcggatt aaggcattat ccgacaagat 360 gagattccct aaagttggga aaaacgtcgt actgaacgct gaacatttgt tggcgtataa 420 accagagcag atcgaattat ataatacaag ggcaacctta cgtcaattcg agaactggta 480 cttggcaatc aagaaagagt atgatgttga tgacgaacaa atgaaaatca tactcgatgg 540 actaatggtt tggtgcattg aaaatggaac ttcaccaaat ttaacaggta actggacgat 600 gatggatggc gaagaacagg ttgaataccc actcgcacca gtactagaca atgcaaaacc 660 gacatttaga caaattatgg cacatttcag tgatgcagct gaagcataca ttgaatatcg 720 caatgccact gaaaagtaca tgccccggta cggacttcag cgaaatttaa cagaattaag 780 tttggcacgt tacgcattcg atttttacga aatgacttca aagaccccta cgagggccaa 840 agaagcacat atgcaaatga aggcagcagc gattagaggg gctactaatc gcttgtttgg 900 cctagatggt aacgtcaaca ccaccgaaga ggacacggag aggcacacgg ctgcagatgt 960 gaataagaac caacacactt tgcttggtat taaaatgtaa atcagctgtg tacttctagt 1020 tttatataag tattatataa aaacgcactt agtatgtatt cttcttcatt tcgtttaacc 1080 tgactttgag cagcgaagcg tgtgtaccac cagttgtggc aaacgatacg gttaaatatt 1140 tgtgattaat gttgggcttc atgagagtga tgtatcacgg ggtggatcct agcgtgaatt 1200 acgaaga 1207 // ID AB000837; SV 1; linear; genomic RNA; STD; VRL; 1213 BP. XX AC AB000837; XX DT 11-FEB-1998 (Rel. 54, Created) DT 16-JAN-2009 (Rel. 99, Last updated, Version 5) XX DE Onion yellow dwarf virus Nlb gene for polyprotein (RNA polymerase and coat DE protein), partial cds. XX KW . XX OS Onion yellow dwarf virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-1213 RA Sumi S.; RT ; RL Submitted (03-FEB-1997) to the INSDC. RL Contact:Shin-ichiro Sumi Wakunaga Pharmaceutical Co., Ltd., Institute for RL Biotechnology Research; 1624 Shimokotachi, Koda-Cho, Takata-Gun, Hiroshima RL 739-11, Japan XX RN [2] RX DOI; 10.1007/s007050050271. RX PUBMED; 9505969. RA Tsuneyoshi T., Matsumi T., Natsuaki K.T., Sumi S.; RT "Nucleotide sequence analysis of virus isolates indicates the presence of RT three potyvirus species in Allium plants"; RL Arch. Virol. 143(1):97-113(1998). XX DR MD5; c87d4dfa92b64d3b4e398d6eceb97a30. XX FH Key Location/Qualifiers FH FT source 1..1213 FT /organism="Onion yellow dwarf virus" FT /mol_type="genomic RNA" FT /isolation_source="garlic" FT /clone="Garw" FT /db_xref="taxon:43130" FT CDS <1..1000 FT /codon_start=2 FT /transl_table=1 FT /gene="NIb" FT /db_xref="GOA:O55505" FT /db_xref="InterPro:IPR001592" FT /db_xref="UniProtKB/TrEMBL:O55505" FT /protein_id="BAA24785.1" FT /translation="YPDLLHEIRKFYQWLLEQAPYNMIAQSGKAPYIAETALKKLFTNV FT DASEVELEKYYEVYTALENEDAALKEVRYQAGEGEDAAAQSSASRQVTKQKDKDVDTGT FT TGKFAVPRIKALSDKMRFPKVGKTVVLNAEHLLAYKPDQIELYNTRATKSQFENWYNAV FT KKEYDVDDEQMKILLNGLMVWCIENGTSPNLSGNWTMMDDEEQVEYPLAPVLDNAKPTF FT RQIMAHFSDAAEAYIEYRNATEKYMPRYGLQRNITELSLARYAFDFYEMTSKTPKRAKE FT AHMQMKAAAIRGATNRLFGLDGNVNTTEEDTERHTAADVNKNQHTLLGIRM" FT mat_peptide <1..226 FT /product="RNA-dependent RNA polymerase" FT /note="C-terminal portion" FT mat_peptide 227..997 FT /product="coat protein" FT /citation=[2] XX SQ Sequence 1213 BP; 415 A; 207 C; 278 G; 313 T; 0 other; ttatcccgat ctgttacacg agattcggaa attctatcaa tggctattag aacaagctcc 60 gtataacatg atagctcaaa gtggaaaggc accatacata gcagaaacag ctctcaagaa 120 gttgtttact aacgtcgatg cgagtgaggt ggaattagag aagtattacg aagtgtatac 180 ggctcttgag aatgaggatg ctgctcttaa ggaggttcgt tatcaagctg gagaaggaga 240 agatgcagca gcacaatcaa gcgcttcgag gcaagtcaca aagcagaaag ataaagatgt 300 tgatactggc acaaccggta aatttgcagt tccaagaatt aaggctttat ctgacaagat 360 gaggtttcca aaagttggta aaaccgttgt acttaatgca gaacacttgt tagcttacaa 420 accagatcaa atcgaactgt ataatacgag agcaacaaag agtcaatttg aaaactggta 480 taatgctgta aagaaagagt acgacgttga tgatgagcaa atgaaaattt tactaaatgg 540 tttgatggtt tggtgtattg agaatggaac atcacctaat ttatcaggaa actggaccat 600 gatggatgac gaagaacaag ttgaatatcc actagcacca gtcctcgaca acgcaaaacc 660 aaccttcaga caaataatgg cacatttcag tgatgcagct gaagcataca ttgaatatag 720 aaacgccaca gaaaaataca tgccccggta tggacttcag cgcaatataa cagaacttag 780 tttggcacgt tacgcattcg atttttatga gatgacttct aaaactccta aacgagcgaa 840 agaagcacat atgcaaatga aggcggcagc gattagaggg gcaactaatc gtttgtttgg 900 cctggatggt aacgtaaaca caacggaaga ggacacggaa agacacacgg ctgcagatgt 960 taacaagaac cagcacacgt tgcttggtat taggatgtga agctgcactg gtgtttttag 1020 ttttatatat atgtagttat ataagaacgt atgtaatatg tattcctctc catttcgttt 1080 aacttgaatt cgagcaacga aatgtggtgt accactagtt gtggcgaatg atatagttaa 1140 atatctgtga ttaatgttga ccttcatgag tgtgatgtat cacgaggtga atcttagcgt 1200 gaattacgga gac 1213 // ID AB000838; SV 1; linear; genomic RNA; STD; VRL; 1215 BP. XX AC AB000838; XX DT 11-FEB-1998 (Rel. 54, Created) DT 16-JAN-2009 (Rel. 99, Last updated, Version 5) XX DE Onion yellow dwarf virus NIb gene for polyprotein (RNA polymerase and coat DE protein), partial cds. XX KW . XX OS Onion yellow dwarf virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-1215 RA Sumi S.; RT ; RL Submitted (03-FEB-1997) to the INSDC. RL Contact:Shin-ichiro Sumi Wakunaga Pharmaceutical Co., Ltd., Institute for RL Biotechnology Research; 1624 Shimokotachi, Koda-Cho, Takata-Gun, Hiroshima RL 739-11, Japan XX RN [2] RX DOI; 10.1007/s007050050271. RX PUBMED; 9505969. RA Tsuneyoshi T., Matsumi T., Natsuaki K.T., Sumi S.; RT "Nucleotide sequence analysis of virus isolates indicates the presence of RT three potyvirus species in Allium plants"; RL Arch. Virol. 143(1):97-113(1998). XX DR MD5; 1c9a94e7ccff407f4981fa8f5e04044b. XX FH Key Location/Qualifiers FH FT source 1..1215 FT /organism="Onion yellow dwarf virus" FT /mol_type="genomic RNA" FT /isolation_source="garlic" FT /clone="Gfw" FT /db_xref="taxon:43130" FT CDS <1..1000 FT /codon_start=2 FT /transl_table=1 FT /gene="NIb" FT /product="polyprotein" FT /db_xref="GOA:O55506" FT /db_xref="InterPro:IPR001592" FT /db_xref="UniProtKB/TrEMBL:O55506" FT /protein_id="BAA24786.1" FT /translation="YPDLLHEIRKFYQWLLEQAPYNVIAQSGKAPYIAETALKKLFTNI FT DASEAELEKYYEVYMDLENEEAIPKKVRYQAGEGEDAAAQSSTSQQVAKQKDKDVDTGT FT TGKFAIPRIKALSDKMRFPKVGKTVVLNAEHLLAYKPEQIELYNTRSTKQQFENWYNAI FT KKEYDVNDEQMKILLNGLMVWCIENGTSPNLSGNWTMMDGDDQIEYPLAPIVDNAKPTF FT RQIMAHFSDAAEAYIEYRNATEKYMPRYGLQRNLTELSLARYAFDFYEMTSKTPKRAKE FT AHMQMKAAAIRGVTNRMFGLDGNVNTTEEDTERHTAADVNKNQHTLLGIKM" FT mat_peptide <1..226 FT /product="RNA-dependent RNA polymerase" FT /note="C-terminal portion" FT mat_peptide <227..997 FT /product="coat protein" XX SQ Sequence 1215 BP; 429 A; 210 C; 273 G; 303 T; 0 other; ttacccagat cttttgcacg aaattcggaa attttatcaa tggctcttag aacaagctcc 60 atataacgta atagctcaga gcggaaaagc accttacata gcagaaacag ctctcaaaaa 120 gttgtttact aacattgatg caagtgaggc agaattggag aaatattatg aagtatatat 180 ggaccttgaa aatgaagagg caattccgaa gaaggtccgc taccaggcag gagaagggga 240 agatgcagca gcacaatcaa gcacgtcaca acaagtcgca aagcagaagg acaaggatgt 300 tgatactggc actactggta aatttgcaat cccgagaatt aaagcgctgt ctgataaaat 360 gagatttcca aaagttggta agaccgttgt actcaacgca gaacacttgt tggcatacaa 420 gccagaacag attgaattgt acaataccag atcaacaaag cagcaatttg agaactggta 480 taatgcaata aagaaagaat atgatgtcaa cgatgagcaa atgaaaattt tactaaatgg 540 attaatggtt tggtgcattg agaacggaac atctccaaat ttatcaggaa attggactat 600 gatggatggt gatgaccaaa ttgaatatcc gttggcgcct attgtggata acgcgaaacc 660 aacatttagg caaataatgg cgcatttcag tgatgcggct gaagcataca ttgaatatag 720 gaacgccaca gaaaaatata tgccccgata tggacttcag cgaaatttaa cagaacttag 780 tttggcacgt tacgcattcg atttttacga gatgacttca aaaactccta aacgagcaaa 840 agaagcgcac atgcaaatga aggcggctgc gattagaggg gtaactaacc gcatgtttgg 900 cctggatggt aacgtaaaca ctacagaaga ggacacggaa agacacacag cagcggatgt 960 caataagaac cagcacacgt tgcttgggat aaaaatgtga aaccatgttg ttgtctttag 1020 ttttatatat atatatagtt atataaaaac gtatgtaata tgtaatcctc ttcatttcgt 1080 ttaatctgcc ttcgagcaac gaaatgtggt gtaccactag ttgtggcgaa cgatacggtt 1140 aaacatctgt gattaatgtt gaacttcatg agagtgatgt atcacgaggt gaattttggc 1200 gtgaattacg gagac 1215 // ID AB000839; SV 1; linear; genomic RNA; STD; VRL; 1215 BP. XX AC AB000839; XX DT 11-FEB-1998 (Rel. 54, Created) DT 18-JAN-2009 (Rel. 99, Last updated, Version 6) XX DE Onion yellow dwarf virus NIb gene for polyprotein (RNA polymerase and coat DE protein), partial cds. XX KW . XX OS Onion yellow dwarf virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-1215 RA Sumi S.; RT ; RL Submitted (03-FEB-1997) to the INSDC. RL Contact:Shin-ichiro Sumi Wakunaga Pharmaceutical Co., Ltd., Institute for RL Biotechnology Research; 1624 Shimokotachi, Koda-Cho, Takata-Gun, Hiroshima RL 739-11, Japan XX RN [2] RX DOI; 10.1007/s007050050271. RX PUBMED; 9505969. RA Tsuneyoshi T., Matsumi T., Natsuaki K.T., Sumi S.; RT "Nucleotide sequence analysis of virus isolates indicates the presence of RT three potyvirus species in Allium plants"; RL Arch. Virol. 143(1):97-113(1998). XX DR MD5; ef896c806e7b995c7bbaa3ec9b7a5a68. XX FH Key Location/Qualifiers FH FT source 1..1215 FT /organism="Onion yellow dwarf virus" FT /mol_type="genomic RNA" FT /isolation_source="garlic" FT /clone="Guae" FT /db_xref="taxon:43130" FT CDS <1..1000 FT /codon_start=2 FT /transl_table=1 FT /gene="NIb" FT /product="polyprotein" FT /db_xref="GOA:O55507" FT /db_xref="InterPro:IPR001592" FT /db_xref="UniProtKB/TrEMBL:O55507" FT /protein_id="BAA24787.1" FT /translation="YPDLLHEIRKFYQWLLEQAPYNMIAQSGKAPYIAETALKKLFTNI FT DASEVELEKYYEVYLDIENEEVTQSEVRYQAGEGEDAAAQSSTSKQVTKQKDKDVDTGT FT TGKFEIPRIKVLSDKMRFPKVGKNVVLNAEHLLAYKPDQIELYNTRSTKQQFENWYNAI FT KKEYDVNDEQMKILLNGLMVWCIENGTSPNLSGNWTMMDGDEQVEYPLAPIVDNAKPTF FT RQIMAHFSDAAEAYIEYRNATEKYMPRYGLQRNLTELSLARYAFDFYEMTSKTPKRAKE FT AHMQMKAAAVRGATNRLFGLDGNVNTTEEDTERHTAADINKNHHPFPGIKM" FT mat_peptide <1..226 FT /product="RNA-dependent RNA polymerase" FT /note="C-terminal portion" FT mat_peptide <227..997 FT /product="coat protein" XX SQ Sequence 1215 BP; 415 A; 222 C; 273 G; 305 T; 0 other; ttaccctgat ctcctgcacg aaattcggaa gttctatcaa tggcttttgg aacaagctcc 60 gtacaacatg atagcccaaa gtggaaaagc accttacata gcggagacag ctcttaagaa 120 gttatttacc aatattgatg caagtgaagt agagttggag aaatactatg aagtgtatct 180 ggatattgag aatgaagaag taactcagag cgaagttcgc tatcaggcag gtgaaggaga 240 agatgcagct gcacaatcaa gcacgtcaaa acaagttaca aagcaaaagg ataaagatgt 300 tgacactggc actaccggta agtttgaaat cccgagaatt aaagtgttgt ctgataaaat 360 gagatttcca aaggttggca aaaacgttgt actcaatgca gaacatttgt tggcgtataa 420 accagatcaa attgaactat acaacacaag gtcgacaaag cagcaatttg agaattggta 480 taatgctata aagaaggagt acgacgtcaa tgatgaacaa atgaagattt tactgaatgg 540 tttaatggtt tggtgcattg agaatggaac atccccaaat ttatcaggaa attggactat 600 gatggatggt gacgaacaag tcgagtatcc attagcacca atcgttgata atgcaaaacc 660 aacattcagg caaataatgg cgcatttcag tgatgcagct gaggcataca ttgaatacag 720 gaacgccacg gaaaaataca tgccccggta tggacttcag cgcaatttaa cagaacttag 780 tttagcacgt tacgcattcg atttttacga aatgacttca aagactccca agcgagcgaa 840 agaagcacac atgcaaatga aggcggctgc ggttagaggg gcaactaatc gtttgtttgg 900 cctggatggt aacgtaaaca caacagaaga ggacacggaa agacacacag ctgcagatat 960 taataagaac caccacccgt tccccggtat caagatgtga acctccgttg ttgcctttag 1020 ttttatatat atatatagtt atataaaacc gtatgtaata tgtaattctc ttcattccgt 1080 tcaacctgcc ttcgaacaac ggaatgtggt gtaccactag ttgtggcgaa cgatacggtt 1140 gaacatctgt gattaatgtt gaccttcatg agagtgatgt atcacgaggt gaatctttcc 1200 gtgaattacg gagac 1215 // ID AB000840; SV 1; linear; genomic RNA; STD; VRL; 1215 BP. XX AC AB000840; XX DT 11-FEB-1998 (Rel. 54, Created) DT 16-JAN-2009 (Rel. 99, Last updated, Version 5) XX DE Onion yellow dwarf virus NIb gene for polyprotein, partial cds. XX KW . XX OS Onion yellow dwarf virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-1215 RA Sumi S.; RT ; RL Submitted (03-FEB-1997) to the INSDC. RL Contact:Shin-ichiro Sumi Wakunaga Pharmaceutical Co., Ltd., Institute for RL Biotechnology Research; 1624 Shimokotachi, Koda-Cho, Takata-Gun, Hiroshima RL 739-11, Japan XX RN [2] RX DOI; 10.1007/s007050050271. RX PUBMED; 9505969. RA Tsuneyoshi T., Matsumi T., Natsuaki K.T., Sumi S.; RT "Nucleotide sequence analysis of virus isolates indicates the presence of RT three potyvirus species in Allium plants"; RL Arch. Virol. 143(1):97-113(1998). XX DR MD5; bd9ea4de1a8ff146e0c4944b8f926e8a. XX FH Key Location/Qualifiers FH FT source 1..1215 FT /organism="Onion yellow dwarf virus" FT /mol_type="genomic RNA" FT /isolation_source="garlic" FT /clone="Gzm" FT /db_xref="taxon:43130" FT CDS <1..1000 FT /codon_start=2 FT /transl_table=1 FT /gene="NIb" FT /product="polyprotein" FT /db_xref="GOA:O55508" FT /db_xref="InterPro:IPR001592" FT /db_xref="UniProtKB/TrEMBL:O55508" FT /protein_id="BAA24788.1" FT /translation="YPDLVHEIRKFYQWLLEQAPYNMIAQDGKAPYIAETALKKLFTDI FT DASEAELEQYYAMYLTLEDQEHIIKEVRYQAGDTEDAAAQSSDARRIAKQKDKDVDAGT FT TGKFTVPRIKALSDKMRFPKVGKNVVLNAEHLLAYKPEQIELYNTRATQRQFENWFMAV FT KKEYDVDDEQMKILLDGLMVWCIENGTSPNLSGNWTMMDGDEQIEYPLAPVLDNAKPTF FT RQIMAHFSDAAEAYIEYRNATEKYMPRYGIQRNLTELSLARYAFDFYEMTSKTPKRAKE FT AHMQMKAAAVRGATNRLFGLDGNVNTTEEDTERHTAADVNKNQHTLLGIKM" FT mat_peptide <1..226 FT /product="RNA-dependent RNA polymerase" FT /note="C-terminal portion" FT mat_peptide <227..997 FT /product="coat protein" XX SQ Sequence 1215 BP; 414 A; 223 C; 283 G; 295 T; 0 other; ttatcccgac ttggtgcacg aaataaggaa attttatcag tggttgctag aacaagctcc 60 gtataatatg atagcgcaag atggtaaggc tccgtacata gcagagacag ctcttaagaa 120 gctatttact gacatcgacg cgagtgaggc cgaacttgaa caatattatg cgatgtatct 180 aacacttgaa gatcaagaac acattattaa ggaagttcga taccaagctg gagatacaga 240 agatgctgca gcacaatcaa gtgatgcaag gcgaatcgca aagcagaaag ataaggatgt 300 tgatgctgga acaactggaa aattcacagt acctagaatc aaagcactct ccgataaaat 360 gcgatttccc aaagttggca agaatgtagt actcaatgcg gagcatctat tagcgtataa 420 accagaacaa atagagctat acaatacgag agcgacacaa cgccaattcg agaattggtt 480 tatggcagtg aagaaggagt acgacgtgga cgatgaacaa atgaaaattt tactggatgg 540 gctaatggtt tggtgcattg aaaatggtac atctccgaac ctgtcaggta attggactat 600 gatggatggt gatgaacaaa ttgagtatcc attagcacca gttttagata atgctaaacc 660 aacgtttaga cagataatgg cgcacttcag tgatgcagct gaagcataca ttgaataccg 720 aaacgccacc gaaaaataca tgccccggta tggaattcag cgcaatttaa cagaattgag 780 tttagcacgt tacgcattcg acttttatga aatgacttcg aaaactccta agcgagcgaa 840 agaagcacat atgcaaatga aggcggcagc agttagaggg gcaactaatc gcttgtttgg 900 cctggatggt aacgtaaaca ccacagaaga ggacacggaa agacacacgg cggcagatgt 960 gaataaaaat cagcacacgt tgctgggcat caagatgtaa catcgcacca atgtgtctct 1020 agtcttatat aaatatatct atgtaagaac gtatgtaata tgtaattctc ttcgtttcgt 1080 ttaacctgac tttgagcagt aaaatgtggt gtaccactag ctgtggcaaa cgatacggtt 1140 aaacatctgt gattaatgtt gagcttcatg agggtggttt cccacgaggt gaatcttagc 1200 gtgaattaca gagac 1215 // ID AB000841; SV 1; linear; genomic RNA; STD; VRL; 1215 BP. XX AC AB000841; XX DT 11-FEB-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 4) XX DE Onion yellow dwarf virus RNA for polyprotein, partial cds. XX KW coat protein; RNA-dependent RNA polymerase. XX OS Onion yellow dwarf virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-1215 RA Sumi S.; RT ; RL Submitted (03-FEB-1997) to the INSDC. RL Shin-ichiro Sumi, Wakunaga Pharmaceutical Co., Ltd., Institute for RL Biotechnology Research; 1624 Shimokotachi, Koda-Cho, Takata-Gun, Hiroshima RL 739-11, Japan (E-mail:sumi_s@wakunaga.co.jp, Tel:+81-826-45-2331, RL Fax:+81-826-45-4351) XX RN [2] RX DOI; 10.1007/s007050050271. RX PUBMED; 9505969. RA Tsuneyoshi T., Matsumi T., Natsuaki K.T., Sumi S.; RT "Nucleotide sequence analysis of virus isolates indicates the presence of RT three potyvirus species in Allium plants"; RL Arch. Virol. 143(1):97-113(1998). XX DR MD5; 69ae4e74217898a67bde82aceb35728a. XX FH Key Location/Qualifiers FH FT source 1..1215 FT /organism="Onion yellow dwarf virus" FT /mol_type="genomic RNA" FT /db_xref="taxon:43130" FT CDS <1..1000 FT /codon_start=2 FT /transl_table=1 FT /gene="NIb" FT /product="polyprotein" FT /db_xref="GOA:O55509" FT /db_xref="InterPro:IPR001592" FT /db_xref="UniProtKB/TrEMBL:O55509" FT /protein_id="BAA24789.1" FT /translation="YPDLLHEIRKFYQWLLEQAPYNMIAQSGKAPYIAETALKKLFTNI FT DASEVELEKYYEVYLDIENEEVTQSEVRYQAGEGEDAAAQSSTSKQVTKQKDKDVDTGT FT TGKFEIPRIKVLSDKMRFPKVGKNVVLNAEHLLAYKPDQIELYNTRSTKQQFENWYNAI FT KKEYDVNDEQMKILLNGLMVWCIENGTSPNLSGNWTMMDGDEQVEYPLAPIVDNAKPTF FT RQIMAHFSDAAEAYIEYRNATEKYMPRYGLQRNLTELSLARYAFDFYEMTSKTPKRAKE FT AHMQMKAAAVRGATNRLFGLDGNVNTTEEDTERHTAADINKNQHTLLGIKM" FT mat_peptide <1..226 FT /product="RNA-dependent RNA polymerase" FT /note="C-terminal portion" FT mat_peptide <227..997 FT /product="coat protein" XX SQ Sequence 1215 BP; 417 A; 213 C; 280 G; 305 T; 0 other; ttaccctgat ctcctgcacg aaattcggaa gttctatcaa tggcttttgg aacaagctcc 60 gtacaacatg atagcccaaa gtggaaaagc accttacata gcggagacag ctcttaagaa 120 gttatttacc aatattgatg caagtgaagt agagttggag aaatactatg aagtgtatct 180 ggatattgag aatgaagaag taactcagag cgaagttcgc tatcaggcag gtgaaggaga 240 agatgcagct gcacaatcaa gcacgtcaaa acaagtcaca aagcaaaagg ataaagatgt 300 tgacactggc actaccggta agtttgaaat cccgagaatt aaagtgttgt ctgataaaat 360 gagatttcca aaggttggca aaaacgttgt actcaatgca gaacatttgt tggcgtataa 420 accagatcaa attgaactat acaacacaag gtcgacaaag cagcaatttg agaattggta 480 taatgctata aagaaggagt acgacgtcaa tgatgaacaa atgaagattt tactgaatgg 540 tttaatggtt tggtgcattg agaatggaac atccccaaat ttatcaggaa attggactat 600 gatggatggt gacgaacaag tcgagtatcc attagcacca atcgttgata atgcaaaacc 660 aacattcagg caaataatgg cgcatttcag tgatgcagct gaggcataca ttgaatacag 720 gaacgccacg gaaaaataca tgccccggta tggacttcag cgcaatttaa cagaacttag 780 tttagcacgt tacgcattcg atttttacga aatgacttca aagactccca agcgagcgaa 840 agaagcacac atgcaaatga aggcggctgc ggttagaggg gcaactaatc gtttgtttgg 900 cctggatggt aacgtaaaca caacagaaga ggacacggaa agacacacag ctgcagatat 960 taataagaac cagcacacgt tgctcggtat caagatgtga atctgcgttg ttgtctttag 1020 ttttatatat atatatagtt atataaaaac gtatgtaata tgtaatccgc ttcatttcgt 1080 tcaacctgac ttcgagcaac ggaatgtggt gtaccactag ttgtggcgaa cgatacggtt 1140 gaacatctgt gattaatgtc gagcttcatg agagtgatgt atcacgaggt gaatctttgc 1200 gtgaattacg gagac 1215 // ID AB000842; SV 1; linear; genomic RNA; STD; VRL; 1200 BP. XX AC AB000842; XX DT 11-FEB-1998 (Rel. 54, Created) DT 16-JAN-2009 (Rel. 99, Last updated, Version 5) XX DE Welsh onion yellow stripe virus NIb gene for polyprotein (RNA polymerasse DE and coat protein), partial cds. XX KW . XX OS Welsh onion yellow stripe virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-1200 RA Sumi S.; RT ; RL Submitted (03-FEB-1997) to the INSDC. RL Contact:Shin-ichiro Sumi Wakunaga Pharmaceutical Co., Ltd., Institute for RL Biotechnology Research; 1624 Shimokotachi, Koda-Cho, Takata-Gun, Hiroshima RL 739-11, Japan XX RN [2] RX DOI; 10.1007/s007050050271. RX PUBMED; 9505969. RA Tsuneyoshi T., Matsumi T., Natsuaki K.T., Sumi S.; RT "Nucleotide sequence analysis of virus isolates indicates the presence of RT three potyvirus species in Allium plants"; RL Arch. Virol. 143(1):97-113(1998). XX DR MD5; 2a7a6ac4acc9ee4e0a8bac1f896e1ee4. XX FH Key Location/Qualifiers FH FT source 1..1200 FT /organism="Welsh onion yellow stripe virus" FT /mol_type="genomic RNA" FT /isolation_source="shallot" FT /clone="Si-1" FT /db_xref="taxon:62060" FT CDS <1..1003 FT /codon_start=2 FT /transl_table=1 FT /gene="NIb" FT /product="polyprotein" FT /db_xref="GOA:O55510" FT /db_xref="InterPro:IPR001592" FT /db_xref="UniProtKB/TrEMBL:O55510" FT /protein_id="BAA24790.1" FT /translation="YDELLHEIRLFYKWVLEQAPYNLIAQTGKAPYIAETALKRLYMDE FT QVTESELEKYSRLYQILDERIPTPSYVSYQAIETEDAANVNTDKQVGKNKDKDKDVDVG FT TSGEFSVPKVKMLSDKMRLPRIGKKVILNGKHLLSYKPDQIDLYNTRATHAQFKTWYEA FT VKLEYELTDEQMRIVMNGLMVWCIENGTSQNLTGVWTMMDGDNQMEYPLSPIVDNAKPT FT FRQIMAHFSDAAEAYIEYRNATEKYMPRYGLQRNLREYSLARYAFDFYEMNSKTPIRAK FT EAHMQMKAAAVRGAANRMFGLDGNIGTDDENTERHTAADVNKDHHTLLGLRM" FT mat_peptide <1..226 FT /product="RNA-dependent RNA polymerase" FT /note="C-terminal portion" FT mat_peptide 227..1000 FT /product="coat protein" XX SQ Sequence 1200 BP; 410 A; 208 C; 284 G; 298 T; 0 other; ttacgatgaa ttgctacacg aaatcagatt attttataag tgggtgttag agcaagcacc 60 gtacaatcta atagcgcaaa caggaaaagc tccgtatata gcagagacgg cattgaagag 120 attatatatg gatgagcaag taacagagag tgaacttgag aagtatagcc gactatacca 180 gattttggat gagcgcatac caacaccaag ttatgtttcg tatcaagcaa tagaaacaga 240 agacgctgcg aatgtaaaca ccgacaagca agtcggaaag aacaaggata aggataaaga 300 tgttgatgtc ggcacgtcag gtgagttttc agtgccaaag gtgaaaatgt tatcagataa 360 aatgcgtttg ccacgaattg gaaagaaggt gatactcaac ggcaaacatc ttttatctta 420 taaacctgat caaattgatt tgtataacac acgagccaca cacgcacagt tcaaaacgtg 480 gtacgaggcg gtgaaactag aatatgaatt gacggatgaa caaatgagaa tagtcatgaa 540 tggtctgatg gtgtggtgca ttgagaatgg cacatcacaa aatttgacgg gggtttggac 600 gatgatggat ggcgacaacc aaatggagta cccactcagt cctattgttg ataatgcaaa 660 acccacattt agacaaataa tggcacattt cagtgacgca gctgaagcgt acattgaata 720 taggaatgcc acagaaaaat acatgcctcg gtatggactt cagcgaaatt taagagaata 780 cagcctagca cgttacgcat tcgactttta tgagatgaat tcaaagacgc cgatccgcgc 840 gaaggaagct catatgcaga tgaaagcggc agcggttaga ggggcagcta accgtatgtt 900 tggcttggat ggtaacatag gcaccgatga tgagaacaca gaacgacata cagcagctga 960 tgtgaataag gatcatcaca cgctgctcgg tcttcgtatg taataaacat atatatattt 1020 aatatatagt gtcgtgcatt atctttcgtt atatttgaat atgagcaaac atagtgtggt 1080 taaaccaccg tttgtggcat agtatatgat ataacttcgc tagcattatt tgcaccataa 1140 gactcagtgt ggtggtacca cgataaaata gtcgagtgtt gtacgttttg ctagagagac 1200 // ID AB000843; SV 1; linear; genomic RNA; STD; VRL; 1210 BP. XX AC AB000843; XX DT 11-FEB-1998 (Rel. 54, Created) DT 16-JAN-2009 (Rel. 99, Last updated, Version 5) XX DE Onion yellow dwarf virus NIb gene for polyprotein (RNA polymerase and coat DE protein), partial cds. XX KW . XX OS Onion yellow dwarf virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-1210 RA Sumi S.; RT ; RL Submitted (03-FEB-1997) to the INSDC. RL Contact:Shin-ichiro Sumi Wakunaga Pharmaceutical Co., Ltd., Institute for RL Biotechnology Research; 1624 Shimokotachi, Koda-Cho, Takata-Gun, Hiroshima RL 739-11, Japan XX RN [2] RX DOI; 10.1007/s007050050271. RX PUBMED; 9505969. RA Tsuneyoshi T., Matsumi T., Natsuaki K.T., Sumi S.; RT "Nucleotide sequence analysis of virus isolates indicates the presence of RT three potyvirus species in Allium plants"; RL Arch. Virol. 143(1):97-113(1998). XX DR MD5; bff695fe96309a994239276208297df0. XX FH Key Location/Qualifiers FH FT source 1..1210 FT /organism="Onion yellow dwarf virus" FT /mol_type="genomic RNA" FT /isolation_source="shallot" FT /clone="Si-2G" FT /db_xref="taxon:43130" FT CDS <1..1000 FT /codon_start=2 FT /transl_table=1 FT /gene="NIb" FT /product="polyprotein" FT /db_xref="GOA:O55511" FT /db_xref="InterPro:IPR001592" FT /db_xref="UniProtKB/TrEMBL:O55511" FT /protein_id="BAA24791.1" FT /translation="YPDLVHEIRKFYQWLLEQAPYSMIAQSGQAPYIAETALRKLYTNV FT DASERELEKYYEVYLNLENEETVSKEVRYQAGGSEDAAAQPSTSKQISKQKDRDVDAGT FT TGKFSVPKIKALSDKMRFPKVGQLVVLNAEHLLTYKPEQIELYNTRATQRQFESWYTAI FT KTEYDVNDEQMKIILNGLMVWCIENGTSPNLSGTWTMMDGDEQVEYPLAPILDNAKPTF FT RQIMAHFSDAAEAYIEYRNATEKYMPRYGLQRNLTELSLARYAFDFYEMTSKTPKRAKE FT AHMQMKAAAVRGATNRLFGLDGNVNTTEEDTERHTAADINKNQHTLLGIRM" FT mat_peptide <1..226 FT /product="RNA-dependent RNA polymerase" FT /note="C-terminal portion" FT mat_peptide 227..997 FT /product="coat protein" XX SQ Sequence 1210 BP; 399 A; 230 C; 284 G; 297 T; 0 other; ctatcctgat cttgtgcatg aaatacgaaa attctaccaa tggttactgg agcaggctcc 60 ttacagtatg atagcacaaa gtgggcaagc gccatacata gcggaaacag ctcttagaaa 120 gctatacact aatgttgacg cgagcgaacg tgaattggaa aaatactatg aagtctactt 180 aaaccttgag aatgaagaaa cagtctctaa agaggtgcga tatcaagcag ggggtagtga 240 agatgcagca gctcaaccaa gtacgtcaaa gcagatatca aaacagaagg atagggatgt 300 cgacgcaggc actacaggta agttttcggt gcccaagata aaagcgctat ctgataaaat 360 gcgatttccg aaagtcgggc aacttgttgt gctcaatgcc gaacatttgt taacatataa 420 gcccgaacaa atcgaattgt acaacacaag ggcaacacaa cgccaatttg agagttggta 480 cacggccatt aagacagaat acgatgtcaa tgatgagcag atgaaaatta tattaaatgg 540 tttaatggtc tggtgtattg aaaatggcac ttctccaaac ctgtcaggaa cctggactat 600 gatggatgga gatgagcaag ttgaataccc actagcaccg attttagaca atgcaaaacc 660 tacgtttagg cagattatgg cgcatttcag tgatgcagct gaagcataca ttgaatatag 720 gaacgccacg gaaaaataca tgccccggta tggtcttcag cgaaatttaa cagaacttag 780 tttggcgcgt tacgcattcg atttttatga aatgacttca aagactccaa aacgggctaa 840 agaggcacat atgcaaatga aggcggctgc ggttagaggg gcaactaacc gcttgtttgg 900 cctggatggt aacgtcaaca cgacagaaga ggacacggaa agacacacag ctgcggacat 960 aaataagaac cagcacacgc tgcttggcat taggatgtga aaccgcacgt ttgtctttag 1020 ttttatatat ttacttatat aaaaacgtat gtaatatgta ttccttttcc ttcgtttaac 1080 ctgacttcga gcaacgaaat gtggtgtacc actagttgtg gcgaacgata cggttaaaca 1140 tctgtgatta atgtcgagct ttatgagtgt gaagtatccc gaggtgaatc ttggcgtgaa 1200 ttacagagac 1210 // ID AB000844; SV 1; linear; genomic RNA; STD; VRL; 1200 BP. XX AC AB000844; XX DT 11-FEB-1998 (Rel. 54, Created) DT 23-JAN-2009 (Rel. 99, Last updated, Version 6) XX DE Welsh onion yellow stripe virus RNA for polyprotein (RNA polymerase and DE coat protein), partial cds. XX KW . XX OS Welsh onion yellow stripe virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-1200 RA Sumi S.; RT ; RL Submitted (03-FEB-1997) to the INSDC. RL Contact:Shin-ichiro Sumi Wakunaga Pharmaceutical Co., Ltd., Institute for RL Biotechnology Research; 1624 Shimokotachi, Koda-Cho, Takata-Gun, Hiroshima RL 739-11, Japan XX RN [2] RX DOI; 10.1007/s007050050271. RX PUBMED; 9505969. RA Tsuneyoshi T., Matsumi T., Natsuaki K.T., Sumi S.; RT "Nucleotide sequence analysis of virus isolates indicates the presence of RT three potyvirus species in Allium plants"; RL Arch. Virol. 143(1):97-113(1998). XX DR MD5; 69f4e9b92a691050477723eec6705a89. XX FH Key Location/Qualifiers FH FT source 1..1200 FT /organism="Welsh onion yellow stripe virus" FT /mol_type="genomic RNA" FT /isolation_source="shallot" FT /clone="Si-2N" FT /db_xref="taxon:62060" FT CDS <1..1003 FT /codon_start=2 FT /transl_table=1 FT /gene="NIb" FT /product="polyprotein" FT /db_xref="GOA:O55512" FT /db_xref="InterPro:IPR001592" FT /db_xref="UniProtKB/TrEMBL:O55512" FT /protein_id="BAA24792.1" FT /translation="YDELLHEIRLFYKWVLEQAPYNLIAQTGKAPYIAETALKRLYMDE FT QVTESELEKYSRLYQILDERIPTPSYVSYQAIETEDAANVNTDKQVGKNKDKDKDVDVG FT TSGEFSVPKVKMLSDKMRLPRIGKKVILNGKHLLSYKPDQIDLYNTRATHAQFKTWYEA FT VKLEYELTDEQMRIVMNGLMVWCIENGTSQNLTGVWTMMDGDNQMEYPLSPIVDNAKPT FT FRQIMAHFSDAAEAYIEYRNATEKYMPRYGLQRNLREYSLARYAFDFYEMNSKTPIRAK FT EAHMQMKAAAVRGAANRMFGLDGNIGTDDENTERHTAADVNKDHHTLLGLRM" FT mat_peptide <1..226 FT /product="RNA-dependent RNA polymerase" FT /note="C-terminal portion" FT mat_peptide 227..1000 FT /product="coat protein" XX SQ Sequence 1200 BP; 411 A; 208 C; 284 G; 297 T; 0 other; ttacgatgaa ttgctacacg aaatcagatt attttataag tgggtgttag agcaagcacc 60 gtacaatcta atagcgcaaa caggaaaagc tccgtatata gcagagacgg cattgaagag 120 attatatatg gatgagcaag taacagagag tgaacttgag aagtatagcc gactatacca 180 gattttggat gagcgcatac caacaccaag ttatgtatcg tatcaagcaa tagaaacaga 240 agacgctgcg aatgtaaaca ccgacaagca agtcggaaag aacaaggata aggataaaga 300 tgttgatgtc ggcacgtcag gtgagttttc agtgccaaag gtgaaaatgt tatcagataa 360 aatgcgtttg ccacgaattg gaaagaaggt gatactcaac ggcaaacatc ttttatctta 420 taaacctgat caaattgatt tgtataacac acgagccaca cacgcacagt tcaaaacgtg 480 gtacgaggcg gtgaaactag aatatgaatt gacggatgaa caaatgagaa tagtcatgaa 540 tggtctgatg gtgtggtgca ttgagaatgg cacatcacaa aatttgacgg gggtttggac 600 gatgatggat ggcgacaacc aaatggagta cccactcagt cctattgttg ataatgcaaa 660 acccacattt agacaaataa tggcacattt cagtgacgca gctgaagcgt acattgaata 720 taggaatgcc acagaaaaat acatgcctcg gtatggactt cagcgaaatt taagagaata 780 cagcctagca cgttacgcat tcgactttta tgagatgaat tcaaagacgc cgatccgcgc 840 gaaggaagct catatgcaga tgaaagcggc agcggttaga ggggcagcta accgtatgtt 900 tggcttggat ggtaacatag gcaccgatga tgagaacaca gaacgacata cagcagctga 960 tgtgaataag gatcatcaca cgctgctcgg tcttcgtatg taataaacat atatatattt 1020 aatatatagt gtcgtgcatt atctttcgtt atatttgaat atgagcaaac atagtgtggt 1080 taaaccaccg tttgtggcat agtatatgat ataacttcgc tagcattatt tgcaccataa 1140 gactcagtgt ggtggtacca cgataaaata gtcgagtgtt gtacgttttg ctagagagac 1200 // ID AB000845; SV 1; linear; genomic RNA; STD; VRL; 1211 BP. XX AC AB000845; XX DT 11-FEB-1998 (Rel. 54, Created) DT 16-JAN-2009 (Rel. 99, Last updated, Version 5) XX DE Onion yellow dwarf virus NIb gene for polyprotein (RNA polymerase and coat DE protein), partial cds. XX KW . XX OS Onion yellow dwarf virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-1211 RA Sumi S.; RT ; RL Submitted (03-FEB-1997) to the INSDC. RL Contact:Shin-ichiro Sumi Wakunaga Pharmaceutical Co., Ltd., Institute for RL Biotechnology Research; 1624 Shimokotachi, Koda-Cho, Takata-Gun, Hiroshima RL 739-11, Japan XX RN [2] RX DOI; 10.1007/s007050050271. RX PUBMED; 9505969. RA Tsuneyoshi T., Matsumi T., Natsuaki K.T., Sumi S.; RT "Nucleotide sequence analysis of virus isolates indicates the presence of RT three potyvirus species in Allium plants"; RL Arch. Virol. 143(1):97-113(1998). XX DR MD5; 95c31e37b065308a493909274e4908af. XX FH Key Location/Qualifiers FH FT source 1..1211 FT /organism="Onion yellow dwarf virus" FT /mol_type="genomic RNA" FT /isolation_source="shallot" FT /clone="Si-4" FT /db_xref="taxon:43130" FT CDS <1..1000 FT /codon_start=2 FT /transl_table=1 FT /gene="NIb" FT /product="polyprotein" FT /db_xref="GOA:O55513" FT /db_xref="InterPro:IPR001592" FT /db_xref="UniProtKB/TrEMBL:O55513" FT /protein_id="BAA24793.1" FT /translation="YPDLVHEIRKFYQWLLEQAPYSMIAQSGQAPYIAETALRKLYTNV FT DASEGELEKYYEVYLSLENEETVLKEVRYQAGSSEDTAAQPSTSKQIAKQKDKDVDAGT FT TGKFSVPKIKALSDKMRFPKVGRLVVLNAEHLLTYKPEQIELYNTRATQRQFESWYTAI FT KTEYDVNDEQMKIILNGLMVWCIENGTSPNLSGSWTMMDGDEQVEYPLAPILDNAKPTF FT RQIMAHFSDAAEAYIEYRNATERYMPRYGLQRNLTELSLARYAFDFYEMTSKTPKRAKE FT AHMQMKAAAVRGATNRLFGLDGNVNTTEEDTERHTAADINKNQHTLLGIRM" FT mat_peptide <1..226 FT /product="RNA-dependent RNA polymerase" FT /note="C-terminal portion" FT mat_peptide 227..997 FT /product="coat protein" XX SQ Sequence 1211 BP; 406 A; 223 C; 285 G; 297 T; 0 other; ttatcctgat cttgtgcatg aaatacggaa gttctaccaa tggttactgg agcaggctcc 60 ttacagtatg atagcacaga gtgggcaagc accatacata gcagagacag ctctcagaaa 120 gctatacacc aatgttgatg cgagtgaggg cgaattagaa aaatactatg aggtttattt 180 aagccttgag aatgaagaaa cagtcttaaa agaagtgcga tatcaagcag gaagtagtga 240 agacacagca gctcaaccaa gtacgtcaaa gcagatagcg aaacagaaag ataaagatgt 300 cgatgcagga accacaggta aattttcggt gcccaagatc aaagcattat ctgataaaat 360 gcgattccca aaagtcgggc gacttgtagt gctcaatgcc gaacatttgt taacatacaa 420 gcccgaacaa attgaattat acaacacaag ggctacacaa cgccaatttg agagttggta 480 cacagccatt aagacggagt atgacgtcaa tgatgagcaa atgaaaatta tattgaatgg 540 tttaatggtc tggtgtattg agaatggtac atcaccaaat ttgtcaggat cctggactat 600 gatggatgga gatgagcaag ttgaatatcc actagcaccg attctagaca atgcaaaacc 660 aacgtttaga cagattatgg cgcatttcag tgatgcagct gaagcataca ttgaatatag 720 aaacgccacg gaaagataca tgccccggta tggtcttcag cgaaatttaa cagaactcag 780 tttggctcgt tacgcattcg atttttatga aatgacctca aagactccga agcgagctaa 840 agaggcgcac atgcaaatga aggcggctgc ggttagaggg gcaactaatc gcttgtttgg 900 cctggatggt aacgtcaaca caacagaaga ggacacggaa agacacacag ctgcggacat 960 aaataagaac cagcacacgc tgctgggcat taggatgtaa taccgcatgt ttgtctttag 1020 ttttatatat ttatatatat aagaacgtaa gtaatatgta ttccttttcg cttcgtttaa 1080 tctgacttcg agcaacgaaa tgtggtgtac cactagttgt ggcgaacgat acggttaaac 1140 atctgtgatt aatgtcgagc tctatgagtg tgaagtatca cgaggtggat cttggcgtga 1200 attacagaga c 1211 // ID AB000851; SV 1; linear; genomic RNA; STD; VRL; 858 BP. XX AC AB000851; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 4) XX DE Akabane virus genomic RNA, viral-complementary sequence of S RNA segment, DE complete sequence. XX KW . XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-858 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; cafe29d9b92678c41bb37223ee23c45c. DR EuropePMC; PMC1235861; 16188988. DR EuropePMC; PMC2443122; 18554406. DR EuropePMC; PMC3634354; 22411100. DR EuropePMC; PMC5526858; 28628828. XX FH Key Location/Qualifiers FH FT source 1..858 FT /organism="Akabane virus" FT /segment="S" FT /strain="OBE-1" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 34..735 FT /codon_start=1 FT /product="nucleocapsid" FT /db_xref="GOA:O57283" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O57283" FT /protein_id="BAA24201.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGVKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKANQIKFAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFGSVAQISWAKSGFSPAA FT RAFLAQFGIQI" FT CDS 59..334 FT /codon_start=1 FT /product="nonstructual protein" FT /db_xref="GOA:O55514" FT /db_xref="InterPro:IPR000797" FT /db_xref="UniProtKB/TrEMBL:O55514" FT /protein_id="BAA24202.1" FT /translation="MFHNGMQLHLIRMQGMWHLSVSMGSSSTLLLLESSSSTRRRPRWS FT YIRRHNQVSILLLQGSNLQWLITIFPSTLQIQCQTLPLRFTASRAT" XX SQ Sequence 858 BP; 213 A; 189 C; 201 G; 255 T; 0 other; agtagtgaac tccactatta actacgcatt gcaatggcaa atcaattcat tttcaacgat 60 gttccacaac ggaatgcagc tacatttaat ccggatgcag ggtatgtggc atttatcagt 120 aagtatgggc agcagctcaa ctttactgtt gctagagtct tcttcctcaa ccagaagaag 180 gccaagatgg tcttacataa gacgccacaa ccaagtgtcg atcttacttt tgcaggggtc 240 aaatttacag tggttaataa ccattttccc cagtacactg caaatccagt gtcagacact 300 gcctttacgc ttcaccgcat ctcgggctac ttagctcgct gggttgctga gcagtgcaag 360 gctaatcaga tcaaatttgc agaggcagct gccacaattg tgatgccact ggctgaggtg 420 aagggttgca cttggagtga cgggtatgca atgtacctgg gatttgcccc tggtgctgag 480 atgtttctgg aaacctttga gttttaccca ctggttatcg acatgcaccg tgtgataaag 540 gatggaatgg atgtcaactt catgaggaag gtcttacgtc agaggtatgg gcagctgact 600 gcagaagagt ggatgacatc taagttggac gcagtcaagg ctgcatttgg ctcagttgcc 660 caaatatcct gggctaaatc tggcttctca cctgcagcta gagctttcct ggctcaattt 720 ggtatccaga tctaagctta actgattctc cagttttttc ttttttctct tcctaagtgc 780 accatgtcta tgtggtgcac acctttgttc agctgcttgg attttattgt ttatagttaa 840 ttagtggagc acactact 858 // ID AB000852; SV 1; linear; genomic RNA; STD; VRL; 702 BP. XX AC AB000852; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Akabane virus RNA for nucleoprotein, complete cds. XX KW nucleoprotein. XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-702 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; b796f1f59d9ebd9d8fe99da2bef57f2e. XX FH Key Location/Qualifiers FH FT source 1..702 FT /organism="Akabane virus" FT /strain="JaGAr39" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 1..702 FT /codon_start=1 FT /transl_table=1 FT /product="nucleoprotein" FT /db_xref="GOA:O57283" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O57283" FT /protein_id="BAA24203.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGVKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKANQIKFAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFGSVAQISWAKSGFSPAA FT RAFLAQFGIQI" XX SQ Sequence 702 BP; 176 A; 158 C; 178 G; 190 T; 0 other; atggcaaatc aattcatttt caacgatgtt ccacaacgga atgcagctac atttaatccg 60 gatgcagggt atgtggcatt tatcagtaag tatgggcagc agctcaactt tactgttgct 120 agagtcttct tcctcaacca gaagaaggcc aagatggtct tacataagac gccacaacca 180 agtgtcgatc ttacttttgc aggggtcaaa tttacagtgg ttaataacca ttttccccag 240 tacactgcaa atccagtgtc agacactgcc tttacgctcc atcgcatctc gggctactta 300 gctcgctggg ttgctgagca gtgcaaggct aatcagatca aatttgcaga ggcagctgcc 360 acaattgtga tgccgctggc tgaggtgaag ggttgcacct ggagtgacgg gtatgcaatg 420 tacctgggat ttgcccctgg tgctgagatg tttctggaaa cctttgagtt ttacccactg 480 gttatcgaca tgcaccgtgt gataaaggat gggatggatg tcaacttcat gaggaaggtc 540 ttacgccaga ggtatgggca gctgactgca gaagagtgga tgacatctaa gttggacgca 600 gtcaaggctg catttggctc agttgcccag atatcctggg ctaaatctgg cttctcacct 660 gcagctagag ctttcctggc tcaatttggt atccagatct aa 702 // ID AB000853; SV 1; linear; genomic RNA; STD; VRL; 702 BP. XX AC AB000853; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Akabane virus RNA for nucleoprotein, complete cds. XX KW nucleoprotein. XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-702 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; 6b15d851823bccc2348e4aae5d8aff40. XX FH Key Location/Qualifiers FH FT source 1..702 FT /organism="Akabane virus" FT /strain="B8935" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 1..702 FT /codon_start=1 FT /transl_table=1 FT /product="nucleoprotein" FT /db_xref="GOA:O55515" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O55515" FT /protein_id="BAA24204.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKHGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGVKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKSNQIKLAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVVKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAYGSVAQISWAKSGFSPAA FT RAFLAQFGIQI" XX SQ Sequence 702 BP; 182 A; 161 C; 172 G; 187 T; 0 other; atggcaaacc aatttatttt caacgatgtt ccacaacgga atgcagctac atttaacccg 60 gatgcagggt atgtggcatt tatcagtaag catgggcagc agctcaactt tactgttgct 120 agagtcttct tcctcaacca gaagaaggcc aagatggtct tacataagac gccacaacca 180 agtgtcgatc ttacttttgc aggggtcaaa tttacagtgg ttaataacca ttttccccag 240 tacactgcaa atccggtgtc agacactgcc tttacgctcc atcgcatctc aggctactta 300 gctcgctggg ttgctgagca gtgcaagtcc aaccagatca aacttgctga agcagctgcc 360 acaattgtga tgcctctggc tgaggtgaag ggctgcacct ggagtgatgg gtatgcaatg 420 tatttaggat ttgccccagg tgctgaaatg ttcctggaaa cttttgaatt ttacccactg 480 gttatcgaca tgcaccgtgt ggtgaaggat ggaatggatg tcaactttat gaggaaagta 540 ctacgccaga gatatgggca gttaactgct gaggagtgga tgacatcaaa gttggacgca 600 gtcaaagctg catacggctc agttgcccag atatcctggg ctaagtctgg cttctcacct 660 gcagctagag ctttcctggc ccagtttggt atccagatct aa 702 // ID AB000854; SV 1; linear; genomic RNA; STD; VRL; 702 BP. XX AC AB000854; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Akabane virus RNA for nucleoprotein, complete cds. XX KW nucleoprotein. XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-702 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; 3cabafdb819b4a84b73df6fa8b72ae01. DR EuropePMC; PMC2443122; 18554406. XX FH Key Location/Qualifiers FH FT source 1..702 FT /organism="Akabane virus" FT /strain="R7949" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 1..702 FT /codon_start=1 FT /transl_table=1 FT /product="nucleoprotein" FT /db_xref="GOA:O55516" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O55516" FT /protein_id="BAA24205.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKHGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGVKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKANQIKLAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVVKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAYGSVAQISWAKSGFSPAA FT RAFLAQFGIQI" XX SQ Sequence 702 BP; 181 A; 161 C; 174 G; 186 T; 0 other; atggcaaacc aatttatttt caacgatgtt ccacaacgga atgcagctac atttaacccg 60 gatgcagggt atgtggcatt tatcagtaag catgggcagc agctcaactt tactgttgct 120 agagtcttct tcctcaacca gaagaaggcc aagatggtct tacataagac gccacaacca 180 agtgtcgatc ttacttttgc aggggtcaaa tttacagtgg ttaataacca ttttccccag 240 tacactgcaa atccggtgtc agacactgcc tttacgctcc atcgcatctc aggctactta 300 gctcgctggg ttgctgagca gtgcaaggcc aaccagatca aacttgctga agcagctgcc 360 acaattgtga tgcctctggc tgaggtgaag ggctgcacct ggagtgatgg gtatgcaatg 420 tatttaggat ttgccccagg tgctgaaatg ttcctggaaa cttttgaatt ttacccactg 480 gttatcgaca tgcaccgtgt ggtgaaggat ggaatggatg tcaactttat gaggaaagtg 540 ctacgccaga gatatgggca gttaactgct gaggagtgga tgacatcaaa gttggacgca 600 gtcaaagctg catacggctc agttgcccag atatcctggg ctaagtctgg cttctcacct 660 gcagctagag ctttcctggc ccagtttggt atccagatct aa 702 // ID AB000855; SV 1; linear; genomic RNA; STD; VRL; 702 BP. XX AC AB000855; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Akabane virus RNA for nucleoprotein, complete cds. XX KW nucleoprotein. XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-702 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; b817e16cff41c9e2cc23048c5f3a7acc. XX FH Key Location/Qualifiers FH FT source 1..702 FT /organism="Akabane virus" FT /strain="NBE-9" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 1..702 FT /codon_start=1 FT /transl_table=1 FT /product="nucleoprotein" FT /db_xref="GOA:O57283" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O57283" FT /protein_id="BAA24206.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGVKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKANQIKFAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFGSVAQISWAKSGFSPAA FT RAFLAQFGIQI" XX SQ Sequence 702 BP; 179 A; 157 C; 175 G; 191 T; 0 other; atggcaaatc aattcatttt caacgatgtt ccacaacgga atgcagctac atttaatccg 60 gatgcagggt atgtggcatt tatcagtaag tatgggcagc agctcaactt tactgttgct 120 agagtcttct tcctcaacca gaagaaggcc aagatggtct tacataagac gccacaacca 180 agtgtcgatc ttacttttgc aggggtcaaa tttacagtgg ttaataacca ttttccccag 240 tacactgcaa atccagtgtc agacactgcc tttacgcttc accgcatctc gggctactta 300 gctcgctggg ttgctgagca gtgcaaggct aatcagatca aatttgcaga ggcagctgcc 360 acaattgtga tgccactggc tgaggtgaag ggttgcacct ggagtgacgg gtatgcaatg 420 tacctgggat ttgcccctgg tgctgagatg tttctggaaa cctttgagtt ttacccactg 480 gttatcgaca tgcaccgtgt gataaaggat ggaatggatg tcaacttcat gaggaaggtc 540 ttacgtcaga ggtatgggca gctgactgca gaagagtgga tgacatctaa gttggacgca 600 gtcaaggctg catttggctc agttgcccaa atatcctggg ctaaatctgg cttctcacct 660 gcagctagag ctttcctggc tcaatttggt atccagatct aa 702 // ID AB000856; SV 1; linear; genomic RNA; STD; VRL; 702 BP. XX AC AB000856; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Akabane virus RNA for nucleoprotein, complete cds. XX KW nucleoprotein. XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-702 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; b817e16cff41c9e2cc23048c5f3a7acc. XX FH Key Location/Qualifiers FH FT source 1..702 FT /organism="Akabane virus" FT /strain="SAB74" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 1..702 FT /codon_start=1 FT /transl_table=1 FT /product="nucleoprotein" FT /db_xref="GOA:O57283" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O57283" FT /protein_id="BAA24207.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGVKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKANQIKFAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFGSVAQISWAKSGFSPAA FT RAFLAQFGIQI" XX SQ Sequence 702 BP; 179 A; 157 C; 175 G; 191 T; 0 other; atggcaaatc aattcatttt caacgatgtt ccacaacgga atgcagctac atttaatccg 60 gatgcagggt atgtggcatt tatcagtaag tatgggcagc agctcaactt tactgttgct 120 agagtcttct tcctcaacca gaagaaggcc aagatggtct tacataagac gccacaacca 180 agtgtcgatc ttacttttgc aggggtcaaa tttacagtgg ttaataacca ttttccccag 240 tacactgcaa atccagtgtc agacactgcc tttacgcttc accgcatctc gggctactta 300 gctcgctggg ttgctgagca gtgcaaggct aatcagatca aatttgcaga ggcagctgcc 360 acaattgtga tgccactggc tgaggtgaag ggttgcacct ggagtgacgg gtatgcaatg 420 tacctgggat ttgcccctgg tgctgagatg tttctggaaa cctttgagtt ttacccactg 480 gttatcgaca tgcaccgtgt gataaaggat ggaatggatg tcaacttcat gaggaaggtc 540 ttacgtcaga ggtatgggca gctgactgca gaagagtgga tgacatctaa gttggacgca 600 gtcaaggctg catttggctc agttgcccaa atatcctggg ctaaatctgg cttctcacct 660 gcagctagag ctttcctggc tcaatttggt atccagatct aa 702 // ID AB000857; SV 1; linear; genomic RNA; STD; VRL; 702 BP. XX AC AB000857; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Akabane virus RNA for nucleoprotein, complete cds. XX KW nucleoprotein. XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-702 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; 1638171e214c2dc406772c7cf9003998. DR EuropePMC; PMC2443122; 18554406. XX FH Key Location/Qualifiers FH FT source 1..702 FT /organism="Akabane virus" FT /strain="KT3377" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 1..702 FT /codon_start=1 FT /transl_table=1 FT /product="nucleoprotein" FT /db_xref="GOA:O57283" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O57283" FT /protein_id="BAA24208.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGVKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKANQIKFAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFGSVAQISWAKSGFSPAA FT RAFLAQFGIQI" XX SQ Sequence 702 BP; 179 A; 156 C; 175 G; 192 T; 0 other; atggcaaatc aattcatttt caacgatgtt ccacaacgga atgcagctac atttaatccg 60 gatgcagggt atgtggcatt tatcagtaag tatgggcagc agctcaactt tactgttgct 120 agagtcttct tcctcaacca gaagaaggcc aagatggtct tacataagac gccacaacca 180 agtgtcgatc ttacttttgc aggggtcaaa tttacagtgg ttaataacca ttttccccag 240 tacactgcaa atccagtgtc agacactgcc tttacgcttc accgcatctc gggctactta 300 gctcgctggg ttgctgagca gtgcaaggct aatcaaatca aatttgcaga ggcagctgcc 360 acaattgtga tgccactggc tgaggtgaag ggttgcacct ggagtgacgg gtatgcaatg 420 tacctgggat ttgcccctgg tgctgagatg tttctggaaa cctttgagtt ttacccactg 480 gttatcgaca tgcaccgtgt gataaaggat ggaatggatg tcaacttcat gaggaaggtc 540 ttacgtcaga ggtatgggca gctgactgca gaagagtgga tgacatctaa gttggacgca 600 gtcaaggctg catttggctc agttgcccag atatcctggg ctaaatctgg cttctcacct 660 gcagctagag cttttctggc tcaatttggt atccagatct aa 702 // ID AB000858; SV 1; linear; genomic RNA; STD; VRL; 722 BP. XX AC AB000858; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Akabane virus RNA for nucleoprotein, complete cds. XX KW nucleoprotein. XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-722 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; 2a0f8ebaa7013b7ebc4257d6f17bb247. XX CC Sequence updated (22-Dec-1997) XX FH Key Location/Qualifiers FH FT source 1..722 FT /organism="Akabane virus" FT /strain="M171" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 16..717 FT /codon_start=1 FT /transl_table=1 FT /product="nucleoprotein" FT /db_xref="GOA:O57283" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O57283" FT /protein_id="BAA24209.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGVKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKANQIKFAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFGSVAQISWAKSGFSPAA FT RAFLAQFGIQI" XX SQ Sequence 722 BP; 185 A; 162 C; 178 G; 197 T; 0 other; taactacgca ttgcaatggc aaatcaattc attttcaacg atgttccaca acggaatgca 60 gctacattta atccggatgc agggtatgtg gcatttatca gtaagtatgg gcagcagctc 120 aactttactg ttgctagagt cttcttcctc aaccagaaga aggccaagat ggtcttacat 180 aagacgccac aaccaagtgt cgatcttact tttgcagggg tcaaatttac agtggttaat 240 aaccattttc cccagtacac tgcaaatcca gtgtcagaca ctgcctttac gcttcaccgc 300 atctcgggct acttagctcg ctgggttgct gagcagtgca aggctaatca gatcaaattt 360 gcagaggcag ctgccacaat tgtgatgcca ctggctgagg tgaagggttg cacctggagt 420 gacgggtatg caatgtacct gggatttgcc cctggtgctg agatgtttct ggaaaccttt 480 gagttttacc cactggttat cgacatgcac cgtgtgataa aggatggaat ggatgtcaac 540 ttcatgagga aggtcttacg tcagaggtat gggcagctga ctgcagaaga gtggatgaca 600 tctaagttgg acgcagtcaa ggctgcattt ggctcagttg cccaaatatc ctgggctaaa 660 tctggcttct cacctgcagc tagagctttc ctggctcaat ttggtatcca gatctaagct 720 ta 722 // ID AB000859; SV 1; linear; genomic RNA; STD; VRL; 702 BP. XX AC AB000859; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Akabane virus RNA for nucleoprotein, complete cds. XX KW nucleoprotein. XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-702 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; 95a6f8b566218d9a9bf642d6a4d9f888. XX FH Key Location/Qualifiers FH FT source 1..702 FT /organism="Akabane virus" FT /strain="KM-29X82" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 1..702 FT /codon_start=1 FT /transl_table=1 FT /product="nucleoprotein" FT /db_xref="GOA:O57280" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O57280" FT /protein_id="BAA24210.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGVKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKANQIKFAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFSSVAQISWAKSGFSPAA FT RAFLAQFGIQI" XX SQ Sequence 702 BP; 177 A; 156 C; 176 G; 193 T; 0 other; atggcaaatc aattcatttt caacgatgtt ccacaacgga atgcagctac atttaatccg 60 gatgcagggt atgtggcatt tatcagtaag tatgggcagc agctcaactt tactgttgct 120 agagtcttct tcctcaacca gaagaaggcc aagatggtct tacataagac gccacaacca 180 agtgtcgatc ttacttttgc aggggttaaa tttacagtgg ttaataacca ttttccccag 240 tacactgcaa atccagtgtc agacactgcc tttacgctcc atcgcatctc gggctactta 300 gctcgctggg ttgctgagca gtgcaaggct aatcagatca aatttgccga ggcagctgcc 360 acaattgtga tgccgctggc tgaagtgaag ggttgcacct ggagtgacgg gtatgcaatg 420 tacctaggat ttgcccctgg tgctgagatg tttttggaaa cctttgagtt ttacccactg 480 gttattgaca tgcaccgtgt gataaaggat gggatggatg tcaacttcat gaggaaggtc 540 ttgcgccaga ggtatgggca gttgactgca gaagagtgga tgacatctaa gttggacgca 600 gtcaaggctg catttagctc agttgcccag atatcctggg ccaaatctgg cttctcacct 660 gcagctagag ctttcctggc tcaatttggt atccagatct aa 702 // ID AB000860; SV 1; linear; genomic RNA; STD; VRL; 702 BP. XX AC AB000860; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Akabane virus RNA for nucleoprotein, complete cds. XX KW nucleoprotein. XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-702 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; 9380cbeb4b86b45d2928131955a0ee6b. XX FH Key Location/Qualifiers FH FT source 1..702 FT /organism="Akabane virus" FT /strain="KC-12X84" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 1..702 FT /codon_start=1 FT /transl_table=1 FT /product="nucleoprotein" FT /db_xref="GOA:O55517" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O55517" FT /protein_id="BAA24211.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGVKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKANQIKFAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFNSVAQISWAKSGFSPAA FT RAFLAQFGIQI" XX SQ Sequence 702 BP; 179 A; 158 C; 175 G; 190 T; 0 other; atggcaaatc aattcatttt caacgatgtt ccacaacgga atgcagctac atttaatccg 60 gatgcagggt atgtggcatt tatcagtaag tatgggcagc agctcaactt tactgttgct 120 agagtcttct tcctcaacca gaagaaggcc aagatggtct tacataagac gccacaacca 180 agtgtcgatc ttacttttgc aggggtcaaa tttacagtgg ttaataacca ttttccccag 240 tatactgcaa atccagtgtc agacactgcc tttacgctcc atcgcatctc gggctactta 300 gctcgctggg ttgctgagca gtgcaaggct aatcagatca aatttgcaga ggcagctgct 360 acaattgtga tgccgctggc tgaagtgaag ggttgcacct ggagtgacgg gtatgcaatg 420 tacctagggt ttgcccctgg tgctgagatg tttctggaaa cctttgagtt ttacccactg 480 gttatcgaca tgcaccgtgt gataaaggat gggatggatg tcaacttcat gaggaaggtc 540 ttacgccaga ggtatgggca gctgactgca gaggaatgga tgacatctaa gttggacgca 600 gtcaaggctg catttaactc agtcgcccag atatcctggg ccaaatctgg cttctcacct 660 gcagctagag ctttcctggc tcaatttggt atccagatct aa 702 // ID AB000861; SV 1; linear; genomic RNA; STD; VRL; 702 BP. XX AC AB000861; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Akabane virus RNA for nucleoprotein, complete cds. XX KW nucleoprotein. XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-702 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; 07a18ecef6e9a7c5a4ca9745aea48b42. XX FH Key Location/Qualifiers FH FT source 1..702 FT /organism="Akabane virus" FT /strain="KC-15X84" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 1..702 FT /codon_start=1 FT /transl_table=1 FT /product="nucleoprotein" FT /db_xref="GOA:O57280" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O57280" FT /protein_id="BAA24212.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGVKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKANQIKFAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFSSVAQISWAKSGFSPAA FT RAFLAQFGIQI" XX SQ Sequence 702 BP; 177 A; 157 C; 177 G; 191 T; 0 other; atggcaaatc aattcatttt caacgatgtt ccacaacgga atgcagctac atttaatccg 60 gatgcagggt atgtggcatt tatcagtaag tatgggcagc agctcaactt tactgttgct 120 agagtcttct tcctcaacca gaagaaggcc aagatggtct tacataagac gccacaacca 180 agtgtcgatc ttacttttgc aggggttaaa tttacagtgg ttaataacca ttttccccag 240 tatactgcaa atccagtgtc agacactgcc tttacgctcc atcgcatctc gggctactta 300 gctcgctggg ttgctgagca gtgcaaggcc aatcagatca aatttgcaga ggcagctgcc 360 acaattgtga tgccgctggc tgaggtgaag ggttgcactt ggagtgacgg gtatgcaatg 420 tacctagggt ttgcccctgg tgctgagatg tttctggaaa cctttgagtt ttacccactg 480 gttatcgaca tgcaccgtgt gataaaggat gggatggatg tcaacttcat gaggaaggtc 540 ttacgccaga ggtatgggca gctgactgca gaggaatgga tgacatctaa gttggacgca 600 gtcaaggctg catttagctc agttgcccag atatcctggg ccaaatctgg cttctcacct 660 gcagctagag ctttcctggc tcaatttggt atccagatct aa 702 // ID AB000862; SV 1; linear; genomic RNA; STD; VRL; 702 BP. XX AC AB000862; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Akabane virus RNA for nucleoprotein, complete cds. XX KW nucleoprotein. XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-702 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; 9335006a7ee705b039b8bfb2077241c4. XX FH Key Location/Qualifiers FH FT source 1..702 FT /organism="Akabane virus" FT /strain="KC-04Y84" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 1..702 FT /codon_start=1 FT /transl_table=1 FT /product="nucleoprotein" FT /db_xref="GOA:O57280" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O57280" FT /protein_id="BAA24213.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGVKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKANQIKFAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFSSVAQISWAKSGFSPAA FT RAFLAQFGIQI" XX SQ Sequence 702 BP; 178 A; 157 C; 176 G; 191 T; 0 other; atggcaaatc aattcatttt caacgatgtt ccacaacgga atgcagctac atttaatccg 60 gatgcagggt atgtggcatt tatcagtaag tatgggcagc agctcaactt tactgttgct 120 agagtcttct tcctcaacca gaagaaggcc aagatggtct tacataagac gccacaacca 180 agtgtcgatc ttacttttgc aggggtcaaa tttacagtgg ttaataacca ttttccccag 240 tatactgcaa atccagtgtc agacactgcc tttacgctcc atcgcatctc gggctactta 300 gctcgctggg ttgctgagca gtgcaaggct aatcagatca aatttgcaga ggcagctgct 360 acaattgtga tgccgctggc tgaagtgaag ggttgcacct ggagtgacgg gtatgcaatg 420 tacctagggt ttgcccctgg tgctgagatg tttctggaaa cctttgagtt ttacccactg 480 gttatcgaca tgcaccgtgt gataaaggat gggatggatg tcaacttcat gaggaaggtc 540 ttacgccaga ggtatgggca gctgactgca gaggaatgga tgacatctaa gttggacgca 600 gtcaaggctg catttagctc agttgcccag atatcctggg ccaaatctgg cttctcacct 660 gcagctagag ctttcctggc tcaatttggt atccagatct aa 702 // ID AB000863; SV 1; linear; genomic RNA; STD; VRL; 702 BP. XX AC AB000863; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Akabane virus RNA for nucleoprotein, complete cds. XX KW nucleoprotein. XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-702 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; 7217f2c38b111a123c7ffdb475893409. DR EuropePMC; PMC2443122; 18554406. XX FH Key Location/Qualifiers FH FT source 1..702 FT /organism="Akabane virus" FT /strain="Iriki" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 1..702 FT /codon_start=1 FT /transl_table=1 FT /product="nucleoprotein" FT /db_xref="GOA:O57280" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O57280" FT /protein_id="BAA24214.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGVKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKANQIKFAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFSSVAQISWAKSGFSPAA FT RAFLAQFGIQI" XX SQ Sequence 702 BP; 178 A; 156 C; 176 G; 192 T; 0 other; atggcaaatc aattcatttt caatgatgtt ccacaacgga atgcagctac atttaatccg 60 gatgcagggt atgtggcatt tatcagtaag tatgggcagc agctcaactt tactgttgct 120 agagtcttct tcctcaacca gaagaaggcc aagatggtct tacataagac gccacaacca 180 agtgtcgatc ttacttttgc aggggtcaaa tttacagtgg ttaataacca ttttccccag 240 tatactgcaa atccagtgtc agacactgcc tttacgctcc atcgcatctc gggctactta 300 gctcgctggg ttgctgagca gtgcaaggcc aatcagatca aatttgcaga ggcagctgcc 360 acaattgtga tgccgctggc tgaggtgaag ggttgcactt ggagtgacgg gtatgcaatg 420 tacctagggt ttgcccctgg tgctgagatg tttctggaaa cctttgagtt ttacccactg 480 gttattgaca tgcaccgtgt gataaaggat gggatggatg tcaacttcat gaggaaggtc 540 ttacgccaga ggtatggaca gctgactgca gaggaatgga tgacatctaa gttggacgca 600 gtcaaggctg catttagctc agttgcccag atatcctggg ccaaatctgg cttctcacct 660 gcagctagag ctttcctggc tcaatttggt atccagatct aa 702 // ID AB000864; SV 1; linear; genomic RNA; STD; VRL; 702 BP. XX AC AB000864; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Akabane virus RNA for nucleoprotein, complete cds. XX KW nucleoprotein. XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-702 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; 96882488165baae26c642fec29dbaa3c. DR EuropePMC; PMC2443122; 18554406. XX FH Key Location/Qualifiers FH FT source 1..702 FT /organism="Akabane virus" FT /strain="NS-88-1" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 1..702 FT /codon_start=1 FT /transl_table=1 FT /product="nucleoprotein" FT /db_xref="GOA:O57283" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O57283" FT /protein_id="BAA24215.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGVKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKANQIKFAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFGSVAQISWAKSGFSPAA FT RAFLAQFGIQI" XX SQ Sequence 702 BP; 182 A; 158 C; 172 G; 190 T; 0 other; atggcaaatc aattcatttt caacgatgtt ccacaacgga atgcagctac atttaatccg 60 gatgcagggt atgtggcatt tatcagtaag tatgggcagc agctcaactt tactgttgct 120 agagtcttct tcctcaacca gaagaaggcc aagatggtct tacataagac gccacaacca 180 agtgtcgatc ttacttttgc aggggtcaaa tttacagtgg ttaataacca ttttccccag 240 tacactgcaa atccagtgtc agacactgcc tttacgcttc accgcatctc gggctactta 300 gctcgctggg ttgctgagca gtgcaaggct aatcagatca aatttgcaga ggcagctgcc 360 acaattgtga tgccactggc tgaggtgaag ggttgcacct ggagtgatgg gtatgcaatg 420 tacctgggat ttgcccctgg tgctgagatg tttctggaaa cctttgagtt ttacccactg 480 gtcatcgaca tgcaccgtgt gataaaagat ggaatggatg tcaacttcat gagaaaggtc 540 ttacgccaga ggtatgggca gctgactgca gaagaatgga tgacatctaa gttggacgca 600 gtcaaggctg catttggctc agttgcccaa atatcctggg ctaaatctgg cttctcacct 660 gcagctagag ctttcctggc tcaatttggt atccagatct aa 702 // ID AB000865; SV 1; linear; genomic RNA; STD; VRL; 702 BP. XX AC AB000865; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Akabane virus RNA for nucleoprotein, complete cds. XX KW nucleoprotein. XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-702 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; 96882488165baae26c642fec29dbaa3c. XX FH Key Location/Qualifiers FH FT source 1..702 FT /organism="Akabane virus" FT /strain="NS-88-2" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 1..702 FT /codon_start=1 FT /transl_table=1 FT /product="nucleoprotein" FT /db_xref="GOA:O57283" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O57283" FT /protein_id="BAA24216.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGVKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKANQIKFAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFGSVAQISWAKSGFSPAA FT RAFLAQFGIQI" XX SQ Sequence 702 BP; 182 A; 158 C; 172 G; 190 T; 0 other; atggcaaatc aattcatttt caacgatgtt ccacaacgga atgcagctac atttaatccg 60 gatgcagggt atgtggcatt tatcagtaag tatgggcagc agctcaactt tactgttgct 120 agagtcttct tcctcaacca gaagaaggcc aagatggtct tacataagac gccacaacca 180 agtgtcgatc ttacttttgc aggggtcaaa tttacagtgg ttaataacca ttttccccag 240 tacactgcaa atccagtgtc agacactgcc tttacgcttc accgcatctc gggctactta 300 gctcgctggg ttgctgagca gtgcaaggct aatcagatca aatttgcaga ggcagctgcc 360 acaattgtga tgccactggc tgaggtgaag ggttgcacct ggagtgatgg gtatgcaatg 420 tacctgggat ttgcccctgg tgctgagatg tttctggaaa cctttgagtt ttacccactg 480 gtcatcgaca tgcaccgtgt gataaaagat ggaatggatg tcaacttcat gagaaaggtc 540 ttacgccaga ggtatgggca gctgactgca gaagaatgga tgacatctaa gttggacgca 600 gtcaaggctg catttggctc agttgcccaa atatcctggg ctaaatctgg cttctcacct 660 gcagctagag ctttcctggc tcaatttggt atccagatct aa 702 // ID AB000866; SV 1; linear; genomic RNA; STD; VRL; 702 BP. XX AC AB000866; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 4) XX DE Akabane virus RNA for nucleoprotein, complete cds. XX KW nucleoprotein. XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-702 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; 23e3a235fa1ca4ed3913fedfc696229a. XX FH Key Location/Qualifiers FH FT source 1..702 FT /organism="Akabane virus" FT /strain="YG-88-2" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 1..702 FT /codon_start=1 FT /transl_table=1 FT /product="nucleoprotein" FT /db_xref="GOA:O57279" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O57279" FT /protein_id="BAA24217.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGIKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKANQIKFAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFSSVAQISWAKSGFSPAA FT RAFLAQFGIQI" XX SQ Sequence 702 BP; 179 A; 156 C; 174 G; 193 T; 0 other; atggcaaatc aattcatttt caacgatgtt ccacaacgga atgcagctac atttaatccg 60 gatgcagggt atgtggcatt tatcagtaag tatgggcagc agctcaactt tactgttgct 120 agagtcttct tcctcaacca gaagaaggcc aagatggtct tacataagac gccacaacca 180 agtgtcgatc ttacttttgc agggattaaa tttacagtgg ttaataacca ttttccccag 240 tacactgcaa atccagtgtc agacactgcc tttacgctcc atcgcatctc gggctactta 300 gctcgctggg ttgctgagca gtgcaaggct aatcagatca aatttgccga ggcagctgcc 360 acaattgtga tgccgctggc tgaagtgaag ggttgcacct ggagtgacgg gtatgcaatg 420 tacctaggat ttgcccctgg tgctgagatg tttttggaaa cctttgagtt ttacccactg 480 gttattgaca tgcaccgtgt gataaaggat gggatggatg tcaacttcat gaggaaggtc 540 ttgcgccaga ggtatgggca gttgactgca gaagagtgga tgacatctaa gttggacgca 600 gtcaaagctg catttagctc agttgcccag atatcctggg ccaaatctgg cttctcacct 660 gcagctagag ctttcctggc tcaatttggt atccagatct aa 702 // ID AB000867; SV 1; linear; genomic RNA; STD; VRL; 702 BP. XX AC AB000867; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Akabane virus RNA for nucleoprotein, complete cds. XX KW nucleoprotein. XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-702 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; 9dda43a26d0dff5316f196d9b1bd5734. DR EuropePMC; PMC2443122; 18554406. XX FH Key Location/Qualifiers FH FT source 1..702 FT /organism="Akabane virus" FT /strain="ON-89-2" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 1..702 FT /codon_start=1 FT /transl_table=1 FT /product="nucleoprotein" FT /db_xref="GOA:O55518" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O55518" FT /protein_id="BAA24218.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFL FT NQKKAKMVLHKTSQPSVDLTFAGVKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKANQIKFAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFGSVAQISWAKSGFSPAA FT RAFLAQFGIQI" XX SQ Sequence 702 BP; 183 A; 157 C; 171 G; 191 T; 0 other; atggcaaatc aattcatttt caacgatgtt ccacaacgga atgcagctac atttaatccg 60 gatgcagggt atgtggcatt tatcagtaag tatgggcagc agctcaactt tactgttgct 120 agagtcttct tcctcaacca gaagaaagcc aagatggtct tacataagac gtcacaacca 180 agtgtcgatc ttacttttgc aggggtcaaa tttacagtgg ttaataacca ttttccccag 240 tacactgcaa atccagtgtc agacactgcc tttacgcttc accgcatctc gggctactta 300 gctcgctggg ttgctgagca gtgcaaggct aatcagatca aatttgcaga ggcagctgcc 360 acaattgtga tgccactggc tgaggtgaag ggttgcacct ggagtgatgg gtatgcaatg 420 tacctgggat ttgcccctgg tgctgagatg tttctggaaa cctttgagtt ttacccactg 480 gtcatcgaca tgcaccgtgt gataaaagat ggaatggatg tcaacttcat gagaaaggtc 540 ttacgccaga ggtatgggca gctgactgca gaagaatgga tgacatctaa gttggacgca 600 gtcaaggctg catttggctc agttgcccaa atatcctggg ctaaatctgg cttctcacct 660 gcagctagag ctttcctggc tcaatttggt atccagatct aa 702 // ID AB000868; SV 1; linear; genomic RNA; STD; VRL; 722 BP. XX AC AB000868; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Akabane virus RNA for nucleoprotein, complete cds. XX KW nucleoprotein. XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-722 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; c96a4ca3c298c356a31e25f5a20b5f0e. XX CC Sequence updated (22-Dec-1997) XX FH Key Location/Qualifiers FH FT source 1..722 FT /organism="Akabane virus" FT /strain="MZ-90-1" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 16..717 FT /codon_start=1 FT /transl_table=1 FT /product="nucleoprotein" FT /db_xref="GOA:O57279" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O57279" FT /protein_id="BAA24219.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGIKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKANQIKFAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFSSVAQISWAKSGFSPAA FT RAFLAQFGIQI" XX SQ Sequence 722 BP; 185 A; 160 C; 177 G; 200 T; 0 other; taactacgca ttgcaatggc aaatcaattc attttcaacg atgttccaca acggaatgca 60 gctacattta atccggatgc agggtatgtg gcatttatca gtaagtatgg gcagcagctc 120 aactttactg ttgctagagt cttcttcctc aaccagaaga aggccaagat ggtcttacat 180 aagacgccac aaccaagtgt cgatcttact tttgcaggga ttaaatttac agtggttaat 240 aaccattttc cccagtacac tgcaaatcca gtgtcagaca ctgcctttac gctccatcgc 300 atctcgggct acttagctcg ctgggttgct gagcagtgca aggctaatca gatcaaattt 360 gccgaggcag ctgccacaat tgtgatgccg ctggctgaag tgaagggttg cacctggagt 420 gacgggtatg caatgtacct aggatttgcc cctggtgctg agatgttttt ggaaaccttt 480 gagttttacc cactggttat tgacatgcac cgtgtgataa aggatgggat ggatgtcaac 540 ttcatgagga aggtcttgcg ccagaggtat gggcagttga ctgcagaaga gtggatgaca 600 tctaagttgg acgcagtcaa agctgcattt agctcagttg cccagatatc ctgggctaaa 660 tctggcttct cacctgcagc tagagctttc ctggctcaat ttggtatcca gatctaagct 720 ta 722 // ID AB000869; SV 1; linear; genomic RNA; STD; VRL; 722 BP. XX AC AB000869; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Akabane virus RNA for nucleoprotein, complete cds. XX KW nucleoprotein. XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-722 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; c96a4ca3c298c356a31e25f5a20b5f0e. XX CC Sequence updated (22-Dec-1997) XX FH Key Location/Qualifiers FH FT source 1..722 FT /organism="Akabane virus" FT /strain="MZ-90-2" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 16..717 FT /codon_start=1 FT /transl_table=1 FT /product="nucleoprotein" FT /db_xref="GOA:O57279" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O57279" FT /protein_id="BAA24220.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGIKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKANQIKFAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFSSVAQISWAKSGFSPAA FT RAFLAQFGIQI" XX SQ Sequence 722 BP; 185 A; 160 C; 177 G; 200 T; 0 other; taactacgca ttgcaatggc aaatcaattc attttcaacg atgttccaca acggaatgca 60 gctacattta atccggatgc agggtatgtg gcatttatca gtaagtatgg gcagcagctc 120 aactttactg ttgctagagt cttcttcctc aaccagaaga aggccaagat ggtcttacat 180 aagacgccac aaccaagtgt cgatcttact tttgcaggga ttaaatttac agtggttaat 240 aaccattttc cccagtacac tgcaaatcca gtgtcagaca ctgcctttac gctccatcgc 300 atctcgggct acttagctcg ctgggttgct gagcagtgca aggctaatca gatcaaattt 360 gccgaggcag ctgccacaat tgtgatgccg ctggctgaag tgaagggttg cacctggagt 420 gacgggtatg caatgtacct aggatttgcc cctggtgctg agatgttttt ggaaaccttt 480 gagttttacc cactggttat tgacatgcac cgtgtgataa aggatgggat ggatgtcaac 540 ttcatgagga aggtcttgcg ccagaggtat gggcagttga ctgcagaaga gtggatgaca 600 tctaagttgg acgcagtcaa agctgcattt agctcagttg cccagatatc ctgggctaaa 660 tctggcttct cacctgcagc tagagctttc ctggctcaat ttggtatcca gatctaagct 720 ta 722 // ID AB000870; SV 1; linear; genomic RNA; STD; VRL; 702 BP. XX AC AB000870; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Akabane virus RNA for nucleoprotein, complete cds. XX KW nucleoprotein. XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-702 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; b796f1f59d9ebd9d8fe99da2bef57f2e. XX FH Key Location/Qualifiers FH FT source 1..702 FT /organism="Akabane virus" FT /strain="FO-90-3" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 1..702 FT /codon_start=1 FT /transl_table=1 FT /product="nucleoprotein" FT /db_xref="GOA:O57283" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O57283" FT /protein_id="BAA24221.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGVKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKANQIKFAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFGSVAQISWAKSGFSPAA FT RAFLAQFGIQI" XX SQ Sequence 702 BP; 176 A; 158 C; 178 G; 190 T; 0 other; atggcaaatc aattcatttt caacgatgtt ccacaacgga atgcagctac atttaatccg 60 gatgcagggt atgtggcatt tatcagtaag tatgggcagc agctcaactt tactgttgct 120 agagtcttct tcctcaacca gaagaaggcc aagatggtct tacataagac gccacaacca 180 agtgtcgatc ttacttttgc aggggtcaaa tttacagtgg ttaataacca ttttccccag 240 tacactgcaa atccagtgtc agacactgcc tttacgctcc atcgcatctc gggctactta 300 gctcgctggg ttgctgagca gtgcaaggct aatcagatca aatttgcaga ggcagctgcc 360 acaattgtga tgccgctggc tgaggtgaag ggttgcacct ggagtgacgg gtatgcaatg 420 tacctgggat ttgcccctgg tgctgagatg tttctggaaa cctttgagtt ttacccactg 480 gttatcgaca tgcaccgtgt gataaaggat gggatggatg tcaacttcat gaggaaggtc 540 ttacgccaga ggtatgggca gctgactgca gaagagtgga tgacatctaa gttggacgca 600 gtcaaggctg catttggctc agttgcccag atatcctggg ctaaatctgg cttctcacct 660 gcagctagag ctttcctggc tcaatttggt atccagatct aa 702 // ID AB000871; SV 1; linear; genomic RNA; STD; VRL; 702 BP. XX AC AB000871; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Akabane virus RNA for nucleoprotein, complete cds. XX KW nucleoprotein. XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-702 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; 23e3a235fa1ca4ed3913fedfc696229a. XX FH Key Location/Qualifiers FH FT source 1..702 FT /organism="Akabane virus" FT /strain="FO-90-4" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 1..702 FT /codon_start=1 FT /transl_table=1 FT /product="nucleoprotein" FT /db_xref="GOA:O57279" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O57279" FT /protein_id="BAA24222.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGIKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKANQIKFAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFSSVAQISWAKSGFSPAA FT RAFLAQFGIQI" XX SQ Sequence 702 BP; 179 A; 156 C; 174 G; 193 T; 0 other; atggcaaatc aattcatttt caacgatgtt ccacaacgga atgcagctac atttaatccg 60 gatgcagggt atgtggcatt tatcagtaag tatgggcagc agctcaactt tactgttgct 120 agagtcttct tcctcaacca gaagaaggcc aagatggtct tacataagac gccacaacca 180 agtgtcgatc ttacttttgc agggattaaa tttacagtgg ttaataacca ttttccccag 240 tacactgcaa atccagtgtc agacactgcc tttacgctcc atcgcatctc gggctactta 300 gctcgctggg ttgctgagca gtgcaaggct aatcagatca aatttgccga ggcagctgcc 360 acaattgtga tgccgctggc tgaagtgaag ggttgcacct ggagtgacgg gtatgcaatg 420 tacctaggat ttgcccctgg tgctgagatg tttttggaaa cctttgagtt ttacccactg 480 gttattgaca tgcaccgtgt gataaaggat gggatggatg tcaacttcat gaggaaggtc 540 ttgcgccaga ggtatgggca gttgactgca gaagagtgga tgacatctaa gttggacgca 600 gtcaaagctg catttagctc agttgcccag atatcctggg ccaaatctgg cttctcacct 660 gcagctagag ctttcctggc tcaatttggt atccagatct aa 702 // ID AB000872; SV 1; linear; genomic RNA; STD; VRL; 702 BP. XX AC AB000872; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Akabane virus RNA for nucleoprotein, complete cds. XX KW nucleoprotein. XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-702 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; 23e3a235fa1ca4ed3913fedfc696229a. XX FH Key Location/Qualifiers FH FT source 1..702 FT /organism="Akabane virus" FT /strain="KS-90-2" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 1..702 FT /codon_start=1 FT /transl_table=1 FT /product="nucleoprotein" FT /db_xref="GOA:O57279" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O57279" FT /protein_id="BAA24223.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGIKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKANQIKFAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFSSVAQISWAKSGFSPAA FT RAFLAQFGIQI" XX SQ Sequence 702 BP; 179 A; 156 C; 174 G; 193 T; 0 other; atggcaaatc aattcatttt caacgatgtt ccacaacgga atgcagctac atttaatccg 60 gatgcagggt atgtggcatt tatcagtaag tatgggcagc agctcaactt tactgttgct 120 agagtcttct tcctcaacca gaagaaggcc aagatggtct tacataagac gccacaacca 180 agtgtcgatc ttacttttgc agggattaaa tttacagtgg ttaataacca ttttccccag 240 tacactgcaa atccagtgtc agacactgcc tttacgctcc atcgcatctc gggctactta 300 gctcgctggg ttgctgagca gtgcaaggct aatcagatca aatttgccga ggcagctgcc 360 acaattgtga tgccgctggc tgaagtgaag ggttgcacct ggagtgacgg gtatgcaatg 420 tacctaggat ttgcccctgg tgctgagatg tttttggaaa cctttgagtt ttacccactg 480 gttattgaca tgcaccgtgt gataaaggat gggatggatg tcaacttcat gaggaaggtc 540 ttgcgccaga ggtatgggca gttgactgca gaagagtgga tgacatctaa gttggacgca 600 gtcaaagctg catttagctc agttgcccag atatcctggg ccaaatctgg cttctcacct 660 gcagctagag ctttcctggc tcaatttggt atccagatct aa 702 // ID AB000873; SV 1; linear; genomic RNA; STD; VRL; 702 BP. XX AC AB000873; XX DT 09-JAN-1998 (Rel. 54, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Akabane virus RNA for nucleoprotein, complete cds. XX KW nucleoprotein. XX OS Akabane virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-702 RA Akashi H.; RT ; RL Submitted (04-FEB-1997) to the INSDC. RL Hiroomi Akashi, National Institute of Animal Health, Department of RL Virology; 3-1-1 Kannondai, Tsukuba, Ibaraki 305, Japan RL (E-mail:hmitsu@niah.affrc.go.jp, Tel:81-298-38-7761, Fax:81-298-38-7761) XX RN [2] RX PUBMED; 9367371. RA Akashi H., Kaku Y., Kong X.-G., Pang H.; RT "Sequence determination and phylogenetic analysis of the Akabane bunyavirus RT S RNA genome segment"; RL J. Gen. Virol. 78:2847-2851(1997). XX DR MD5; 23e3a235fa1ca4ed3913fedfc696229a. XX FH Key Location/Qualifiers FH FT source 1..702 FT /organism="Akabane virus" FT /strain="KS-90-3" FT /mol_type="genomic RNA" FT /db_xref="taxon:70566" FT CDS 1..702 FT /codon_start=1 FT /transl_table=1 FT /product="nucleoprotein" FT /db_xref="GOA:O57279" FT /db_xref="InterPro:IPR001784" FT /db_xref="UniProtKB/TrEMBL:O57279" FT /protein_id="BAA24224.1" FT /translation="MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFL FT NQKKAKMVLHKTPQPSVDLTFAGIKFTVVNNHFPQYTANPVSDTAFTLHRISGYLARWV FT AEQCKANQIKFAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPLVID FT MHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFSSVAQISWAKSGFSPAA FT RAFLAQFGIQI" XX SQ Sequence 702 BP; 179 A; 156 C; 174 G; 193 T; 0 other; atggcaaatc aattcatttt caacgatgtt ccacaacgga atgcagctac atttaatccg 60 gatgcagggt atgtggcatt tatcagtaag tatgggcagc agctcaactt tactgttgct 120 agagtcttct tcctcaacca gaagaaggcc aagatggtct tacataagac gccacaacca 180 agtgtcgatc ttacttttgc agggattaaa tttacagtgg ttaataacca ttttccccag 240 tacactgcaa atccagtgtc agacactgcc tttacgctcc atcgcatctc gggctactta 300 gctcgctggg ttgctgagca gtgcaaggct aatcagatca aatttgccga ggcagctgcc 360 acaattgtga tgccgctggc tgaagtgaag ggttgcacct ggagtgacgg gtatgcaatg 420 tacctaggat ttgcccctgg tgctgagatg tttttggaaa cctttgagtt ttacccactg 480 gttattgaca tgcaccgtgt gataaaggat gggatggatg tcaacttcat gaggaaggtc 540 ttgcgccaga ggtatgggca gttgactgca gaagagtgga tgacatctaa gttggacgca 600 gtcaaagctg catttagctc agttgcccag atatcctggg ccaaatctgg cttctcacct 660 gcagctagag ctttcctggc tcaatttggt atccagatct aa 702 // ID AB000898; SV 1; linear; mRNA; STD; VRL; 244 BP. XX AC AB000898; XX DT 22-FEB-1997 (Rel. 51, Created) DT 27-JAN-2009 (Rel. 99, Last updated, Version 4) XX DE Bovine viral diarrhea virus 1 mRNA, 5'UTR, partial sequence, strain: DE Europa. XX KW . XX OS Bovine viral diarrhea virus 1 OC Viruses; Riboviria; Flaviviridae; Pestivirus. XX RN [1] RP 1-244 RA Giangaspero M.; RT ; RL Submitted (07-FEB-1997) to the INSDC. RL Contact:Massimo Giangaspero The University of Tokyo Faculty of Medicine, RL Animal Center for Biomedical Research; Hongo 7-3-1, Bunkyo-ku, Tokyo 113, RL Japan XX RN [2] RA Giangaspero M., Harasawa R.; RT "5' UTR RNA primary and secondary structure analyses of a pestivirus strain RT isolated from human buffy coat."; RL Unpublished. XX DR MD5; 1eea1987035fb867cf6044ebd59ddd60. DR EuropePMC; PMC5796590; 29391001. DR RFAM; RF00209; IRES_Pesti. XX FH Key Location/Qualifiers FH FT source 1..244 FT /organism="Bovine viral diarrhea virus 1" FT /host="Bos taurus (Cattle)" FT /strain="Europa" FT /isolate="human buffy coat" FT /mol_type="mRNA" FT /note="synonym: Pestivirus type 1" FT /db_xref="taxon:11099" FT 5'UTR <1..>244 FT /note="located (135..378) in plus strand of RNA" FT /note="similar to Accession Number Z79770 and Z79778" XX SQ Sequence 244 BP; 61 A; 55 C; 76 G; 52 T; 0 other; gaggggtagc aacagtggtg agttcgttgg atggctgaag ccctgagtac agggtagtcg 60 tcagtggttc gacacctcgg aaagaaggtc tcgagatgcc acgtggacga gggcatgccc 120 acagcacatc ttaacctgga cgggggtcgc ccaggtcaaa gcagtttgaa taactgttat 180 ggacacagcc tgatagggtg ctgcagaggc ccactgtatt gctactaaaa atctctgctg 240 taca 244 // ID AB000906; SV 1; linear; genomic RNA; STD; VRL; 9650 BP. XX AC AB000906; XX DT 06-APR-1998 (Rel. 55, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 2) XX DE Infectious flacherie virus genomic RNA, complete sequence. XX KW polyprotein. XX OS Infectious flacherie virus OC Viruses; Riboviria; Picornavirales; Iflaviridae; Iflavirus. XX RN [1] RP 1-9650 RA Bando H.; RT ; RL Submitted (06-FEB-1997) to the INSDC. RL Hisanori Bando, Hokkaido University, Faculty of Agriculture; Kita 9 Nishi RL 9, Kita-ku, Sapporo, Hokkaido 060, Japan RL (E-mail:hban@abs.agr.hokudai.ac.jp, Tel:+81-011-706-3348, RL Fax:+81-011-706-3348) XX RN [2] RX DOI; 10.1007/s007050050273. RX PUBMED; 9505971. RA Isawa H., Asano S., Sahara K., Iizuka T., Bando H.; RT "Analysis of genetic information of an insect picorna-like virus, RT infectious flacherie virus of silkworm: evidence for evolutionary RT relationships among insect, mammalian and plant picorna(-like) viruses"; RL Arch. Virol. 143(1):127-143(1998). XX DR MD5; 5599d3e28fca3b5bd2dddee0e2fdf02a. DR EuropePMC; PMC1262566; 16227260. DR EuropePMC; PMC137002; 12163611. DR EuropePMC; PMC1472076; 16641291. DR EuropePMC; PMC3061217; 21527980. XX FH Key Location/Qualifiers FH FT source 1..9650 FT /organism="Infectious flacherie virus" FT /mol_type="genomic RNA" FT /db_xref="taxon:12742" FT CDS 157..9414 FT /codon_start=1 FT /transl_table=1 FT /product="polyprotein" FT /db_xref="GOA:O70710" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001676" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="InterPro:IPR014872" FT /db_xref="InterPro:IPR029053" FT /db_xref="InterPro:IPR033703" FT /db_xref="UniProtKB/TrEMBL:O70710" FT /protein_id="BAA25371.1" FT /translation="MQDSSCEDPGSSPPNQSVALPRESILSGVLRKNNVAECDVPKSKS FT ILKNKTTMLITMDPDTPFSKYVENAQRLVNSMVQYGYDYTVESHVRFIATRTTVTLKNG FT IFKYVIVCDGLRNVKEVNQFVNVAILVAMKKYLLYDVKRYTQPQGPPETTNTTNPEDIV FT NQTEISQQSENTEITQAVDTASAPFLLTTHVLQHQSTTEPKISLNELTERYIVIANGVL FT TSGDTRGQVKFSLDLPAAIYGNLDSSTSTALRPFTLMKTDLEITLKINSNQAQAGRYVL FT ASYPCRRQAFGVADSVFQQIQREHVEVDVSTSADAILQIKYENLRNFMPILTNEVGETT FT GESFTTLTLTCLSPVNVVAGAVDVVPYQVIARFVNPFLTGMRYPLPVQGQGPEFPISTT FT RTREKVIETVRDVNNVLGAIPVFGALYKTVMLAGASAVTSVTRFVAPEPYTKVLEDTLV FT YVGMRNKDKPVDTRPYSVLQPVSQKALCHGLGPIGATKMRLEMSVNTPHLPDMETVQTS FT ESYSELAQIGGVQEIFTVSTTTPNGRLLIDLPVAPFDARYLPNTVISGTGEGASRVLPP FT VTYISQLFQGYTGELEYEFIPVKTAAHNFSILVAFVPFDGEPGNTTFAQALSCHYKIID FT FRTNSAGVFTVPFVSNSMFRSYTGTESSFMFARNLNTTTYTSPTIGGGLTVGPFAAWKD FT PGKVSVFMLNPLNPTPIVAPEIEIIVKLRGAKNIQFTIPSQPRFRTAYTTDSYVFAPII FT SGVTNANHWGTVPQGPVQTMNDDEVPGEPTVPLIGPQMTHMEMHDDILNVNRRLMHYAR FT LTTDGLYYVDGSGATVYAPMSGSSACIPIVLSDPVFQNFGNNGQGSVNSQEMTPRNIRD FT ATASLFRFGRGSVILSILNHSQNNLVISFLPPFQRPMYFSAENGTTTSVFSLGVARTSI FT GLSAPDSQGYASVRNVPSVNPVTDIEIPFYSSAVYMDLQARNGLGAALAIMGNSQSMAR FT GPLYDVVTRTLGTLKIQTELYPFPATAENLARLQSTVTIRMGLSDDFKFHHFMGTPPVI FT ANYPLVPSIGNVARTLTRAEIEDELIRAGIESNPGPVVKDVGTEPQGMWDFLNDLVSAP FT TELKRVREQGDYFKEVIGSLKEKIVRSFNISVTQAAALASTMLAAYMNPSPYTVVSAVT FT NLLVALNIVDDTFLMKVMLGCNEPQNVKGQGPLDDDKRESPNWIVPLLVSGFVEYCCSA FT MQKQDIALDPSNIDERTVFMKLTEALTGVNWFRVSAVMVVTSRLVMAFKWLFEKVQSWL FT RPSTSYLLLKHNPKFIENFMNDYTFIMNELNKNSIIGIRQCRDRFWTTLLSAYYLKGIM FT AKERIRNPTLLNTVNDIIKKANELTSILSAPPVRFEPFVVWIFGPRGVGKSTLLQQQLI FT DILEQHKGPGKFEHPNPVYTRNPTSQWWNGYNGQPIVLYDDIGAVSSAEIDPIVAGELM FT AIKSCAIMPLEKPRIEEKESLMTSVIVGIASNHPCLKSSVIRDVGAMDRRRDILARCEF FT TPEVEKYIKSKKLLNVASALPEEMTRNNKHLRYGVFKDPTKVRPNTQDVRVETSTEPDM FT WLTYDEFMEYSIDVFTRYYTKELEKMTKRYKDMLRLCPTYAKGLTDEASVRMAIMQMIL FT KVEESKSTTTMDTLRYLIQKLEQTTPEYYKTLHKTTKEQLETINKVNTQPEGKFIIDKN FT KFDPGHWALSQVGGSRLVDYAKYIYDTLIPWHAPIYGKETVEFKDDTKCVFCKEKIDMV FT TYVCNTAKFNEHLACTCRAAAVVNDTNVVCVYCDTPMVPVFNRQPQSIYNWMAALLSAA FT KDVLYDPINSLPETWNKEKFRTNMRMLAISAVTALVMYTSINFADIVFKKSTYNAFYKY FT VGELPHKVLTVGEQVYLMTKSGVKFLLCRNQDTEFFIPAKDDVENAQGEFDVLPIEPGE FT IMDIELGGGSGFKVVGHSKKASRKAQKINREEFSKISDTASTSSDESDASAHKHEKHGV FT EFFSWLRVGEREKCQHDGAIIEKILRKRMSELSCTLDGKLVLYAVEEDETEIVLVVEKC FT CSACLLLDDRIVLKISDFFNQNSPIWKQHIDEGLLEYVPELYVKFLMECRNGANVERTV FT HNEKYSKWQNQILSQITTKFMEAVHVVWVFLTENYKMFLSGCAIIFCAYKGYKWYKNDE FT GIIEPVDPQGSYVSASQRTIRSGITRTINNSYLKGTQAHGPYLKEPNQAVLARAARIRK FT NYITMQLNSIPIWGIGLYGHTVLMTRHNWHWLKFAARTMNLDALTIMSRGSDNVVVKFS FT EVLEVLDLPEVEHVLIELPKKGLQCFSNIRTYFTKGLDEKGEATNPQLDELAYYIDVLD FT GLTLKSTAISAIGKGEPVQTTFTINSKTEDYLNSIPSQYDWIITPTQAKGMCLTAFLDK FT QGNILGFHVAGNARLRQGYVAPIFRELIPDAGIASVVTEPEGPSTENLTYMYSVIDAPY FT HTFQSKIVPSVLQSEAYDPEKEPCIQSRTDPRYTHGADPLTDGVATIGQPTKPLNDEIL FT MLAYESVRDELLGVLPPPYVQPPVSIREAITAERAPISSSMNLATSAGYPLAGRGSREK FT KKSDYILGGQLKASVHNKINKAYVQRTNGIRPPCVYWAHLKDELRPSEKLRRFGGTRVF FT SVPPLELVLNSRRFLLPFMDAFQSFPIEAHHAIGLNPNSGDWRRLRDTLLEKGPCLLQM FT DYKNYSDAIPKECVAKAFHIIVDYYRKWHCSTVEIENALKTLFLDTADAELLVYGDVFK FT VNNGVLAGHPMTSVVNSVVNLILMNYMWIKITRRRASEFFKLTYIIVMGDDVVISLPKQ FT LTEEFDCRKICAEFAKYDIKVTDSEKNLTGEPKPYDSFDKFEFLSRGFSDCDAYPDITF FT APVKTIALFDCPLWISKGQDEEEQTIQAIQAGLLLAFDHGPEFFGKYKQLLLEGTSVPT FT YNYFTWSELYSLFHGDVYSSGEQSVQTNNEHGIVLKKIPMVLSYIYADSMCIGSDAEIG FT EEKGALEAQAMFQKKQLRAINISKQAEHYLTAAEDIYDSLDKVKNLEKWRCGCKYDCMR FT EVERRMLEKVGKSMNALLEENAKEPLIEMLE" XX SQ Sequence 9650 BP; 2691 A; 1635 C; 2500 G; 2824 T; 0 other; tcatatgata aaccctgagc tttattgtgt gaccccctga gatttcgatt gcgaaaactt 60 gctatttttt gaattgcgac gtgtagaacc acttacaaaa ctttttgaaa ggattgttta 120 gctaggattc acgcgttgta cgagcttgca tacaagatgc aagattcctc ttgtgaggac 180 cctgggagtt cccctcccaa ccaaagtgtg gcacttccac gagagagtat actctctggg 240 gtgctacgga aaaataatgt agcagaatgt gatgtaccta agagtaaatc cattctcaaa 300 aataaaacga ctatgcttat cacaatggac cctgataccc ctttttcgaa gtatgttgag 360 aatgcacaaa ggttggtgaa ttcgatggta cagtatggat atgattatac tgtggaatcc 420 catgttagat ttattgcgac aaggacaact gtgacgttga agaatggtat ttttaagtat 480 gtgattgttt gtgatggatt gcgtaatgtt aaggaagtga atcaatttgt taatgttgct 540 attttggttg caatgaagaa gtatttattg tatgatgtaa agcgctatac gcagccgcaa 600 ggacccccag agactactaa taccacgaac cccgaagata ttgttaatca aaccgaaata 660 tcacaacaga gcgaaaacac agagataaca caggctgttg atacggcgtc ggcacctttt 720 ttgttaacta cgcatgtgtt gcagcatcaa tcgactacgg aacctaagat ttctttgaat 780 gagcttacag agaggtatat tgttattgct aatggagttt tgacatcggg ggatacgcga 840 ggacaagtga agttctcatt ggatctccca gctgctatat atggtaattt ggactcttcg 900 acgtctactg cgcttcgacc gtttacactt atgaaaactg acttggaaat tactcttaaa 960 attaattcaa atcaagcgca ggctggtcgt tatgtattgg cttcgtatcc gtgtaggaga 1020 caggcttttg gtgtggcaga tagtgtattt cagcagatac agagagagca tgttgaagtg 1080 gatgtttcta catcggccga tgctatttta cagattaagt atgaaaattt acggaatttt 1140 atgccgattt tgactaacga agtgggtgag actactggtg agtcattcac cacgttgacg 1200 cttacgtgtt tgagtcccgt gaatgttgtg gcgggggcgg tggacgtggt tccctaccaa 1260 gtgatagccc gatttgttaa cccgtttcta acagggatga gatacccgtt acccgttcag 1320 ggacaaggac ctgagttccc gattagtacc acaaggacta gggagaaagt tattgagacg 1380 gttagagatg tgaacaatgt gcttggggcg atacccgtat tcggggcgct atataaaacg 1440 gttatgcttg ctggtgcgtc agctgtcact tccgtgacta ggtttgttgc ccctgaacca 1500 tataccaagg ttttggagga tacattggtt tatgttggaa tgagaaataa ggacaaacct 1560 gtggataccc gcccatattc ggtgttgcag cccgtgtcgc agaaggcatt gtgtcatggg 1620 ttgggaccta ttggagcgac gaaaatgaga cttgaaatgt ctgttaatac tccgcatctt 1680 ccagacatgg aaactgtcca gacttcggaa tcttattcgg agttggcaca gattggtgga 1740 gttcaggaaa tttttacggt ttctacgacg actcccaatg gacgattact tattgatttg 1800 cccgtggcac cgttcgatgc ccgttacctg cccaatactg ttatttcggg tactggtgag 1860 ggagcttcgc gcgtgttgcc gcctgtgaca tatatatcgc agctgttcca gggatatact 1920 ggggagttgg agtatgaatt tatacctgtt aaaacggcgg cccacaactt ttctatactt 1980 gttgctttcg taccttttga tggcgagcct ggaaatacta cgtttgcaca ggcgttatcg 2040 tgtcattata agattataga ttttagaaca aattcagctg gtgtttttac ggtgccattt 2100 gtgtctaatt caatgtttag atcgtacact ggtactgagt cgtcttttat gtttgcgaga 2160 aatttgaata ccactacata tacatctccg actatagggg gtggtttgac agtggggccg 2220 tttgctgctt ggaaagatcc cggtaaggtt agtgttttta tgttgaatcc tcttaatccg 2280 acacctattg ttgcccctga gatagagata attgtcaaac tgcgtggtgc caagaatatt 2340 caatttacga taccgtcgca gccgcgattt agaaccgctt acactacaga ttcttatgta 2400 tttgctccaa ttatatctgg agtaacgaat gccaaccatt ggggtacagt gccccagggg 2460 cctgttcaaa caatgaatga tgatgaagta cctggagaac ctacagtgcc attgattggc 2520 ccgcagatga cgcatatgga gatgcacgat gatatattga atgtaaatag gcgattgatg 2580 cattatgcaa gattaactac tgacggattg tattatgttg atggttctgg tgcgactgtg 2640 tatgcaccta tgtctggatc gagtgcgtgt atacctattg tgttgagtga tcccgttttt 2700 caaaattttg gtaataatgg acagggctcg gttaattcgc aggaaatgac tccacgaaat 2760 attcgtgatg ctacggcttc actcttccga ttcggaaggg ggtcggttat tctttcgatt 2820 ttaaatcatt cgcagaacaa tttggtcatt tcatttcttc caccgttcca gcggccaatg 2880 tattttagtg ccgagaatgg aacaacgact tccgtttttt cattgggtgt agctagaact 2940 tcaattggtt tatcggcccc tgactcgcag gggtatgcat ccgttcgaaa tgtaccatcg 3000 gtgaatcctg ttacggatat tgagatacct ttctacagtt cggctgtgta tatggacttg 3060 caggcgcgta atggattggg agcagccctt gcaattatgg gcaattctca gagtatggct 3120 agaggacccc tttatgatgt tgtgacgcga acgttgggaa cgcttaagat acagacggaa 3180 ttatatcctt tccctgcaac tgcggagaat ctcgcaaggt tgcagtctac tgttactatt 3240 cgtatgggat tatcggacga ttttaagttc caccatttta tgggcacccc ccctgtaatt 3300 gcgaattacc cgttggttcc ctcaattggt aatgtcgcgc ggactctgac gagggcggag 3360 attgaggatg aattgattcg tgcaggaatt gaatcaaatc ctggacctgt tgttaaggat 3420 gttggtactg agccgcaggg catgtgggat tttctgaatg atctggttag tgcacctact 3480 gaactaaaga gggtgcgcga acaaggggat tattttaagg aggtcatagg atcgctaaag 3540 gaaaaaatcg tgaggtcgtt taatatatct gtgacgcagg cggccgcttt ggcatcaaca 3600 atgctggcgg cttacatgaa tccctctccg tacacggtcg tctcggctgt gaccaattta 3660 ttggttgcgc ttaatatagt tgatgatact tttcttatga aggttatgtt gggatgtaat 3720 gaaccccaaa atgtgaaggg gcaaggcccg cttgatgacg acaagcgtga gagccctaat 3780 tggatcgtgc ctttgttggt gtcgggattt gttgagtatt gttgttcggc catgcaaaaa 3840 caggacattg cattggatcc cagtaatata gatgaaagga ccgtgtttat gaagttgacg 3900 gaggcgttaa ctggagtgaa ttggtttaga gtgagcgccg ttatggtggt tacctcaagg 3960 ttggtgatgg cttttaagtg gctatttgag aaggttcaat cgtggcttag gccgagtacg 4020 agttatcttt tgttgaagca taatcccaaa tttattgaaa attttatgaa tgactacacg 4080 tttattatga atgaattgaa taaaaattca attataggaa tacgacaatg tagggatagg 4140 ttttggacga cgcttttgtc agcatattat ttgaagggaa taatggcgaa agagagaata 4200 cgtaatccta cgcttttgaa tacggttaat gatattatca agaaagctaa tgaattgaca 4260 tctattttgt cagcgcctcc ggtgcgtttt gagccgtttg tggtgtggat attcgggccg 4320 cgtggtgttg ggaagagtac gttgcttcag cagcagttga ttgatatatt ggagcagcat 4380 aagggcccag gtaagtttga gcacccgaat cccgtatata ctaggaaccc tacctcgcag 4440 tggtggaatg gttataatgg gcagccaatt gttttgtatg atgatattgg agctgtgtct 4500 tctgcggaga tagatccaat agtggctggt gaactgatgg ctattaaatc atgtgccatc 4560 atgccattgg agaagccccg tattgaggaa aaggagtcgt tgatgacatc ggtaattgtt 4620 ggcatagcat ctaaccatcc atgtcttaag tcctcagtaa taagagacgt tggagcgatg 4680 gatagaagga gggacatatt ggcacggtgt gaatttaccc cggaagtaga aaaatatata 4740 aagtctaaga agttgttgaa tgtggcatct gctttaccag aggaaatgac gaggaataac 4800 aaacatttgc gatatggagt gtttaaggat ccgacaaagg ttagaccgaa tacgcaggat 4860 gtgcgagtgg aaactagtac tgaaccggat atgtggctta cgtatgatga gtttatggag 4920 tattctatcg atgtatttac gaggtattac acaaaggagc ttgaaaaaat gacgaaacgg 4980 tacaaagata tgttgcgttt atgcccgaca tatgcgaaag gacttacgga cgaggcatcg 5040 gtgagaatgg ctattatgca gatgatcctt aaagtggagg aatctaagag tacaaccact 5100 atggatactc tgagatattt gatacaaaag ttggaacaaa caacgcctga atattacaag 5160 acattacata aaactacgaa ggagcagctt gagacgatta ataaagtgaa cacacaacct 5220 gaagggaaat ttattataga taaaaataaa tttgatcctg gacattgggc tttatcacag 5280 gttggtggta gtagactagt ggattatgcg aagtatatat atgacacgct cataccgtgg 5340 catgcaccta tatatggtaa ggagactgtt gaatttaagg atgatacgaa gtgtgttttc 5400 tgtaaggaaa aaattgatat ggtaacgtat gtgtgtaata cagcgaaatt caatgaacat 5460 cttgcgtgta cctgtagggc tgctgctgtg gttaatgata caaatgttgt atgtgtgtat 5520 tgcgataccc cgatggttcc cgtatttaat agacagccac agagtatcta taattggatg 5580 gcggcgcttt tgtcggcggc gaaggacgtg ttatatgatc ctatcaatag cttgccggaa 5640 acatggaata aggaaaaatt tcgaaccaat atgaggatgc ttgcgatatc tgctgttacg 5700 gcgcttgtca tgtatacatc tataaatttt gctgacatcg tgtttaagaa atctacttac 5760 aatgcttttt ataagtatgt tggggaatta ccccataagg ttttaacggt tggagaacaa 5820 gtgtacctta tgacgaagtc tggcgtgaag tttttgttgt gtaggaacca agacactgag 5880 ttttttatcc cggctaagga tgatgttgaa aacgcacaag gcgagtttga tgtgctgcca 5940 atagagccgg gggaaattat ggatattgaa ttgggcggag gatcgggttt taaagtggtt 6000 ggtcattcta agaaggcatc caggaaggcg caaaagataa atagagaaga atttagtaaa 6060 atttcggaca ctgcctcgac atcctcagat gaaagcgacg cgtctgcgca caaacatgag 6120 aaacacggtg tggaattctt ttcttggctt agagttgggg agagggagaa gtgtcagcat 6180 gatggtgcga ttattgaaaa gatattgcgc aagaggatgt ctgaattgtc gtgcacattg 6240 gatggaaaat tggtgttgta tgcggttgag gaggacgaga ctgagatagt tttggtcgtg 6300 gagaaatgct gtagcgcatg tttattattg gacgatcgca tagtgcttaa gataagtgat 6360 ttttttaacc agaactcacc gatttggaag caacacatag atgaaggatt gctggaatat 6420 gtgccagagt tgtatgttaa gtttcttatg gagtgtagga atggtgccaa tgtggaaagg 6480 acagtacaca atgagaaata ttcgaaatgg cagaatcaga ttctgtccca gataacaact 6540 aagtttatgg aggcagtgca tgtggtttgg gtttttttga cggagaatta taaaatgttt 6600 ttatccggat gtgccattat cttctgtgcg tataagggat ataagtggta taaaaatgat 6660 gaagggatta ttgagccagt ggatcctcag ggttcttatg tttcggcgtc acagaggact 6720 attaggtctg gtattactag aacaatcaat aattcatatc ttaagggtac gcaggcacat 6780 ggaccgtatt tgaaggaacc gaaccaggcg gtgttggcta gggctgctag aatacggaag 6840 aattatataa cgatgcagct taattccata cccatttggg gtattggttt gtacggacat 6900 acggttttga tgacgaggca taattggcat tggcttaagt ttgcggcaag aactatgaac 6960 ttggatgcgc ttacgatcat gtcacgtgga agtgacaatg ttgtcgtgaa gttcagtgag 7020 gtattggagg ttttggacct gcccgaggtt gaacatgtgt tgattgaatt gcctaagaaa 7080 gggctgcaat gtttttcgaa catacgcacg tattttacaa aaggtttaga tgagaagggt 7140 gaagcgacga acccacagtt ggacgagttg gcatattata ttgatgtgtt ggacggtttg 7200 actttaaagt ctacggcaat atctgctata gggaagggag aaccagtgca gacaacattt 7260 actattaata gtaagactga ggattatttg aattcaatac catcgcagta tgattggata 7320 attacaccga cccaggcgaa gggtatgtgt ctaactgcat ttctagacaa gcagggtaac 7380 atacttgggt tccatgtggc agggaatgcg cgacttcggc agggatatgt tgcacctatt 7440 tttagggaac ttattcccga tgccggcatt gctagtgtgg tgacggagcc cgagggacca 7500 tctacggaga acctcacgta tatgtacagt gtgatagatg caccatacca tacgttccag 7560 tcgaagattg taccatcggt attgcaaagt gaggcttatg atccagagaa ggaaccgtgt 7620 atacagagta gaacggatcc tcgatacacg cacggagcgg atccattaac ggatggagtg 7680 gctactattg ggcaaccaac gaagccattg aatgatgaaa tacttatgtt ggcgtatgag 7740 tctgtgcgtg atgagcttct tggggttctg ccaccaccgt atgtgcaacc accagtgtct 7800 atcagggagg cgattaccgc tgagagggcc ccaatttcgt cgtcaatgaa cttggccacg 7860 agtgcgggtt atcctcttgc ggggcgcgga tcgcgtgaaa aaaagaaaag tgattacatt 7920 cttggcggac agttgaaggc gagtgtacac aataagatta ataaggcata tgtccagaga 7980 actaatggga taaggccacc gtgtgtttat tgggcgcatc ttaaggatga attgagacca 8040 agtgagaaat tacgaagatt tggagggact cgtgttttta gtgtaccacc attagagttg 8100 gtgttgaatt ctaggcgttt cttgcttcca tttatggatg catttcaaag ctttccaatc 8160 gaggctcacc atgccatagg acttaaccca aattccggag attggagaag gttgcgagat 8220 acattgttgg aaaaggggcc ctgtttgttg caaatggatt ataaaaatta ttctgatgca 8280 atacctaagg aatgtgttgc gaaggcgttc cacattatag tagattatta tagaaagtgg 8340 cattgctcta cggttgagat agagaatgct ttgaagacat tatttttgga tacggctgat 8400 gctgaattgc tcgtgtatgg cgacgtgttt aaagttaaca atggagtact ggctgggcat 8460 ccaatgactt ccgttgtgaa ttccgtagtg aatcttattt taatgaatta tatgtggatc 8520 aagataactc gtcgtagagc gagcgagttt ttcaagttaa cgtatattat tgtcatgggt 8580 gacgatgttg taatatcgtt gccaaaacag ctcactgaag agtttgattg taggaaaatt 8640 tgcgcagagt tcgctaagta tgacattaaa gttacagaca gtgagaaaaa tttaacaggc 8700 gaaccaaagc catatgattc ttttgacaaa tttgaattct tatcgagggg ttttagcgac 8760 tgcgatgctt accccgacat aacgtttgca cctgtcaaga cgattgcatt atttgattgt 8820 cccctctgga taagtaaagg ccaggatgag gaagagcaaa caatacaggc tattcaggcc 8880 gggctattgt tggcgtttga tcatggaccc gagttctttg gaaagtataa gcagctgttg 8940 ctggaaggca cgtcagttcc gacatataat tattttacgt ggagtgagct gtattccttg 9000 tttcatggtg atgtttatag ttctggcgag cagtctgtgc aaaccaataa tgagcatggg 9060 attgtcttga agaaaatacc aatggtgttg tcctacattt atgcagattc gatgtgtatt 9120 ggcagtgatg cagagattgg tgaagagaag ggagcactcg aagcgcaagc aatgtttcaa 9180 aagaagcagc tgagggcaat taatatctct aaacaggcgg agcactacct gacggccgct 9240 gaagatatct atgatagttt ggataaggtg aagaacttag agaagtggag atgtggttgc 9300 aaatatgatt gtatgagaga ggttgaaagg agaatgctcg aaaaagtggg aaagtcgatg 9360 aatgccctgc ttgaggagaa cgccaaggaa cctttaatag agatgttgga atgaagcagt 9420 ttattttaaa tatttagttt gatatttttg gtttgtataa ttgtattatt aatattatat 9480 tgtttatcag gtagttatag ctgggcacac ttgcggtttc cgaacgcagt cggagatacg 9540 tagtcagcta gtagcgcatg tttatttaga attaggacac cggaagtgga acgcctaaga 9600 gagcgaggcc cgcggtgtag gttttgatca tttattcttt ataattgtgt 9650 // ID AB000920; SV 1; circular; genomic DNA; STD; VRL; 1007 BP. XX AC AB000920; XX DT 28-OCT-1998 (Rel. 57, Created) DT 18-FEB-2014 (Rel. 119, Last updated, Version 7) XX DE Milk vetch dwarf C1 alphasatellite gene for viral replication-associated DE protein, complete cds. XX KW . XX OS Milk vetch dwarf C1 alphasatellite OC Viruses; Alphasatellitidae; Nanoalphasatellitinae; Mivedwarsatellite. XX RN [1] RP 1-1007 RA Sano Y.; RT ; RL Submitted (08-FEB-1997) to the INSDC. RL Contact:Yoshitaka Sano Niigata University, Faculty of Agriculture; Ikarashi RL 2-8050, Niigata, Niigata 950-2181, Japan XX RN [2] RA Sano Y., Wada M., Hashimoto Y., Matsumoto T., Kojima M.; RT "Sequences of ten circular ssDNA components associated with the milk vetch RT dwarf virus genome"; RL J. Gen. Virol. 79:3111-3118(1998). XX DR MD5; 70727ea6e0abed2543fdc87cae1c3939. DR EuropePMC; PMC2922188; 20678232. XX FH Key Location/Qualifiers FH FT source 1..1007 FT /organism="Milk vetch dwarf C1 alphasatellite" FT /segment="1" FT /lab_host="Pisum sativum" FT /mol_type="genomic DNA" FT /db_xref="taxon:1455651" FT stem_loop 1..33 FT regulatory 51..57 FT /regulatory_class="TATA_box" FT CDS 91..936 FT /product="viral replication-associated protein" FT /function="helicase" FT /note="putative" FT /db_xref="GOA:Q9Z0D5" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR003365" FT /db_xref="UniProtKB/Swiss-Prot:Q9Z0D5" FT /protein_id="BAA33980.1" FT /translation="MPTLQGTFWCFTLNFSGDAPSLSFNERVQYACWQHERVSHDHLQG FT YIQMKKRSTLKMMKELLPGAHLEVSKGTPEEASDYAMKEETRVAGPWTYGELLKKGSNK FT RKLLDRYKENPEDMELEDPAKARRCRAKIDKEKFIAEFKVEDDEQEWKKILEKEIEKIA FT SPRSILWVYGPQGGEGKTSKAKELITRGWFYTRGGKKDDVAYSYVEDPTRHVVFDIPRD FT MQEYCNYSLIEMLKDRIIISNKYEPITNCQVYNIHVIVMANFLPDVTKISEDRIKIIYC FT " FT regulatory 915..920 FT /regulatory_class="polyA_signal_sequence" XX SQ Sequence 1007 BP; 348 A; 177 C; 230 G; 252 T; 0 other; agcacaggcg gcctagtatt acccgcctgt gctccccatc ctttgctccc tataaaaggg 60 agcatttctc tcatttggtc attttaccaa atgccaactc ttcaaggcac tttctggtgt 120 ttcaccctca acttctctgg agacgctcca tctctctcgt tcaacgagag agttcaatac 180 gcatgctggc aacatgagag agtgtcccac gaccatctcc agggttatat tcaaatgaag 240 aagaggtcta ctctgaagat gatgaaggaa ttacttccag gtgcacacct ggaagtatcc 300 aaaggaacac cagaagaagc gtcggattac gccatgaaag aagaaacaag agttgcaggt 360 ccttggactt acggtgagtt gttgaagaaa ggaagtaaca aaagaaagct actagataga 420 tataaagaaa acccagaaga tatggaatta gaagatcctg ctaaggcgag acgttgtcga 480 gctaagatag acaaagaaaa atttattgca gagttcaagg ttgaagacga tgaacaggaa 540 tggaaaaaaa tattagaaaa agaaattgaa aagattgctt cgcctcgaag tattctttgg 600 gtgtatggcc cacaaggtgg agaaggaaag acgagtaaag caaaagaact aataacgcgt 660 ggttggtttt acacgcgcgg aggaaagaaa gatgacgtgg cttatagtta tgtggaggac 720 cccacaaggc atgtggtatt tgatatacca cgtgatatgc aagaatattg taattacagc 780 ttaatagaga tgcttaagga tagaattatt attagtaaca aatatgagcc aattacaaat 840 tgccaagtgt ataatattca tgtaattgta atggctaact ttttacctga tgtaacaaaa 900 atatctgaag atagaataaa aataatttat tgttgaaatt cgcgtagcgg tatgttttag 960 gcccattagg cccaataagg cccattaaga gggagcagac cgtacat 1007 // ID AB000921; SV 1; circular; genomic DNA; STD; VRL; 1009 BP. XX AC AB000921; XX DT 28-OCT-1998 (Rel. 57, Created) DT 18-FEB-2014 (Rel. 119, Last updated, Version 7) XX DE Milk vetch dwarf C2 alphasatellite gene for viral replication-associated DE protein, complete cds. XX KW . XX OS Milk vetch dwarf C2 alphasatellite OC Viruses; Alphasatellitidae; Nanoalphasatellitinae; OC unclassified Nanoalphasatellitinae. XX RN [1] RP 1-1009 RA Sano Y.; RT ; RL Submitted (08-FEB-1997) to the INSDC. RL Contact:Yoshitaka Sano Niigata University, Faculty of Agriculture; Ikarashi RL 2-8050, Niigata, Niigata 950-2181, Japan XX RN [2] RA Sano Y., Wada M., Hashimoto Y., Matsumoto T., Kojima M.; RT "Sequences of ten circular ssDNA components associated with the milk vetch RT dwarf virus genome"; RL J. Gen. Virol. 79:3111-3118(1998). XX DR MD5; b2565d75ef58e287a846ac8961e3ad6c. XX FH Key Location/Qualifiers FH FT source 1..1009 FT /organism="Milk vetch dwarf C2 alphasatellite" FT /segment="2" FT /lab_host="Pisum sativum" FT /mol_type="genomic DNA" FT /db_xref="taxon:1455653" FT stem_loop 1..32 FT CDS 69..917 FT /product="viral replication-associated protein" FT /function="helicase" FT /db_xref="GOA:Q9Z0D4" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR003365" FT /db_xref="UniProtKB/Swiss-Prot:Q9Z0D4" FT /protein_id="BAA33981.1" FT /translation="MASKRWCFTLNYKTALERETFISLFSRDELNYFVCGDEIAPTTGQ FT KHLQGYVSMKKLIRLGGLKKKFGSIAHWEIAKGDDFQNRDYCTKETLIAEIGAPVKKGS FT NRRKIMEIYEEDPEEMKLRDPDTALRCKAKKLREEYCSEVSVFSLRPWQIELHRALMEV FT PDDRTIIWAYGPDGGEGKSTFAKELIKYGWFYTAGGKTQDILYMYAQDPERNIAFDVPR FT CSSEMMNYQAMEMMKNRVFASTKYRPVDLCIRKKVHLIVFANVAPDPTKLSEDRIVIIN FT C" FT regulatory 917..922 FT /regulatory_class="polyA_signal_sequence" FT regulatory 930..936 FT /regulatory_class="TATA_box" XX SQ Sequence 1009 BP; 318 A; 174 C; 235 G; 282 T; 0 other; acgaggcggg ttctagtatt accccgcctc gttacactac ctcgttacat tttctctctc 60 tagagagaat ggcatctaag cgttggtgct ttacgctgaa ctataagaca gcgttagaga 120 gagaaacatt catttctctc ttctctcgcg acgaattgaa ctatttcgtt tgtggagacg 180 aaatcgctcc cactactggg cagaaacatc tccaaggata tgtttcgatg aagaaattaa 240 ttcgtctggg tggattgaag aagaaatttg gatctattgc tcattgggag atcgctaagg 300 gagacgattt tcagaatcgc gattactgta cgaaagaaac cctaattgca gaaattgggg 360 ctccggtgaa gaaaggctca aatcgaagga agattatgga gatatacgaa gaagatccag 420 aagaaatgaa attgcgagat ccggatactg cccttcgctg taaggcgaag aaattaagag 480 aagagtattg ttctgaagtt tcggtgtttt ctcttcgacc atggcaaatt gagttacaca 540 gagcgttaat ggaggttcct gacgacagaa caattatttg ggcgtatggc ccagatggag 600 gcgaaggtaa atctaccttc gcgaaagaat taatcaaata tggttggttt tatactgcag 660 gaggaaagac ccaggacata ctgtatatgt atgcgcaaga tcctgaaaga aatattgcgt 720 tcgatgtacc caggtgttct tcggagatga tgaactatca agcaatggaa atgatgaaga 780 atagagtatt tgcaagtaca aaatataggc ctgtagatct ttgtataaga aagaaggttc 840 atttaattgt atttgccaac gtggcacctg accccacaaa attaagtgag gacagaattg 900 taattatcaa ttgttgatta aatgaataat atattatttt atggaactcc gtagcgccag 960 ctgtcctttt tttggagagt gtccaaaaaa acctcgttac actatatat 1009 // ID AB000922; SV 1; circular; genomic DNA; STD; VRL; 1000 BP. XX AC AB000922; XX DT 28-OCT-1998 (Rel. 57, Created) DT 18-FEB-2014 (Rel. 119, Last updated, Version 7) XX DE Milk vetch dwarf C3 alphasatellite gene for virus replication-associated DE protein, complete cds. XX KW . XX OS Milk vetch dwarf C3 alphasatellite OC Viruses; Alphasatellitidae; Nanoalphasatellitinae; Clostunsatellite. XX RN [1] RP 1-1000 RA Sano Y.; RT ; RL Submitted (08-FEB-1997) to the INSDC. RL Contact:Yoshitaka Sano Niigata University, Faculty of Agriculture; Ikarashi RL 2-8050, Niigata, Niigata 950-2181, Japan XX RN [2] RA Sano Y., Wada M., Hashimoto Y., Matsumoto T., Kojima M.; RT "Sequences of ten circular ssDNA components associated with the milk vetch RT dwarf virus genome"; RL J. Gen. Virol. 79:3111-3118(1998). XX DR MD5; ae94714fd653a0d78a09b16c1f214d58. XX FH Key Location/Qualifiers FH FT source 1..1000 FT /organism="Milk vetch dwarf C3 alphasatellite" FT /segment="3" FT /lab_host="Pisum sativum" FT /mol_type="genomic DNA" FT /db_xref="taxon:1455654" FT stem_loop 1..29 FT CDS 58..912 FT /product="virus replication-associated protein" FT /function="helicase" FT /note="putative" FT /db_xref="GOA:Q9Z0D3" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR003365" FT /db_xref="UniProtKB/Swiss-Prot:Q9Z0D3" FT /protein_id="BAA33982.1" FT /translation="MPTVQSTCWVFTLNFKGEIPILPFNERVQYACWQHERVGHDHLQG FT FIQMKAQQSLGQMKAIIPGAHFEKMRALNSDQAKAYAMKEDTRIEGPWEYGKYIKKGSH FT KRKIMERFEDDPEEMKIEDPSLYRRCLSRKMTEEQRSTAEWNYDMKPWQDQVIQEIEET FT PDYRKIIWVYGPKGGEGKSTFARYLSLKQGWGYLPGGPTHDMLHIISGEPKNNWVFDIP FT RVASEYVNYGVLEQVKNRVMVNTKYEPIVIRDDNHPVHVIVFANCMPDFTKISEDRMKI FT VHC" FT regulatory 990..996 FT /regulatory_class="TATA_box" FT regulatory 990..995 FT /regulatory_class="polyA_signal_sequence" XX SQ Sequence 1000 BP; 333 A; 185 C; 238 G; 244 T; 0 other; gagaggcggc atagtattac ccgcctctca tccctcacct ttcatcccgg tcccaccatg 60 ccaactgtgc aatccacttg ttgggtgttc acacttaact ttaaagggga aattcctatt 120 ttgcccttta atgaacgcgt tcagtacgcc tgttggcaac acgaaagagt gggccatgac 180 cacttacagg gctttattca gatgaaggcc caacaatctt tgggccaaat gaaggccatt 240 attcctggag cccattttga gaaaatgagg gcattaaatt cagaccaggc taaggcttac 300 gctatgaagg aagacacacg aatagaagga ccatgggagt atggaaaata cattaagaag 360 ggatcgcata agagaaaaat tatggagcga tttgaagacg acccagaaga aatgaagatt 420 gaagatccct cactatatcg tcgttgtcta tcaaggaaga tgacagaaga acaacgatca 480 actgcagagt ggaattacga tatgaagcca tggcaagacc aagtcataca agagatagaa 540 gagacacctg attaccgaaa gattatatgg gtttacggcc ccaaaggagg tgaaggaaag 600 agtacgtttg ccaggtacct ttcactcaaa caaggttggg gttatttacc tggtggtccg 660 acgcatgaca tgctgcatat catcagtgga gaaccgaaga acaactgggt ctttgacatc 720 ccaagagtag cgtctgagta tgtgaattat ggtgtattag aacaggttaa aaatagagtt 780 atggttaata ctaagtatga gccaatagta attagggatg ataatcatcc tgttcatgta 840 attgtgtttg ctaattgtat gccagacttc acaaaaataa gtgaagatcg aatgaaaata 900 gtccattgtt aagaaatatg ttgtttttaa aactacgcga agcgaagtcc cacatcgaat 960 aggttggaga actgagcgag ggatgaaagc aataaatagg 1000 // ID AB000923; SV 1; circular; genomic DNA; STD; VRL; 990 BP. XX AC AB000923; XX DT 28-OCT-1998 (Rel. 57, Created) DT 21-JUN-2008 (Rel. 96, Last updated, Version 6) XX DE Milk vetch dwarf virus genome segment 4 encoding viral non-structural DE protein, complete sequence. XX KW . XX OS Milk vetch dwarf virus OC Viruses; Nanoviridae; Nanovirus. XX RN [1] RP 1-990 RA Sano Y.; RT ; RL Submitted (08-FEB-1997) to the INSDC. RL Contact:Yoshitaka Sano Niigata University, Faculty of Agriculture; Ikarashi RL 2-8050, Niigata, Niigata 950-2181, Japan XX RN [2] RA Sano Y., Wada M., Hashimoto Y., Matsumoto T., Kojima M.; RT "Sequences of ten circular ssDNA components associated with the milk vetch RT dwarf virus genome"; RL J. Gen. Virol. 79:3111-3118(1998). XX DR MD5; 97982704bae9e3da100a5d2b6ca86b4d. DR EuropePMC; PMC111794; 10708410. DR EuropePMC; PMC3128733; 20069400. XX FH Key Location/Qualifiers FH FT source 1..990 FT /organism="Milk vetch dwarf virus" FT /segment="4" FT /lab_host="Pisum sativum" FT /mol_type="genomic DNA" FT /db_xref="taxon:67585" FT stem_loop 6..34 FT regulatory 279..285 FT /regulatory_class="TATA_box" FT CDS 319..828 FT /product="viral non-structural protein" FT /function="unknown" FT /db_xref="GOA:Q9Z0D2" FT /db_xref="UniProtKB/Swiss-Prot:Q9Z0D2" FT /protein_id="BAA33983.1" FT /translation="MGLKYFAHLPLELREKIVRDHLQEERKKEFLEKAIEDSCRRHEAL FT LIEDPSPAELNSLSKFLTALSDYVGNQFNTRCLIRWKKDVPSKVKFGFMDEQHHKLYGS FT MDMDDLSCGELFIPDEEDDLTYEDGVIVRCSQLDQLFKSLGIEIVYIVVSKHCIWAPLS FT KEIVIK" FT regulatory 820..825 FT /regulatory_class="polyA_signal_sequence" XX SQ Sequence 990 BP; 285 A; 161 C; 226 G; 318 T; 0 other; acgtaggggc ggggcttagt attacccccg ccccgggttc agagtcacgt acggagtgac 60 ttacagccgt tagatgtgta tacacgtgga cgatcaggat ctgtgattcg tgaagcgaat 120 ctgacggaag atcgtccgaa gcttcgtggt agggccccta tgttgcttta tctttacttt 180 aataaagtaa agtaagatgc tgtcccttgc tttattcgtt tgctagttgt ttacagctgt 240 ctttgcttcg cctcgaagca aaggacattc tcatcgtcta taaaagctgt gtttttcttc 300 gttgtaacaa caacgaaaat gggtctgaaa tatttcgctc atcttccgtt agaattgaga 360 gagaagatcg ttcgtgatca tttgcaagag gagaggaaga aagagtttct ggagaaggct 420 attgaagata gctgtagaag acatgaggct ttgttgatag aagacccttc acctgcagaa 480 ctgaattctc tgagtaagtt cttaactgct ttatctgatt acgttggtaa tcagtttaat 540 accagatgtt taattagatg gaagaaggat gttccttcca aagttaagtt tggatttatg 600 gatgaacaac atcataagct atatggttct atggacatgg atgatctttc atgtggagag 660 ttgttcattc ctgatgaaga agatgatctt acctatgaag atggtgtcat agttagatgt 720 agtcagttag accaattgtt caaatcttta ggaattgaga tagtttacat tgttgtaagt 780 aagcattgta tttgggctcc tttgagcaag gagattgtaa ttaaatgatt taatgaaata 840 caattaatac attacaataa tatttgagaa atatattatt tttaattact ctgcgaagct 900 atatgtcgtg gcccaatagg cccaaatgct cttaagccca atgaaattaa cactgaagtg 960 agtcagctga cgtcagctga ctccttgatg 990 // ID AB000924; SV 1; circular; genomic DNA; STD; VRL; 989 BP. XX AC AB000924; XX DT 28-OCT-1998 (Rel. 57, Created) DT 21-JUN-2008 (Rel. 96, Last updated, Version 6) XX DE Milk vetch dwarf virus genome segment 5 encoding viral non-structural DE protein, complete sequence. XX KW . XX OS Milk vetch dwarf virus OC Viruses; Nanoviridae; Nanovirus. XX RN [1] RP 1-989 RA Sano Y.; RT ; RL Submitted (08-FEB-1997) to the INSDC. RL Contact:Yoshitaka Sano Niigata University, Faculty of Agriculture; Ikarashi RL 2-8050, Niigata, Niigata 950-2181, Japan XX RN [2] RA Sano Y., Wada M., Hashimoto Y., Matsumoto T., Kojima M.; RT "Sequences of ten circular ssDNA components associated with the milk vetch RT dwarf virus genome"; RL J. Gen. Virol. 79:3111-3118(1998). XX DR MD5; 1c1e49c4b87b14ea437d161306137af7. XX FH Key Location/Qualifiers FH FT source 1..989 FT /organism="Milk vetch dwarf virus" FT /segment="5" FT /lab_host="Pisum sativum" FT /mol_type="genomic DNA" FT /db_xref="taxon:67585" FT stem_loop 6..34 FT regulatory 279..285 FT /regulatory_class="TATA_box" FT CDS 376..828 FT /product="viral non-structural protein" FT /function="unknown" FT /note="putative" FT /db_xref="UniProtKB/Swiss-Prot:Q9Z0D1" FT /protein_id="BAA33984.1" FT /translation="MSVNDYSLFDEATDELVSSERKLIAVDCHDDDSQVINVKVEDIFC FT DMSDKVVLKLQFRLCYKYRKLLDITLLGCRMKVYTELKTPSERSLKSILQKKMNIISDG FT NYLIGIRMFFININQLINTCKWITRIEDVYPICTLYHVNNTPVIDI" FT regulatory 827..832 FT /regulatory_class="polyA_signal_sequence" XX SQ Sequence 989 BP; 284 A; 167 C; 210 G; 328 T; 0 other; acgtaggggc ggggcttagt attacccccg ccccgggttc agagtcacgt acggagtgac 60 ttacagccgt tggattttaa ataagatgga cgatcaggat ctgtgattcg tgaagcgaat 120 gtgacggaag atcgtccgaa gcttcgtggt agggccccca tgttgcttta tctttacttt 180 aataaagtaa agtaagatgc tgtcccttgc tttattcgtt tgctagttgt ttacagctgt 240 ctttgcttcg cctcgaagca aaggacattc tcatcgtcta taaaagctgt gtttctgaag 300 aagatgcatt gttcatcttc ttctttctca caaacaacat tgtttgtttc atcaaactaa 360 agcttctcag aggtcatgtc tgtgaacgat tattcgttgt ttgatgaggc taccgatgag 420 ttagtatcgt ctgagaggaa attgatagcc gtcgactgcc atgatgacga ttctcaggta 480 attaacgtta aggttgaaga catattctgc gatatgtccg acaaggtcgt tcttaaactt 540 cagtttagat tgtgttacaa gtatcgaaag cttttagata ttactcttct tgggtgtcgt 600 atgaaggttt atacagagtt gaagacacca agtgagcgtt ctttgaagag tattttacag 660 aagaagatga atattatatc tgatgggaat tacttgatag gtattagaat gttttttata 720 aatattaatc agttgattaa tacatgtaaa tggattacca gaattgaaga tgtatatcca 780 atatgtactt tgtatcatgt gaataacact cctgtaatag acatttaata atgaatactt 840 gtttcagaaa caaatacctg tatggataaa tatattattt ttaattactc tgcgaagcta 900 tatgtcttgg cccaataggc ccaaatgctc ttaagcccaa tgaaattaac actgaagtga 960 gtcagctgac gtcagctgac tccttgatg 989 // ID AB000925; SV 1; circular; genomic DNA; STD; VRL; 977 BP. XX AC AB000925; XX DT 28-OCT-1998 (Rel. 57, Created) DT 21-JUN-2008 (Rel. 96, Last updated, Version 6) XX DE Milk vetch dwarf virus genome segment 6 encoding viral non-structural DE protein, complete sequence. XX KW . XX OS Milk vetch dwarf virus OC Viruses; Nanoviridae; Nanovirus. XX RN [1] RP 1-977 RA Sano Y.; RT ; RL Submitted (08-FEB-1997) to the INSDC. RL Contact:Yoshitaka Sano Niigata University, Faculty of Agriculture; Ikarashi RL 2-8050, Niigata, Niigata 950-2181, Japan XX RN [2] RA Sano Y., Wada M., Hashimoto Y., Matsumoto T., Kojima M.; RT "Sequences of ten circular ssDNA components associated with the milk vetch RT dwarf virus genome"; RL J. Gen. Virol. 79:3111-3118(1998). XX DR MD5; c86e12866e54334c55d830150347c75e. XX FH Key Location/Qualifiers FH FT source 1..977 FT /organism="Milk vetch dwarf virus" FT /segment="6" FT /lab_host="Pisum sativum" FT /mol_type="genomic DNA" FT /db_xref="taxon:67585" FT stem_loop 1..33 FT regulatory 304..310 FT /regulatory_class="TATA_box" FT CDS 363..824 FT /product="viral non-structural protein" FT /function="unknown" FT /note="putative" FT /db_xref="GOA:Q9Z0D0" FT /db_xref="InterPro:IPR008706" FT /db_xref="UniProtKB/Swiss-Prot:Q9Z0D0" FT /protein_id="BAA33985.1" FT /translation="MADWFASPLKTCTHVCDFPTLAGDPSQEITCCDSMKNKLNDSRKV FT LLVSCSVSFNGSFYGGNRNVRGQLQISMLEDDGVCRPIGYVPIGGYLYHNDYGYYEGEK FT TFNLDIESQYLKKDEDYNRKFIVSVLNENGLDSLCDLKVFIVHALRIKV" FT regulatory 823..828 FT /regulatory_class="polyA_signal_sequence" XX SQ Sequence 977 BP; 275 A; 162 C; 213 G; 327 T; 0 other; ctggggcggg gcttagtatt acccccgccc caggatcagc ggagtcattt agactcatta 60 taagccctta gatgtgtaga cacgtgtaca atcaggatct gtgattcgtg aagcgaatct 120 gacggaagat tgtacaacac gctaaactgt atatgtacgc gtgtttaaat gctattggtc 180 catatagtag tggagctcac gcgttttctt ttaacgcggt ttactttatc agtggggacc 240 attagttgct ttgttcacac gaaagcagat tcttttgtgt tgaagaagct tcatatattg 300 ttctataaat acatagcttc ttcttcttct tcgtcgtcat catttttctg caactgcaaa 360 aaatggcaga ttggttcgcg agtcctttga agacatgtac acatgtctgt gattttccta 420 ctttagctgg tgatccatca caagagatta cctgctgtga tagtatgaag aataaattaa 480 atgattccag gaaggtgtta cttgtgagtt gtagtgtaag cttcaatggc agtttctatg 540 gaggcaacag aaatgttcgt ggtcagttgc agatatctat gcttgaagac gatggtgttt 600 gtagaccaat tggttatgtt ccaattggtg gttacttgta tcataacgat tatggttatt 660 acgaaggtga gaagacattc aatctcgaca ttgaatccca gtatttgaag aaagatgaag 720 attacaacag gaagtttatt gtgtctgttc tcaacgagaa tggattagat agtttatgtg 780 atttaaaggt ttttattgtt catgctctta ggatcaaagt gtaataatca tatttaatgt 840 aagattatgc atatgaataa taacactaac aataatacat ttgttttaat tactccgcgt 900 agcggtatgt ttaggcccaa taggcccaaa tgctcttaag cccaaataat tgtgacgtca 960 tttgatcccg tgctgag 977 // ID AB000926; SV 1; circular; genomic DNA; STD; VRL; 981 BP. XX AC AB000926; XX DT 28-OCT-1998 (Rel. 57, Created) DT 21-JUN-2008 (Rel. 96, Last updated, Version 6) XX DE Milk vetch dwarf virus genome segment 7 encoding viral non-structural DE protein, complete sequence. XX KW . XX OS Milk vetch dwarf virus OC Viruses; Nanoviridae; Nanovirus. XX RN [1] RP 1-981 RA Sano Y.; RT ; RL Submitted (08-FEB-1997) to the INSDC. RL Contact:Yoshitaka Sano Niigata University, Faculty of Agriculture; Ikarashi RL 2-8050, Niigata, Niigata 950-2181, Japan XX RN [2] RA Sano Y., Wada M., Hashimoto Y., Matsumoto T., Kojima M.; RT "Sequences of ten circular ssDNA components associated with the milk vetch RT dwarf virus genome"; RL J. Gen. Virol. 79:3111-3118(1998). XX DR MD5; 5140b9341fc7feda4dcf46729241f6cf. XX FH Key Location/Qualifiers FH FT source 1..981 FT /organism="Milk vetch dwarf virus" FT /segment="7" FT /lab_host="Pisum sativum" FT /mol_type="genomic DNA" FT /db_xref="taxon:67585" FT stem_loop 6..34 FT regulatory 280..286 FT /regulatory_class="TATA_box" FT CDS 346..723 FT /product="viral non-structural protein" FT /function="unknown" FT /note="putative" FT /db_xref="UniProtKB/Swiss-Prot:Q9Z0C9" FT /protein_id="BAA33986.1" FT /translation="MEDFKQPKLSYGEIVQMKEEQDAFWSCYHEFLRRNEDVLGEMCRR FT HGRKLPAYPKLPTYAPIRWVLKTKAIYDVRVDECKSCSHEEISRRDYNPIKKEGLKDLY FT DSGNYRYQVYYSSSCNRDKSD" FT regulatory 730..735 FT /regulatory_class="polyA_signal_sequence" XX SQ Sequence 981 BP; 291 A; 170 C; 214 G; 306 T; 0 other; acgtaggggc ggggcttagt attacccccg ccccaggatc agcggagtca tttagactcg 60 ctataagccg ttagatgtgt atacacgtgg acgatcagga tctgtgattc gtgaagcgaa 120 tctgacggaa gatcgtccga agcttcgtgg tagggccccc atgttgcttt atctttactt 180 taataaagta aagtaagatg ctgtcccttg ctttattcgt ttgctagttg tttacagctg 240 tctttgcttc gcctcgaagc aaaggacatt ctcatcgtct ataaaagctg tgttctccgt 300 gtgtaattcg tcggaattat cgagcgtaag tctcgttctt gttctatgga agatttcaag 360 caaccaaagc tctcttatgg agagatagtt caaatgaagg aagaacaaga tgctttctgg 420 agttgttatc atgagtttct ccgtcgcaat gaagatgttc ttggagagat gtgcagacgc 480 catggaagga aattgcctgc atatccaaag ctccctacat atgctccgat acggtgggtt 540 cttaagacta aggcaattta tgatgtcaga gtagatgaat gtaagtcatg ttcgcatgag 600 gaaattagta gaagggatta taatcccatt aagaaagaag gtttaaaaga cctgtatgat 660 tcaggtaatt atagatatca agtgtattat tcttcatcgt gtaatagaga taaatcagat 720 taatagataa ataattacaa ttgtattgtt tctgctattg tttatgtttc attaataatt 780 tatggtttgc aaaaccagag ctattcagag gtagaagaca actacaattg ataacatata 840 cattacaatg atatttgaga aatatattat ttttaataac tctgcgaagc tatatgtctt 900 ggcccaatag gcccaaatgc tcttaagccc aatgaaatta acactgaagt gagtcagctg 960 acgtcagctg actccttgat g 981 // ID AB000927; SV 1; circular; genomic DNA; STD; VRL; 985 BP. XX AC AB000927; XX DT 28-OCT-1998 (Rel. 57, Created) DT 21-JUN-2008 (Rel. 96, Last updated, Version 6) XX DE Milk vetch dwarf virus genome segment 8 encoding viral non-structural DE protein, complete sequence. XX KW . XX OS Milk vetch dwarf virus OC Viruses; Nanoviridae; Nanovirus. XX RN [1] RP 1-985 RA Sano Y.; RT ; RL Submitted (08-FEB-1997) to the INSDC. RL Contact:Yoshitaka Sano Niigata University, Faculty of Agriculture; Ikarashi RL 2-8050, Niigata, Niigata 950-2181, Japan XX RN [2] RA Sano Y., Wada M., Hashimoto Y., Matsumoto T., Kojima M.; RT "Sequences of ten circular ssDNA components associated with the milk vetch RT dwarf virus genome"; RL J. Gen. Virol. 79:3111-3118(1998). XX DR MD5; 8370249f6682339c23c110a8b754de64. XX FH Key Location/Qualifiers FH FT source 1..985 FT /organism="Milk vetch dwarf virus" FT /segment="8" FT /lab_host="Pisum sativum" FT /mol_type="genomic DNA" FT /db_xref="taxon:67585" FT stem_loop 1..33 FT regulatory 276..282 FT /regulatory_class="TATA_box" FT CDS 344..682 FT /product="viral non-structural protein" FT /function="unknown" FT /note="putative" FT /db_xref="GOA:Q9Z0C8" FT /db_xref="UniProtKB/Swiss-Prot:Q9Z0C8" FT /protein_id="BAA33987.1" FT /translation="MADPVYYQGYQDDGDIDAQKRHQALYLIGIIILIMVCIIILWVCI FT MLACYIPGFLKKTMEAWLSSSSMMKRRVAATITRTPFEATGPERERNWDARRQTNAASS FT QPSNGGVF" FT regulatory 775..780 FT /regulatory_class="polyA_signal_sequence" XX SQ Sequence 985 BP; 283 A; 180 C; 213 G; 309 T; 0 other; ctggggcggg gcttagtatt acccccgccc caggatcagc ggagtcatca cgtgacccgc 60 acatgcctaa tgaatacaat gtatataacc aagtggacat ggtccccacc attatatttg 120 aattaaatgc actgaatata tgccttgctt cgtctcgaag caaagtaagg aataaatggg 180 acccatatga gctgtatccc atgtgcatcg ctttatttgt atggtggaca ttacatagct 240 tttaagcggc gtacatgtta cgcttattct ttgtttataa aaactgaaat gctatcggcc 300 atttctgcta tttctcgcgt tgtttattgt ccgtcgaggc ttcatggcgg atccagtata 360 ttatcaaggt tatcaggacg acggtgatat agatgcccag aagagacatc aagctctata 420 tttgattggc ataatcatat taatcatggt atgtattatt atcctttggg tgtgtataat 480 gttagcgtgt tatattcctg ggtttttgaa gaagacgatg gaagcttggt taagttcttc 540 atctatgatg aagagacgcg tcgcagctac cataacacgc acaccgtttg aggcaacagg 600 acctgagaga gaacggaatt gggatgctcg tagacaaaca aacgctgcat ccagtcagcc 660 ttccaatgga ggagtgtttt agagaatgat tatagtttgt aaagaatcat ttatgtcatc 720 atgctatttg taagttacga aatatcaatg ataatttatg ttatgatgtt gtttcataaa 780 tgaacaagtc tgttgcattc tctctatatg tttcaatgaa gaagaaaact attcactaag 840 acacgtgtta acatatagtt ggtttcgatt gttttacatt actccgcgta cggatatgta 900 ttgggcttgt aagcccaaaa caaatgaggc ccattgtaat atccaatagg gatgacttag 960 tgacgtcata tgatcccttg ctaag 985 // ID AB001026; SV 1; linear; genomic RNA; STD; VRL; 1488 BP. XX AC AB001026; XX DT 22-FEB-1997 (Rel. 51, Created) DT 14-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Tick-borne encephalitis virus genomic RNA for E protein, complete sequence. XX KW E protein; polyprotein precursor. XX OS Tick-borne encephalitis virus OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1488 RA Takashima I.; RT ; RL Submitted (08-JAN-1997) to the INSDC. RL Ikuo Takashima, Hokkaido University, Graduate School of Veterinary RL Medicine; Kita-18, Nishi-9, Kita-Ku, Sapporo, Hokkaido 060, Japan RL (E-mail:takasima@vetmed.hokudai.ac.jp, Tel:011-706-5211, Fax:011-706-5211) XX RN [2] RX PUBMED; 9230360. RA Takashima I., Morita K., Chiba M., Hayasaka D., Sato T., Takezawa C., RA Igarashi A., Kariwa H., Yoshimatsu K., Arikawa J., Hashimoto N.; RT "A case of tick-borne encephalitis in Japan and isolation of the the RT virus"; RL J. Clin. Microbiol. 35(8):1943-1947(1997). XX DR MD5; 588bdc58fdcd5478f6dc0343d2c02a42. DR EuropePMC; PMC3000154; 12781020. XX FH Key Location/Qualifiers FH FT source 1..1488 FT /organism="Tick-borne encephalitis virus" FT /sub_species="Russian spring summer encephalitis virus" FT /strain="Oshima-5-10" FT /mol_type="genomic RNA" FT /db_xref="taxon:11084" FT CDS <1..>1488 FT /codon_start=1 FT /product="polyprotein precursor" FT /db_xref="GOA:P89675" FT /db_xref="InterPro:IPR000336" FT /db_xref="InterPro:IPR011998" FT /db_xref="InterPro:IPR013755" FT /db_xref="InterPro:IPR013756" FT /db_xref="InterPro:IPR014756" FT /db_xref="InterPro:IPR026470" FT /db_xref="InterPro:IPR027287" FT /db_xref="InterPro:IPR036253" FT /db_xref="InterPro:IPR038055" FT /db_xref="InterPro:IPR038345" FT /db_xref="UniProtKB/TrEMBL:P89675" FT /protein_id="BAA19219.1" FT /translation="SRCTHLENRDFVTGTQGTTRVTLVLELGGCVTITAEGKPSMDVWL FT DSIYQENPAKTREYCLHAKLSDTKVAARCPTMGPATLAEEHQSGTVCKRDQSDRGWGNH FT CGLFGKGSIVTCVKASCEAKKKATGHVYDANKIVYTVKVEPHTGDYVAANETHSGRKTA FT SFTVSSEKTILTMGDYGDVSLLCRVASGVDLAQTVILELDKTSEHLPTAWQVHRDWFND FT LALPWKHEGAQNWNNAERLVEFGAPHAVKMDVYNLGDQTGVLLKSLAGVPVAHIDGTKY FT HLKSGHVTCEVGLEKLKMKGLTYTVCDKTKFTWKRIPTDSGHDTVVMEVAFSGTKPCRI FT PVRAVAHGSPDVNVAMLITPNPTIENNGGGFIEMQLPPGDNIIYVGELSHQWFQKGSSI FT GRVFQKTRKGIERLTVIGEHAWDFGSTGGFLTSVGKALHTVLGGAFNSLFGGVGFLPKI FT LVGMALAWLGLNMRNPTMSMSFLLAGGLVLAMTLGVGA" FT mat_peptide 1..1488 FT /product="E protein" FT /note="proteolytic cleavage" XX SQ Sequence 1488 BP; 400 A; 337 C; 428 G; 323 T; 0 other; tcacggtgca cacatctgga aaacagggat tttgtcactg gcactcaggg aaccactcgt 60 gtgaccctgg tgctggaact gggaggatgc gtcaccataa cagctgaggg gaagccctca 120 atggatgtgt ggcttgactc catctaccag gagaatcctg ccaaaacacg tgagtactgc 180 cttcacgcaa agctatcgga taccaaagtc gcggccagat gccctacaat gggacctgcc 240 actttggctg aagagcacca gagtggcaca gtgtgcaaga gagatcagag tgatcgaggc 300 tggggtaatc attgcggatt atttggaaaa ggcagcattg taacctgtgt caaggcgtct 360 tgtgaggcaa aaaagaaagc aacaggacac gtgtatgacg ccaacaaaat tgtgtacaca 420 gttaaagtag agccgcatac gggggattac gtcgctgcta atgagactca cagtggaaga 480 aaaacagcgt ccttcacggt ttcctcggag aagaccatct tgaccatggg agattacgga 540 gacgtgtcct tgttatgcag agttgccagc ggtgttgacc ttgctcagac tgtcatcttg 600 gagcttgaca agacctcaga acacctaccg acggcctggc aggtccaccg ggactggttc 660 aatgatctgg ccctgccgtg gaaacatgag ggagcacaaa actggaacaa cgcggaacgg 720 ctggttgagt ttggagctcc acacgctgtg aaaatggacg tatacaacct tggagaccag 780 actggagtgt tgcttaagtc acttgctggt gttcctgtgg cgcacattga tggaaccaag 840 taccacctga aaagtggcca cgtgacatgc gaggtaggac tagaaaaact taagatgaaa 900 ggtcttacat acacagtgtg cgacaagacg aaattcacat ggaaaagaat tccaacagac 960 agtggacatg atacagtggt catggaggtt gcgttctctg ggaccaaacc ctgtaggatc 1020 ccggtgaggg ccgtggcaca cggctctcca gacgtgaacg tggctatgtt gataacacct 1080 aaccccacaa tcgaaaacaa tggtggtggt ttcatagaaa tgcagttgcc tccaggagac 1140 aatatcatct atgttgggga actgagtcac caatggttcc aaaaagggag tagcatagga 1200 agggtctttc aaaaaaccag gaaaggcata gaaaggctaa cagtgatcgg agaacacgcc 1260 tgggattttg gctctactgg tggtttcctg acttcggttg gtaaggcgct gcacacagtt 1320 cttggcggtg cctttaacag cctttttgga ggagtggggt tcttgcccaa gatcctggtg 1380 ggaatggccc tggcctggtt gggcctgaac atgaggaatc cgaccatgtc catgagcttc 1440 ctcctggctg gaggactggt tctggccatg acactcggag tgggggct 1488 // ID AB001040; SV 1; linear; genomic RNA; STD; VRL; 430 BP. XX AC AB001040; XX DT 01-DEC-1997 (Rel. 53, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Hepatitis C virus (subtype:1b) genomic RNA for polyprotein and 3'UTR, DE partial cds. XX KW 3'X tail. XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-430 RA Tsuchihara K.; RT ; RL Submitted (13-FEB-1997) to the INSDC. RL Katsuya Tsuchihara, Kyoto University, Institute for Virus Research; Shogoin RL Kawahara-cho, Sakyo-ku, Kyoto, Kyoto 605-8507, Japan RL (E-mail:ktsuchih@virus.kyoto-u.ac.jp, Tel:81-75-751-4046, RL Fax:81-75-751-3998) XX RN [2] RX PUBMED; 9261396. RA Tsuchihara K., Tanaka T., Hijikata M., Kuge S., Toyoda H., Nomoto A., RA Yamamoto N., Shimotohno K.; RT "Specific interaction of polypyrimidine tract-binding protein with the RT extreme 3'-terminal structure of the hepatitis C virus genome, the 3'X"; RL J. Virol. 71(9):6720-6726(1997). XX DR MD5; 01888ee530f9e7fa72baad7d5fa8e606. DR RFAM; RF00260; HepC_CRE. DR RFAM; RF00468; HCV_SLVII. DR RFAM; RF00469; HCV_SLIV. DR RFAM; RF00481; HCV_X3. XX FH Key Location/Qualifiers FH FT source 1..430 FT /organism="Hepacivirus C" FT /mol_type="genomic RNA" FT /clone="HCV-JS" FT /note="subtype:1b" FT /db_xref="taxon:11103" FT CDS <1..269 FT /codon_start=3 FT /product="polyprotein" FT /note="C-terminal sequence of polyprotein" FT /db_xref="GOA:O36175" FT /db_xref="UniProtKB/TrEMBL:O36175" FT /protein_id="BAA23646.1" FT /translation="ASGVRAKLLSQGGRAATCCKYLFNWAVKTKLKLTPIPAASRLDLS FT GWFVAGYSGGDIYHSLSRARPCWFMWCLLLLSVGVGIYLLPNR" FT 3'UTR 270..430 FT 3'UTR 333..430 FT /note="3'X tail" XX SQ Sequence 430 BP; 76 A; 123 C; 116 G; 115 T; 0 other; gggccagcgg tgtccgcgct aagttactgt cccagggggg gagggccgcc acttgttgca 60 agtacctctt caactgggca gtaaagacca agcttaaact cactccaatt ccggctgcgt 120 cccggttgga cttgtccggc tggttcgtcg ccggttacag cgggggagac atatatcaca 180 gcctgtctcg cgcccgaccc tgctggttca tgtggtgcct actcctactt tccgtagggg 240 taggcatcta cctgctcccc aaccggtgaa cggggagcta aacactccag gccaataggc 300 cattcttttt tttttttttt tctttcttct ttggtggctc catcttagcc ctagtcacgg 360 ctagctgtga aaggtccgtg agccgcatga ctgcagagag tgctgatact ggcctctctg 420 cagatcatgt 430 // ID AB001113; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001113; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 735c083d9cd66ec8fd8eb3c06696c0e0. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in March, 1992. Other 6 FT clones had the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788E7" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788E7" FT /protein_id="BAA75934.1" FT /translation="CTRPNNNTRKGIHIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 17 C; 20 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001114; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001114; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 378d4fa1103fd4a5d6cc69bd98eddbfb. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in March, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788E6" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788E6" FT /protein_id="BAA75935.1" FT /translation="CTRPNNNTRKGIHIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 16 C; 20 G; 22 T; 0 other; tgtacaagac ccaataacaa tacaagaaaa ggtatacata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001115; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001115; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 17fac4a0edec4932a88636529ed471ed. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in March, 1992. Other 2 FT clones had the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788E5" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788E5" FT /protein_id="BAA75936.1" FT /translation="CTRPNNNTRKGIHIGPGRAVFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 17 C; 21 G; 20 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagagcagta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001116; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001116; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 038c2a21f121ac69ceae61d6897bdd2c. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in March, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788E4" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788E4" FT /protein_id="BAA75937.1" FT /translation="CTRPNNNTRKGIHIGPGRAVFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 18 C; 21 G; 19 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagagcagta 60 ttctatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001117; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001117; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 5ec63f78db0c56e7209466162911aeba. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in March, 1992. Other 2 FT clones had the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788E3" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788E3" FT /protein_id="BAA75938.1" FT /translation="CTRPNNNTRKGINIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 48 A; 16 C; 20 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtataaata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001118; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001118; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; dc955df79c6c02c76076f63af643ece9. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in March, 1992. Other 2 FT clones had the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788E2" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788E2" FT /protein_id="BAA75939.1" FT /translation="CTRPNNNTRKGIHIGPGRALFYATDIIGDIRQTHC" XX SQ Sequence 105 BP; 48 A; 17 C; 19 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaaacac attgt 105 // ID AB001119; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001119; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 8e4d8b6972638534b1a9a7a82e9c4f48. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in March, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q9YMB4" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q9YMB4" FT /protein_id="BAA75940.1" FT /translation="CTRPNNNTRKGIHIGPGRAVFYATDIIGDVRQAHC" XX SQ Sequence 105 BP; 46 A; 17 C; 22 G; 20 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagagcagta 60 ttttatgcaa cagacataat aggagatgta agacaagcac attgt 105 // ID AB001120; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001120; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 735c083d9cd66ec8fd8eb3c06696c0e0. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in December, 1992 .Other 2 FT clones had the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788E1" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788E1" FT /protein_id="BAA75941.1" FT /translation="CTRPNNNTRKGIHIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 17 C; 20 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001121; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001121; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 378d4fa1103fd4a5d6cc69bd98eddbfb. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in December, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788E0" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788E0" FT /protein_id="BAA75942.1" FT /translation="CTRPNNNTRKGIHIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 16 C; 20 G; 22 T; 0 other; tgtacaagac ccaataacaa tacaagaaaa ggtatacata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001122; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001122; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; a36ccc2a4d1f1325800b6ce6ddb1b068. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in December, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788D9" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788D9" FT /protein_id="BAA75943.1" FT /translation="CTRPNNNTRKGIHIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 46 A; 16 C; 21 G; 22 T; 0 other; tgtacaagac ccaataacaa tacaagaaaa ggtatacata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggggatata agacaagcac attgt 105 // ID AB001123; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001123; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 5ec63f78db0c56e7209466162911aeba. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in December, 1992. Other 2 FT clones had the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788D8" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788D8" FT /protein_id="BAA75944.1" FT /translation="CTRPNNNTRKGINIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 48 A; 16 C; 20 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtataaata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001124; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001124; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 4104b17255c0be2390dd8b79a2e854aa. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in December, 1992. Another FT clone had the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788D7" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788D7" FT /protein_id="BAA75945.1" FT /translation="CTRPNNNTRKGIHIGPGRGLFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 16 C; 21 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagaggatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001125; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001125; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 17fac4a0edec4932a88636529ed471ed. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in December, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788D6" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788D6" FT /protein_id="BAA75946.1" FT /translation="CTRPNNNTRKGIHIGPGRAVFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 17 C; 21 G; 20 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagagcagta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001126; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001126; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 314480af9d98612ab6250cff7afbd6a8. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in December, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q9YMB3" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q9YMB3" FT /protein_id="BAA75947.1" FT /translation="CTRPNNNTRKGIHIGPGRALFYATDIIRDIRQAHC" XX SQ Sequence 105 BP; 48 A; 16 C; 19 G; 22 T; 0 other; tgtacaagac ccaataacaa tacaagaaaa ggtatacata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aagagatata agacaagcac attgt 105 // ID AB001127; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001127; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; ee69f5541d7f3b5b5e5dd48c97f17679. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in December, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q9YMB2" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q9YMB2" FT /protein_id="BAA75948.1" FT /translation="CTRPNNNTRRGIHIGPGRGLFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 46 A; 16 C; 22 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaga ggtatacata taggaccagg gagaggatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001128; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001128; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; ce6136ab4f118c586c29b54346eaeeeb. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in January, 1994. Other 9 FT clones had the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788D5" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788D5" FT /protein_id="BAA75949.1" FT /translation="CTRPNNNTRKGIHIGPGRGVFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 16 C; 22 G; 20 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagaggagta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001129; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001129; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 4104b17255c0be2390dd8b79a2e854aa. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in January, 1994. Another FT clone had the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788D4" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788D4" FT /protein_id="BAA75950.1" FT /translation="CTRPNNNTRKGIHIGPGRGLFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 16 C; 21 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagaggatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001130; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001130; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 17fac4a0edec4932a88636529ed471ed. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in January, 1994." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788D3" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788D3" FT /protein_id="BAA75951.1" FT /translation="CTRPNNNTRKGIHIGPGRAVFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 17 C; 21 G; 20 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagagcagta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001131; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001131; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 5ec63f78db0c56e7209466162911aeba. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in February, 1994. Other 3 FT clones had the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788D2" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788D2" FT /protein_id="BAA75952.1" FT /translation="CTRPNNNTRKGINIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 48 A; 16 C; 20 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtataaata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001132; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001132; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 4104b17255c0be2390dd8b79a2e854aa. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in February, 1994." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788D1" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788D1" FT /protein_id="BAA75953.1" FT /translation="CTRPNNNTRKGIHIGPGRGLFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 16 C; 21 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagaggatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001133; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001133; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 21aee4b4d07885092fd36a729595e2a5. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in February, 1994." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788D0" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788D0" FT /protein_id="BAA75954.1" FT /translation="CTRPNNNTRKGIHIGPGRGLFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 46 A; 16 C; 22 G; 21 T; 0 other; tgtacgagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagaggatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001134; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001134; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; e8c6186cf42b12578905ecc17da0e435. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in February, 1994." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788C9" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788C9" FT /protein_id="BAA75955.1" FT /translation="CTRPNNNTRKGIHIGPGRGLFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 46 A; 16 C; 22 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagaggatta 60 ttttatgcaa cagacataat aggagatata aggcaagcac attgt 105 // ID AB001135; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001135; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; aec2e04d01d214c73e482be5583af3af. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in February, 1994. Another FT clone had the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788C8" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788C8" FT /protein_id="BAA75956.1" FT /translation="CTRPNNNTRKGVHIGPGRAVFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 46 A; 17 C; 22 G; 20 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtgtacata taggaccagg gagagcagta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001136; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001136; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 735c083d9cd66ec8fd8eb3c06696c0e0. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in February, 1994." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788C7" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788C7" FT /protein_id="BAA75957.1" FT /translation="CTRPNNNTRKGIHIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 17 C; 20 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001137; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001137; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 5ec63f78db0c56e7209466162911aeba. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human spleen" FT /proviral FT /note="isolated from spleen proviruses. Other 2 clones had FT the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788C6" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788C6" FT /protein_id="BAA75958.1" FT /translation="CTRPNNNTRKGINIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 48 A; 16 C; 20 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtataaata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001138; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001138; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 09dc3d32b67a921afc1b20214e260638. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human spleen" FT /proviral FT /note="isolated from spleen proviruses. Another clone had FT the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q9W9E4" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q9W9E4" FT /protein_id="BAA75959.1" FT /translation="CTRPNNNTRKGINIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 48 A; 15 C; 20 G; 22 T; 0 other; tgtacaagac ccaataacaa tacaagaaaa ggtataaata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001139; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001139; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 4104b17255c0be2390dd8b79a2e854aa. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human spleen" FT /proviral FT /note="isolated from spleen proviruses. Other 2 clones had FT the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q9W9Z5" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q9W9Z5" FT /protein_id="BAA75960.1" FT /translation="CTRPNNNTRKGIHIGPGRGLFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 16 C; 21 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagaggatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001140; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001140; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 85eafc36bc383f91236ebcc70789a2e1. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human spleen" FT /proviral FT /note="isolated from spleen proviruses." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788C5" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788C5" FT /protein_id="BAA75961.1" FT /translation="CTRPNNNTRKGIRIGPGRAVFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 46 A; 17 C; 22 G; 20 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacgta taggaccagg gagagcagta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001141; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001141; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; d956e7bbc267579df3702b46a079c28c. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human spleen" FT /proviral FT /note="isolated from spleen proviruses." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q9YJA8" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q9YJA8" FT /protein_id="BAA75962.1" FT /translation="CTRPNNNTRKGIRIGPGRAVFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 46 A; 16 C; 22 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacgta taggaccagg gagagcagta 60 ttttatgcaa cagatataat aggagatata agacaagcac attgt 105 // ID AB001142; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001142; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 17fac4a0edec4932a88636529ed471ed. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human spleen" FT /proviral FT /note="isolated from spleen proviruses. Another clone had FT the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q9YIW4" FT /db_xref="InterPro:IPR000777" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q9YIW4" FT /protein_id="BAA75963.1" FT /translation="CTRPNNNTRKGIHIGPGRAVFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 17 C; 21 G; 20 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagagcagta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001143; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001143; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; aec2e04d01d214c73e482be5583af3af. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human spleen" FT /proviral FT /note="isolated from spleen proviruses." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q9YJD5" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q9YJD5" FT /protein_id="BAA75964.1" FT /translation="CTRPNNNTRKGVHIGPGRAVFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 46 A; 17 C; 22 G; 20 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtgtacata taggaccagg gagagcagta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001144; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001144; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 735c083d9cd66ec8fd8eb3c06696c0e0. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human spleen" FT /proviral FT /note="isolated from spleen proviruses." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788C4" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788C4" FT /protein_id="BAA75965.1" FT /translation="CTRPNNNTRKGIHIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 17 C; 20 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001145; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001145; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; c994f239a66c26b7b04c1eccf1cf3721. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human spleen" FT /proviral FT /note="isolated from spleen proviruses." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q9WAE6" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q9WAE6" FT /protein_id="BAA75966.1" FT /translation="CTRPNNNTRKGVHIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 46 A; 17 C; 21 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtgtacata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001146; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001146; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 70a3ba70339ba2cb35faed5834bc2cab. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human spleen" FT /proviral FT /note="isolated from spleen proviruses." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q9YMB1" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q9YMB1" FT /protein_id="BAA75967.1" FT /translation="CTRPNNNTRKGVYIGPGRAVFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 46 A; 16 C; 22 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtgtatata taggaccagg gagagcagta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001147; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001147; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; cda3d2119335343395536873ea90def7. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human spleen" FT /proviral FT /note="isolated from spleen proviruses." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q9YMB0" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q9YMB0" FT /protein_id="BAA75968.1" FT /translation="CTRPNNNTRKGINIGPGRGLFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 48 A; 15 C; 21 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtataaata taggaccagg gagaggatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001148; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001148; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; dc955df79c6c02c76076f63af643ece9. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human CSF" FT /note="isolated from CSF taken in March,1992. Other 4 FT clones had the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q9YIU4" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q9YIU4" FT /protein_id="BAA75969.1" FT /translation="CTRPNNNTRKGIHIGPGRALFYATDIIGDIRQTHC" XX SQ Sequence 105 BP; 48 A; 17 C; 19 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaaacac attgt 105 // ID AB001149; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001149; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 735c083d9cd66ec8fd8eb3c06696c0e0. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human CSF" FT /note="isolated from CSF taken in March, 1992. Another FT clone had the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788C3" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788C3" FT /protein_id="BAA75970.1" FT /translation="CTRPNNNTRKGIHIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 17 C; 20 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001150; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001150; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 378d4fa1103fd4a5d6cc69bd98eddbfb. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human CSF" FT /note="isolated from CSF taken in March, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788C2" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788C2" FT /protein_id="BAA75971.1" FT /translation="CTRPNNNTRKGIHIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 16 C; 20 G; 22 T; 0 other; tgtacaagac ccaataacaa tacaagaaaa ggtatacata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001151; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001151; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; ccf2d5cbb5a73e19f871c457c3b18278. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human CSF" FT /note="isolated from CSF taken in March, 1992. Other 2 FT clones had the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q9WAE7" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q9WAE7" FT /protein_id="BAA75972.1" FT /translation="CTRPNNNTRKGIHIGPGRALFYATDIIGGIRQAHC" XX SQ Sequence 105 BP; 46 A; 17 C; 21 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggaggtata agacaagcac attgt 105 // ID AB001152; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001152; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; ce6136ab4f118c586c29b54346eaeeeb. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human CSF" FT /note="isolated from CSF taken in December, 1992. Other 12 FT clones had the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788C1" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788C1" FT /protein_id="BAA75973.1" FT /translation="CTRPNNNTRKGIHIGPGRGVFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 16 C; 22 G; 20 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagaggagta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001153; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001153; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 4cd6b547bf957f676bb9cbb045f7399b. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human CSF" FT /note="isolated from CSF taken in December, 1992. Another FT clone had the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788C0" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788C0" FT /protein_id="BAA75974.1" FT /translation="CTRPNNNTRKGIHIGPGRGVFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 46 A; 16 C; 23 G; 20 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagaggagta 60 ttttatgcga cagacataat aggagatata agacaagcac attgt 105 // ID AB001154; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001154; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 34d74f59c9f73666dc6cb1e8d58552af. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human CSF" FT /note="isolated from CSF taken in December, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788B9" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788B9" FT /protein_id="BAA75975.1" FT /translation="CTRPNNNTRKGIHIGPGRGVFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 15 C; 22 G; 21 T; 0 other; tgtacaagac ctaacaacaa tacaagaaaa ggtatacata taggaccagg gagaggagta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001155; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001155; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 56049a76b289dc103591863e55216729. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human CSF" FT /note="isolated from CSF taken in December, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788B8" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788B8" FT /protein_id="BAA75976.1" FT /translation="CTRPNNNTRKGIHIGPGRGVFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 17 C; 22 G; 19 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagaggagta 60 ttttatgcaa cagacataat aggagatata agacaagcac actgt 105 // ID AB001156; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001156; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 05491790fe9fcba59c56d198daba26a2. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human CSF" FT /note="isolated from CSF taken in December, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q9YMA9" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q9YMA9" FT /protein_id="BAA75977.1" FT /translation="CTRPNNNTRKGIHIGPGRGVFYATDIIGDIRQAHR" XX SQ Sequence 105 BP; 47 A; 17 C; 22 G; 19 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagaggagta 60 ttttatgcaa cagacataat aggagatata agacaagcac atcgt 105 // ID AB001157; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001157; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; ce6136ab4f118c586c29b54346eaeeeb. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human CSF" FT /note="isolated from CSF taken in January, 1994. Other 8 FT clones had the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q9YJQ6" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q9YJQ6" FT /protein_id="BAA75978.1" FT /translation="CTRPNNNTRKGIHIGPGRGVFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 16 C; 22 G; 20 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagaggagta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001158; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001158; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 39bfab5749ce7799561bbd1c0d3e6736. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human CSF" FT /note="isolated from CSF taken in January, 1994." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q9YMA8" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q9YMA8" FT /protein_id="BAA75979.1" FT /translation="CTRPNNNTRKGIHIGPGKGVFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 48 A; 17 C; 21 G; 19 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gaaaggagta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgc 105 // ID AB001159; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001159; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 378d4fa1103fd4a5d6cc69bd98eddbfb. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human CSF" FT /note="isolated from CSF taken in February,1994.Other 15 FT clones had the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788B7" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788B7" FT /protein_id="BAA75980.1" FT /translation="CTRPNNNTRKGIHIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 16 C; 20 G; 22 T; 0 other; tgtacaagac ccaataacaa tacaagaaaa ggtatacata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001160; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001160; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; 2d37d6e0f85dae114e0512ce45e43f43. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human CSF" FT /note="isolated from CSF taken in February, 1994." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788B6" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788B6" FT /protein_id="BAA75981.1" FT /translation="CTRPNNNTRKGIHIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 17 C; 20 G; 21 T; 0 other; tgtacaagac ccaataacaa tacaagaaaa ggtatacata taggaccagg gagagcacta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001161; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001161; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; c575ff415cccf1667400bb2e43501cec. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human CSF" FT /note="isolated from CSF taken in February, 1994." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q9YMA7" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q9YMA7" FT /protein_id="BAA75982.1" FT /translation="CTRPNNNTRKGIHIGPRRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 48 A; 16 C; 19 G; 22 T; 0 other; tgtacaagac ccaataacaa tacaagaaaa ggtatacata taggaccaag gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001162; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001162; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RA Gatanaga H., Oka S., Ida S., Iwamoto A.; RT "Serial Accumulation of HIV-1 Proviruses in the Brain"; RL Unpublished. XX DR MD5; a48fb87d092de6d70e4a004805b32762. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /mol_type="genomic RNA" FT /isolation_source="human CSF" FT /note="isolated from CSF taken in February, 1994." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q9YMA6" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q9YMA6" FT /protein_id="BAA75983.1" FT /translation="CTRPNNNTRKGIHIGPGRASFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 17 C; 20 G; 21 T; 0 other; tgtacaagac ccaataacaa tacaagaaaa ggtatacata taggaccagg gagagcatca 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001163; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001163; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 735c083d9cd66ec8fd8eb3c06696c0e0. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human brain" FT /proviral FT /note="isolated from brain proviruses. Other 13 clones had FT the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788B5" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788B5" FT /protein_id="BAA75984.1" FT /translation="CTRPNNNTRKGIHIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 47 A; 17 C; 20 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001164; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001164; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; deeed98745d713c6b0785414e2e1576c. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human brain" FT /proviral FT /note="isolated from brain proviruses. Another clone had FT the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788B4" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788B4" FT /protein_id="BAA75985.1" FT /translation="CTRPNNNTRKGIHIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 46 A; 17 C; 20 G; 22 T; 0 other; tgtacaagac ccaacaacaa tactagaaaa ggtatacata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001165; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001165; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; b41404ee061a44bf7d6db183af14acba. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human brain" FT /proviral FT /note="isolated from brain proviruses." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788B3" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788B3" FT /protein_id="BAA75986.1" FT /translation="CTRPNNNTRKGIHIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 46 A; 17 C; 21 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacgagaaaa ggtatacata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001166; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001166; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 98fa8b3323264425d91b2286fd04f058. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human brain" FT /proviral FT /note="isolated from brain proviruses." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788B2" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788B2" FT /protein_id="BAA75987.1" FT /translation="CTRPNNNTRKGIHIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 46 A; 17 C; 21 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata tagggccagg gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001167; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001167; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; a3859666ab33e79d113b71620f4d488c. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human brain" FT /proviral FT /note="isolated from brain proviruses." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q788B1" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q788B1" FT /protein_id="BAA75988.1" FT /translation="CTRPNNNTRKGIHIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 46 A; 17 C; 21 G; 21 T; 0 other; tgtacaagac ccaacaacaa tacaagaaaa ggtatacata taggaccagg gagggcatta 60 ttttatgcaa cagacataat aggagatata agacaagcac attgt 105 // ID AB001168; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001168; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Human immunodeficiency virus 1 env gene for envelope glycoprotein, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; ec0c84a5c1bb75ba0da2d80e109f74d7. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human brain" FT /proviral FT /note="isolated from brain proviruses." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="env" FT /product="envelope glycoprotein" FT /note="V3 region" FT /db_xref="GOA:Q9W8P9" FT /db_xref="InterPro:IPR036377" FT /db_xref="UniProtKB/TrEMBL:Q9W8P9" FT /protein_id="BAA75989.1" FT /translation="CTRPNNNTRKGIHIGPGRALFYATDIIGDIRQAHC" XX SQ Sequence 105 BP; 45 A; 18 C; 21 G; 21 T; 0 other; tgtactagac ccaacaacaa tacaaggaaa ggtatacata taggaccagg gagagcatta 60 ttttatgcaa cagacataat aggagatata agacaagcac actgt 105 // ID AB001169; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001169; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; e5d20cb46ab1e0f9cea9c660a5520c4c. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in March, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 41-75" FT /db_xref="GOA:Q9YMA5" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q9YMA5" FT /protein_id="BAA75990.1" FT /translation="MEKEGKISKIGPENPYNTPVFGIKKKDRTKWRKLV" XX SQ Sequence 105 BP; 50 A; 12 C; 22 G; 21 T; 0 other; atggaaaagg aaggaaaaat ttcaaaaatt gggcctgaaa atccatacaa tactccagta 60 tttggcataa agaaaaagga caggactaaa tggagaaaat tagta 105 // ID AB001170; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001170; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 25c8149498348069a0d91da11f09c6cd. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in March, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 41-75" FT /db_xref="GOA:Q9YMA4" FT /db_xref="UniProtKB/TrEMBL:Q9YMA4" FT /protein_id="BAA75991.1" FT /translation="MEKEGKISQIGSENPYNTPVFGIKKKDSTKSRKLV" XX SQ Sequence 105 BP; 49 A; 14 C; 20 G; 22 T; 0 other; atggaaaagg aaggaaaaat ctcacaaatt gggtctgaaa atccatacaa tactccagta 60 tttggcataa agaaaaagga cagtactaaa tcgagaaaat tagta 105 // ID AB001171; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001171; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; d407b94ad816e0599d4a9c97534933b8. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in March, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 41-75" FT /db_xref="GOA:Q9YMA3" FT /db_xref="UniProtKB/TrEMBL:Q9YMA3" FT /protein_id="BAA75992.1" FT /translation="MEKEGKISQIGPENPHNTPVLGIKKKDRTKWRKLG" XX SQ Sequence 105 BP; 49 A; 14 C; 24 G; 18 T; 0 other; atggaaaagg aaggaaaaat ttcacaaatt gggcctgaaa atccacacaa tactccagta 60 ttgggcataa agaaaaagga caggactaaa tggagaaaat tagga 105 // ID AB001172; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001172; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; bb466c90e2ffe55abeb5b31a44854597. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in March, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 41-75" FT /db_xref="GOA:Q9YMA2" FT /db_xref="UniProtKB/TrEMBL:Q9YMA2" FT /protein_id="BAA75993.1" FT /translation="MEKEGKIAHLGPDNPYNTPALGIKKKDRTKWRKLG" XX SQ Sequence 105 BP; 46 A; 15 C; 26 G; 18 T; 0 other; atggaaaagg aagggaaaat agcacatctt gggcctgata atccatacaa tactccagca 60 ttgggcataa agaaaaagga caggactaaa tggagaaaat tagga 105 // ID AB001173; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001173; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 21b6880cdd8cdc84aa4c5a31005f867e. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in March, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 41-75" FT /db_xref="GOA:Q9YMA1" FT /db_xref="UniProtKB/TrEMBL:Q9YMA1" FT /protein_id="BAA75994.1" FT /translation="MEKEGKISQIGPDNPYNTLVFGIKKMDRTKWRKLV" XX SQ Sequence 105 BP; 47 A; 11 C; 22 G; 25 T; 0 other; atggaaaagg aaggaaaaat ttcacaaatt gggcctgata atccatacaa tactctagta 60 tttggcataa agaaaatgga taggactaaa tggagaaaat tagta 105 // ID AB001174; SV 1; linear; genomic RNA; STD; VRL; 117 BP. XX AC AB001174; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-117 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 5a109a0ad60dcc54cf29d180490e37ef. XX FH Key Location/Qualifiers FH FT source 1..117 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in March, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>117 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 181-219" FT /db_xref="GOA:Q788B0" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q788B0" FT /protein_id="BAA75995.1" FT /translation="YQYMDDLYVGSDLEIGQHRTKIEELREHLLRWGFTTPDK" XX SQ Sequence 117 BP; 45 A; 15 C; 29 G; 28 T; 0 other; tatcaataca tggatgattt gtatgtagga tctgacttag aaatagggca gcataggaca 60 aaaatagagg aactgagaga acatctgtta aggtggggat ttaccacacc agataaa 117 // ID AB001175; SV 1; linear; genomic RNA; STD; VRL; 117 BP. XX AC AB001175; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-117 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 43486e5902ae6d7bf4901d8aca611b2f. XX FH Key Location/Qualifiers FH FT source 1..117 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in March, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>117 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 181-219" FT /db_xref="GOA:Q788A9" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q788A9" FT /protein_id="BAA75996.1" FT /translation="YQYMDDLYVGSDLEIGQHRIKIEELREHLLRWGFTTPDK" XX SQ Sequence 117 BP; 45 A; 15 C; 29 G; 28 T; 0 other; tatcaataca tggatgattt gtatgtagga tctgacttag aaatagggca gcataggata 60 aaaatagagg aactgagaga acatctgtta aggtggggat ttaccacacc agacaaa 117 // ID AB001176; SV 1; linear; genomic RNA; STD; VRL; 117 BP. XX AC AB001176; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-117 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 4f6a146b0ee9e31766f2685a4da77ad8. XX FH Key Location/Qualifiers FH FT source 1..117 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in March, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>117 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 181-219" FT /db_xref="GOA:Q9YMA0" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q9YMA0" FT /protein_id="BAA75997.1" FT /translation="YQYMDDLYVGSDLEIGQHRIRIEELREHLLRWGFTTPDK" XX SQ Sequence 117 BP; 44 A; 15 C; 30 G; 28 T; 0 other; tatcaataca tggatgattt gtatgtagga tctgacttag aaatagggca gcataggata 60 agaatagagg aactgagaga acatctgtta aggtggggat ttaccacacc agacaaa 117 // ID AB001177; SV 1; linear; genomic RNA; STD; VRL; 117 BP. XX AC AB001177; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-117 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; a05754e76bfa7760afa6264db00a2199. XX FH Key Location/Qualifiers FH FT source 1..117 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in March, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>117 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 181-219" FT /db_xref="GOA:Q788A8" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q788A8" FT /protein_id="BAA75998.1" FT /translation="YQYMDDLYVGSDLEIGQHRIKIEELREHLLRWGFTTPDK" XX SQ Sequence 117 BP; 46 A; 15 C; 28 G; 28 T; 0 other; tatcaataca tggatgattt gtatgtagga tctgacttag aaataggaca gcataggata 60 aaaatagagg aactgagaga acatctgtta aggtggggat ttaccacacc agacaaa 117 // ID AB001178; SV 1; linear; genomic RNA; STD; VRL; 117 BP. XX AC AB001178; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-117 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 43486e5902ae6d7bf4901d8aca611b2f. XX FH Key Location/Qualifiers FH FT source 1..117 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in March, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>117 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 181-219" FT /db_xref="GOA:Q9YIS4" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q9YIS4" FT /protein_id="BAA75999.1" FT /translation="YQYMDDLYVGSDLEIGQHRIKIEELREHLLRWGFTTPDK" XX SQ Sequence 117 BP; 45 A; 15 C; 29 G; 28 T; 0 other; tatcaataca tggatgattt gtatgtagga tctgacttag aaatagggca gcataggata 60 aaaatagagg aactgagaga acatctgtta aggtggggat ttaccacacc agacaaa 117 // ID AB001179; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001179; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 488cba4b5202b4b82652bf7d297fe370. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in December, 1992. Other 5 FT clones had the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 41-75" FT /db_xref="GOA:Q788A7" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q788A7" FT /protein_id="BAA76000.1" FT /translation="LEKEGKISKIGPENPYNTPVFAIKKKNSTRWRKLV" XX SQ Sequence 105 BP; 49 A; 14 C; 20 G; 22 T; 0 other; ctggaaaagg aaggaaaaat ttcaaaaatt gggcctgaaa atccatacaa tactccagta 60 tttgccataa agaaaaagaa cagtactaga tggagaaaat tagta 105 // ID AB001180; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001180; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; e8f2f5abeab0dc624585038c771f037e. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in December, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 41-75" FT /db_xref="GOA:Q788A6" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q788A6" FT /protein_id="BAA76001.1" FT /translation="LEKEGKISKIGPENPYNTPVFAIKKKNSTRWRKLV" XX SQ Sequence 105 BP; 48 A; 14 C; 21 G; 22 T; 0 other; ctggaaaagg aaggaaaaat ttcaaaaatt gggcctgaaa atccatacaa tactccagta 60 tttgccataa agaagaagaa cagtactaga tggagaaaat tagta 105 // ID AB001181; SV 1; linear; genomic RNA; STD; VRL; 105 BP. XX AC AB001181; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 077084181e401dfef1afbfc2babeccf7. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in December, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 41-75" FT /db_xref="GOA:Q788A5" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q788A5" FT /protein_id="BAA76002.1" FT /translation="LEKEGKISKIGPENPYNTPVFAIKKKNSTRWRKLV" XX SQ Sequence 105 BP; 50 A; 13 C; 19 G; 23 T; 0 other; ttagaaaagg aaggaaaaat ttcaaaaatt gggcctgaaa atccatacaa tactccagta 60 tttgccataa agaaaaagaa cagtactaga tggagaaaat tagta 105 // ID AB001182; SV 1; linear; genomic RNA; STD; VRL; 117 BP. XX AC AB001182; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-117 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 3a1b00785893c839308d866734809337. XX FH Key Location/Qualifiers FH FT source 1..117 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in December, 1992. Other 4 FT clones had the same sequence." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>117 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 181-219" FT /db_xref="GOA:Q788A4" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q788A4" FT /protein_id="BAA76003.1" FT /translation="YQYMDDLYVGSDLEIGQHRTKIEELREHLLRWGFYTPDK" XX SQ Sequence 117 BP; 45 A; 15 C; 29 G; 28 T; 0 other; tatcaataca tggatgattt gtatgtagga tctgacttag aaatagggca gcataggaca 60 aaaatagagg aactgagaga acatctgtta aggtggggat tttacacacc agacaaa 117 // ID AB001183; SV 1; linear; genomic RNA; STD; VRL; 117 BP. XX AC AB001183; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-117 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; a4ccc652c2fe6947df5f451c1d92862d. XX FH Key Location/Qualifiers FH FT source 1..117 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in December, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>117 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 181-219" FT /db_xref="GOA:Q9YM99" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q9YM99" FT /protein_id="BAA76004.1" FT /translation="YQYMNDLYVESDLEIGQHRTRIEELREHFLRWGFYTPDK" XX SQ Sequence 117 BP; 44 A; 14 C; 29 G; 30 T; 0 other; tatcaataca tgaatgattt gtatgtggaa tctgacttag aaatagggca gcataggacg 60 agaatagagg aactgagaga acatttttta aggtggggat tttacacacc agacaaa 117 // ID AB001184; SV 1; linear; genomic RNA; STD; VRL; 117 BP. XX AC AB001184; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-117 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; da0a9277297ff4236d40ad73e2698ed3. XX FH Key Location/Qualifiers FH FT source 1..117 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in December, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>117 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 181-219" FT /db_xref="GOA:Q9YM98" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q9YM98" FT /protein_id="BAA76005.1" FT /translation="YQYMDDLYVGSDLEIGQHRTGIEELRGHLLRWGFYTPYK" XX SQ Sequence 117 BP; 40 A; 15 C; 33 G; 29 T; 0 other; tatcaataca tggatgattt gtatgtagga tctgacttag aaatagggca gcataggaca 60 ggaatagagg agctgagagg acatctgtta aggtggggat tttacacacc atacaag 117 // ID AB001185; SV 1; linear; genomic RNA; STD; VRL; 117 BP. XX AC AB001185; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-117 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; af8ec8648d3782c4acddccf48dc5085b. XX FH Key Location/Qualifiers FH FT source 1..117 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic RNA" FT /isolation_source="human serum" FT /note="isolated from serum taken in December, 1992." FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>117 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 181-219" FT /db_xref="GOA:Q9YM97" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q9YM97" FT /protein_id="BAA76006.1" FT /translation="CQYMDDLYVGSNLEIGQHRTKIEELREHLLRWGFYTPDK" XX SQ Sequence 117 BP; 45 A; 15 C; 29 G; 28 T; 0 other; tgtcaataca tggatgattt gtatgtagga tctaacttag aaatagggca gcataggaca 60 aaaatagagg aactgagaga acatctgtta aggtggggat tttacacacc agacaaa 117 // ID AB001186; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001186; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds, clone: SP-01. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; ea57043429b69f11c3a4d29f2fd7de6b. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human spleen" FT /clone="SP-01" FT /proviral FT /note="isolated from spleen proviruses" FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 41-75" FT /db_xref="GOA:Q9YM96" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q9YM96" FT /protein_id="BAA76007.1" FT /translation="LEKEGKISKIGPENPYNTPVFAIKKKNSTRLRKLV" XX SQ Sequence 105 BP; 49 A; 14 C; 19 G; 23 T; 0 other; ctggaaaagg aaggaaaaat ttcaaaaatt gggcctgaaa atccatacaa tactccagta 60 tttgccataa agaaaaagaa cagtactaga ttgagaaaat tagta 105 // ID AB001187; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001187; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds, clone: SP-02. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 488cba4b5202b4b82652bf7d297fe370. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human spleen" FT /clone="SP-02" FT /proviral FT /note="isolated from spleen proviruses" FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 41-75" FT /db_xref="GOA:Q788A3" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q788A3" FT /protein_id="BAA76008.1" FT /translation="LEKEGKISKIGPENPYNTPVFAIKKKNSTRWRKLV" XX SQ Sequence 105 BP; 49 A; 14 C; 20 G; 22 T; 0 other; ctggaaaagg aaggaaaaat ttcaaaaatt gggcctgaaa atccatacaa tactccagta 60 tttgccataa agaaaaagaa cagtactaga tggagaaaat tagta 105 // ID AB001188; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001188; XX DT 15-MAR-1999 (Rel. 59, Created) DT 02-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds, clone: SP-03. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 488cba4b5202b4b82652bf7d297fe370. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human spleen" FT /clone="SP-03" FT /proviral FT /note="isolated from spleen proviruses" FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 41-75" FT /db_xref="GOA:Q788A2" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q788A2" FT /protein_id="BAA76009.1" FT /translation="LEKEGKISKIGPENPYNTPVFAIKKKNSTRWRKLV" XX SQ Sequence 105 BP; 49 A; 14 C; 20 G; 22 T; 0 other; ctggaaaagg aaggaaaaat ttcaaaaatt gggcctgaaa atccatacaa tactccagta 60 tttgccataa agaaaaagaa cagtactaga tggagaaaat tagta 105 // ID AB001189; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001189; XX DT 15-MAR-1999 (Rel. 59, Created) DT 27-JAN-2009 (Rel. 99, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds, clone: SP-04. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 488cba4b5202b4b82652bf7d297fe370. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human spleen" FT /clone="SP-04" FT /proviral FT /note="isolated from spleen proviruses" FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 41-75" FT /db_xref="GOA:Q788A1" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q788A1" FT /protein_id="BAA76010.1" FT /translation="LEKEGKISKIGPENPYNTPVFAIKKKNSTRWRKLV" XX SQ Sequence 105 BP; 49 A; 14 C; 20 G; 22 T; 0 other; ctggaaaagg aaggaaaaat ttcaaaaatt gggcctgaaa atccatacaa tactccagta 60 tttgccataa agaaaaagaa cagtactaga tggagaaaat tagta 105 // ID AB001190; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001190; XX DT 15-MAR-1999 (Rel. 59, Created) DT 27-JAN-2009 (Rel. 99, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds, clone: SP-05. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 2cf29de6dba1673fbd1b2b8dae3f0b9a. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human spleen" FT /clone="SP-05" FT /proviral FT /note="isolated from spleen proviruses" FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 41-75" FT /db_xref="GOA:Q9YM95" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q9YM95" FT /protein_id="BAA76011.1" FT /translation="LEKKGKISKIGPENPYNTPVFAIKKKNSTRWRKLV" XX SQ Sequence 105 BP; 50 A; 14 C; 19 G; 22 T; 0 other; ctggaaaaga aaggaaaaat ttcaaaaatt gggcctgaaa atccatacaa tactccagta 60 tttgccataa agaaaaagaa cagtactaga tggagaaaat tagta 105 // ID AB001191; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001191; XX DT 15-MAR-1999 (Rel. 59, Created) DT 27-JAN-2009 (Rel. 99, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds, clone: SP-06. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; d6005c6a5e561956be902e6b88f3a258. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human spleen" FT /clone="SP-06" FT /proviral FT /note="isolated from spleen proviruses" FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 41-75" FT /db_xref="GOA:Q788A0" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q788A0" FT /protein_id="BAA76012.1" FT /translation="LEKEGKISKIGPENPYNTPVFAIKKKNSTRWRKLV" XX SQ Sequence 105 BP; 48 A; 14 C; 21 G; 22 T; 0 other; ctggaaaagg aaggaaaaat ttcaaaaatt gggcctgaga atccatacaa tactccagta 60 tttgccataa agaaaaagaa cagtactaga tggagaaaat tagta 105 // ID AB001192; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001192; XX DT 15-MAR-1999 (Rel. 59, Created) DT 27-JAN-2009 (Rel. 99, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds, clone: SP-07. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 749867fc89d48425217eff2c3e6b53b7. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human spleen" FT /clone="SP-07" FT /proviral FT /note="isolated from spleen proviruses" FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 41-75" FT /db_xref="GOA:Q9YM94" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q9YM94" FT /protein_id="BAA76013.1" FT /translation="LEKEGKISKIGPENPYNTPVFAIKKKNSTKWRNLV" XX SQ Sequence 105 BP; 49 A; 15 C; 19 G; 22 T; 0 other; ctggaaaagg aaggaaaaat ttcaaaaatt gggcctgaaa atccatacaa tactccagta 60 tttgccataa agaaaaagaa cagtactaaa tggagaaact tagta 105 // ID AB001193; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001193; XX DT 15-MAR-1999 (Rel. 59, Created) DT 27-JAN-2009 (Rel. 99, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds, clone: SP-08. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 488cba4b5202b4b82652bf7d297fe370. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human spleen" FT /clone="SP-08" FT /proviral FT /note="isolated from spleen proviruses" FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 41-75" FT /db_xref="GOA:Q787Z9" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q787Z9" FT /protein_id="BAA76014.1" FT /translation="LEKEGKISKIGPENPYNTPVFAIKKKNSTRWRKLV" XX SQ Sequence 105 BP; 49 A; 14 C; 20 G; 22 T; 0 other; ctggaaaagg aaggaaaaat ttcaaaaatt gggcctgaaa atccatacaa tactccagta 60 tttgccataa agaaaaagaa cagtactaga tggagaaaat tagta 105 // ID AB001194; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001194; XX DT 15-MAR-1999 (Rel. 59, Created) DT 27-JAN-2009 (Rel. 99, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds, clone: SP-09. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 488cba4b5202b4b82652bf7d297fe370. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human spleen" FT /clone="SP-09" FT /proviral FT /note="isolated from spleen proviruses" FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 41-75" FT /db_xref="GOA:Q787Z8" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q787Z8" FT /protein_id="BAA76015.1" FT /translation="LEKEGKISKIGPENPYNTPVFAIKKKNSTRWRKLV" XX SQ Sequence 105 BP; 49 A; 14 C; 20 G; 22 T; 0 other; ctggaaaagg aaggaaaaat ttcaaaaatt gggcctgaaa atccatacaa tactccagta 60 tttgccataa agaaaaagaa cagtactaga tggagaaaat tagta 105 // ID AB001195; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001195; XX DT 15-MAR-1999 (Rel. 59, Created) DT 27-JAN-2009 (Rel. 99, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds, clone: SP-10. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 488cba4b5202b4b82652bf7d297fe370. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human spleen" FT /clone="SP-10" FT /proviral FT /note="isolated from spleen proviruses" FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 41-75" FT /db_xref="GOA:Q787Z7" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q787Z7" FT /protein_id="BAA76016.1" FT /translation="LEKEGKISKIGPENPYNTPVFAIKKKNSTRWRKLV" XX SQ Sequence 105 BP; 49 A; 14 C; 20 G; 22 T; 0 other; ctggaaaagg aaggaaaaat ttcaaaaatt gggcctgaaa atccatacaa tactccagta 60 tttgccataa agaaaaagaa cagtactaga tggagaaaat tagta 105 // ID AB001196; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001196; XX DT 15-MAR-1999 (Rel. 59, Created) DT 27-JAN-2009 (Rel. 99, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds, clone: SP-11. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-105 RA Gatanaga H.; RT ; RL Submitted (20-FEB-1997) to the INSDC. RL Contact:Hiroyuki Gatanaga International Medical Center of Japan, AIDS RL Clinical Center; Toyama, 1-21-1, Shinjuku-ku, Tokyo 162-8655, Japan XX RN [2] RX DOI; 10.1007/s007050050483. RX PUBMED; 10076507. RA Gatanaga H., Oka S., Ida S., Wakabayashi T., Shioda T., Iwamoto A.; RT "Active HIV-1 redistribution and replication in the brain with HIV RT encephalitis"; RL Arch. Virol. 144(1):29-43(1999). XX DR MD5; 71a8ba36f784d6c08aad41c598194a5b. XX FH Key Location/Qualifiers FH FT source 1..105 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="subject 4" FT /mol_type="genomic DNA" FT /isolation_source="human spleen" FT /clone="SP-11" FT /proviral FT /note="isolated from spleen proviruses" FT /note="synonym: Human immunodeficiency virus type 1" FT /db_xref="taxon:11676" FT CDS <1..>105 FT /codon_start=1 FT /transl_table=1 FT /gene="pol" FT /product="reverse transcriptase" FT /note="amino acid position 41-75" FT /db_xref="GOA:Q787Z6" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q787Z6" FT /protein_id="BAA76017.1" FT /translation="LEKEGKISKIGPENPYNTPVFAIKKKNSTRWRKLV" XX SQ Sequence 105 BP; 50 A; 13 C; 20 G; 22 T; 0 other; ctggaaaagg aaggaaaaat ttcaaaaatt gggcctgaaa atccatacaa tactccagta 60 tttgcaataa agaaaaagaa cagtactaga tggagaaaat tagta 105 // ID AB001197; SV 1; linear; genomic DNA; STD; VRL; 105 BP. XX AC AB001197; XX DT 15-MAR-1999 (Rel. 59, Created) DT 27-JAN-2009 (Rel. 99, Last updated, Version 4) XX DE Human immunodeficiency virus 1 pol gene for reverse transcriptase, partial DE cds, c