ID MH899487; SV 1; linear; genomic RNA; STD; VRL; 303 BP. XX AC MH899487; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR41SC polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 5c176737e93a6bc36ecbdb2ffa9f85e6. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..303 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR41SC" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>303 FT /codon_start=1 FT /product="polyprotein" FT /EC_number="2.7.7.48" FT /note="RNA-dependent RNA polymerase" FT /protein_id="QCF46893.1" FT /translation="EVYQCCDLEPEAREVISALTERLYVGGPMYNSKGDLCGTRRCRAS FT GVFTTSFGNTLTCYLKATAATRAAGLKNCTMLVCGDDLVVIAESGGVEEDNRALGA" XX SQ Sequence 303 BP; 63 A; 82 C; 99 G; 59 T; 0 other; gaggtctatc agtgttgtga cctagagccc gaggcccgcg aggtcatatc cgccctcaca 60 gagcgactct atgtgggcgg tcccatgtac aacagcaagg gggacctatg cgggactcga 120 aggtgtcgcg caagcggcgt gtttaccacc agttttggga acacactgac gtgctatctc 180 aaggccactg cagccactag ggctgcaggc ctgaagaact gcacgatgct ggtctgcggt 240 gacgacttgg tcgttatcgc tgaaagcggt ggcgtggagg aggacaaccg tgctctcgga 300 gcc 303 // ID MH899488; SV 1; linear; genomic RNA; STD; VRL; 303 BP. XX AC MH899488; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR42DH polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 043c6cb3f1a2350e0a24d625b5caec4d. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..303 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR42DH" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>303 FT /codon_start=1 FT /product="polyprotein" FT /EC_number="2.7.7.48" FT /note="RNA-dependent RNA polymerase" FT /protein_id="QCF46894.1" FT /translation="EVYQCCDLEPEARKVISALTERLYVGGPMYNSRGDLCGIRRCRAS FT GVFTTSFGNTLTCYLKATAATRAAGLKNCTMLVCGDDLVVIAESDGVEEDKRALGA" XX SQ Sequence 303 BP; 69 A; 78 C; 94 G; 62 T; 0 other; gaggtctatc agtgttgtga cctagaaccc gaggcccgca aagtcatatc cgccctcaca 60 gagagactct atgtgggcgg ccctatgtac aacagcaggg gagacttgtg cggaattcga 120 aggtgtcgcg caagcggcgt atttaccacc agctttggga acacactgac gtgctatctt 180 aaggccaccg cagccactag ggctgcaggc ctgaagaact gcactatgct ggtctgtggt 240 gacgacttgg tcgttatcgc tgaaagcgat ggcgtggagg aggacaagcg tgctctcgga 300 gcc 303 // ID MH899489; SV 1; linear; genomic RNA; STD; VRL; 303 BP. XX AC MH899489; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR43NG polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 53d01428c0e6798f9d80feaaa8f24bfa. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..303 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR43NG" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>303 FT /codon_start=1 FT /product="polyprotein" FT /EC_number="2.7.7.48" FT /note="RNA-dependent RNA polymerase" FT /protein_id="QCF46895.1" FT /translation="EVYQCCDLEPEARKVISALTERLYVGGPMYNSKGDLCGIRRCRAS FT GVFTTSFGNTLTCYLKATAATRAAGLKNCTMLVCGDDLVVIAESGGVEEDKRALGA" XX SQ Sequence 303 BP; 67 A; 78 C; 96 G; 62 T; 0 other; gaggtctatc agtgttgtga cctagagccc gaggcccgca aagtcatatc cgccctcaca 60 gagagactct atgtgggcgg ccccatgtac aacagcaagg gagacttgtg cggaattcga 120 aggtgtcgcg caagcggcgt atttaccacc agctttggga acacactgac gtgctatctt 180 aaggctactg cagccactag ggctgcaggc ctgaagaact gcactatgct ggtctgtggt 240 gacgacctgg tcgttatcgc tgagagcggt ggcgtggagg aggacaagcg tgctctcgga 300 gcc 303 // ID MH899490; SV 1; linear; genomic RNA; STD; VRL; 303 BP. XX AC MH899490; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR44MA polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; fcb28f6ff5f0c076e22320d853b42025. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..303 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR44MA" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>303 FT /codon_start=1 FT /product="polyprotein" FT /EC_number="2.7.7.48" FT /note="RNA-dependent RNA polymerase" FT /protein_id="QCF46896.1" FT /translation="EVYQCCDLEPEARKVISALTERLYVGGPMYNSRGDLCGTRRCRAS FT GVFTTSFGNTLTCYLKATAATRAAGLKNCTMLVCGDDLVVIAESDGVEEDKRALGA" XX SQ Sequence 303 BP; 70 A; 80 C; 94 G; 59 T; 0 other; gaggtctatc agtgttgtga cctagagccc gaggcccgca aggtcatatc cgccctcaca 60 gagagactct atgtgggcgg ccccatgtac aacagcaggg gagacttatg cggaactcga 120 aggtgtcgcg caagcggcgt atttaccacc agctttggga acacactgac gtgctatctt 180 aaggccaccg cagccaccag ggctgcaggc ctaaagaact gcactatgtt ggtctgtggt 240 gacgacttgg tcgttatcgc tgaaagcgat ggcgtggagg aggacaagcg tgcactcgga 300 gcc 303 // ID MH899491; SV 1; linear; genomic RNA; STD; VRL; 303 BP. XX AC MH899491; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR45OLS polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; d463450b1a38bb90a0a186e7622e91d9. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..303 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR45OLS" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>303 FT /codon_start=1 FT /product="polyprotein" FT /EC_number="2.7.7.48" FT /note="RNA-dependent RNA polymerase" FT /protein_id="QCF46897.1" FT /translation="EVYQCCDLEPEARKVISALTERLYVGGPMYNSKGDLCGIRRCRAS FT GVFTTSFGNTLTCYLKATAATRAAGLKSCTMLVCGDDLVVIAESGGVEEDKRALGA" XX SQ Sequence 303 BP; 68 A; 80 C; 95 G; 60 T; 0 other; gaggtctatc agtgttgtga cctagagccc gaagcccgca aggtcatatc cgccctcaca 60 gagagactct atgtgggcgg ccccatgtac aacagcaagg gggacttatg cggaattcga 120 aggtgtcgcg caagcggcgt atttaccacc agctttggga acacactgac gtgctatctt 180 aaggccaccg cagccaccag ggctgcaggc ctaaagagct gcactatgct ggtctgtggt 240 gacgacttgg tcgttatcgc tgaaagcggt ggcgtggagg aggacaagcg tgctctcgga 300 gcc 303 // ID MH899492; SV 1; linear; genomic RNA; STD; VRL; 303 BP. XX AC MH899492; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR46PD polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 94a0344c939bd730f35e3203bd40a7c2. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..303 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR46PD" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>303 FT /codon_start=1 FT /product="polyprotein" FT /EC_number="2.7.7.48" FT /note="RNA-dependent RNA polymerase" FT /protein_id="QCF46898.1" FT /translation="EVYQCCDLEPEARKVISALTERLYVGGPMYNSRGDLCGTRRCRAS FT GVFTTSFGNTLTCYLKATAATRAAGLKNCTMLVCGDDLVVIAESDGVEEDKRALGA" XX SQ Sequence 303 BP; 67 A; 81 C; 96 G; 59 T; 0 other; gaggtctatc agtgttgtga cctagagccc gaggcccgca aggtcatatc cgccctcaca 60 gagagactct atgtgggcgg ccccatgtac aacagcaggg gagacttatg cgggactcga 120 aggtgtcgcg ccagcggcgt attcaccacc agctttggga acacactgac gtgctatctt 180 aaggccacag cggccaccag ggctgcaggc ctaaagaatt gcactatgct ggtctgcggt 240 gacgacttgg tcgttatcgc tgaaagtgat ggcgtggagg aggacaagcg tgctctcgga 300 gcc 303 // ID MH899493; SV 1; linear; genomic RNA; STD; VRL; 303 BP. XX AC MH899493; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR49SA polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; b77260e634b2a76615fa3bf597d934e5. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..303 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR49SA" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>303 FT /codon_start=1 FT /product="polyprotein" FT /EC_number="2.7.7.48" FT /note="RNA-dependent RNA polymerase" FT /protein_id="QCF46899.1" FT /translation="EVYQCCDLEPEAREVISALTERLYVGGPMYNSRGDLCGIRRCRAS FT GVFTTSFGNTLTCYLKATAATRAAGLKNCTMLVCGDDLVVIAESDGVEEDKRALGA" XX SQ Sequence 303 BP; 69 A; 81 C; 93 G; 60 T; 0 other; gaggtctatc agtgttgtga cctagaaccc gaggcccgcg aggtcatatc cgccctcaca 60 gagagactct atgtgggcgg ccccatgtac aacagcaggg gagacttatg cggaattcga 120 aggtgtcgcg caagcggcgt ttttaccacc agctttggaa acacactgac gtgctatctt 180 aaggccaccg cagccaccag ggctgcaggc ctaaagaact gcactatgct ggtctgtggt 240 gacgacttgg tcgttatcgc tgaaagcgat ggcgtggagg aggacaagcg tgccctcgga 300 gcc 303 // ID MH899494; SV 1; linear; genomic RNA; STD; VRL; 303 BP. XX AC MH899494; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR51FB polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 40d6c8483e08a05f54dc58ada1678f3b. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..303 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR51FB" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>303 FT /codon_start=1 FT /product="polyprotein" FT /EC_number="2.7.7.48" FT /note="RNA-dependent RNA polymerase" FT /protein_id="QCF46900.1" FT /translation="EVYQCCDLEPEARKVISALTERLYVGGPMYNSRGDLCGIRRCRAS FT GVFTTSFGNTLTCYLKATAATRAAGLKNCTMLVCGDDLVVIAESGGVEEDNRALGA" XX SQ Sequence 303 BP; 67 A; 85 C; 94 G; 57 T; 0 other; gaggtctatc agtgctgtga cctagagccc gaagcccgca aggtcatatc cgccctcaca 60 gagagactct acgtgggcgg ccctatgtac aacagcaggg gagacttgtg cggaattcga 120 aggtgtcgcg ccagcggcgt attcaccacc agctttggga acacactgac gtgctatctt 180 aaggccaccg cagccaccag ggctgcaggc ctaaagaact gcactatgct ggtctgcggt 240 gacgacttgg tcgttatcgc tgaaagcggt ggcgtggagg aggacaaccg tgctctcgga 300 gcc 303 // ID MH899495; SV 1; linear; genomic RNA; STD; VRL; 303 BP. XX AC MH899495; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR56FT polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 39c9542713e728e74135b6fb48a89fed. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..303 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR56FT" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>303 FT /codon_start=1 FT /product="polyprotein" FT /EC_number="2.7.7.48" FT /note="RNA-dependent RNA polymerase" FT /protein_id="QCF46901.1" FT /translation="EVYQCCDLEPEARKVISALTERLYVGGPMYNSKGDLCGIRRCRAS FT GVFTTSFGNTLTCYLKATAAIRAAGLKNCTMLVCGDDLVVIAESDGVEEDKRALGA" XX SQ Sequence 303 BP; 69 A; 81 C; 93 G; 60 T; 0 other; gaggtctatc agtgctgtga cctagagccc gaagcccgca aggtcatatc cgccctcaca 60 gagagactct atgtgggcgg ccccatgtat aacagcaagg gagacttatg cggaattcga 120 aggtgtcgcg caagcggcgt tttcaccacc agctttggga acacactgac gtgctatctt 180 aaggccaccg cagccattag ggccgcaggc ctaaagaact gcactatgct ggtctgtggt 240 gacgacttgg tcgttatcgc cgagagcgat ggcgtggagg aggacaagcg tgctctcgga 300 gcc 303 // ID MH899496; SV 1; linear; genomic RNA; STD; VRL; 303 BP. XX AC MH899496; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR54SD polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 66238efcd9c5ede7cdf3966d2bd0a88b. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..303 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR54SD" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>303 FT /codon_start=1 FT /product="polyprotein" FT /EC_number="2.7.7.48" FT /note="RNA-dependent RNA polymerase" FT /protein_id="QCF46902.1" FT /translation="EVYQCCDLEPEARKVISALTERLYVGGPMYNSKGDLCGIRRCRAS FT GVFTTSFGNTLTCYLKATAATRAAGLKNCTMLVCGDDLVVIAESDGVEEDKRALGA" XX SQ Sequence 303 BP; 71 A; 81 C; 92 G; 59 T; 0 other; gaggtctatc agtgttgtga cctagagccc gaggcccgca aggtcatatc cgccctcaca 60 gagagactct atgtgggcgg ccccatgtac aacagcaagg gagacctatg cggaattcga 120 aggtgtcgcg caagcggcgt atttaccacc agctttggga acacactgac gtgctacctt 180 aaggccaccg cagccactag ggctgcaggc ctaaagaact gcactatgct agtctgtggt 240 gacgacttgg tcgttatcgc tgaaagcgat ggcgtggagg aggacaagcg tgctctcgga 300 gcc 303 // ID MH899497; SV 1; linear; genomic RNA; STD; VRL; 303 BP. XX AC MH899497; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR55DS polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 92937b5f5264917045102db232c44a86. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..303 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR55DS" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>303 FT /codon_start=1 FT /product="polyprotein" FT /EC_number="2.7.7.48" FT /note="RNA-dependent RNA polymerase" FT /protein_id="QCF46903.1" FT /translation="EVYQCCDLEPEARKVISALTERLYVGGPMYNSKGDLCGTRRCRAS FT GVFTTSFGNTLTCYLKATAATRAAGLKNCTMLVCGDDLVVIAESGGVEEDKRALGA" XX SQ Sequence 303 BP; 67 A; 80 C; 96 G; 60 T; 0 other; gaggtctatc agtgttgtga cctagagccc gaggcccgca aggtcatatc cgccctcacg 60 gagaggctct atgtgggcgg ccccatgtac aacagcaagg gagacttatg cggaactcga 120 aggtgtcgcg caagcggcgt attcaccacc agctttggga acacactgac gtgctatctt 180 aaggccaccg cagccactag ggctgcaggc ctaaagaact gcactatgct ggtctgtggt 240 gacgacttgg tcgttatcgc tgaaagcggt ggcgtggagg aggataagcg tgctctcgga 300 gcc 303 // ID MH899498; SV 1; linear; genomic RNA; STD; VRL; 303 BP. XX AC MH899498; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR58NT polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 22a81f33488d4d13be64bb9028e808b1. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..303 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR58NT" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>303 FT /codon_start=1 FT /product="polyprotein" FT /EC_number="2.7.7.48" FT /note="RNA-dependent RNA polymerase" FT /protein_id="QCF46904.1" FT /translation="EVYQCCDLEPEARKVISALTERLYVGGPMYNSKGDLCGIRRCRAS FT GVFTTSFGNTLTCYLKATAATRAAGLKNCTMLVCGDDLVVIAESGGVEEDKRALGA" XX SQ Sequence 303 BP; 68 A; 80 C; 95 G; 60 T; 0 other; gaggtctatc agtgttgtga cctagagccc gaagcccgca aggtcatatc cgccctcaca 60 gagagactct atgtgggcgg ccccatgtac aacagcaagg gggacttgtg cggaattcga 120 aggtgtcgcg caagcggcgt atttaccacc agctttggga acacactgac gtgctatctt 180 aaggccaccg cagccaccag ggctgcgggc ctaaagaatt gcactatgct ggtctgcggt 240 gacgacttgg tcgttatcgc tgaaagcggt ggcgtggagg aggacaaacg tgctctcgga 300 gcc 303 // ID MH899499; SV 1; linear; genomic RNA; STD; VRL; 303 BP. XX AC MH899499; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR59ZK polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 97ec07f3c20bca7cc15d250b237902ce. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..303 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR59ZK" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>303 FT /codon_start=1 FT /product="polyprotein" FT /EC_number="2.7.7.48" FT /note="RNA-dependent RNA polymerase" FT /protein_id="QCF46905.1" FT /translation="EVYQCCDLEPEARKVISALTERLYVGGPMYNSKGDLCGTRRCRAS FT GVFPTSFGNTLTCYLKATAASRAAGLKNCTMLVCGDDLVVIAESGGVEEDKRALGA" XX SQ Sequence 303 BP; 66 A; 82 C; 94 G; 61 T; 0 other; gaggtctatc agtgttgtga cctagagccc gaggcccgca aggtcatatc cgccctcaca 60 gagagactct atgtgggcgg ccccatgtac aacagcaagg gagacttatg cggaactcga 120 aggtgccgcg caagcggcgt ttttcccacc agctttggga acacactgac gtgctatctt 180 aaggccaccg cagcctctag ggctgcaggc ctaaagaact gcactatgct ggtctgtggt 240 gacgacttgg tcgttatcgc tgaaagcggt ggcgtggagg aggacaagcg tgctctcgga 300 gcc 303 // ID MH899500; SV 1; linear; genomic RNA; STD; VRL; 303 BP. XX AC MH899500; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR60ME polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 0f26d87d1a791c7a2d1e17c0dc971550. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..303 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR60ME" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>303 FT /codon_start=1 FT /product="polyprotein" FT /EC_number="2.7.7.48" FT /note="RNA-dependent RNA polymerase" FT /protein_id="QCF46906.1" FT /translation="EVYQCCDLEPEARKVISALTERLYVGGPMYNSKGDLCGTRRCRAS FT GVFTTSFGNTLTCYLKATAATRAAGLKNCTMLVCGDDLVVIAESDGVEEDKRALGA" XX SQ Sequence 303 BP; 69 A; 81 C; 94 G; 59 T; 0 other; gaggtctatc agtgttgtga cctagagccc gaggcccgca aggtcatatc cgccctcaca 60 gagagactct atgtgggcgg ccccatgtac aacagcaagg gagacttgtg cggaactcga 120 agatgtcgcg caagcggcgt atttaccacc agctttggga acacactgac gtgctatctt 180 aaggccaccg cagccactag ggctgcgggc ctaaagaact gcactatgct ggtctgtggt 240 gacgacttgg tcgttatcgc tgaaagcgat ggcgtggagg aggacaagcg tgccctcgga 300 gcc 303 // ID MH899501; SV 1; linear; genomic RNA; STD; VRL; 303 BP. XX AC MH899501; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR63MB polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; e1942e9805fe6d2d797803c10a024e6c. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..303 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR63MB" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>303 FT /codon_start=1 FT /product="polyprotein" FT /EC_number="2.7.7.48" FT /note="RNA-dependent RNA polymerase" FT /protein_id="QCF46907.1" FT /translation="EVYQCCDLEPEARKVISALTERLYVGGPMYNSKGDLCGTRRCRAS FT GVLTTSFGNTLTCYLKATAATRAAGLKDCTMLVCGDDLVVIAESGGVEEDKRALGA" XX SQ Sequence 303 BP; 66 A; 84 C; 98 G; 55 T; 0 other; gaggtctatc agtgttgtga cctagagccc gaggcccgca aggtcatatc cgccctcaca 60 gagagactct atgtgggcgg ccccatgtac aacagcaagg gggacttgtg cggaacccga 120 aggtgccgcg caagcggcgt actcaccacc agctttggga acacactgac gtgctatctt 180 aaggccaccg cagccactag ggctgcaggc ctaaaggact gcactatgct ggtctgtggt 240 gacgacttgg tcgttatcgc ggaaagcggt ggcgtggagg aggacaagcg tgctctcgga 300 gcc 303 // ID MH899502; SV 1; linear; genomic RNA; STD; VRL; 303 BP. XX AC MH899502; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR64MC polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; f1deb6792550ba0ade5aeac82940f07f. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..303 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR64MC" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>303 FT /codon_start=1 FT /product="polyprotein" FT /EC_number="2.7.7.48" FT /note="RNA-dependent RNA polymerase" FT /protein_id="QCF46908.1" FT /translation="EVYQCCDLEPEARKVISALTERLYVGGPMYNSKGDLCGIRRCRAS FT GVFTTSFGNTLTCYLKATAATRAAGLKNCTMLVCGDDLVVIAESGGVEEDKRALGA" XX SQ Sequence 303 BP; 70 A; 79 C; 93 G; 61 T; 0 other; gaggtctatc agtgttgtga cctagagccc gaggcccgca aagtcatatc cgccctcaca 60 gagagactct atgtgggcgg ccccatgtac aacagcaagg gagacttatg cggaattcga 120 aggtgtcgcg caagcggcgt atttaccacc agctttggga acacactgac gtgctatctt 180 aaggccaccg cagccactag ggctgcaggc ctaaagaact gcactatgct ggtctgtggt 240 gacgacttgg tcgttatcgc tgaaagcggt ggcgtggagg aggacaagcg tgctctcgga 300 gcc 303 // ID MH899503; SV 1; linear; genomic RNA; STD; VRL; 303 BP. XX AC MH899503; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR65KK polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; a89f305b3009af8924c409a684d636c1. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..303 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR65KK" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>303 FT /codon_start=1 FT /product="polyprotein" FT /EC_number="2.7.7.48" FT /note="RNA-dependent RNA polymerase" FT /protein_id="QCF46909.1" FT /translation="EVYQCCDLEPEARKVISALTERLYVGGPMYNSKGDLCGIRRCRAS FT GVFTTSFGNTLTCYLKATAATRAAGLKNCTMLVCGDDLVVIAESGGVEEDKRALGA" XX SQ Sequence 303 BP; 70 A; 79 C; 93 G; 61 T; 0 other; gaggtctatc agtgctgtga cctagagccc gaggcccgca aagtcatatc cgccctcaca 60 gagagactct atgtgggcgg ccccatgtac aacagcaagg gagacttatg cgggattcga 120 aggtgtcgcg caagcggcgt atttaccacc agctttggaa acacactgac gtgctatctt 180 aaggccaccg cagccactag ggctgcaggc ctaaagaact gcactatgct ggtctgtggt 240 gacgacttgg tcgttatcgc tgaaagcggt ggcgtggagg aggataagcg tgctctcgga 300 gcc 303 // ID MH899504; SV 1; linear; genomic RNA; STD; VRL; 303 BP. XX AC MH899504; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR66HB polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 74a223a203f0a3c46f8237ea360cb609. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..303 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR66HB" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>303 FT /codon_start=1 FT /product="polyprotein" FT /EC_number="2.7.7.48" FT /note="RNA-dependent RNA polymerase" FT /protein_id="QCF46910.1" FT /translation="EVYQCCDLEPEARKVISALTERLYVGGPMYNSKGDLCGIRRCRAS FT GVFTTSFGNTLTCYLKATAATRAAGLKNCTMLVCGDDLVVIAESGGVEEDKRALGA" XX SQ Sequence 303 BP; 71 A; 79 C; 92 G; 61 T; 0 other; gaggtctatc agtgttgtga cctagagccc gaagcccgca aggtcatatc cgccctcaca 60 gagagactct atgtgggcgg ccccatgtac aacagcaagg gagacttatg cggaattcga 120 agatgtcgcg caagcggcgt atttaccacc agctttggga acacactgac gtgctatctt 180 aaggccaccg cagccactag ggctgcaggc ctaaagaact gcactatgct ggtctgtggt 240 gacgacttgg tcgttatcgc tgaaagcggt ggcgtggagg aggacaagcg tgctctcgga 300 gcc 303 // ID MH899505; SV 1; linear; genomic RNA; STD; VRL; 303 BP. XX AC MH899505; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR67FD polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-303 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; b38d4b06c0aa6232b1bb24e46d96b5f8. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..303 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR67FD" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>303 FT /codon_start=1 FT /product="polyprotein" FT /EC_number="2.7.7.48" FT /note="RNA-dependent RNA polymerase" FT /protein_id="QCF46911.1" FT /translation="EVYQCCDLEPEARKVISALTERLYVGGPMYNTKGDLCGIRRCRAS FT GVFTTSFGNTLTCYLKATAATRAAGLKNCTMLVCGDDLVVIAESGGVEEDKRALGA" XX SQ Sequence 303 BP; 72 A; 79 C; 90 G; 62 T; 0 other; gaggtctatc agtgttgtga cctagagccc gaagcccgca aggtcatatc cgccctcaca 60 gagagactct atgtgggcgg ccctatgtac aacaccaagg gagacttatg cggaattcga 120 agatgccgcg caagcggcgt atttaccacc agctttggga acacactgac gtgctatctt 180 aaggccaccg cagccactag ggctgcaggc ctaaagaact gcactatgct ggtctgtggt 240 gacgacttag tcgttattgc tgaaagcggt ggcgtggagg aggacaagcg tgctctcgga 300 gcc 303 // ID MH899506; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899506; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR01NA polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 4da19e34a7db919c993ddd689888ddeb. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR01NA" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46912.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYEAEHHILHLPGC FT VPCVRYGNTSRCWVALTPTVAAPYLNAPLESMRRHVDMMVGSATLCSALYIGDLCGGVF FT LVGQLFTFRPRLHWTTQDCNCS" XX SQ Sequence 378 BP; 70 A; 123 C; 93 G; 92 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacatcacca acgactgccc gaactcgagc atagtctatg aggccgagca ccacatcttg 120 cacctcccgg ggtgcgtccc ttgcgtgagg tacgggaaca cgtctagatg ctgggtagct 180 ctcaccccca ccgtggctgc accatacctg aatgctccgc ttgagtctat gagacgtcac 240 gtggatatga tggtaggcag cgccaccctt tgctccgctc tttacatcgg agatctgtgt 300 gggggtgtgt tcttggtcgg ccaattattt accttccgac ctcgcctcca ttggactact 360 caagactgca actgctcc 378 // ID MH899507; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899507; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR02GT polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; d6f08baf65e3aa1affce0a4aed383e1f. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR02GT" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46913.1" FT /translation="LSCLTVPASAYNYRNGSGVYHITNDCPNSSIVYETEYHILHLPGC FT VPCVREGNKSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 71 A; 126 C; 93 G; 88 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacggctc gggcgtctac 60 cacatcacca acgactgccc gaactcgagc atagtctatg agaccgaata ccacatcttg 120 cacctcccgg ggtgcgtccc ctgtgtgagg gaagggaaca agtctacatg ctgggtggct 180 ctcaccccca ccgtggctgc accatacctg aatgctccgc ttgagtcttt gagacgtcac 240 gtggacctga tggtaggtag cgccaccctt tgctctgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattc accttccaac ctcgccgcca ctggaccact 360 caagactgca actgctcc 378 // ID MH899508; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899508; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR03SK polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 3207e43f04aea1aa14b70661466877a3. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR03SK" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46914.1" FT /translation="LSCLTVPASAYNYRNSSGVYHVTNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 69 A; 129 C; 92 G; 88 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacgtcacca acgactgccc gaactcgagc atagtctatg aggccgatca ccacatctta 120 cacctcccgg ggtgcgtccc ctgcgtgagg gtcgggaaca cgtctacatg ctgggtagct 180 ctaaccccca ctgtggccgc accatacctg aatgctccgc ttgagtcttt gagacgtcac 240 gtggacctga tggtaggcag cgccactctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattc accttccaac ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MH899509; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899509; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR04TD polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 2e1f7d9bf3c517dbcae0ecfb6a29b456. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR04TD" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46915.1" FT /translation="LSCLTVPASAYNYRNSSGVYHVTNDCPNSSIVYEAEHHILHLPGC FT VPCVRAGNRSTCWVALTPTVAAPYLNAPLDSLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 69 A; 129 C; 94 G; 86 T; 0 other; ctctcgtgcc tgaccgttcc cgcatcggcc tacaactatc gcaacagctc gggcgtctac 60 cacgtcacca acgactgccc gaactcgagc atagtctatg aggccgaaca ccacatcttg 120 cacctcccgg ggtgcgtccc ctgcgtgagg gccgggaaca ggtctacatg ttgggtggct 180 ctcaccccca ccgtggcagc gccatacctg aacgctccgc ttgattcttt gagacgtcac 240 gtggatctga tggtaggcag cgccaccctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttagtcgg ccaattattt accttccaac ctcgccgcca ctggactact 360 caagactgca actgttcc 378 // ID MH899510; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899510; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR05EY polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 0c70a1dd0f2505a604ce3b4d49e62735. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR05EY" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46916.1" FT /translation="LSCLTVPASAFNYRNSSGVYHVTNDCPNSSIIYEADHHILHLPGC FT VPCVRYGNVSKCWVALTPTVAAPHLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 68 A; 127 C; 92 G; 91 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc ttcaactatc gcaacagctc gggcgtctat 60 cacgtcacca acgactgccc gaactcgagc ataatctatg aggccgatca tcacatcttg 120 cacctcccgg ggtgcgtccc ctgcgtgagg tacgggaacg tgtctaaatg ctgggtagct 180 ctcaccccca ccgtggctgc accgcacctg aatgctccgc ttgagtcttt gagacgtcac 240 gtggacctga tggtaggcag cgccaccctt tgctctgccc tttacatcgg agacctatgt 300 gggggtgtgt tcctggtcgg ccaattattt accttccaac ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MH899511; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899511; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR06SH polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 42b337a473fa898b5bf935ccf3d0d92e. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR06SH" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46917.1" FT /translation="LSCLTVPASAFNYRNGSGVYHVTNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 67 A; 128 C; 92 G; 91 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc ttcaactatc gcaacggctc gggcgtctac 60 catgtcacca acgactgccc gaactcgagc atagtctatg aggccgatca ccacatcttg 120 cacctcccag ggtgcgtccc ctgcgtgagg gtcgggaaca cgtctacatg ctgggtagct 180 ctcaccccca ctgtggctgc accatacctg aatgctccgc ttgagtcttt gagacgccac 240 gtggatctga tggtaggtag cgccaccctt tgctccgccc tttacatcgg agacctatgt 300 gggggtgtgt tcttggtcgg ccaattattc accttccaac ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MH899512; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899512; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR07AA polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 546eb8b5a3fce17953f1b592a77f33fb. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR07AA" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46918.1" FT /translation="LSCLTVPASAYNYRNSSGVYHVTNDCPNSSIVYETDHHILHLPGC FT VPCVRNGNRSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 70 A; 125 C; 92 G; 91 T; 0 other; ctctcgtgcc tgaccgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacgtcacca atgactgccc gaactcgagc atagtctatg agaccgatca ccacatcttg 120 cacctcccag ggtgtgtccc ctgtgtgagg aacgggaaca ggtctacatg ctgggtggct 180 ctcaccccca ccgtggctgc accatacctg aatgctccgc ttgagtcttt gagacgtcac 240 gtggatctga tggtaggcag cgccaccctt tgctccgccc tttacatcgg agatctgtgt 300 gggggtgtgt tcttggtcgg ccaattattt accttccaac ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MH899513; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899513; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR08SC polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 95d9babb32466f8d036a43dfb255842d. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR08SC" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46919.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYEADYHILHLPGC FT VPCVRVGNTSRCWVALTPTVAAPFLNAPLVSLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 65 A; 127 C; 94 G; 92 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacatcacca acgactgccc gaactcgagc atagtctatg aggccgatta ccacatcttg 120 caccttccgg ggtgcgtccc ctgcgtgagg gtcgggaaca cgtctagatg ctgggtagct 180 ctcaccccca ctgtggctgc gccattcctg aatgctccgc ttgtgtcctt gagacgtcac 240 gtggatctga tggtaggcag cgccaccctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattc accttccaac ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MH899514; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899514; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR09HMD polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; ffbb51ddd9fa4da2e5553bd7e3791a6f. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR09HMD" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46920.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGGATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 67 A; 129 C; 94 G; 88 T; 0 other; ctctcgtgcc tgactgttcc cgcctcggcc tacaactatc gcaacagctc gggcgtctac 60 cacatcacca acgactgccc gaactcgagc atagtctatg aggccgatca ccatatctta 120 caccttccgg ggtgcgtccc ctgcgtgagg gtcgggaaca cgtctacatg ttgggtggct 180 ctcaccccca ccgtggcggc accatacctg aatgctccgc ttgagtctct gagacgtcac 240 gtggacctga tggtaggcgg cgccactctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattt accttccaac ctcgccgcca ctggaccact 360 caagactgca actgctcc 378 // ID MH899515; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899515; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR10AK polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; caaf3568ecd9752ca6af974046c95f5c. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR10AK" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46921.1" FT /translation="LSCLTVPASAYNYRNSSGVYHVTNDCPNSSIIYEADHHILHLPGC FT VPCVRVGNASTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 66 A; 122 C; 94 G; 96 T; 0 other; ctctcgtgcc tgactgttcc tgcttcggcc tacaattatc gcaacagctc gggcgtctat 60 catgtcacca atgactgccc gaactcgagc ataatctatg aggccgatca ccacatcttg 120 cacctcccgg ggtgcgtccc ctgcgtgagg gtcgggaacg cgtctacatg ctgggtggct 180 ctcaccccca ccgtggctgc accatacctg aatgctccgc ttgagtcttt gagacgccac 240 gtggatctga tggtaggtag cgccaccctt tgctccgccc tttacatcgg agacttgtgt 300 gggggtgtgt tcttggtcgg ccaattattt accttccaac ctcgccgcca ttggactact 360 caagactgca actgctcc 378 // ID MH899516; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899516; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR11RE polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 629fd73b7aa667c7e059734cd2f8e470. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR11RE" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46922.1" FT /translation="LSCLTVPASAYNYRNSSGVYHVTNDCPNSSIVYEADHHILHLPGC FT VPCVRNGNTSTCWVALTPTVAAPYLGAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 65 A; 128 C; 96 G; 89 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacgtcacca acgactgccc gaactcgagc atagtttatg aggccgacca ccacatcctg 120 cacctcccgg ggtgcgtccc ctgcgtgagg aacgggaaca cgtctacatg ttgggtagct 180 ctcaccccta ccgtggctgc gccatacctg ggtgctccgc ttgagtcttt gagacgtcac 240 gtggacctga tggtaggcag cgccaccctt tgctccgccc tttacatcgg agacttgtgt 300 gggggtgtgt tcttggtcgg ccaactgttt accttccaac ctcgccgcca ctggactact 360 caagactgca attgctcc 378 // ID MH899517; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899517; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR12BT polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 501fb1598bc64b90d44304365962d19c. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR12BT" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46923.1" FT /translation="LSCLTVPASAYNYRNSSGVYHVTNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNKSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGGATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 64 A; 126 C; 97 G; 91 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tataactatc gcaacagctc gggcgtctac 60 cacgtcacca acgactgccc gaactcgagc atagtctatg aggccgatca ccacatcttg 120 cacctcccgg ggtgcgtccc ctgtgtgagg gtcgggaaca agtctacatg ctgggtggct 180 ctcaccccca ccgtggccgc gccatacctg aatgctccgc ttgagtcttt gagacgtcac 240 gtggatctga tggtaggtgg cgccaccctt tgctccgctc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattgttt accttccaac ctcgccgcca ctggaccact 360 caagactgca actgctcc 378 // ID MH899518; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899518; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR13AG polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; a3c6c22adcb42b16b09a3e09bd082104. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR13AG" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46924.1" FT /translation="LSCLTVPASAYNYRNSSGVYHVTNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNTSKCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQECNCS" XX SQ Sequence 378 BP; 69 A; 127 C; 93 G; 89 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctat 60 catgtcacca acgactgccc gaactcaagc atagtctatg aggctgatca ccacatcttg 120 cacctcccgg ggtgcgtccc ctgcgtgagg gtcgggaaca cgtccaaatg ctgggtggct 180 ctcaccccca ccgtggctgc gccatacctg aatgctccgc ttgagtcttt aagacgccac 240 gtggacctga tggtaggcag cgccaccctc tgctccgccc tttacatcgg agacttatgt 300 gggggtgtgt tcttggtcgg ccaattattt accttccaac ctcgccgcca ctggaccact 360 caggaatgca actgttcc 378 // ID MH899519; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899519; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR14FK polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 03417b3cf09d92919dcb3b810166ee30. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR14FK" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46925.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNMSKCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGMF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 70 A; 125 C; 91 G; 92 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacatcacta acgactgccc gaactcgagc atagtctatg aggccgatca ccacatctta 120 cacctcccgg ggtgcgtccc ctgcgtgagg gtcgggaaca tgtctaaatg ctgggtggct 180 ctcaccccca ccgtggctgc accatacctg aatgctccgc ttgagtcttt gagacgtcac 240 gtggatctga tggtaggcag cgccaccctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtatgt tcttggtcgg ccaattattt accttccaac ctcgccgcca ctggactact 360 caagactgca actgctct 378 // ID MH899520; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899520; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR15KY polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 1fbcfaa2e3d312bb774c3f01149ddc4d. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR15KY" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46926.1" FT /translation="LSCLTVPASAYNYRNSSGVYHVTNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNTSKCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQECNCS" XX SQ Sequence 378 BP; 68 A; 129 C; 94 G; 87 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctat 60 catgtcacca acgactgccc gaactcaagc atagtctatg aggctgatca ccacatcttg 120 cacctcccgg ggtgcgtccc ctgcgtgagg gtcgggaaca cgtccaaatg ctgggtggct 180 ctcaccccca ccgtggctgc gccatacctg aatgctccgc ttgagtcttt aagacgccac 240 gtggacctga tggtaggcag cgccaccctc tgctccgccc tttacatcgg agacctatgt 300 gggggtgtgt tcttggtcgg ccaattgttc accttccaac ctcgccgcca ctggaccact 360 caggaatgca actgttcc 378 // ID MH899521; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899521; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR16MO polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 9ba8e6aee1931d6d01947903ebd431af. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR16MO" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46927.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGTATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 65 A; 125 C; 94 G; 94 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacatcacca acgactgccc gaactcgagc atagtctatg aggctgatca tcacatcttg 120 cacctcccgg ggtgcgtccc ctgcgtgagg gtcgggaaca cgtctacgtg ctgggtggct 180 ctcaccccca ctgtggctgc accatacctg aatgctccgc ttgagtcttt gagacgtcat 240 gtggatctga tggtaggcac tgccaccctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccagttattt accttccaac ctcgccgcca ctggaccact 360 caagactgta actgctcc 378 // ID MH899522; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899522; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR17EA polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 44feee1cb3414fadb50445ece97d8ab6. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR17EA" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46928.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYETEHHILHLPGC FT VPCVRVGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 71 A; 124 C; 91 G; 92 T; 0 other; ctctcgtgcc tgactgttcc tgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacatcacca acgactgccc gaactcaagc atagtctatg agaccgagca ccacatcttg 120 cacctcccag ggtgcgtccc ctgcgtgagg gttgggaaca cgtctacatg ctgggtggct 180 cttaccccca ccgtggctgc accatatctg aatgctccgc ttgagtcctt gagacgtcac 240 gtggatctga tggtaggcag cgccactctt tgctctgctc tctacatcgg agacctatgt 300 gggggtgtgt tcttggtcgg ccaattattt accttccaac ctcgccggca ctggactacc 360 caagactgca actgctcc 378 // ID MH899523; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899523; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR18FO polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; bcdf93f350e30ce411e1ce6fafd2f6e0. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR18FO" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46929.1" FT /translation="LSCLTVPASAYNYRNSSGVYHVTNDCPNSSIVYETDHHILHLPGC FT VPCVRSGNTSTCWVALTPTVAAPRLDAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 67 A; 129 C; 94 G; 88 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacgtcacca acgactgccc gaactcgagc atagtttatg agaccgatca ccacatcttg 120 cacctcccgg ggtgcgtccc ctgcgtgagg agcgggaaca cgtctacatg ctgggtggct 180 ctcaccccca ccgtggctgc accacgcctg gatgctccgc ttgagtcttt gagacgtcac 240 gtggatctga tggtaggtag cgccaccctc tgctccgccc tttacatcgg agacctatgt 300 gggggtgtgt tcttggtcgg ccaattattc actttccaac ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MH899524; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899524; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR19SAA polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 161afbc22b38703b3e873f3c44001311. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR19SAA" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46930.1" FT /translation="LSCLTVPASAYNYRNSSGVYHVTNDCPNSSIVYEADHHILHLPGC FT VPCVRTGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 72 A; 128 C; 89 G; 89 T; 0 other; ctctcgtgcc tgactgttcc cgcttcagcc tacaactatc gcaacagctc gggcgtctac 60 cacgtcacca acgactgccc gaactcgagc atagtctatg aggccgatca ccacatcttg 120 cacctcccag gatgcgtccc ctgtgtgagg accgggaaca cgtctacatg ttgggtagct 180 ctcaccccca ccgtggctgc accatacctg aatgcaccgc ttgagtcttt gagacgtcac 240 gtggatctga tggtaggcag cgccaccctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattt accttccaac ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MH899525; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899525; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR20SK polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 2e710c16009be45e75b02afbb2597fb3. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR20SK" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46931.1" FT /translation="LSCLTVPASAYNYRNSSGVYHVTNDCPNSSIIYEADHHILHLPGC FT VPCVRVGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFRPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 68 A; 128 C; 92 G; 90 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacgtcacca acgactgccc aaactcgagc ataatctatg aggccgatca ccacatcttg 120 cacctcccgg ggtgcgtccc ctgcgtgagg gtcgggaaca cgtccacatg ctgggtggct 180 ctcactccca ccgtggctgc accatacctg aatgctccac ttgagtcttt gagacgtcac 240 gtggatttga tggtaggtag cgccaccctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattc actttccgac ctcgccgcca ctggactacc 360 caagactgca actgctcc 378 // ID MH899526; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899526; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR21AK polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; dbf70f8b1e79f0186d21153bfbceb420. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR21AK" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46932.1" FT /translation="LSCLTVPASAYNYRNSSGVYHVTNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDSNCS" XX SQ Sequence 378 BP; 69 A; 123 C; 92 G; 94 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggtgtctac 60 cacgtcacca acgactgccc gaactcgagc atagtttatg aagccgatca ccacatcttg 120 caccttccgg ggtgcgtccc ctgcgtgagg gtcgggaaca cgtctacatg ctgggtagct 180 ctcactccca ccgtggctgc accatacctg aatgctccgc ttgagtcttt gagacgtcac 240 gtggatctga tggtaggcag cgccaccctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg tcaattattt accttccaac ctcgccgcca ctggactact 360 caagatagca actgctcc 378 // ID MH899527; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899527; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR22YD polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; afa48ea76404bc192ec95f53dead5c2f. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR22YD" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46933.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYEADHHILHLPGC FT VPCVRSGNTSTCWVALTPTVAAPYLNAPLDSLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 68 A; 134 C; 89 G; 87 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacatcacca acgactgccc taactcgagc atagtctatg aggccgacca ccacatctta 120 cacctcccgg ggtgcgtccc ctgcgtgagg tccgggaaca cgtctacatg ctgggtggct 180 ctcaccccca ccgtggctgc accatacctg aacgctccgc ttgactcttt gagacgtcac 240 gtggatttga tggtaggcag cgccaccctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattc accttccaac ctcgccgcca ctggaccact 360 caagactgca actgctcc 378 // ID MH899528; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899528; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR23GK polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 3d2bee3ba1061e8ff51b84b2d082a903. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR23GK" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46934.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 69 A; 126 C; 92 G; 91 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctat 60 cacatcacca acgactgccc gaactcaagc atagtctatg aggctgatca ccacatcttg 120 cacctcccgg ggtgcgtccc ttgcgtaagg gtcgggaaca cgtctacatg ctgggtagct 180 ctcaccccca cagtggctgc gccgtacctg aatgctccgc ttgagtcttt gagacgtcac 240 gtggatctga tggtaggcag cgccaccctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattc accttccaac ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MH899529; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899529; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR24FA polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 50c82153d2927b87c2a76e9922161092. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR24FA" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46935.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 69 A; 128 C; 91 G; 90 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacatcacca acgactgccc gaactcgagc atagtctatg aggccgatca ccacatcttg 120 cacctcccgg ggtgcgtccc ctgcgtaagg gtcgggaaca cgtctacatg ctgggtagct 180 ctcaccccta ccgtggctgc accatacctg aatgctccgc ttgagtcttt aaggcgtcac 240 gtggacctga tggtaggcag cgccaccctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggttgg ccaattattc actttccaac ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MH899530; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899530; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR25SK polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; b2b9a8df8f9416e61ae527eda7a58f34. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR25SK" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46936.1" FT /translation="LSCLTVPASAYNYRNSSGVYHVTNDCPNSSIVYEAEHHILHLPGC FT VPCVRVGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 66 A; 131 C; 96 G; 85 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacgtcacca atgactgccc gaactcgagc atagtctatg aggccgagca ccacatcttg 120 catctcccgg ggtgcgtccc ctgcgtgagg gtcgggaaca cgtctacatg ctgggtggct 180 ctcaccccca ccgtggctgc gccatacctg aatgctccgc ttgagtcctt gagacgccac 240 gtggatctga tggtaggcag cgccaccctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattc accttccaac cacgccgcca ctggactacc 360 caagactgca actgctcc 378 // ID MH899531; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899531; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR26FG polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 9c75529abd96a2c256d45476c8c04b64. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR26FG" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46937.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 69 A; 127 C; 92 G; 90 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctat 60 cacatcacca acgactgccc gaactcaagc atagtctatg aggctgatca ccacatcttg 120 cacctcccgg ggtgcgtccc ctgcgtgagg gtcgggaaca cgtctacatg ctgggtagct 180 ctcaccccca cagtggctgc gccatacctg aatgctccgc ttgagtcttt gagacgtcac 240 gtggatctga tggtaggcag cgccaccctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattc accttccaac ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MH899532; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899532; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR27AG polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 248d83db9bb365653420e9c9793cf114. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR27AG" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46938.1" FT /translation="LSCLTVPASAYNYRNSSGVYHVTNDCPNSSIIYEADHHILHLPGC FT VPCVRVGNTSRCWVALTPTVAAPHLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 70 A; 129 C; 91 G; 88 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacgtcacca acgactgccc aaactcgagc ataatctatg aggccgatca ccacatctta 120 cacctcccgg ggtgcgtccc ctgtgtgagg gtcgggaaca cgtctagatg ctgggtagct 180 ctcaccccca ccgtggctgc accacacctg aatgctccgc ttgagtcttt gagacgtcac 240 gtggacctga tggtaggtag cgccaccctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattc accttccaac ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MH899533; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899533; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR29ZD polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 647163b37491a7f7e3e272925f3cd3d6. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR29ZD" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46939.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYEADNHILHLPGC FT VPCVRVGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 67 A; 128 C; 94 G; 89 T; 0 other; ctctcgtgcc tgactgttcc cgcctcggcc tacaactatc gcaacagctc gggcgtctac 60 cacatcacca acgactgccc gaactcgagc atagtctatg aggccgataa tcacatcttg 120 cacctcccgg ggtgcgtccc ctgcgtgagg gtcgggaaca cgtctacatg ttgggtggct 180 ctcaccccca ccgtggctgc gccatacctg aatgctccgc ttgagtcctt gagacgtcac 240 gtggatctga tggtaggcag cgccactctt tgctccgccc tctacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattt accttccaac ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MH899534; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899534; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR30SA polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 6dd99b221371c190c464c9ab304f1532. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR30SA" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46940.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNTSKCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 68 A; 130 C; 93 G; 87 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacatcacta acgactgccc gaactcgagc atagtctatg aggccgatca ccacatcttg 120 cacctcccgg ggtgcgtccc ctgcgtgagg gtcgggaaca cgtctaaatg ctgggtggct 180 ctcaccccca ccgtggccgc accatacctg aatgctccgc ttgagtcttt gagacgccac 240 gtggatctga tggtaggcag cgccactctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattc accttccaac ctcgccgcca ctggaccact 360 caagactgca actgctcc 378 // ID MH899535; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899535; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR31MO polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; e21e8154868d892494840c18bfa66240. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR31MO" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46941.1" FT /translation="LSCLTVPASAYNYRNSSGIYHITNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 67 A; 125 C; 93 G; 93 T; 0 other; ctctcgtgct tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcatctac 60 cacatcacca acgactgccc gaactcgagc atagtctatg aggctgatca tcacatcttg 120 cacctcccgg ggtgcgtccc ctgcgtgagg gtcgggaaca cgtctacatg ctgggtggct 180 ctcaccccca ccgtggctgc gccatacctg aatgctccgc ttgagtcttt gagacgtcac 240 gtggatctga tggtaggcag cgccaccctt tgctccgccc tttacatcgg agacttgtgt 300 gggggtgtgt tcttggttgg ccaattattc accttccaac ctcgccgcca ttggaccact 360 caagactgca actgctcc 378 // ID MH899536; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899536; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR32MSG polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 9f13363e7e696425b7fc77aabd71d0bf. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR32MSG" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46942.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIIYEADHHILHLPGC FT VPCVRVGNKSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYVGDLCGGAF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 69 A; 124 C; 92 G; 93 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacatcacta acgactgccc gaactcgagc ataatctatg aggccgatca ccacatctta 120 cacctcccgg ggtgcgtccc ctgcgtgagg gtcgggaaca agtctacatg ctgggtggct 180 ctcaccccca ctgtggctgc gccatacctg aatgctccac ttgagtcttt gagacgtcac 240 gtggatttga tggtaggcag tgccaccctt tgctccgctc tttacgtcgg agacttgtgt 300 gggggtgcat tcttggtcgg ccagttattc accttccaac ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MH899537; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899537; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR33DG polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 544383c40f23b3dad8263aea07a39218. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR33DG" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46943.1" FT /translation="LSCLTVPASAYNYRNSSGVYHVTNDCPNSSIVFETEHHILHLPGC FT VPCVRTGNTSRCWMALTPTVASPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 68 A; 124 C; 92 G; 94 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggct tataactatc gcaacagctc gggcgtctac 60 cacgtcacca acgactgccc gaactcgagc atagtttttg agaccgagca ccacatcttg 120 catctcccgg ggtgcgtccc ctgcgtgagg accgggaaca cgtctagatg ctggatggct 180 ctcactccca ccgtggcttc accatacctg aatgctccgc ttgagtcttt gagacgtcat 240 gtggatctga tggtaggcag cgccaccctt tgctccgccc tttacatcgg agacttgtgc 300 gggggtgtgt tcttggtcgg ccaattattc accttccaac ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MH899538; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899538; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR34AS polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; f0e9844d7afd6567411e9983a9e83001. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR34AS" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46944.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYEADHHILHLPGC FT VPCVRTGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 69 A; 126 C; 90 G; 93 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctat 60 cacatcacca acgactgccc gaactcgagc atagtctatg aggccgatca ccacatctta 120 cacctcccgg ggtgcgtccc ctgcgtgagg actgggaaca cgtctacatg ttgggtggct 180 ctcaccccca ccgtggctgc cccatacctg aatgctccgc ttgagtcttt gagacgtcac 240 gtggatctga tggtaggcag cgccaccctt tgctctgccc tttacatcgg agacctatgt 300 gggggtgtgt tcttggtcgg ccaattattt actttccaac ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MH899539; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899539; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR35AB polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 3d2bee3ba1061e8ff51b84b2d082a903. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR35AB" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46945.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 69 A; 126 C; 92 G; 91 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctat 60 cacatcacca acgactgccc gaactcaagc atagtctatg aggctgatca ccacatcttg 120 cacctcccgg ggtgcgtccc ttgcgtaagg gtcgggaaca cgtctacatg ctgggtagct 180 ctcaccccca cagtggctgc gccgtacctg aatgctccgc ttgagtcttt gagacgtcac 240 gtggatctga tggtaggcag cgccaccctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattc accttccaac ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MH899540; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899540; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR36AK polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 93775f128ac8aae1650d26a8e26f1f49. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR36AK" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46946.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNTSRCWVALTPTVAAPHLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 70 A; 128 C; 91 G; 89 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctat 60 cacatcacca acgactgccc gaactcgagc atagtctatg aggccgatca ccacatctta 120 caccttccgg ggtgcgtccc ctgcgtgagg gtcgggaaca cgtctagatg ctgggtagct 180 ctcactccca ccgtggccgc accacacctg aatgctccgc ttgaatcttt gagacgtcac 240 gtggacctga tggtaggtag cgccaccctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattc accttccaac ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MH899541; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899541; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR37SE polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 9566f50bf2a47dd07762368f52202bb2. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR37SE" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46947.1" FT /translation="LSCLTVPASAYNYRNSSGIYHITNDCPNSSIIYEADHHILHLPGC FT VPCVRYENTSRCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 71 A; 127 C; 90 G; 90 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gtaacagctc gggcatctat 60 cacatcacta acgactgccc gaactcgagc ataatctatg aggccgatca ccacatcctg 120 cacctcccgg ggtgcgtccc ctgcgtgagg tacgagaaca cgtctagatg ctgggtggct 180 ctcaccccca ccgtggctgc accatacctg aatgctccgc ttgagtctct gagacgtcac 240 gtggacctga tggtaggcag cgccaccctt tgctctgccc tttacatcgg agacctgtgt 300 gggggcgtgt tcttggtcgg ccaattattt accttccaac ctcgccgcca ctggactact 360 caagactgta actgctcc 378 // ID MH899542; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899542; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR38KO polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; eda190775aac5fb82401cb147f9f4133. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR38KO" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46948.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYEADHHILHLPGC FT VPCVRTGNKSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 68 A; 129 C; 93 G; 88 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacatcacca acgactgccc gaactcgagc atagtctacg aggccgatca ccacatcttg 120 cacctcccgg ggtgcgtccc ctgcgtgagg accgggaaca agtctacatg ctgggtggct 180 ctcaccccca ccgtggctgc gccatacctg aatgctccac ttgagtcttt gagacgtcac 240 gtggatctga tggtaggcag cgccaccctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattt accttccagc ctcgccgcca ctggactact 360 caagactgca actgttcc 378 // ID MH899543; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899543; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR39MK polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 137a6fba229cf3eb88909b48e06afa16. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR39MK" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46949.1" FT /translation="LSCLTVPASAYNYRNSSGVYHVTNDCPNSSIVYEAEHHILHLPGC FT VPCVRTGNTSTCWVALTPTVAAPYLGAPLESLRRHVDLMVGSATICSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 68 A; 127 C; 95 G; 88 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacgtcacca acgactgccc gaactcgagc atagtttatg aggccgagca ccacatcttg 120 cacctcccgg ggtgcgtccc ctgcgtgagg accgggaaca cgtctacatg ctgggtggct 180 ctcaccccta ccgtggccgc accatacctg ggtgctccac ttgagtcttt gagacgtcac 240 gtggatctga tggtaggcag cgcaaccatt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattt accttccaac ctcgccgcca ctggaccact 360 caagactgca attgctcc 378 // ID MH899544; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899544; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR40YO polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 82d1d1c8044ebc63ad222e0b3404ecc2. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR40YO" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46950.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYETDHHILHLPGC FT VPCVRNGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 71 A; 125 C; 90 G; 92 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctat 60 cacatcacca acgactgccc gaactcgagc atagtttatg agaccgatca tcacatcttg 120 cacctcccag ggtgcgtccc ctgcgtgagg aacgggaaca cgtctacatg ctgggtagct 180 ctcaccccca ccgtggctgc accatacctg aatgctccgc ttgagtcttt gagacgtcac 240 gtggatctga tggtaggtag cgccaccctt tgctccgccc tttacatcgg agacttgtgc 300 gggggtgtgt tcttggtcgg ccaattattt accttccagc ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MH899545; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899545; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR41SC polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 1cf80446c46714fbef6fbb3e40d193e9. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR41SC" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46951.1" FT /translation="LSCLTVPASAYNYRNSSGVYYVTNDCPNSSIVYETENHILHLPGC FT VPCVKNGNKSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQECNCS" XX SQ Sequence 378 BP; 74 A; 122 C; 91 G; 91 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 tacgtcacca atgactgccc gaactcgagc atagtctatg agaccgaaaa ccacatcttg 120 caccttccgg ggtgcgtccc ctgtgtgaag aacgggaaca agtccacatg ctgggtggcc 180 ctcaccccca ctgtggctgc accatacctg aatgctccgc ttgagtctct gagacgtcac 240 gtggatttga tggtaggtag cgctactctt tgctccgccc tttacatcgg agacctgtgt 300 gggggcgtgt tcttggtcgg ccaattattt accttccaac ctcgccgcca ctggactacc 360 caagaatgca actgctcc 378 // ID MH899546; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899546; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR42DH polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 146a320f48912a6ef25f3966d2ffca5e. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR42DH" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46952.1" FT /translation="LSCLTVPASAYNYRNSSGVYHVTNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNKSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGGATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 66 A; 126 C; 95 G; 91 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacgtcacca acgactgccc gaactcgagc atagtctatg aggccgatca ccacatctta 120 cacctcccgg ggtgcgtccc ctgcgtgagg gtcgggaaca agtctacatg ctgggtggct 180 ctcaccccca ccgtggctgc accatacctg aatgctccgc ttgagtcttt gagacgtcac 240 gtggatctga tggtaggcgg cgccactctt tgctctgccc tttacatcgg ggacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattt accttccaac ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MH899547; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899547; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR43NG polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 47de9669d93716a8f2fc5adc6c6fe6cb. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR43NG" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46953.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 70 A; 128 C; 90 G; 90 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacatcacca acgactgccc gaactcaagc atagtctatg aggccgatca ccacatcttg 120 cacctcccgg gatgcgtccc ctgcgtgagg gtcgggaaca cgtctacatg ctgggtggct 180 ctcaccccca ccgtggctgc accatacctg aatgctccgc ttgagtcttt gagacgtcac 240 gtggatctga tggtaggcag cgccactctt tgctccgccc tttacatcgg agacctatgt 300 gggggtgtgt tcttggtcgg ccaattattt accttccaac ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MH899548; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899548; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR44MA polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; a8d99baeae29af28ba73796a8a6cf729. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR44MA" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46954.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIIYEADHHILHLPGC FT VPCVRVGNTSKCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 70 A; 123 C; 91 G; 94 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacatcacca acgactgccc gaactcgagc ataatctatg aggccgatca tcacatcttg 120 cacctcccgg ggtgtgtccc ctgtgtgagg gtcgggaaca cgtctaaatg ttgggtggct 180 ctcaccccca ctgtggctgc accatacctg aatgctccgc ttgagtcttt aagacgtcat 240 gtggacctga tggtaggtag cgccaccctt tgctccgccc tttacatcgg agatctgtgt 300 gggggtgtgt tcttggtcgg ccaactattt accttccaac ctcgccgcca ctggaccact 360 caagactgca actgctcc 378 // ID MH899549; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899549; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR45OLS polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; e69ebfa61675e12ff75781c8b45acf4a. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR45OLS" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46955.1" FT /translation="LSCLTVPASAYNYRNSSGVYHVTNDCPNSSIVYETDHHILHLPGC FT VPCVRVGNTSTCWVALTPTVAAPHLNAPLESLRRHVDMMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 68 A; 131 C; 93 G; 86 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggtgtctac 60 cacgtcacca acgactgccc gaactcgagc atagtctatg agaccgatca ccacatcttg 120 cacctcccgg ggtgcgtccc ctgcgtgagg gtcgggaaca cgtctacatg ctgggtggct 180 ctcaccccca ccgtggctgc accacacctg aatgctccgc ttgagtcttt gagacgtcac 240 gtggacatga tggtaggcag cgccactctc tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcctggtcgg ccaattattt accttccaac ctcgccgcca ctggaccact 360 caagactgca actgctcc 378 // ID MH899550; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899550; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR46PD polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 798ffe7a24f6f7b5e8fe85d0eccdc47a. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR46PD" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46956.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNTSTCWVALTPTVAAPYLNAPLDSLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 69 A; 131 C; 90 G; 88 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacatcacca acgactgccc gaactcgagc atagtctatg aggccgacca ccacatcttg 120 cacctcccag ggtgcgtccc ctgcgtgagg gtcgggaaca cgtctacatg ctgggtagct 180 ctcaccccca ccgtggctgc accatacctg aatgctccgc ttgattcttt gagacgtcac 240 gtggatctga tggtaggcag cgccactctc tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattc accttccaac ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MH899551; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899551; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR47SA polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; ffbb51ddd9fa4da2e5553bd7e3791a6f. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR47SA" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46957.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGGATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 67 A; 129 C; 94 G; 88 T; 0 other; ctctcgtgcc tgactgttcc cgcctcggcc tacaactatc gcaacagctc gggcgtctac 60 cacatcacca acgactgccc gaactcgagc atagtctatg aggccgatca ccatatctta 120 caccttccgg ggtgcgtccc ctgcgtgagg gtcgggaaca cgtctacatg ttgggtggct 180 ctcaccccca ccgtggcggc accatacctg aatgctccgc ttgagtctct gagacgtcac 240 gtggacctga tggtaggcgg cgccactctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattt accttccaac ctcgccgcca ctggaccact 360 caagactgca actgctcc 378 // ID MH899552; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899552; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR49SA polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; bf3d6abe2b6eaf06cfa03885c05c9dba. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR49SA" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46958.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYEAENHILHLPGC FT VPCVRVGNTSTCWVALTPTVAAPYLNAPLTSLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 66 A; 129 C; 95 G; 88 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacatcacca acgactgccc gaactcgagc atagtctatg aggccgagaa ccacatcttg 120 cacctcccgg gatgcgtccc ctgcgtgagg gtcgggaaca cgtctacatg ctgggtggct 180 ctcaccccca ccgtggctgc gccatacctg aatgctccgc ttacgtcttt gaggcgtcat 240 gtggatctga tggtaggcag cgccaccctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccagttattt accttccaac ctcgccgcca ctggaccact 360 caagactgca actgctcc 378 // ID MH899553; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899553; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR51FB polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 6e0020f41d75db4e913e6ade3c8dce53. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR51FB" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46959.1" FT /translation="LSCLTVPASAYNYRNSSGIYHVTNDCPNSSIVYETEHHILHLPGC FT VPCVRDGNTSRCWVALTPTVAAPSLDAPLESLRRHVDLMVGSATLCSAFYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 69 A; 129 C; 93 G; 87 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcatctac 60 cacgtcacca acgactgccc gaactcgagc atagtctatg agaccgaaca ccacatcttg 120 cacctcccag ggtgcgtccc ctgcgtgagg gacgggaaca cgtctagatg ctgggtggct 180 ctcaccccca ccgtggctgc accatccctg gatgctccgc ttgagtcttt gagacgtcac 240 gtggatctga tggtaggtag cgccaccctt tgctccgcct tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattc accttccaac ctcgccgcca ctggaccact 360 caagactgca actgctcc 378 // ID MH899554; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899554; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR52SY polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; b04e6fa5e2f6245ee3c1a7def87a3195. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR52SY" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46960.1" FT /translation="LSCLTVPASAYNYRNSSGVYHVTNDCPNSSIVYEADHHILHLPGC FT VPCVKVGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQECNCS" XX SQ Sequence 378 BP; 68 A; 128 C; 93 G; 89 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacgtcacca acgactgccc gaactcgagc atagtctatg aggccgatca ccacatcttg 120 cacctcccag ggtgtgtccc ctgcgtgaag gtcgggaaca cgtctacatg ctgggtagct 180 ctcaccccta ctgtggctgc accatacctg aatgctccgc ttgagtcttt gagacgccac 240 gtggatctga tggtaggcag cgccactctt tgctccgccc tttacatcgg ggacctgtgt 300 gggggtgtgt tcctggtcgg ccaactattc accttccaac ctcgccgcca ctggactact 360 caagagtgca actgctcc 378 // ID MH899555; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899555; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR54SD polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; c03d6f6eca7636266465527d132692a6. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR54SD" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46961.1" FT /translation="LSCLTVPASAYNYRNSSGVYHVTNDCPNSSIVYETDHHILHLPGC FT VPCVRAGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 65 A; 131 C; 95 G; 87 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacgtcacca acgactgccc gaactcgagc atagtctatg agaccgatca ccacatcttg 120 caccttccgg ggtgcgtccc ctgcgtgagg gccgggaaca cgtccacatg ctgggtggct 180 ctcaccccca ccgtggctgc accgtacctg aatgctccgc ttgagtcttt gaggcgtcac 240 gtggatctga tggtaggcag cgccaccctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattt accttccaac ctcgccgcca ctggaccact 360 caagactgca actgctcc 378 // ID MH899556; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899556; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR55DS polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; d30ac6cc7db99699216d7c4e069f7197. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR55DS" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46962.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYETEHHILHLPGC FT VPCVRRENTSSCWVALTPTVAAPSLNAPLESLRRHVDMMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 67 A; 131 C; 94 G; 86 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacatcacta acgactgccc gaactcgagc atagtctatg agaccgagca ccacatcttg 120 cacctcccgg gatgcgtccc ttgcgtgagg cgcgagaaca cgtccagctg ctgggtggct 180 ctcaccccca ccgtggctgc accatccctg aatgctccgc ttgagtcttt gagacgccac 240 gtggacatga tggtgggcag cgctaccctt tgctccgccc tttacatcgg agacttgtgt 300 gggggtgtgt tcttggtcgg ccaattattc accttccagc ctcgccgcca ctggaccact 360 caagactgca actgctcc 378 // ID MH899557; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899557; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR56FT polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 7ac87143b677c24bacb2cd5bb5bb8ba1. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR56FT" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46963.1" FT /translation="LSCLTVPASAYNYRNISGVYHITNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATICSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 70 A; 125 C; 90 G; 93 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacatctc gggcgtctac 60 cacatcacca acgactgccc gaactcaagc atagtctatg aggccgacca ccacatcttg 120 caccttccgg gatgcgtccc ttgcgtgagg gtcgggaaca cgtctacatg ctgggtggct 180 ctcactccca ccgtggccgc accatacctg aatgctccgc ttgagtcttt gagacgtcac 240 gtggatctga tggtaggcag cgccaccatt tgctccgccc tttacatcgg agacctatgt 300 gggggtgtgt tcctggttgg tcaattattt accttccagc ctcgccgcca ttggactact 360 caagactgca actgctcc 378 // ID MH899558; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899558; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR57AT polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; bebd7d4b32460bcf4352f429969f4cc3. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR57AT" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46964.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYEADHHILHLPGC FT VPCVRTGNTSTCWVALTPTVAAPHLDAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFRPRLHWTTQDCNCS" XX SQ Sequence 378 BP; 66 A; 126 C; 93 G; 93 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacatcacca atgactgccc gaactcgagc atagtttacg aagccgatca ccacatcttg 120 cacctcccgg ggtgcgtccc ctgtgtgagg accgggaaca cgtctacatg ctgggtggct 180 ctcactccca ccgtggctgc accacacctg gatgctccgc ttgagtctct gagacgtcat 240 gtggatctga tggtaggcag cgccaccctt tgttctgccc tttatatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattc accttccgac ctcgcctcca ctggactact 360 caggactgca actgctcc 378 // ID MH899559; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899559; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR58NT polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 44feee1cb3414fadb50445ece97d8ab6. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR58NT" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46965.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYETEHHILHLPGC FT VPCVRVGNTSTCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 71 A; 124 C; 91 G; 92 T; 0 other; ctctcgtgcc tgactgttcc tgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacatcacca acgactgccc gaactcaagc atagtctatg agaccgagca ccacatcttg 120 cacctcccag ggtgcgtccc ctgcgtgagg gttgggaaca cgtctacatg ctgggtggct 180 cttaccccca ccgtggctgc accatatctg aatgctccgc ttgagtcctt gagacgtcac 240 gtggatctga tggtaggcag cgccactctt tgctctgctc tctacatcgg agacctatgt 300 gggggtgtgt tcttggtcgg ccaattattt accttccaac ctcgccggca ctggactacc 360 caagactgca actgctcc 378 // ID MH899560; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899560; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR60ME polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; fa7030c09e030cf574d6ca13c0a03d4b. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR60ME" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46966.1" FT /translation="LSCLTVPASAYNYRNSSGTYHVTNDCPNSSIVYETEHHILHLPGC FT VPCVRSGNTSTCWVALTPTVAAPYLNAPLASLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 68 A; 132 C; 91 G; 87 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggtacctac 60 cacgtcacca acgactgccc gaactcgagc atagtctatg agaccgaaca ccacatcttg 120 cacctcccgg ggtgcgtccc ctgcgtgagg tccgggaaca cgtctacatg ctgggtggct 180 ctcaccccca ccgtggctgc accatacctg aatgctccgc ttgcgtcttt gagacgtcac 240 gtggatctga tggtaggtag cgccaccctc tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattt accttccaac ctcgccgcca ctggaccact 360 caagactgca actgctcc 378 // ID MH899561; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899561; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR63MB polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 2b633edad1a124ed35b28d9d8c2f6db0. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR63MB" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46967.1" FT /translation="LSCLTVPASAYNYRNSSGVYHVTNDCPNSSIVYETDHHILHLPGC FT VPCVKVGNTSTCWVALTPTVAAPHLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 67 A; 132 C; 93 G; 86 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacgtcacca acgactgccc gaactcaagc atagtctatg agaccgatca ccacatcttg 120 cacctcccgg ggtgcgtccc ttgcgtgaag gtcgggaaca cgtctacatg ctgggtggct 180 ctcaccccca ccgtggctgc gccgcacctg aatgctccgc ttgagtccct gagacgtcac 240 gtggatctga tggtaggcag cgccaccctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattc accttccaac ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MH899562; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899562; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR64MC polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 692b448ebe26815867c190c07f4a1526. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR64MC" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46968.1" FT /translation="LSCLTVPASAYNFRNSSGVYHITNDCPNSSIVYEADHHILHLPGC FT VPCVRTGNMSKCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 67 A; 128 C; 93 G; 90 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactttc gcaacagctc gggcgtctat 60 cacatcacca acgactgccc gaactcgagc atagtctatg aggccgatca tcacatcttg 120 cacctcccgg ggtgcgtccc ctgcgtgagg accgggaaca tgtccaaatg ctgggtggct 180 ctcactccca ccgtggctgc accatacctg aatgctccgc ttgagtctct gagacgtcac 240 gtggatctga tggtaggtag cgccaccctc tgttccgccc tttacatcgg ggacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattc accttccaac ctcgccgcca ctggactacc 360 caagactgca actgctcc 378 // ID MH899563; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899563; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR65KK polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; ed147933c427d6b15c07a130b20fe94b. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR65KK" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46969.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNVSNCWVALTPTVAAPYLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 67 A; 128 C; 93 G; 90 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacatcacca acgactgccc gaactcgagc atagtctatg aggccgatca ccacatctta 120 cacctcccgg ggtgcgtccc ctgcgtgagg gtcgggaacg tgtctaactg ctgggtggct 180 ctcaccccca ccgtggctgc gccatacctg aatgctccgc ttgagtcttt gagacgccac 240 gtggatctga tggtaggcag cgccaccctt tgctccgccc tttacatcgg agacctatgt 300 gggggtgtgt ttttggtcgg ccaattattt accttccaac ctcgccgcca ctggaccact 360 caagactgca actgttcc 378 // ID MH899564; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899564; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR66HB polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 8162239cbdcd6d5cab7776c3eb17334b. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR66HB" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46970.1" FT /translation="LSCLTVPASAYNYRNSSGVYHVTNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNTSRCWVALTPTVAAPYLNAPLESLRRHVDMMVGAATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 66 A; 126 C; 95 G; 91 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaatagctc gggcgtctac 60 catgtcacca acgactgccc gaactcgagc atagtctatg aggccgatca tcacatcttg 120 cacctcccgg ggtgcgtccc ctgcgtgagg gttgggaaca cgtctagatg ctgggtggct 180 ctcaccccca ccgtggccgc accatacctg aatgctccgc ttgagtcttt gagacgtcat 240 gtggacatga tggtaggtgc cgccaccctt tgctccgccc tttacatcgg agacctgtgt 300 gggggtgtgt tcttggtcgg ccaattattc accttccaac ctcgccgcca ctggaccact 360 caagactgca actgctcc 378 // ID MH899565; SV 1; linear; genomic RNA; STD; VRL; 378 BP. XX AC MH899565; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Hepacivirus C strain Kayseri isolate TR.ASR67FD polyprotein gene, partial DE cds. XX KW . XX OS Hepacivirus C OC Viruses; Riboviria; Flaviviridae; Hepacivirus. XX RN [1] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT "HCV genotype 4d infections in Kayseri, Turkey are healthcare related"; RL Unpublished. XX RN [2] RP 1-378 RA Gokahmetoglu S., Polat C., Atalay M.A., Sezgin G.C., Ergor G., Aygen B., RA Gursoy S., Abacioglu H.; RT ; RL Submitted (12-SEP-2018) to the INSDC. RL Department of Medical Microbiology, Dokuz Eylul University, Faculty of RL Medicine, Mithatpasa, Izmir 35340, Turkey XX DR MD5; 22bb79ec386a12199ed4d9a9a977eacd. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..378 FT /organism="Hepacivirus C" FT /host="Homo sapiens" FT /strain="Kayseri" FT /isolate="TR.ASR67FD" FT /mol_type="genomic RNA" FT /country="Turkey" FT /note="genotype: 4d" FT /db_xref="taxon:11103" FT CDS <1..>378 FT /codon_start=1 FT /product="polyprotein" FT /note="core/E1 protein" FT /protein_id="QCF46971.1" FT /translation="LSCLTVPASAYNYRNSSGVYHITNDCPNSSIVYEADHHILHLPGC FT VPCVRVGNTSTCWVALTPTVAAPHLNAPLESLRRHVDLMVGSATLCSALYIGDLCGGVF FT LVGQLFTFQPRRHWTTQDCNCS" XX SQ Sequence 378 BP; 66 A; 128 C; 94 G; 90 T; 0 other; ctctcgtgcc tgactgttcc cgcttcggcc tacaactatc gcaacagctc gggcgtctac 60 cacatcacca atgattgccc gaactcgagc atagtctacg aggccgatca ccacatcttg 120 cacctcccgg ggtgcgtccc ctgcgtgagg gtcgggaaca cgtctacatg ctgggtggct 180 ctcaccccca ccgtggctgc gccacacctg aatgctccgc ttgagtcttt gagacgtcac 240 gtggatctga tggtaggcag cgccactctc tgctccgccc tttacatcgg agacctatgt 300 gggggtgtgt tcttggtcgg tcagttattc actttccaac ctcgccgcca ctggactact 360 caagactgca actgctcc 378 // ID MK133142; SV 1; linear; genomic DNA; STD; VRL; 1310 BP. XX AC MK133142; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 1-A5 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 67301862c1620ffd66ba96c3ed5a9e23. XX FH Key Location/Qualifiers FH FT source 1..1310 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="1-A5" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1310 FT /gene="pol" FT CDS <1..>1310 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ57980.1" FT /translation="SSEQTRANSPTSREFRVRRGHSPLPEARAEGEGAIPLSLPQITLW FT QRPLVAVKIGGQLIEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYDQILIE FT ICGKKAIGTVLVGPTPINIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKIKQWP FT LTEEKIKALTEICADMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRT FT QDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSLNNETPGIR FT YQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPEIVIYQYMDDLYVGSDLEIEQHRAKM FT EELRQHLLSWGFTTPDKKHQKDPPFHWMGYELHPDKWTVQPIQLPSKESWTVNDIQKLV FT GKLNWASQIYPGIKVKQLCRLLRGAKALTDIVPLTAEA" XX SQ Sequence 1310 BP; 507 A; 238 C; 276 G; 289 T; 0 other; tcttcagaac agaccagagc caacagcccc accagcagag agtttcgggt tcggagagga 60 catagccccc tcccagaagc aagagcagaa ggagaaggag ctatacccct tagcctccct 120 caaatcactc tttggcagcg acccctagtc gcagtaaaaa tagggggaca gctaatagaa 180 gccctattag acacaggagc agatgataca gtattagaag atataaattt accaggaaaa 240 tggaaaccaa aaatgatagg gggaattgga ggttttatca aagtaagaca atatgatcaa 300 atacttatag aaatttgtgg aaaaaaggct atagggacgg tattagtagg acctacacct 360 atcaacataa ttgggagaaa tatgttgact caaattggtt gtactttaaa ttttccaatt 420 agtcctattg aaactgtacc agtaaaatta aagccaggaa tggacggccc aaagattaaa 480 cagtggccat taacagaaga gaagataaaa gccttaacag aaatttgtgc agacatggaa 540 aaggaaggaa aaatttcaaa aattgggcct gaaaatccat acaacactcc aatatttgcc 600 ataaagaaaa aagacagtac taaatggaga aaattagtag atttcaggga actcaataaa 660 agaactcaag acttctggga ggtccaatta ggaatacctc atcctgcggg gttaaaaaag 720 aaaaaatcag taacagtact agatgtaggg gatgcatatt tttcagttcc cctagataag 780 gactttagaa agtatactgc attcactata cctagtttaa ataatgagac accagggatt 840 agataccagt acaatgtact cccacaggga tggaaaggat caccagcaat atttcaaagt 900 agcatgacaa aaatcttaga gccctttagg ataaaaaatc cagaaatagt gatctaccaa 960 tatatggatg atttatatgt aggatctgac ttagaaatag agcagcatag agcaaaaatg 1020 gaagagttaa ggcaacatct actgagctgg ggatttacca caccagacaa aaaacatcag 1080 aaagatcctc cattccattg gatgggatat gagctccatc ctgacaaatg gacagtacaa 1140 cctatacagc tgccaagcaa agaaagctgg actgtcaatg atatacaaaa gttagtggga 1200 aaattaaatt gggcaagtca gatttatcca ggaattaaag taaaacagct atgcaggctc 1260 cttagggggg ccaaagcact aacagacata gtaccactga ctgcagaagc 1310 // ID MK133143; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133143; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 1-D9 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; e4d2bb96447d0c1f8d933c1fce81fd37. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="1-D9" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ57981.1" FT /translation="SSEQTRANSPTSRELRVWGGDNPLSETGDERQGTEPSFSFPQITL FT WQRPLVTIKIGGQLREALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVKQYDQVLI FT EICGQKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQW FT PLTEEKIKALTDICTDMEKEGKISRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDPNFRKYTAFTIPSVNNATPGI FT RYQYNVLPQGWKGSPAIFQCSMTKILEPYRTKNPEVVIYQYMDDLYVGSDLEIGQHRTK FT IEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQSIQLPDKESWTVNDIQKL FT VGKLNWASQIYSGIKVKQLCRLLRGTKALTDIVPLTAEA" XX SQ Sequence 1313 BP; 499 A; 227 C; 284 G; 303 T; 0 other; tcttcagagc agaccagagc caacagcccc accagcagag agcttcgggt ttggggagga 60 gataaccccc tctccgaaac aggagacgag agacaaggaa cagagccctc ctttagcttc 120 cctcagatca ctctttggca acgacccctt gttaccataa aaataggggg acagttaagg 180 gaagctctat tagatacagg agcagatgat acagtattgg aagatataaa tttgccagga 240 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaaa acagtatgat 300 caagtactta tagaaatttg tggacaaaag gctataggta cagtgttagt aggacctaca 360 cctgtcaaca taattggaag aaatatgttg actcaaattg gctgtacttt aaattttccg 420 attagtccta ttgaaactgt accagtaaaa ttaaaaccag gaatggatgg cccaaaggtt 480 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagacatatg tacagatatg 540 gaaaaggaag gaaaaatttc aagaattggg cctgaaaatc catacaatac tccaatattt 600 gccataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag ggaacttaat 660 aaaagaactc aagatttttg ggaagtgcag ttaggaatac cacatcctgc agggttaaaa 720 aagaaaaaat cagtaacagt attagatgtg ggggatgcat atttttcagt tcccttagat 780 ccaaatttca ggaaatatac tgcattcact atacctagtg tcaacaacgc gacaccagga 840 attagatatc agtacaatgt gctcccacag ggatggaaag gatcgccagc aatattccaa 900 tgtagcatga caaaaatctt agagccctat agaacgaaaa atccagaggt agttatatac 960 caatacatgg atgatttgta tgtagggtct gatttggaaa tagggcaaca tagaacaaaa 1020 atagaggaac taagagaaca cctattgaaa tgggggttta ctacaccaga caagaagcat 1080 cagaaagaac ccccatttct ttggatgggg tatgaactcc atcctgacaa atggacagtg 1140 cagtctatac aactgccaga taaggaaagc tggactgtca atgatataca gaagttagtg 1200 ggaaaactaa attgggcaag tcagatttat tcagggatta aagtaaagca attatgtaga 1260 ctccttaggg gaaccaaagc actaacagat atagtaccac taactgcaga agc 1313 // ID MK133144; SV 1; linear; genomic DNA; STD; VRL; 1331 BP. XX AC MK133144; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 1-B2 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1331 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1331 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; bdd18f5429142b80098f94c13a4a6f02. XX FH Key Location/Qualifiers FH FT source 1..1331 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="1-B2" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1331 FT /gene="pol" FT CDS <1..>1331 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ57982.1" FT /translation="SSEQARANSPTSRANSPTSRELQVRRGDSPLPEAGTKGKGAISLS FT FPQITLWQRPLVTVRIGGQLIEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQ FT YDDILIEIGGKKAIGTVLVGPTPINIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDG FT PRIKQWPLTEEKIKALTEICLEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDF FT RELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLHEDFRKYTAFTIPSIN FT NETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRSKNPDLVIYQYMDDLYVGSDLEI FT GQHRAKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTIQAIKLPEKDSWTV FT NDIQKLVGKLNWASQIYSGIKVKQLCKLLRGTKALTEIVPLTAEA" XX SQ Sequence 1331 BP; 512 A; 239 C; 284 G; 296 T; 0 other; tcttcagaac aggccagagc caacagcccc accagcagag ccaacagccc caccagcaga 60 gagcttcagg ttcggagggg agatagcccc ctcccagaag caggaaccaa aggaaaagga 120 gccatatccc ttagcttccc tcaaatcact ctttggcagc gacccctagt cacagtaaga 180 atagggggac agctaataga agccctatta gacacaggag cagatgacac agtattagaa 240 gatataaatt taccaggaaa atggaaacca aaaatgattg ggggaattgg agggtttatc 300 aaagtaagac aatatgatga catacttata gaaattggag gaaaaaaggc tatagggaca 360 gttttagtag gacctacacc tattaatata attgggagaa atatgttaac tcaaattggt 420 tgtactttaa attttccaat tagtcctatt gaaactgtac cagtaaaatt aaagccaggg 480 atggatggcc caaggattaa acaatggcca ttgacagaag agaaaataaa agcattaaca 540 gaaatttgtt tggaaatgga gaaggaagga aaaatttcaa aaattgggcc tgaaaatcca 600 tacaacactc caatatttgc cataaagaaa aaagacagta ctaaatggag aaaattagtg 660 gatttcagag agctcaataa aagaactcaa gacttttggg aggtccaatt aggaatacct 720 catccagcag gtttaaaaaa gaaaaaatca gtaacagtac tggatgtagg ggatgcatat 780 ttttcagttc ctttacatga agactttaga aagtatactg cattcactat acctagtata 840 aacaatgaga caccaggaat cagatatcag tacaatgtgc tgccacaggg atggaaagga 900 tcaccagcaa tatttcagtg tagcatgaca aaaatcttag agccctttag atcaaaaaac 960 ccagatctag ttatctatca atacatggat gacttgtatg taggctctga cttagaaata 1020 gggcagcata gagcaaaaat agaggagtta agagaacact tactgagatg ggggtttacc 1080 acaccagata aaaaacatca gaaggaacct ccatttcttt ggatgggata tgaactccat 1140 cctgacaaat ggacaatcca ggctataaag ctgccagaaa aggacagttg gactgtcaat 1200 gatatacaga aattagtggg aaaactaaac tgggcaagtc agatctattc agggataaaa 1260 gtaaaacaat tatgtaaact ccttaggggg accaaagcac taacagaaat agtaccactg 1320 actgcagaag c 1331 // ID MK133145; SV 1; linear; genomic DNA; STD; VRL; 1316 BP. XX AC MK133145; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 1-A6 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1316 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1316 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; a1db35dfcf9fbee12eec06e9933c9564. XX FH Key Location/Qualifiers FH FT source 1..1316 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="1-A6" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1316 FT /gene="pol" FT CDS <1..>1316 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ57983.1" FT /translation="SSEQNRANSPTSRGLGDEGRDLPSESGAEGQGQGAAPSFSFPQIT FT LWQRPLVTVRIGGQLKEALLDTGADDTVLEDIDLPGKWKPKMIGGIGGFIKVRQYDQIL FT IEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIDTVSVTLKPGMDGPKVKQ FT WPLTEEKIKALTEICMEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNK FT RTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKNFRKYTAFTIPSINNETPG FT VRYQYNVLPQGWKGSPAIFQSSMTKILEPFRSQNPEIVIYQYMDDLYVGSDLEIGQHRA FT KIEELRAHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPITLPEKDSWTVNDIQK FT LVGKLNWASQIYPGIKVRQLCKLLRGAKALTDIVPLTEEA" XX SQ Sequence 1316 BP; 495 A; 231 C; 293 G; 297 T; 0 other; tcctcagaac agaatagagc caacagcccc accagcagag gacttgggga tgagggaagg 60 gacctcccct ccgaatcagg agcagaggga cagggacagg gagctgcccc ctcctttagt 120 ttccctcaaa tcactctttg gcagcgacca cttgtcacag taagaatagg aggacaacta 180 aaagaagcac tattagatac aggagcagat gatacagtat tagaagacat agatttgcca 240 ggaaaatgga aaccaaaaat gataggggga attggaggtt ttatcaaagt aagacagtat 300 gatcagatac ttatagaaat ctgtggaaaa aaggctatag gtacagtgtt agtaggacct 360 acacctgtca acataattgg aagaaatatg ttgactcaga ttggttgtac tttaaatttt 420 ccaattagtc ctattgacac tgtatcagta acattaaagc caggaatgga tggcccgaag 480 gttaaacaat ggccattgac agaagaaaaa ataaaagcac taacagaaat ttgtatggag 540 atggaaaagg aaggaaaaat ttcaaaaatt gggcctgaaa atccatacaa tactccagta 600 ttcgctataa agaaaaagga cagtacaaaa tggaggaaat tagtggattt cagagaactt 660 aacaaaagaa ctcaggactt ctgggaagtt caattaggaa taccgcatcc agcgggttta 720 aaaaagaaaa aatcagtaac agtactagat gtaggggacg catatttttc agttccttta 780 gataaaaact tcagaaaata tactgcgttc accataccta gtataaacaa tgagacacca 840 ggagtcaggt atcagtacaa tgtgcttcca cagggatgga agggatcacc agcaatattc 900 caaagtagca tgacaaaaat cttagagccc tttagatcac aaaatccaga aatagttatc 960 tatcagtata tggatgactt gtatgtagga tcagatttag aaatagggca gcatagagca 1020 aaaatagagg agttgagagc tcatctattg aggtggggat ttactacacc agataaaaaa 1080 catcagaaag aacccccatt tctttggatg ggatatgaac tccatcctga caaatggaca 1140 gtccagccta taacactgcc agaaaaagac agctggactg tcaatgatat acagaaattg 1200 gtgggaaaat taaattgggc aagtcagatt tatccaggga ttaaagtaag gcaactatgt 1260 aaactcctca ggggagccaa agcactaaca gatatagtac ccttgactga ggaagc 1316 // ID MK133146; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133146; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 1-E9 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 2c7684d95cebb290c492ded93273b468. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="1-E9" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ57984.1" FT /translation="SSEQTGAIGPASRDLWDEGRDNLSPETGAEGQGTAPSLNFPQITL FT WQRPVVTVKVEGQLKEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYDQVQI FT EICGKKAIGSVLVGPTPVNIIGRNILTQIGCTLNFPISPIETVPVKLKPGMDGPRVKQW FT PLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGI FT RYQYNVLPQGWKGSPAIFQSSMTKILEPFRTRNPEMVIYQYMDDLYVGSDLEIGQHRAK FT IEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTGQPIQLPDKESWTVNDIQKL FT VGKLNWASQIYPGIKVKNLCKLLRGAKALTDIVPLTAEA" XX SQ Sequence 1313 BP; 501 A; 236 C; 290 G; 286 T; 0 other; tcctcagagc agaccggagc catcggcccc gccagcagag atctttggga tgagggaaga 60 gataacctca gccccgaaac aggagcagaa ggacaaggaa cagccccctc cctcaatttc 120 cctcaaatca ctctttggca acgacccgtt gtcacagtaa aagtagaagg acagctaaaa 180 gaagccctgt tagacacagg agcagatgat acagtattag aagagataaa tttgccagga 240 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acaatatgat 300 caagtacaga tagaaatttg tggaaaaaag gctataggtt cagtattagt aggacctaca 360 cctgtcaata taattggacg aaatatattg actcagattg gttgtacttt aaattttccc 420 attagtccta ttgaaactgt accagtgaaa ttaaagccag gaatggatgg cccaagggtt 480 aaacaatggc cactgacaga agaaaaaata aaagcattaa cagaaatttg tacagagatg 540 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catataatac tccaatattt 600 gccataaaga aaaaagacag cactaagtgg agaaaattag tagatttcag agaacttaat 660 aaaagaactc aagatttttg ggaagtgcaa ttaggaatac cacaccctgc tgggttaaaa 720 aagaaaaaat cagtcacagt gttagatgtg ggggatgcat atttttcagt ccctctagat 780 gaagatttca ggaagtatac tgcattcact atacccagca ttaataatga gacaccaggg 840 attaggtatc aatacaatgt gctaccacag ggatggaaag gatcaccagc aatattccag 900 agtagcatga caaaaatctt agaacccttc agaacaagga atccagaaat ggtcatatac 960 caatacatgg atgatttgta tgtagggtct gacctagaaa tagggcaaca cagagcaaaa 1020 atagaggagt taagagaaca cctcttgaga tggggattta ccacaccaga caaaaagcat 1080 cagaaagaac ccccatttct ttggatgggg tatgaactcc accctgacaa atggacaggg 1140 cagcctatac aactgccaga caaggaaagc tggactgtaa atgatataca gaaattggtg 1200 ggaaaactaa attgggcaag tcagatttat ccagggatta aagtgaagaa cttatgtaaa 1260 ctccttaggg gagcaaaagc actaacagac atagtaccat taactgcaga ggc 1313 // ID MK133147; SV 1; linear; genomic DNA; STD; VRL; 1310 BP. XX AC MK133147; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 1-D1 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; ad0a97654305a54655c9fd4a50660003. XX FH Key Location/Qualifiers FH FT source 1..1310 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="1-D1" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1310 FT /gene="pol" FT CDS <1..>1310 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ57985.1" FT /translation="SSEQARANSPTSRECRVRRGDSPLPEAGAEERGAISSNFPQITLW FT QRPLVTIKVGGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVKQYDQILIE FT IEGRKAIGTVLIGPTPVNIIGRNILTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWP FT LTEEKIKALTEICQEMEKEGKITKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRT FT QDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDENFRKYTAFTIPSINNETPGVR FT YQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPEIVIYQYMDDLYVGSDLEIGQHRAKI FT EELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPDKDSWTVNDIQKLV FT GKLNWASQIYPGIKVKQLCKLLRGAKALTDIVPLTEEA" XX SQ Sequence 1310 BP; 495 A; 226 C; 293 G; 296 T; 0 other; tcttcagaac aggccagagc caacagcccc accagcagag agtgtcgggt tcggagagga 60 gacagtcccc tccccgaagc aggagcagaa gaaagaggag ctatatcctc taacttccct 120 caaatcactc tttggcaacg acccctagtt acaataaaag taggggggca actaaaagaa 180 gctctattag atacaggagc agatgataca gtattagaag acataaattt gccaggaaaa 240 tggaaaccaa aaatgatagg gggaattgga ggttttatca aagtaaaaca gtatgatcag 300 atacttatag aaattgaggg aagaaaggct atagggacag tattaatagg acctactcct 360 gtcaacataa ttgggagaaa tatattgact cagattggtt gtaccttaaa ttttccaatt 420 agtcctattg aaactgtacc agtaaaatta aagccaggaa tggatggccc aaaggttaaa 480 cagtggccat tgacagaaga gaaaataaaa gcattaacag agatttgtca agaaatggaa 540 aaggaaggaa agattacaaa aattgggcct gaaaatccat acaatactcc aatatttgct 600 ataaagaaaa aagatagtac taaatggaga aaattagtag atttcaggga gctcaataaa 660 agaactcagg atttctggga agttcaatta ggaataccgc acccagcggg tctgaaaaag 720 aaaaaatcag taacagtact agatgtgggg gacgcatatt tttcagttcc tttagatgaa 780 aactttagaa agtatactgc gttcaccata cctagtataa acaatgagac accaggagtc 840 aggtatcagt acaatgtgct cccacaggga tggaaaggat caccagcaat attccagagt 900 agcatgacaa aaattctaga gccctttaga gcaaaaaacc cagaaatagt tatttatcaa 960 tacatggatg acttgtatgt aggatctgat ttagaaatag ggcagcatag agcaaaaata 1020 gaggagttga gagctcatct gttgagctgg ggatttacta caccagataa aaagcatcag 1080 aaagaacctc catttttgtg gatggggtat gaactccatc cagacaaatg gacagtccaa 1140 cctatagtgc tgcctgacaa ggacagctgg actgttaatg acatacagaa attggtagga 1200 aaactaaatt gggcaagtca gatctatcca ggaattaaag taaagcaatt atgtaaactc 1260 cttaggggag ccaaagcact aacagatata gttccactga ctgaggaggc 1310 // ID MK133148; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133148; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 1-D2 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 2b9f098183e927815a3980d66ea8aa2c. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="1-D2" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ57986.1" FT /translation="SSEQTRANGPTSRELWDGGRDSLPSEAGIEGQGAIPSFNLPQITL FT WQRPVISAKIGGQLIEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYDQILI FT EICGKRAIGTVLVGPTPVNIIGRNILTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQW FT PLTEEKIKALTEICLEMEREGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKRSVTVLDVGDAYFSVPLDESFRKYTAFTIPSTNNETPGV FT RYQYNVLPQGWKGSPAIFQASMTKILMPFRAKNPEMVIYQYMDDLYVGSDLEIGQHRAK FT IEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKESWTVNDIQKL FT VGKLNWASQIYAGIKVKQLCRLLRGAKALTDIVPLTEEA" XX SQ Sequence 1313 BP; 501 A; 227 C; 289 G; 296 T; 0 other; tcctcagagc agaccagagc caacggcccc accagcagag agctttggga tggaggaaga 60 gatagcctcc cctccgaagc aggaatcgag ggacaagggg ctataccctc ctttaacctc 120 cctcaaatca ctctttggca acgaccagta atctcagcaa aaataggggg acaactaata 180 gaagctctgt tagacacagg agcagatgat acagtattag aagaaataaa tttaccagga 240 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acaatatgat 300 cagatactta tagaaatatg tggaaaaagg gctataggta cagtgttagt aggacccaca 360 cctgtcaata taattggacg aaatatattg actcagattg gatgtacttt aaattttcca 420 attagtccta ttgaaactgt accagtaaaa ttaaaaccag gaatggatgg cccaaaagtt 480 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagaaatttg tctagagatg 540 gaaagggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtgttt 600 gccataaaga aaaaagatag tactaaatgg agaaagttag tagatttcag agaactcaat 660 aaaagaactc aagacttctg ggaggtccaa ttaggaatac ctcatcccgc gggattaaaa 720 aagaaaagat cagtaacagt actagatgtg ggagatgcat atttttcagt tcccttagat 780 gaaagtttta ggaagtatac tgcattcact atacctagta caaataatga gacaccaggg 840 gttagatatc agtacaatgt gctcccgcag ggatggaaag gatcaccagc aatatttcag 900 gctagcatga caaaaatctt aatgcccttt agagcaaaaa atccagagat ggtgatctat 960 caatatatgg atgatttgta tgtagggtct gacttagaga tagggcagca tagagcaaaa 1020 atagaggaat tgagagaaca tctactaaga tggggattta ctacaccaga caaaaaacat 1080 cagaaagaac ctccatttct gtggatggga tatgaactcc atcctgacaa atggacagtc 1140 cagcctatac agctaccaga aaaggagagc tggactgtca atgatataca gaagttagtg 1200 ggaaaactaa attgggcaag tcagatttat gcaggaatta aagtaaagca actgtgtaga 1260 ctcctcagag gagccaaagc actaacagat atagtaccac taactgagga agc 1313 // ID MK133149; SV 1; linear; genomic DNA; STD; VRL; 1304 BP. XX AC MK133149; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 1-I9 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1304 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1304 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; cbe8ba2029de7178044c17f57d6645e7. XX FH Key Location/Qualifiers FH FT source 1..1304 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="1-I9" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1304 FT /gene="pol" FT CDS <1..>1304 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ57987.1" FT /translation="SSEQTRANSPTSRELQVRGDNPRSEAGAEGRGTTLNFPQITLWQR FT PLVSIKVGGQIKEALLDTGADDTVLEDINLQGKWKPKMIGGIGGFIKVRQYDQIVIEIC FT GKKAIGSVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLT FT EEKIKALTAICEEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQD FT FWEVQLGIPHPAGLKKRKSVTVLDVGDAYFSVPLDKSFRKYTAFTIPSINNETPGIRYQ FT YNVLPQGWKGSPAIFQSSMTKILEPFRTQNPDLVIYQYMDDLYVGSDLEIGQHRAKIEE FT LRGHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKESWTVNDIQKLVGK FT LNWASQIYAGIKVKQLCRLLRGAKALTDIVPLTEEA" XX SQ Sequence 1304 BP; 499 A; 232 C; 285 G; 288 T; 0 other; tcttcagagc agaccagagc caacagcccc accagcagag agcttcaagt tcgaggagac 60 aaccctcgct ccgaagcagg agccgaaggg cggggaacca cccttaactt ccctcagatc 120 actctttggc aacgacccct tgtctcaata aaagtagggg gccagataaa agaagctctc 180 ttagatacag gagcagatga tacagtatta gaagatataa atttacaagg aaaatggaaa 240 ccaaaaatga taggaggaat tggaggtttt atcaaagtta gacagtatga tcaaatagtt 300 atagaaattt gtgggaaaaa ggccataggt tcagtattag taggacctac accagtcaac 360 ataattggaa gaaatatgtt gactcagatt ggatgcacac taaattttcc cattagtccc 420 attgagactg tacctgtaaa attaaaacca gggatggatg gcccaaaagt taaacaatgg 480 ccattgacag aagaaaaaat aaaagcatta acagcaattt gtgaagaaat ggaaaaggaa 540 ggaaaaatta caaaaattgg gcctgaaaat ccatataaca ctccagtatt tgccataaaa 600 aagaaggaca gtactaagtg gagaaaatta gtagatttca gggaactcaa taaaagaact 660 caagactttt gggaagttca attaggaata ccacacccag cagggttaaa aaagaggaaa 720 tcagtgacag tactggatgt gggggatgca tatttttcag ttcctttaga taaaagcttc 780 aggaaatata cggcattcac catacctagt ataaacaatg aaacaccagg gattagatat 840 caatataatg tgcttccaca gggatggaag ggatcaccag caatattcca gagtagcatg 900 acaaaaatct tagagccatt taggacacaa aacccagacc tagttatcta tcaatatatg 960 gatgacttgt atgtaggatc tgatttagaa atagggcaac atagagcaaa aatagaggag 1020 ttaagaggac atttactgaa atggggattt accactccag acaagaaaca tcagaaagaa 1080 cccccatttc tgtggatggg gtatgaactc catcctgata aatggacagt acagcctata 1140 caactgccag acaaagagag ctggactgtc aatgatatac agaagttagt gggaaaacta 1200 aactgggcaa gtcagattta cgcagggatt aaagtaaagc aactgtgtag actccttagg 1260 ggagccaaag cattaacaga tatagtacca ctaactgaag aagc 1304 // ID MK133150; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133150; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 1-E8 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 97f1683e2528d4609581d629a362cfda. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="1-E8" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ57988.1" FT /translation="SSEQTGAIGPTSRDLWNEGRDNLSPEAGAEGQGTAPSLNFPQITL FT WQRPVVTVKVEGQLKEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYDQIQI FT EICGKKAIGTVLVGPTPVNIIGRNILTQIGCTLNFPISPIETVPVKLKPGMDGPRVKQW FT PLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLAKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGI FT RYQYNVLPQGWKGSPAIFQSSMTKILEPFRTKNPQMVIYQYVDDLYVASDLEIGQHRAK FT IEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKESWTVNDIQKL FT VGKLNWASQIYPGIKVKNLCRLLRGTKALTDIVPLTAEA" XX SQ Sequence 1313 BP; 496 A; 232 C; 291 G; 294 T; 0 other; tcctcagagc agaccggagc catcggcccc accagcagag atctttggaa tgagggaaga 60 gataacctca gccccgaagc aggagcagaa ggacaaggaa cagccccctc ccttaatttc 120 cctcaaatca ctctttggca acgacccgtt gtcacagtaa aagtagaagg acagctaaaa 180 gaagccctgt tagacacagg agcagatgat acagtattag aagagataaa tttgccagga 240 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 300 caaatacaga tagaaatttg tggaaaaaaa gctataggta cagtattggt aggacctaca 360 cctgtcaata taattggacg aaatatattg actcagattg gttgtacttt aaattttcca 420 attagtccta ttgagactgt accagtgaaa ttaaagccag gaatggatgg cccgagggtt 480 aaacaatggc cgttgacaga agaaaaaata aaagcgttaa cagaaatttg tacagagatg 540 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catataatac tccaatattt 600 gctataaaga aaaaagacag tactaagtgg agaaaattag tagatttcag agaacttaat 660 aaaagaactc aagatttttg ggaagtgcaa ttaggaatac cacatcctgc tgggttagca 720 aagaaaaaat cagtcacagt attagatgtg ggggatgcat atttttcagt ccctctagac 780 gaagatttca ggaagtatac tgcattcact atacccagca ttaataatga gacaccaggg 840 attagatatc aatacaatgt gctaccacag ggatggaaag gatcaccagc aatattccag 900 agtagcatga caaaaatctt agaacccttc agaacaaaga atccacaaat ggtcatatac 960 caatacgtgg atgatttgta tgtagcgtct gacctagaaa tagggcaaca tagagcaaaa 1020 atagaggagt taagagaaca tctcttgaga tggggattta ccacaccaga caaaaagcat 1080 cagaaagaac ccccatttct ttggatgggg tatgaactcc accctgacaa atggacagtg 1140 cagcctatac aactgccaga caaggagagc tggactgtca atgatataca gaaattggtg 1200 ggaaagctaa attgggcaag tcagatttat ccagggatta aagtgaagaa tttatgtaga 1260 ctccttaggg gaacaaaagc tctaacagac atagtaccat taactgcaga ggc 1313 // ID MK133151; SV 1; linear; genomic DNA; STD; VRL; 1307 BP. XX AC MK133151; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 1-F2 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1307 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1307 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 32d72ff61ff078349dbf76b9c44d304b. XX FH Key Location/Qualifiers FH FT source 1..1307 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="1-F2" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1307 FT /gene="pol" FT CDS <1..>1307 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ57989.1" FT /translation="SSEQTGAISPTSGELWGEGRDTLLYKAGAERQGPSLSFPQITLWQ FT RPLVTVKIGGQLKEALLDTGADDTVLEDINLPGKWKPRMIGGIGGFIKVRQYDQILIEI FT CGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVTLKPGMDGPKVKQWPL FT TEEKIKALTEICNEMEQEGKISRIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQ FT DFWEVQLGIPHPSGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRY FT QYNVLPQGWKGSPAIFQSSMTKILEPFRLKNPELVIYQYMDDLYVGSDLEIGQHRVKIE FT ELRAHLLQWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPNKDNWTVNDIQKLVG FT KLNWASQIYAGIKVRQLCKLLRGAKALTDIVTLTEEA" XX SQ Sequence 1307 BP; 491 A; 219 C; 285 G; 312 T; 0 other; tcctcagagc agaccggagc catcagcccc accagcggag aactttgggg ggagggaaga 60 gataccctcc tctacaaagc aggagcagaa agacagggac cctcccttag tttccctcaa 120 atcactcttt ggcaacgacc tcttgtcaca gtgaaaatag gaggacagct aaaagaagct 180 ctattagaca caggagcaga tgatacagtt ttagaagaca taaatttgcc aggaaaatgg 240 aaaccaagaa tgataggggg aattggaggt tttatcaaag taaggcagta tgatcagata 300 cttatagaaa tttgtggaaa aaaggctatc ggtacagtat tggtagggcc tacacctgtc 360 aacataattg gaagaaacat gttgacccag attggttgta ctttaaattt tccaattagc 420 cctattgaaa ctgtaccagt aacgttaaag ccaggaatgg atggcccaaa ggttaagcaa 480 tggccattga cagaagaaaa aataaaagca ttgacagaga tttgtaatga gatggaacag 540 gaaggaaaaa tttcaagaat tgggcctgaa aatccataca atactccagt atttgctata 600 aagaaaaaag acagtactaa atggagaaaa ttagtagatt tcagagaact taataaaaga 660 actcaagatt tttgggaggt tcaattagga ataccacatc cttctggatt aaagaagaaa 720 aaatcagtaa cagtattgga tgtgggggat gcatattttt cagttccttt agataaggat 780 ttcaggaagt atactgcatt cactatacct agtattaata atgagacacc agggataaga 840 tatcagtaca atgtgcttcc acaaggatgg aaaggatcac cagcaatatt ccaaagtagt 900 atgacaaaaa tcttagagcc ctttagatta aaaaacccag aattagttat atatcaatac 960 atggatgact tgtatgtagg atctgattta gaaataggac agcatagagt aaaaatagag 1020 gagttgagag ctcatttatt gcaatggggg tttaccacac cagacaaaaa gcatcaaaaa 1080 gaacctccat ttctttggat gggatatgaa ctccatcctg acaaatggac agtccagcct 1140 atacagctgc caaataaaga caactggact gtcaatgata tacagaaatt agtgggaaaa 1200 ctaaattggg caagtcaaat ttatgcaggg attaaagtaa gacaactgtg taaactcctc 1260 aggggagcca aagcattaac agatatagta acactgactg aggaagc 1307 // ID MK133152; SV 1; linear; genomic DNA; STD; VRL; 1307 BP. XX AC MK133152; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 1-B8 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1307 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1307 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 65e957b3d13e0c094d358b3d8201ed7f. XX FH Key Location/Qualifiers FH FT source 1..1307 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="1-B8" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1307 FT /gene="pol" FT CDS <1..>1307 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ57990.1" FT /translation="SSEQTGAISSTSRDPRDGGRDNLQAGTEGQGTACSLSFPQITLWQ FT RPIVPVRIEGQLIEALLDTGADDTVLEEINLTGKWKPKMIGGIGGFIKVRQYDQISIEI FT CGQKAIGTVLVGPTPVNIIGRNILTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPL FT TEEKIKALKEICDEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQ FT DFWEVQLGIPHPAGLKKKKSVSVLDVGDAYFSVPLDESFRKYTAFTIPSINNETPGIRY FT QYNVLPQGWKGSPAIFQASMTKILEPFRAQNPEIVIYQYMDDLYVGSDLEIGQHRAKIE FT ELRAHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIELPEKDCWTVNDIQKLVG FT KLNWASQIYPGIKVRQLCKLLRGAKALTDVITLTDEA" XX SQ Sequence 1307 BP; 494 A; 223 C; 289 G; 301 T; 0 other; tcctcagagc agaccggagc catcagctcc accagcagag atcctaggga tgggggaaga 60 gataacctcc aagcaggaac agaaggacag ggaacagcct gctcccttag tttccctcaa 120 atcactcttt ggcaacgacc cattgttccc gtaagaatag aaggacagtt aatagaagct 180 ctattggata caggagcaga tgatacagta ttagaagaaa taaatttaac aggaaagtgg 240 aaaccaaaaa tgataggggg aattggaggt tttatcaaag taagacagta tgatcagata 300 agtatagaaa tttgtggaca aaaagctata ggtacagtat tggtaggacc tacacctgtc 360 aacataattg gaagaaacat attgactcag attggttgta ctttaaattt tccaattagt 420 cctattgaaa ctgtaccagt aaaattaaaa ccaggaatgg atggcccaaa ggttaaacaa 480 tggccattga cagaagaaaa aataaaagca ttaaaagaaa tttgtgatga aatggaaaag 540 gaaggaaaaa tttcaaagat tgggcctgaa aacccatata atactccaat atttgccata 600 aagaaaaagg acagcactaa atggagaaaa ttagtagatt tcagagagct caataaaaga 660 actcaggatt tctgggaagt tcaattagga ataccgcatc cagcaggttt gaaaaagaaa 720 aaatcagtat cagtgctgga tgtgggggat gcatactttt cagtcccttt agatgaaagc 780 tttagaaagt atactgcatt caccatacct agtataaaca atgagacacc aggaattagg 840 tatcagtaca atgtgctacc acagggatgg aaaggatctc cagcaatatt ccaggctagc 900 atgacaaaaa tcttagagcc ctttagggca cagaatccag aaatagttat ctatcaatac 960 atggatgact tgtatgtagg atctgatcta gaaatagggc aacatagagc aaaaatagag 1020 gagttgagag ctcatctgtt aaaatgggga tttactaccc cagacaaaaa gcatcaaaag 1080 gaacctccat ttctttggat ggggtatgaa ctccatcctg acaagtggac agtccagcct 1140 atagaactgc cagaaaagga ctgctggact gtcaatgata tacagaaatt agtgggaaaa 1200 ctaaattggg caagtcagat ttatccaggg attaaggtaa ggcaactatg taaactcctc 1260 aggggagcca aagcactgac agatgtaata acattaactg atgaagc 1307 // ID MK133153; SV 1; linear; genomic DNA; STD; VRL; 1298 BP. XX AC MK133153; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 1-C3 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1298 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1298 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 5aa3f6c224d6275d04bb7fc7d20f5fc1. XX FH Key Location/Qualifiers FH FT source 1..1298 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="1-C3" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1298 FT /gene="pol" FT CDS <1..>1298 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ57991.1" FT /translation="PSEQTRANSPTSRERGDNPLSEAEAGGQGTCSLSLPQITLWQRSL FT VTIKVEGQLREALLDTGADDTVLEEINLTGKWKPKMIGGIGGFIKVRQYDQVAIEICGK FT KAIGAVLVGPTPINIIGRNMLTQLGCTLNFPISPIKTIPVKLKPGMDGPKVKQWPLTEE FT KIKALTAICEEMEREGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFW FT EVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYN FT VLPQGWKGSPSIFQCSMTKILEPFRAQNPEIVIYQYMDDLYVGSDLEIGQHRAKIEELR FT EHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTIQPIQLPEKDSWTVNDIQKLVGKLN FT WASQIYSGIKVKQLCRLLRGAKALTDIVPLTEEA" XX SQ Sequence 1298 BP; 500 A; 231 C; 281 G; 286 T; 0 other; ccttcagagc agaccagagc caacagcccc accagcagag agcgaggaga caatcccctc 60 tctgaagcag aagcaggagg acaaggaacc tgctccctta gtctccctca aatcactctt 120 tggcagcgat cccttgttac aataaaagta gaagggcaac taagggaggc tctcctagat 180 acaggagcag atgatacagt attagaagaa ataaatttga caggaaaatg gaaaccaaaa 240 atgataggag gaattggagg ttttatcaaa gtaagacaat atgatcaagt agctatagaa 300 atttgtggaa aaaaggctat aggtgcagta ttagtaggac ctacacctat caacataatt 360 ggaagaaata tgttgactca gcttggctgc actctaaatt ttccaattag tcctattaaa 420 actataccag taaaattaaa gccaggtatg gatggcccaa aggttaaaca atggccattg 480 acagaagaga aaataaaagc attaacagca atttgtgaag aaatggagag ggaaggaaaa 540 attacaaaaa ttgggcctga aaatccatac aacactccag tatttgccat aaaaaagaag 600 gacagtacta agtggagaaa attagtagat ttcagggaac tcaataaaag aactcaagac 660 ttttgggaag ttcaattagg aataccacac ccagcagggt taaaaaagaa gaaatcagta 720 acagtgctag atgtggggga tgcatatttt tcagttcctt tagatgaaga cttcaggaaa 780 tatactgcat tcaccatacc tagtataaac aatgagacac cagggattag gtatcaatac 840 aatgtgctac cgcagggatg gaaaggatca ccatcaatat tccagtgtag catgacaaaa 900 atcttagagc cctttagggc acaaaaccca gaaatagtca tctatcaata tatggatgac 960 ttgtatgtag gatctgactt agaaataggg caacatagag caaaaataga ggaattaaga 1020 gaacatctat taaagtgggg atttaccaca ccagacaaga aacatcagaa agaacctcca 1080 tttctttgga tggggtatga actccatcct gacaaatgga caatacaacc gatacagctg 1140 ccagaaaagg acagttggac tgtcaatgat atacagaagt tagtgggaaa attaaactgg 1200 gcaagtcaga tttactcagg gattaaagta aaacaattgt gtaggctcct taggggagcc 1260 aaagcactaa cagacatagt accactgact gaagaagc 1298 // ID MK133154; SV 1; linear; genomic DNA; STD; VRL; 1316 BP. XX AC MK133154; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 1-E2 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1316 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1316 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; af4d7c505a1cbdd6a8ecc68b849e8e89. XX FH Key Location/Qualifiers FH FT source 1..1316 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="1-E2" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1316 FT /gene="pol" FT CDS <1..>1316 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ57992.1" FT /translation="SSEQTRTNSPTRRELRVRGGDSPLPEARAEGEGKGAISLSFPQIT FT LWQRPLVTVGIGGQLIEALLDTGADDTVLEDINLPGRWKPKMIGGIGGFIKVRQYDQIL FT IEICGKRAIGTVLVGPTPINIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQ FT WPLTEEKIKALTEICKEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNK FT RTQDFWEVQLGIPHPSGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSVNNETPG FT IRYQYNVLPQGWKGSPAIFQSSMTKILEPFRLKNPEIVIYQYMDDLYVGSDLEIGQHRA FT KVEELRQHLLQWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKESWTVNDIQK FT LVGKLNWASQIYPGIQTKQLCKLLRGTKALTEIVPLTAEA" XX SQ Sequence 1316 BP; 514 A; 236 C; 276 G; 290 T; 0 other; tcttcagaac agaccagaac caacagcccc acccgcagag agcttcgggt tcggggagga 60 gatagccccc tccccgaagc aagagccgaa ggagaaggaa aaggagctat atcccttagc 120 ttccctcaaa tcactctttg gcagcgaccc ctagtcacag taggaatagg gggacaacta 180 atagaagctc tattagatac aggagcagat gatacagtat tagaagacat aaatttacca 240 ggaagatgga agccaaaaat gataggggga attggaggtt ttatcaaagt aagacagtat 300 gatcaaatac ttatagaaat ttgtggaaaa agggctatag ggacagtatt agtaggacct 360 acacctatca acataattgg gagaaatatg ttgactcaga ttggttgtac tttaaatttt 420 ccaattagtc ctattgaaac tgtaccagta aaattaaagc caggaatgga tggcccaaag 480 gttaaacaat ggccattgac agaagagaaa ataaaagcat taacagaaat ctgtaaagaa 540 atggaaaagg aaggaaaaat ttcaaaaatt gggcccgaaa atccatacaa caccccaata 600 tttgccataa agaaaaagga cagtactaaa tggagaaaat tagtagattt cagagagctc 660 aataaaagaa ctcaagactt ctgggaagtc caattaggaa tacctcatcc ctcggggtta 720 aaaaagaaaa aatcagttac agtactagat gtaggggatg catatttttc agttccttta 780 gataaggact ttagaaagta tacagcattc actataccca gtgtaaataa tgagacacca 840 gggattagat atcagtacaa tgtgctgcca cagggatgga aaggatcacc agcaatattt 900 caaagtagca tgacaaaaat cctagagccc ttcagactaa aaaatccaga aatagtgatc 960 taccaatata tggatgattt atatgtagga tctgacttag aaatagggca gcatagagca 1020 aaagtagagg aactaagaca acatctattg caatggggat ttaccacacc agataaaaaa 1080 catcagaaag aacctccatt cctttggatg ggatatgagc tccatcctga caaatggaca 1140 gtacaaccta tacagctacc agataaagaa agctggactg tcaatgatat acaaaagtta 1200 gtaggaaaat taaattgggc aagtcagatt tatccaggga ttcaaacaaa gcaactatgt 1260 aaactcctta gagggaccaa agcactaaca gaaatagtac cactgactgc agaagc 1316 // ID MK133155; SV 1; linear; genomic DNA; STD; VRL; 1304 BP. XX AC MK133155; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 1-G7 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1304 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1304 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 35cdc9f65baa35a1985d8af2c8161c60. XX FH Key Location/Qualifiers FH FT source 1..1304 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="1-G7" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1304 FT /gene="pol" FT CDS <1..>1304 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ57993.1" FT /translation="SSEQTRANSPTSRDLGDGGGDVPPEAGAERQGPSFSFPQITLWQR FT PLVTIKIEGQLREALLDTGADDTVLEDIELTGKWKPKMIGGIGGFIKVRQYDQVLIEIC FT GKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIDTVPVKLKPGMDGPKVKQWPLT FT EEKIKALTEICNDMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQD FT FWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLYEGFRKYTAFTIPSINNETPGIRYQ FT YNVLPQGWKGSPAIFQSSMTKILEPFRAKNPELIIYQYMDDLYVGSDLEIGQHRTKIEE FT LRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGK FT LNWASQIYAGIKVKQLCRLIRGTKALTEIVPLTEEA" XX SQ Sequence 1304 BP; 495 A; 229 C; 287 G; 293 T; 0 other; tcctcagagc agaccagagc caacagcccc accagcagag atcttgggga tgggggagga 60 gatgtccctc ccgaagcagg agcagagaga cagggaccct ccttcagttt ccctcaaatc 120 actctttggc aacgacccct tgttaccata aaaatagagg gacagctgag agaggctcta 180 ttagatacag gagcagatga tacagtatta gaagacatag aattgacagg aaaatggaaa 240 ccaaaaatga tagggggaat tggaggcttt atcaaagtaa gacaatatga tcaggtacta 300 atagaaattt gtggaaaaaa ggctataggt acagtgttag taggacctac acctgtcaac 360 ataattggac gaaatatgtt gactcagatt ggttgtactt taaattttcc aattagtcct 420 attgacactg tgccagtaaa attaaagcca ggaatggatg gcccaaaggt taaacaatgg 480 ccattgacag aagaaaaaat aaaagcatta acagaaattt gtaatgacat ggaaaaggaa 540 ggaaaaatct caaaaatcgg gcctgagaat ccatacaata ctccaatatt tgctataaag 600 aaaaaggaca gcactaaatg gagaaaatta gtagatttca gagagctcaa taagagaact 660 caggacttct gggaagtcca attaggaata ccgcatccag caggcttaaa aaagaaaaaa 720 tcagtaacag tactggatgt gggggatgca tatttttcag ttcctttata tgaaggcttc 780 agaaagtata ctgcattcac catacctagt ataaataatg agacaccagg aatcagatat 840 cagtataatg tgctgccaca gggatggaaa ggatcaccag caatattcca gagtagtatg 900 acaaaaattt tagagccctt tagagcaaaa aatccagaat taattattta ccaatatatg 960 gatgacttgt atgtaggatc tgatttagaa atagggcagc atagaacaaa aatagaagag 1020 ctaagagctc atctattgag ctgggggttt actacaccag ataaaaagca tcagaaagaa 1080 cctccattcc tttggatggg atatgaactc catcctgaca aatggacagt ccagcctata 1140 caactgccag aaaaggacag ctggactgtc aatgatatac agaaattagt gggaaaacta 1200 aactgggcaa gtcaaattta tgcagggatt aaggtaaaac aactgtgtag actcatcagg 1260 ggaaccaaag cactaacaga aatagtacca ctgactgaag aagc 1304 // ID MK133156; SV 1; linear; genomic DNA; STD; VRL; 1322 BP. XX AC MK133156; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 1-I1 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1322 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1322 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; cb7603c233d5283a1ec4a89aac4dbd3a. XX FH Key Location/Qualifiers FH FT source 1..1322 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="1-I1" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1322 FT /gene="pol" FT CDS <1..>1322 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ57994.1" FT /translation="PSEQTRANSPTSRANSPTSRELRVRGETPCSEAGVEGQGTLNFPQ FT ITLWQRPLVSIRVEGQIKEALLDTGADDTVLEEIKLPGNWKPKMIGGIGGFIKVRQYDQ FT ILIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNFPISPIETVPVKLKPGMDGPKV FT KQWPLTEEKIKALTAICEEMEKEGKITKIGPENPYNTPIFAIKKKDSTKWRKLVDFREL FT NKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSTNNET FT PGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRTKNPEIVIYQYMDDLYVGSDLEIGQH FT RAKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKESWTVNDI FT QKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTDIVPLTEEA" XX SQ Sequence 1322 BP; 506 A; 245 C; 287 G; 284 T; 0 other; ccttcagagc agaccagagc caacagcccc accagcagag ccaacagccc caccagcaga 60 gagcttcggg ttcgaggaga aaccccctgc tccgaagcag gagtcgaagg acaaggaacc 120 cttaacttcc ctcaaatcac tctttggcag cgaccccttg tttcaataag agtagaggga 180 cagataaaag aggctctctt agacacagga gcagatgata cagtattaga agaaataaaa 240 ttgccaggaa attggaagcc aaaaatgata gggggaattg gaggttttat caaagtaaga 300 cagtatgatc aaatactcat agaaatttgt ggaaaaaagg ctataggtac agtactggta 360 ggacctacac ctgtcaacat aattggaaga aatatgttga ctcagcttgg gtgtacacta 420 aattttccca ttagtcctat tgagactgta ccagtaaaat taaagccagg aatggatggt 480 ccaaaggtca aacaatggcc attgacagaa gagaaaataa aagcattaac agcaatttgt 540 gaagaaatgg aaaaagaagg aaaaattaca aaaattgggc ctgaaaatcc atataacact 600 ccaatatttg ccataaaaaa gaaggacagt actaagtgga gaaaattagt agatttcagg 660 gaacttaata aaagaaccca agacttttgg gaagttcaat tagggatacc acacccagca 720 gggttaaaaa agaaaaaatc agtgacagta ctggatgtgg gggatgcata tttttcagtc 780 cctttagatg aaagcttcag gaaatatact gcattcacca tacctagtac gaacaatgaa 840 acaccaggaa ttagatatca gtataatgtg ctcccccagg gatggaaagg atcaccagca 900 atattccaga gtagcatgac aaaaatttta gagcccttta ggacaaaaaa cccagaaata 960 gttatctatc aatatatgga tgacttatat gtaggatctg atttagaaat agggcaacat 1020 agagcaaaaa tagaagagtt aagacaacat ctattgaagt gggggttcac cacaccagac 1080 aagaagcatc agaaagaacc tccatttctt tggatggggt atgaactcca tcctgataaa 1140 tggacagtac agcctataca gctgccagaa aaggaaagct ggactgtcaa tgatatacag 1200 aagttagtgg gcaaattaaa ctgggcaagt cagatttacc caggaatcaa agtaaggcaa 1260 ttgtgtaaac tccttagagg aaccaaagca ctaacagaca tagtaccact gactgaagaa 1320 gc 1322 // ID MK133157; SV 1; linear; genomic DNA; STD; VRL; 1301 BP. XX AC MK133157; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 1-G1 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1301 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1301 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 74e6cb9b4f4c0112c5a46fdf9880c8fc. XX FH Key Location/Qualifiers FH FT source 1..1301 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="1-G1" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1301 FT /gene="pol" FT CDS <1..>1301 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ57995.1" FT /translation="PPEQARADSPTSRELQVRGDNPRPEAGEERQGTFNFPQITLWQRP FT LVTIKIGGQIKEALLDTGADDTVLEGIDLPGKWKPKMIGGIGGFIKVRQYDQIPIEIYG FT KKAIGTVLVGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLSE FT EKIKALTVICDEMEREGKITKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDF FT CEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDENFRKYTAFTIPSRNNETPGIRYQY FT NVLPQGWKGSPAIFQSSMTKILEPFRTKNPDIVIYQYMDDLYVGSDLEIGQHRAKIEEL FT REHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPVKDSWTVNDIQKLVGKL FT NWASQIYSGIKVKQLCKLLRGAKALTDIVPLTEEA" XX SQ Sequence 1301 BP; 495 A; 232 C; 289 G; 285 T; 0 other; cctccagagc aggccagagc cgacagcccc accagcagag agcttcaggt tcgaggagac 60 aacccccgcc cagaagcagg agaagagaga cagggaacct ttaatttccc tcaaatcact 120 ctttggcagc gaccccttgt cacaataaaa atagggggac aaataaaaga ggctctctta 180 gatacaggag cagatgatac agtattagaa ggaatagatt taccaggaaa atggaaacca 240 aaaatgatag gaggaattgg aggttttatc aaagtaagac agtatgatca aatacctata 300 gaaatttatg ggaaaaaggc tataggtaca gtattagtag ggcctacacc tgtcaacata 360 attggaagaa atctgttgac tcagcttgga tgtacactaa attttccaat tagtcccatt 420 gaaactgtac cagtaaaatt aaagccagga atggatggcc caagggttaa acaatggcca 480 ttgtcagagg aaaaaataaa agcgttaaca gtaatttgtg atgaaatgga aagggaagga 540 aaaatcacaa aaattgggcc tgaaaatcca tataacactc caatatttgc cataaaaaag 600 aaggacagta ctaagtggag aaaattagta gatttcaggg aacttaataa gagaactcaa 660 gacttctgtg aagttcaatt aggaatacca cacccagcag ggttaaaaaa gaaaaaatca 720 gtgacagtac tagatgtggg ggatgcctat ttttcagtac ctttagatga aaatttcagg 780 aaatatactg cattcaccat acctagtaga aacaatgaaa caccagggat tagatatcaa 840 tataatgtac ttccacaggg atggaaagga tcaccagcaa tattccagag tagcatgaca 900 aagatcttag agccctttag gacaaagaac ccagacatag ttatctatca atatatggat 960 gacttgtatg tgggatctga cttagaaata gggcaacata gggcaaaaat agaggagtta 1020 agagaacatc tattaaggtg gggatttacc acaccagaca agaaacatca aaaggagccc 1080 ccatttctgt ggatggggta tgaactccat cctgacaaat ggacagtaca gcctatacag 1140 ctgccagtca aggatagctg gactgtcaat gatatacaga agttagtggg aaaattaaac 1200 tgggcaagtc agatttactc agggattaag gtaaaacaac tgtgtaaact ccttagggga 1260 gccaaagcac taacagacat agtaccactg actgaagaag c 1301 // ID MK133158; SV 1; linear; genomic DNA; STD; VRL; 1337 BP. XX AC MK133158; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 1-C9 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1337 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1337 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 6b52dc170a3946e903b3b157a3ca59e0. XX FH Key Location/Qualifiers FH FT source 1..1337 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="1-C9" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1337 FT /gene="pol" FT CDS <1..>1337 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ57996.1" FT /translation="PPEQARANSPTSRGLQARANSPTSRELQVRGSNPRSEAGADRQGT FT LNFPQITLWQRPLVSIKVGGQIKEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKV FT RQYEEILIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNFPISPIETVPVKLKPGM FT DGPKVKQWPLTEEKIKALTAICEEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLV FT DFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEGFRKYTAFTIPS FT INNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAQNSEIVIYQYMDDLYVGSDL FT EIGQHRAKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSW FT TVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGTKALTDIVPLTEEA" XX SQ Sequence 1337 BP; 503 A; 247 C; 302 G; 285 T; 0 other; cctccagaac aggccagagc caacagcccc accagcagag ggcttcaggc cagagccaac 60 agccccacca gtagagagct tcaggttcga ggaagcaacc cccgctccga agcaggagcc 120 gacaggcagg gaacccttaa tttccctcaa atcactcttt ggcagcgacc ccttgtctca 180 ataaaagtag ggggtcagat aaaggaggct ctcttagaca caggagcaga tgatacagta 240 ttagaagaaa taaatttgcc aggaaaatgg aaaccaaaaa tgataggagg aattggaggt 300 tttatcaaag taagacagta tgaggaaata cttatagaaa tttgtggaaa aaaggctata 360 ggtacagtat tagtagggcc tacacctgtc aacataattg gaagaaatat gttgactcaa 420 cttggatgca cactaaattt tccaattagt cccattgaaa ctgtaccagt aaaattaaag 480 ccaggaatgg atggcccaaa ggttaaacaa tggccgttga cagaggagaa aataaaagca 540 ttaacagcaa tttgtgaaga aatggaaaaa gaaggaaaaa ttacaaaaat tgggcctgaa 600 aatccatata acactccagt atttgccata aaaaagaagg acagtactaa gtggagaaaa 660 ttagtagatt ttagggaact caataaaaga actcaagact tttgggaagt tcaattagga 720 ataccacacc cagcagggtt aaaaaagaaa aaatcagtga cagtactgga cgtgggggat 780 gcatattttt cagttccttt agatgaaggc ttcaggaagt atactgcatt caccatacct 840 agtataaaca atgaaacccc agggattaga tatcaatata atgtgcttcc acagggatgg 900 aaaggatcac cagcaatatt tcagagtagc atgacaaaaa tcttagagcc ctttagggca 960 caaaactcag aaatagtcat ctatcaatac atggatgact tgtatgtggg atctgactta 1020 gaaatagggc aacatagagc aaaaatagag gagttaagag aacatctatt aaggtggggg 1080 tttaccacac cagacaaaaa acatcagaaa gaacccccat ttctttggat ggggtatgaa 1140 ctccatcctg ataaatggac agtgcagccg atacagttgc cagaaaagga cagctggact 1200 gtcaatgata tacagaagtt agtgggaaaa ttaaactggg caagtcagat ttacgcaggg 1260 ataaaggtaa agcaactttg taaactcctt agggggacca aagcactaac agacatagta 1320 ccactaactg aggaagc 1337 // ID MK133159; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133159; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 1-A9 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 5e4a1f38edf6a2d351ab1539512790b8. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="1-A9" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ57997.1" FT /translation="SPEQNRAHSPTSTGLGNGGRDNPLAEAGDERQGTGQSCNFPQITL FT WQRPLVTVKIEGQLREALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYDQITI FT EICGKRAIGTVLVGPTPVNIIGRNMLVQLGCTLNFPISPITTVPVKLKPGMDGPKVKQW FT PLTEEKIKALTEICNEMEKEGKISRIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEIQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLHEDFRKYTAFTIPSINNETPGI FT RYQYNVLPQGWKGSPSIFQSSMTKILEPFRSKNPEMVIYQYMDDLYVGSDLEIGQHRAK FT IEELRAHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIKLPEKDSWTVNDIQKL FT VGKLNWASQIYAGIRVKQLCKLLRGAKALTDIVPLTREA" XX SQ Sequence 1313 BP; 503 A; 233 C; 286 G; 291 T; 0 other; tccccagagc agaacagagc ccacagcccc accagcacag gacttgggaa tgggggaaga 60 gataaccccc tcgctgaagc aggagatgaa aggcaaggaa caggccagtc ctgcaatttc 120 cctcaaatca ctctttggca acgacccctt gtcacagtaa aaatagaagg acaactaagg 180 gaagctctat tagatacagg agcagatgat acggtgttag aggacataaa tttgccagga 240 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acaatatgac 300 cagataacta tagaaatttg tgggaaaagg gccataggca cagtattagt aggacctaca 360 cctgttaaca taattggaag aaatatgctg gttcagcttg gttgtactct aaattttcca 420 attagtccta ttacaactgt accagtaaaa ctaaagccag ggatggatgg cccaaaggtt 480 aaacaatggc cattgacaga agaaaaaata aaagcattga cagaaatttg taatgaaatg 540 gaaaaggaag gaaaaatttc aagaattggg cctgaaaatc catataacac tccagtgttt 600 gctataaaga aaaaggatag cactaaatgg agaaaattag tagatttcag agaactcaat 660 aagagaacac aggacttctg ggaaattcaa ttaggaatac cacatccagc aggattaaaa 720 aagaaaaaat cagtaacagt actagatgtg ggggacgcat atttttctgt tcccttgcat 780 gaagacttca ggaaatatac tgcattcacc atacctagta taaacaatga gacaccagga 840 attaggtatc agtacaatgt acttccacag ggatggaaag gatcaccatc aatattccag 900 agtagcatga caaaaatctt agagcccttt agatcaaaaa atccagaaat ggtcatctac 960 caatacatgg atgacttgta tgtaggatct gatttagaga tagggcagca tagagcaaaa 1020 atagaggaat taagggctca tttattgaaa tggggattta ctacaccaga caaaaaacat 1080 cagaaagaac ccccatttct ttggatggga tatgaacttc atcctgacaa atggacagtc 1140 cagcctataa agctgccaga aaaagacagc tggactgtca atgatataca gaaattagta 1200 ggaaagttaa attgggcaag tcagatttat gcaggtatta gagtaaagca actatgtaaa 1260 ctccttagag gagccaaggc actgacagac atagtaccac tgactagaga agc 1313 // ID MK133160; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133160; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 1-D5 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 99b2644c5ddf37035317f608430ca0d4. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="1-D5" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ57998.1" FT /translation="SSEQTRTNSPSSRAPGDGGRDNLPSETGAEGQGTAPSLNFPQITL FT WQRPIVTVRIGGQLKEALLDTGADDTVLEDIDLPGKWKPKMIGGIGGFIKVRQFDQIVI FT EICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVALKPGMDGPKVKQW FT PLTEEKIKALTEICKEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAALKKKKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSINNETPGI FT RYQYNVLPQGWKGSPAIFQSSMTKILEPFRSQNPEMIIYQYMDDLYVGSDLEIGQHRTK FT IEKLREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKL FT VGKLNWASQIYPGIKVKQLCKLLRGAKALTDVVPLTEEA" XX SQ Sequence 1313 BP; 506 A; 235 C; 281 G; 291 T; 0 other; tcctcagagc agaccagaac caacagcccc tccagcagag ctcctgggga tgggggaaga 60 gataacctcc cctctgaaac aggagcagaa ggacagggaa cagccccctc ccttaatttc 120 cctcaaatca ctctttggca acgacccatt gtcacagtaa gaataggagg acagttaaaa 180 gaagctctat tggacacagg agcagatgat acagtattag aagacataga tttaccagga 240 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtttgat 300 cagatagtta tagaaatttg tggaaaaaag gctataggta cagtgttagt aggacctaca 360 cctgtcaaca taattggaag aaatatgttg actcagattg gctgtacttt aaattttcca 420 attagtccta ttgaaactgt accagtagca ttaaagccag gaatggatgg gccaaaggtt 480 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagaaatctg taaggagatg 540 gaaaaggaag gaaagatttc aaaaattggg cctgaaaacc catacaatac tccagtattt 600 gctataaaga aaaaagatag cactaaatgg agaaaattag tagacttcag agaactcaat 660 aaaagaaccc aggacttctg ggaagttcaa ttaggaatac cgcatccagc ggctttaaaa 720 aagaagaaat cagtaacagt actagatgtg ggggatgcat atttttcagt tcctttagat 780 gaaagtttta gaaaatacac tgcattcacc atacctagta taaacaatga gacaccagga 840 atcaggtatc agtacaatgt gcttccacag ggatggaagg gatcaccagc aatattccag 900 agtagcatga caaaaatctt agagcccttt agatcacaaa atccagaaat gattatctat 960 caatacatgg atgacttgta tgtaggatct gatttggaaa tagggcaaca cagaacaaaa 1020 atagaaaaat taagagaaca tctattgaga tggggattta ctacaccaga caaaaaacat 1080 cagaaagaac ctccatttct ttggatggga tatgaactcc atcctgacaa atggacagtc 1140 cagcctatac agctgccaga aaaggacagc tggactgtca atgatataca gaaattagtg 1200 ggaaaactaa attgggcaag tcaaatttat ccagggataa aagtaaagca actatgtaaa 1260 ctcctcaggg gagccaaagc actaacagat gtagtaccac tgacagagga agc 1313 // ID MK133161; SV 1; linear; genomic DNA; STD; VRL; 1283 BP. XX AC MK133161; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 1-H6 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1283 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1283 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 1431b2d5f72ea771d71b059378e4db98. XX FH Key Location/Qualifiers FH FT source 1..1283 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="1-H6" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1283 FT /gene="pol" FT CDS <1..>1283 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ57999.1" FT /translation="SSEQTGANSPTSRDLGDGGRDTERDPTLNFPQITLWQRPIVTVKI FT EGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYDQIHIEICGKQAIGT FT VLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVTLKPGMDGPRIKQWPLTEEKIKAL FT TEICMEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLG FT IPHPAGLKKKKSVTVLDVGDAYFSVPLDKNFRKYTAFTIPSINNETPGIRYQYNVLPQG FT WKGSPAIFQSSMTKILEPFRVKNPEIIIYQYMDDLYVGSDLEIGQHRTKVEELRAHLLS FT WGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPNKDSWTVNDIQKLVGKLNWASQI FT YAGIKVRQLCKLLRGAKALTDIVPLTEEA" XX SQ Sequence 1283 BP; 507 A; 213 C; 267 G; 296 T; 0 other; tcctcagagc aaactggagc caacagcccc accagcagag atcttgggga tgggggaaga 60 gatacagaaa gagaccccac cctcaatttc cctcaaatca ctctttggca acgacccata 120 gtcacagtaa aaatagaagg acagctaaaa gaagctttat tagatacagg agcagatgac 180 acagtattag aagatataaa tttgccagga aaatggaaac caaaaatgat agggggaatt 240 ggaggtttta tcaaagtaag acagtatgat cagatacata tagaaatttg tggaaaacag 300 gctataggta cagtattagt aggacctaca cctgtcaaca taattggaag gaacatgttg 360 actcaaattg ggtgtacttt aaattttcca attagtccta ttgagaccgt accagtaaca 420 ttaaagccag gaatggatgg cccaaggatt aaacaatggc cattgacaga agaaaaaata 480 aaagcattaa cagaaatttg tatggaaatg gaaaaggaag gaaaaatttc aaaaattggg 540 ccggagaatc catacaatac tccagtattt gctataaaga aaaaagatag cactaaatgg 600 agaaaattag tagattttag agaactcaat aaaagaactc aggacttctg ggaagttcaa 660 ttaggaatac cacatcctgc aggtttaaaa aagaaaaaat cagtaacagt actagatgtg 720 ggagatgcat atttttcggt tcctttagat aaaaacttta gaaagtatac tgcatttacc 780 atacctagta taaacaatga aacaccagga atcaggtatc aatacaatgt gcttccacag 840 ggatggaaag gatcaccagc aatattccag agtagcatga caaaaatctt agagcccttt 900 agggtaaaaa atccagaaat aattatatat caatacatgg atgatttata tgtaggatct 960 gatttagaaa tagggcagca tagaacaaaa gtagaggagt tgagagctca tctattgagt 1020 tggggattta ctacaccaga caaaaagcat cagaaagaac ctccatttct ttggatggga 1080 tatgaactcc atcctgacaa atggacagta cagcctatac aactgccaaa caaagacagc 1140 tggactgtca atgatataca gaaattagtg ggaaaactaa attgggcaag tcaaatttat 1200 gcagggatta aagtaaggca actgtgtaaa ctcctcagag gagccaaagc actaacagat 1260 atagtaccac tgactgagga agc 1283 // ID MK133162; SV 1; linear; genomic DNA; STD; VRL; 1304 BP. XX AC MK133162; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 1-H7 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1304 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1304 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; a6c206ca58edfd37c225f88f9fd1dcb0. XX FH Key Location/Qualifiers FH FT source 1..1304 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="1-H7" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1304 FT /gene="pol" FT CDS <1..>1304 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58000.1" FT /translation="PSEPTRTISPTSRELQVRGDNLCSETGVEGRGTALNLPQITLWQR FT PLVSIKVGGQIKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYDQIVIEIC FT GKKAIGSVLVGPTPVNIIGRNMLTQLGCTLNFPISSIETIPVKLKPGMDGPKVKQWPLT FT EEKIKALTEICNEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQD FT FWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQ FT YNVLPQGWKGSPAIFQCSMTKILEPFRTKNPDIVIYQYMDDLYVGSDLEIGQHRAKIEE FT LRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKESWTVNDIQKLVGK FT LNWASQIYPGIKVKQLCKLLRGTKALTDIVPLTEEA" XX SQ Sequence 1304 BP; 501 A; 236 C; 279 G; 288 T; 0 other; ccttcagagc cgaccagaac catcagcccc accagcagag agcttcaggt tcgaggagac 60 aacctttgct ccgagacagg agtcgaagga cggggaacag cccttaacct ccctcagatc 120 actctttggc aacgacccct tgtctcaata aaagtagggg gccagataaa ggaagctctc 180 ttagatacag gagcagatga tacagtatta gaagacataa atttgccagg aaaatggaag 240 ccaaaaatga taggaggaat tggaggtttt atcaaagtaa gacaatatga tcaaatagtt 300 atagaaattt gtggaaaaaa ggcaataggt tcagtattag taggacctac gcctgtcaac 360 ataattggaa gaaatatgtt gactcagctt ggatgcacac taaattttcc aattagttcc 420 attgagacta tacctgtaaa attaaagcca ggaatggatg gcccaaaagt taaacaatgg 480 ccattgacag aagagaaaat aaaagcatta acagaaatct gtaatgaaat ggaaaaggaa 540 ggaaaaatca caaaaattgg gcctgaaaat ccatacaaca ccccagtatt tgccataaaa 600 aagaaggaca gtactaagtg gagaaaatta gtagatttca gggaactcaa taaaagaact 660 caagactttt gggaagttca attaggaata ccacacccag cagggttaaa aaagaagaaa 720 tcagtgacag tgctggatgt gggggatgca tatttttcag ttcctttaga tgaagacttc 780 aggaaatata ctgcatttac catacctagt ataaacaatg aaacaccagg gattagatat 840 caatataatg tgcttccaca gggatggaaa gggtcaccag caatattcca gtgtagcatg 900 acaaaaatct tagagccctt taggacaaaa aacccagaca tagttatcta tcaatatatg 960 gatgacttgt atgtaggatc agatttagaa ataggacaac atagagccaa aatagaggaa 1020 ttgagacaac atttattgaa atggggattt accactccag acaagaaaca tcaaaaggaa 1080 cccccatttc tatggatggg gtatgaactt catcctgaca aatggacagt acagcctata 1140 caactgccag acaaggaaag ctggactgtc aatgatatac agaagttagt gggaaaatta 1200 aactgggcaa gtcagattta cccagggatc aaagtaaaac aactgtgtaa actccttagg 1260 ggaaccaaag cactaacaga catagtacca ctaactgagg aagc 1304 // ID MK133163; SV 1; linear; genomic DNA; STD; VRL; 1307 BP. XX AC MK133163; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 1-B7 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1307 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1307 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; ebe798777bdd9f72ba80368373bb7fbe. XX FH Key Location/Qualifiers FH FT source 1..1307 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="1-B7" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1307 FT /gene="pol" FT CDS <1..>1307 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58001.1" FT /translation="PSEQVRANSPTSRELRNGGRPLPEAGDEREGTGSSLCFPQITLWQ FT RPLVTVIIEGQPREALLDTGADDTVLQDINLLGKWKPKMIGGIGGFVKVRQYDQVTLEI FT CGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPRVKQWPL FT TEEKIKALTEICKEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQ FT DFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSVNNETPGIRY FT QYNVLPQGWKGSPAIFQSSMTKILEPFRSQNPEIVIYQYMDDLYVGSDLGIGQHRTKIE FT ELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVG FT KLNWASQIYPGIKVKQLCKLLRGAKALTDIVPLTKEA" XX SQ Sequence 1307 BP; 501 A; 234 C; 287 G; 285 T; 0 other; ccctcagagc aggttagagc caacagcccc accagcagag aacttcggaa tgggggaagg 60 ccccttcccg aagcaggaga tgaaagagag ggaacagggt cctccctgtg tttccctcaa 120 atcactcttt ggcaacgacc ccttgtcaca gtaataatag agggacagcc aagagaggcc 180 ctgttagata caggagcaga tgatacagta ttacaagaca taaatttgtt aggaaaatgg 240 aaaccaaaaa tgataggggg aattggaggt tttgtcaaag taagacagta tgatcaagta 300 actctagaaa tctgtggaaa aaaggctata ggtacagtat tagtaggacc tacacctgtc 360 aacataattg gaagaaatat gttgactcag attggctgta ccttaaattt tccaatcagt 420 cccattgaaa cggtaccagt gaaactaaag ccaggaatgg atggcccaag agttaaacaa 480 tggccattga cagaagaaaa aataaaagca ttaacagaaa tatgtaaaga aatggaaaag 540 gaaggaaaaa tttcaaaaat tgggccagaa aatccataca atactccaat atttgctata 600 aagaaaaaag acagcactaa atggagaaaa ttagtagatt tcagagaact taataaaaga 660 actcaagatt tttgggaagt tcaattagga ataccacatc cagcaggttt aaagaagaaa 720 aaatcagtaa cagtactgga tgtgggtgat gcatactttt cagttccttt agacaaggac 780 tttagaaagt atactgcatt caccatacct agtgtaaaca atgagacacc aggaataagg 840 tatcagtaca atgtgcttcc acaaggatgg aaaggatcac cggcaatatt tcagagtagc 900 atgacaaaaa tcttagaacc cttcaggtca cagaatccag aaatagtgat ctaccaatac 960 atggatgact tgtatgtagg atctgactta ggaatagggc agcatagaac aaaaatagag 1020 gagttgagag aacatctatt gaaatgggga tttactacac cagataaaaa acatcagaaa 1080 gaacctccat ttctttggat gggatatgaa ctccatcctg acaagtggac ggtccagcct 1140 atacaactgc cagaaaaaga cagctggact gtcaatgata tacagaaatt agtgggaaaa 1200 ctaaattggg caagccaaat ttatccaggg ataaaggtaa agcaactgtg taaactcctc 1260 aggggagcca aagcactaac agacatagtc ccgctgacta aggaagc 1307 // ID MK133164; SV 1; linear; genomic DNA; STD; VRL; 1298 BP. XX AC MK133164; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-C6 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1298 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1298 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 312dc3e94ca1fc5ea6d69f0cefaf3f34. XX FH Key Location/Qualifiers FH FT source 1..1298 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-C6" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1298 FT /gene="pol" FT CDS <1..>1298 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58002.1" FT /translation="PSEQTRANSPTSRELPVQGDNPLSEAGADRGTLNFPQITLWQRPL FT VTIKVGGQIKEALLDTGADDTVLEEMKLPGIWKPKMIGGIGGFIKVKQYEEIPIEICGK FT KAIGTVLIGPTPVNIIGRNMLTQLGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEE FT KIKALTAICEEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFW FT EVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSINNATPGIRYQYN FT VLPQGWKGSPAIFQSSMTKILEPFRTQNPDIVIYQYMDDLYVGSDLEIGQHRAKIEELR FT KHLLQWGFTTPDKKHQKEPPFLWMGYELHPDKWTIQPIQLPDKDSWTVNDIQKLVGKLN FT WASQIYTGIKVRQLCKLIRGAKALTDIIPLTKEA" XX SQ Sequence 1298 BP; 500 A; 233 C; 278 G; 287 T; 0 other; ccttcagagc agactagagc caacagcccc accagcagag agcttccagt tcaaggagac 60 aaccccctct ccgaggcagg agccgacagg ggaaccctta atttccctca aatcactctt 120 tggcagcgac cccttgtcac aataaaagta gggggacaaa taaaagaggc tctcttagat 180 acaggagcag atgatacagt attagaagaa atgaaattgc caggaatttg gaaaccaaaa 240 atgataggag gaattggagg ttttatcaaa gtaaaacagt atgaggagat acctatagaa 300 atttgtggaa aaaaggctat aggtacagta ttaataggac ctacacctgt caacataatt 360 ggaaggaata tgttgaccca acttggatgc acactaaatt ttccaattag tcctattgaa 420 actgtaccag taaaattaaa gccaggaatg gatggcccaa aggtcaaaca atggccattg 480 acagaagaga aaataaaagc tttaacagca atttgtgaag agatggaaaa ggaaggaaaa 540 attacaaaaa ttgggcctga aaatccatat aacactccag tatttgccat aaaaaagaag 600 gacagtacta agtggagaaa attagtagat ttcagggaac tcaataaaag aactcaagac 660 ttttgggaag ttcaattagg gataccacac ccagcaggat taaaaaagaa gaaatcagtg 720 acagtactgg atgtggggga tgcatatttt tcagttcctt tagatgaaag cttcaggaaa 780 tatactgcat tcaccatacc tagtataaac aatgcaacac cagggattag atatcaatat 840 aatgtgcttc cacagggatg gaaaggatca ccagcaatat ttcagagtag catgacaaaa 900 atcttagagc cctttaggac acaaaaccca gacatagtta tctatcaata tatggatgac 960 ttatatgtag gatctgactt agaaataggg caacatagag caaaaataga ggaattaagg 1020 aagcatctat tgcaatgggg atttaccaca ccagataaga aacatcagaa agaacctcca 1080 tttctttgga tggggtatga actccatcct gacaaatgga caatacagcc tatacagctg 1140 ccagataagg acagctggac tgtcaatgat atacagaagt tagtgggaaa attaaactgg 1200 gcaagtcaga tttacacagg gatcaaggta aggcaactgt gtaaactcat taggggagct 1260 aaagcactaa cagacataat accactgact aaagaagc 1298 // ID MK133165; SV 1; linear; genomic DNA; STD; VRL; 1301 BP. XX AC MK133165; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-B4 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1301 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1301 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 546249614a33ec00a5d4f381be8a1c1e. XX FH Key Location/Qualifiers FH FT source 1..1301 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-B4" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1301 FT /gene="pol" FT CDS <1..>1301 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58003.1" FT /translation="PSEQTRANSPTSRELQVRGDNSLPEAGAERQGTLNFPQITLWQRP FT LVTIKIGGQLKEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYDQIPIEICG FT KKAIGTVLVGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTE FT EKIKALTAICDEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDF FT WEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEGFRKYTAFTIPSINNETPGIRYQY FT NVLPQGWKGSPAIFQNSMTKILEPFRAQNPDIVIYQYMDDLYVGSDLEIGQHRAKIEEL FT REHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIKLPDKESWTVNDIQKLVGKL FT NWASQIYPGIKVKQLCKLLRGAKTLTDIVPLTEEA" XX SQ Sequence 1301 BP; 502 A; 238 C; 281 G; 280 T; 0 other; ccttcagagc agaccagagc caacagcccc accagcagag agcttcaggt tcgaggagac 60 aactccctcc ccgaagcagg agcagaaaga cagggaaccc ttaacttccc tcaaatcact 120 ctttggcaac gaccccttgt cacaataaaa atagggggac agctaaaaga ggctctctta 180 gacacaggag cagatgatac agtattagaa gaaataaatt tgccaggaaa atggaaacca 240 aaaatgatag gaggaattgg gggttttatt aaagtaagac agtatgatca aatacctata 300 gaaatttgtg gaaaaaaggc tataggtaca gtattagtgg gacctacacc tgtcaacata 360 attggaagaa atttgttgac tcagcttggg tgcacactaa attttccaat tagtcccatt 420 gaaactgtac cagtaaaatt aaaaccaggg atggatggcc caaaagtcaa acaatggcca 480 ttgacagaag aaaaaataaa ggcattaaca gcaatttgtg atgaaatgga aaaggaagga 540 aaaatttcaa aaattgggcc tgaaaaccca tataacactc caatatttgc tataaaaaag 600 aaggacagta ctaagtggag aaaattagta gattttaggg aactcaataa aagaactcaa 660 gacttttggg aggttcaatt agggatacca cacccagcag ggttaaaaaa gaaaaaatca 720 gtgacagtac tggatgtggg ggatgcatat ttctcagtgc ctttagacga aggcttcaga 780 aaatatactg cattcaccat acccagtata aacaatgaaa caccagggat acggtatcaa 840 tataatgtac ttccacaggg atggaaagga tcaccagcaa tattccagaa tagcatgaca 900 aaaatcttag agccctttag ggcacaaaac ccagacatag ttatctatca atacatggat 960 gacttgtatg tagggtctga tttagagata gggcaacata gagcaaaaat agaggagtta 1020 agagaacatc tattgaggtg ggggtttacc acaccagaca agaaacatca gaaagaacct 1080 ccatttcttt ggatggggta tgaactccat ccagacaagt ggacagtaca gcctataaag 1140 ctgccagaca aagaaagctg gactgtcaat gatatacaga aattagtggg aaaactaaac 1200 tgggcaagtc aaatttatcc agggattaaa gtaaaacaat tatgtaaact cctcagggga 1260 gccaaaacac taacagacat agtaccattg actgaggaag c 1301 // ID MK133166; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133166; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-A6 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 082ff26693a87dcafd05172053bd0954. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-A6" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58004.1" FT /translation="SPEQTRANSPTSRDDGDGGRDSLPSEAGAEGQGTGPTFSFPQITL FT WQRPVVTVKVGGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVKQYDQILI FT EICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQW FT PLTEEKIKALTEICTDMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKNKSVTVLDVGDAYFSVPLDEGFRKYTAFTIPSTNNETPGI FT RYQYNVLPQGWKGSPAIFQSTMTKILEPFRAQNPEIIIYQYMDDLYVGSDLEIGQHRTK FT VEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTIQPIVLPEKESWTVNDIQKL FT VGKLNWASQIYAGIRVKQLCKLLRGAQALTDVVTLTEEA" XX SQ Sequence 1313 BP; 489 A; 242 C; 300 G; 282 T; 0 other; tccccagagc agaccagagc caacagcccc accagcagag atgatgggga tgggggaaga 60 gacagcctcc cctccgaagc aggagcagag ggacagggaa caggccccac ctttagtttc 120 cctcaaatca ctctttggca acgaccagtt gtcacagtaa aagtaggggg acagctaaaa 180 gaagctctat tagatacagg agcagatgat acagtattag aagacataaa tttgccagga 240 aaatggaaac caaaaatgat agggggaatt ggaggcttta tcaaggtaaa acagtatgat 300 cagatactta tagaaatttg tgggaaaaag gctataggta cagtgttagt aggacctaca 360 cctgtcaaca taattggaag aaatatgttg acccagatcg gctgtacatt aaatttccca 420 attagtccta ttgagactgt accagtaaaa ttaaagccag gaatggatgg cccaaaggtt 480 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagaaatttg tacagatatg 540 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt 600 gctataaaga aaaaagacag cactaaatgg agaaaattag tagatttcag agaactcaat 660 aaaagaactc aggacttctg ggaagttcaa ttaggaatac cgcatccagc gggtttaaaa 720 aagaacaaat cagtgacagt actggatgtg ggggacgcat atttttcagt tcctttagat 780 gagggcttca gaaagtacac tgcgttcacc atacctagta caaacaatga gacaccagga 840 atcaggtatc agtacaatgt gcttccacag ggatggaaag gatcaccggc aatattccag 900 agtaccatga caaaaatctt agaacccttt agagcacaga atccagaaat aattatctat 960 caatacatgg atgacttgta tgtaggatct gatttagaaa tagggcagca tagaacaaaa 1020 gtagaagaat taagagccca cttattgagc tggggattta ctacaccaga caaaaagcat 1080 cagaaagaac ctccattcct ttggatgggc tatgagctcc atccggacaa gtggacaatc 1140 cagcctatag tgctgccaga aaaagaaagc tggactgtca atgatataca gaaattagta 1200 gggaaactaa attgggccag tcagatttat gcagggatta gggtaaagca actgtgtaaa 1260 ctcctcagag gagcccaagc actaacagat gtagtaacac tgactgagga ggc 1313 // ID MK133167; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133167; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-D4 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 130776a3a3e91d7c30f147d887365f31. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-D4" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58005.1" FT /translation="SSEQTRANSPTSRALWDGGRDNLPSEAGAERQGTEPTYSFPQITL FT WQRPLVTVKIGGQPREALLDTGADDTVFEEINLPGKWKPRMIGGIGGFIKVKQYDQIVL FT EICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQW FT PLTEEKIKALTEICEEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDQEFRKYTAFTIPSINNETPGI FT RYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPEIVIYQYMDDLYVGSDLEIGQHRAK FT IEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPNKESWTVNDIQKL FT VGKLNWASQIYPGIKVKQLCKLLRGAKALTEVVTLTEEA" XX SQ Sequence 1313 BP; 506 A; 230 C; 288 G; 289 T; 0 other; tcctcagagc agaccagagc caacagcccc accagcagag ctctttggga tgggggacga 60 gataacctcc cctccgaagc aggagcagaa aggcagggaa cagagcccac ctatagtttc 120 cctcaaatca ctctttggca acgacctctt gtcacagtaa agataggggg acagccaaga 180 gaagctctat tagatacagg agctgatgat acagtatttg aagaaataaa tttgccagga 240 aaatggaaac caagaatgat agggggaatt ggaggtttca tcaaagtaaa acagtatgat 300 caaatagttc tagaaatttg tgggaaaaag gctataggta cagtattagt aggacctaca 360 cctgtcaaca taattggaag aaatatgttg acccagattg gttgcacttt aaattttcca 420 attagtccta ttgagactgt accagtaaaa ttaaagccag gaatggatgg cccaaaggtc 480 aaacagtggc cattgacaga agagaaaata aaagcattaa cagaaatttg tgaagaaatg 540 gagaaggaag gaaaaattac aaaaattggg cctgaaaatc catataatac tccagtattt 600 gccataaaaa agaaggacag tactaagtgg agaaaattag tagattttag ggaactcaat 660 aaaagaactc aagacttttg ggaagttcaa ttagggatac cacacccagc agggttaaag 720 aagaaaaaat cagtaacagt actggatgtg ggggatgcat atttttcagt tcctttagat 780 caagaattca ggaaatatac tgcattcacc atacccagta taaacaatga aacaccaggg 840 attagatatc aatataatgt gcttccacag ggatggaaag gatcaccagc aatattccag 900 agtagcatga caaaaatctt agagcccttt agagcaaaaa acccagaaat agttatctat 960 caatatatgg atgacttgta tgtaggatca gacttagaaa tagggcaaca tagagcaaaa 1020 atagaagaat taagagaaca tctattgagg tggggattta ccacaccaga caagaaacat 1080 cagaaagaac ctccatttct ttggatgggg tatgaactcc atcctgacaa atggacagtc 1140 cagcctatac agctaccaaa taaggaaagc tggactgtca atgacataca gaaattagta 1200 ggaaaactaa attgggcaag tcaaatttat ccagggatta aagtaaagca actatgtaaa 1260 ctcctcaggg gagccaaagc actaacagag gtagtaacac tgactgagga agc 1313 // ID MK133168; SV 1; linear; genomic DNA; STD; VRL; 1322 BP. XX AC MK133168; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-H9 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1322 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1322 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; a9dbd39276c697b05447226c469d6ec2. XX FH Key Location/Qualifiers FH FT source 1..1322 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-H9" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1322 FT /gene="pol" FT CDS <1..>1322 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58006.1" FT /translation="PSEQTSANSPTSRELRVRGNDNGGDNPLPEAGVKGQGIVSFDFPQ FT ITLWQRPLVHIKVGGQLKEALLDTGADDTVLEEIDLPGRWRPKMIGGIGGFIKVRQYDQ FT VPIEICGKKAIGAVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKI FT KQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFREL FT NKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDENFRKYTAFTIPSINNET FT PGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPELIIYQYMDDLYVGSDLEIGQH FT RAKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIKLPEKESWTVNDI FT QKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDIVPLTAEA" XX SQ Sequence 1322 BP; 510 A; 227 C; 281 G; 304 T; 0 other; ccttcagagc agacctcagc caacagcccc accagcagag agcttcgggt tcggggaaac 60 gataacggag gagacaaccc cctccccgaa gcaggagtca aaggacaagg aattgtatcc 120 tttgacttcc ctcaaatcac tctttggcag cgacccttag ttcatataaa agtaggaggg 180 cagctgaagg aggctctatt agatacagga gcagatgata cagtactaga agaaatagat 240 ttaccaggaa gatggagacc aaaaatgata gggggaattg gaggttttat caaagtaaga 300 caatatgatc aagtacctat agaaatttgt gggaaaaaag ctataggtgc agtattagta 360 ggacctacac ctgtcaacat aattggacga aacatgttga cccagattgg ttgtacttta 420 aattttccaa taagtcctat tgaaactgta ccggtaaaat taaaaccagg aatggatggc 480 ccaaagatta aacaatggcc attgacagaa gaaaaaataa aagcattaac agaaatttgt 540 acagaaatgg aaaaggaagg aaaaatttca aaaattgggc ctgaaaatcc atataatact 600 ccaatatttg ccataaagaa aaaagacagt actaaatgga gaaaattagt agattttaga 660 gaacttaata aaagaactca agatttttgg gaagttcagt taggaatacc acatcctgct 720 ggcttaaaga agaaaaaatc agtaacagta ctagatgtgg gggatgcata cttttcagtt 780 cccttagatg aaaatttcag aaagtatact gcattcacca tacctagtat taataatgag 840 acaccagggg ttagatatca gtacaatgtg cttccacagg gatggaaagg atcaccagca 900 atattccaaa gtagtatgac aaaaatctta gaacccttta gagcaaaaaa tccagaatta 960 attatctatc agtacatgga tgatttatat gtaggatctg acttagaaat agggcagcat 1020 agagcaaaaa tagaggaatt aagagaacat ctattgaggt ggggatttac cacaccagac 1080 aaaaagcatc agaaagaacc cccatttctt tggatggggt atgaactcca tcctgataaa 1140 tggacagtac agcctataaa actgccagaa aaggagagct ggactgtcaa tgacatacag 1200 aagttagtgg gaaaactaaa ttgggcaagt caaatttatc caggaattaa agtaaagcaa 1260 ttatgtaaac tccttagggg agccaaagca ctgacagaca tagtaccact aactgcagaa 1320 gc 1322 // ID MK133169; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133169; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-E8 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 7e2ef99b049ff4446a20b868617610a1. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-E8" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58007.1" FT /translation="SSEQTRANSPTSRARGDGGRDSPSSETGAEGQGTGPTLSFPQITL FT WQRPLVTVRIGGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYDQILI FT EICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIQTVPVKLKPGMDGPRVKQW FT PLTEEKIKALTEICAEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPGGLKKNKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSTNNETPGV FT RYQYNVLPQGWKGSPAIFQHSMTKILEPFRSKNPEIIIYQYVDDLYVGSDLEIGQHRAK FT IEELRAHLLSWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIKLPEKESWTVNDIQKL FT VGKLNWASQIYPGIKVKQLCKLLRGTKALTEVVTLTEEA" XX SQ Sequence 1313 BP; 494 A; 235 C; 295 G; 289 T; 0 other; tcctcagagc agaccagagc caacagcccc accagcagag ctcgtgggga tgggggaagg 60 gatagcccct cctccgaaac aggagcagaa ggacagggaa cagggcccac ccttagtttc 120 cctcaaatca ctctttggca acgacccctt gtcacagtaa gaataggggg acagctaaaa 180 gaagctctat tagacacagg agcagatgat acagtattag aagatataaa tttgccagga 240 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 300 cagatactta tagaaatttg tggaaaaaag gctataggta cagtattagt aggacccaca 360 cctgtcaaca taattggaag aaatatgttg acccagattg gttgtacttt aaattttcca 420 attagtccta ttcagactgt accagtaaaa ttaaagccag gaatggatgg cccaagggtt 480 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagaaatttg tgcagaaatg 540 gagaaggaag gaaaaatttc aaaaataggg cctgaaaatc catacaatac tccaatattt 600 gctataaaga aaaaggatag cactaaatgg aggaaattag tagatttcag agagctcaat 660 aaaagaactc aggatttctg ggaagtccaa ttaggaatac ctcatccagg aggtttaaaa 720 aagaacaaat cagtaacagt actagatgtg ggggatgcat atttctcagt tcctttagat 780 gaagacttta gaaagtacac tgcgttcacc atacctagta caaacaatga gacaccagga 840 gtcaggtatc agtacaacgt gctcccacag ggatggaaag gatcaccagc aatattccag 900 catagcatga caaaaatttt agagcccttt agatcaaaaa atccagaaat aattatctat 960 caatacgtgg atgacttgta tgtaggatct gatttagaaa taggacagca cagagcaaaa 1020 atagaggagc tgagagctca tctattgagc tgggggttaa ctacaccaga caaaaagcat 1080 cagaaggaac ctccctttct ttggatggga tatgaacttc atcctgacaa atggacagtt 1140 caacctataa agttgccgga aaaggaaagc tggactgtca atgatataca gaaattagtg 1200 ggaaaactaa attgggcaag tcagatttat ccagggatta aagtaaagca actgtgtaaa 1260 ctcctcaggg gaaccaaagc actaacagaa gtagtgacac tgactgagga agc 1313 // ID MK133170; SV 1; linear; genomic DNA; STD; VRL; 1316 BP. XX AC MK133170; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-C3 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1316 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1316 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 9b39b4508a91935ad956b14d62ab6b16. XX FH Key Location/Qualifiers FH FT source 1..1316 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-C3" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1316 FT /gene="pol" FT CDS <1..>1316 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58008.1" FT /translation="SPEQTRANSPTSRALGDGGRDSLPSEAGAERQGTGSPTFSFPQIT FT LWQRPLVPVKIGGQLKEALLDTGADDTVFEEIDLQGKWKPKMIGGIGGFIKVKQYDQIL FT IEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQ FT WPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPIFAIRKKDSTKWRKLVDFRELNK FT RTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKSFRKYTAFTIPSINNETPG FT IRYQYNVLPQGWKGSPAIFQSSMTRILEPFRIKNPEVIIYQYMDDLYVGSDLEIGQHRT FT KIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIILPEKESWTVNDIQK FT LVGKLNWASQIYAGIKVKQLCKLLRGAKALTDVVTLTEEA" XX SQ Sequence 1316 BP; 502 A; 229 C; 292 G; 293 T; 0 other; tccccagagc agaccagagc caacagcccc accagcagag ctcttgggga tgggggaagg 60 gatagcctcc cctccgaagc aggagcagaa agacaaggaa caggcagccc cacctttagt 120 ttccctcaaa tcactctttg gcaacgaccc cttgtcccag taaaaatagg gggacagcta 180 aaagaagctc tattggatac aggagcagat gatacagtgt ttgaagaaat agatttgcaa 240 ggaaaatgga aaccaaaaat gataggagga attggaggtt tcatcaaggt aaaacaatat 300 gatcagatac ttatagaaat ttgtggaaaa aaggctatag gcacagtatt agtaggacct 360 acacctgtca acataattgg aagaaatatg ttgacccaga ttggttgtac tttaaatttt 420 ccaattagtc ctattgagac tgtaccagtg aaattaaagc caggaatgga tggcccaaag 480 gttaaacaat ggccattgac agaagagaaa ataaaagcat taacagaaat ttgtacagag 540 atggaaaagg aaggaaaaat ttcaaaaatt gggcctgaga atccatacaa tactccaata 600 tttgctataa ggaaaaagga cagcactaaa tggagaaaat tagtagattt cagagagctc 660 aacaaaagaa cacaagactt ttgggaagtt caattaggaa taccacatcc agcgggccta 720 aaaaagaaaa aatcagtaac agtactggat gtgggggatg catatttttc agttccttta 780 gataaaagct ttagaaagta taccgcgttc accataccta gtataaacaa tgagacacca 840 ggaatcaggt atcagtacaa tgtgcttcca cagggatgga aaggatcacc agcaatattt 900 cagagtagta tgacaagaat cttagagccc tttagaataa agaatccaga agtaattatc 960 tatcaataca tggatgactt gtatgtagga tctgatttag aaatagggca gcatagaaca 1020 aaaatagaag agttaagagc tcatctgttg agctggggat ttactacacc agacaaaaaa 1080 catcagaaag aacctccatt cctgtggatg ggatatgagc tccatcctga caagtggaca 1140 gtccagccta taatattgcc agaaaaagaa agctggactg tcaatgatat acagaaacta 1200 gtaggaaaat taaattgggc aagtcaaata tatgcaggga ttaaggtaaa gcaattgtgt 1260 aaactcctca ggggagccaa agcactaaca gatgtagtaa cattgactga agaagc 1316 // ID MK133171; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133171; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-H5 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 39fd74c145939e35efce44af7b644962. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-H5" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58009.1" FT /translation="SSEQDRANSTTSREPWDGGREAPLSEAGTEGQGAISFSNFPQITL FT WQRPLVTVKIGGQLREALLDTGADDTVLEEIDLPGRWKPKMIGGIGGFIKVRQYDQILI FT EICGKKAIGTVLVGPTPVNIIGRNILTQIGCTLNFPISTIETVPVKLKPGMDGPKVKQW FT PLTEEKIKALTEICAEMEREGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKRSVSVLDVGDAYFSVPLDEGFRKYTAFTIPSINNETPGI FT RYQYNVLPQGWKGSPAIFQSSMTKILEPFRMKNPEIVIYQYMDDLYVGSDLDIGQHRAK FT IEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKL FT VGKLNWASQIYAGIKIKQLCKLLRGAKALTDVVILTEEA" XX SQ Sequence 1313 BP; 501 A; 227 C; 292 G; 293 T; 0 other; tcctcagagc aggacagagc caacagcacc accagcagag agccttggga tgggggaaga 60 gaggcccccc tctctgaagc aggaaccgag ggacaaggag ctatatcctt ctctaacttc 120 cctcaaatca ctctttggca acgaccccta gtcacagtaa aaataggggg acagctaaga 180 gaagccctac tagatacagg agcagatgat acagtattag aagaaataga tttaccagga 240 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acaatatgat 300 cagatactta tagaaatttg tggaaaaaag gctataggta cagtattagt aggacctaca 360 cctgtcaaca taattgggag gaatatattg actcaaattg gttgtacttt aaattttcca 420 attagtacta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg gccaaaggtt 480 aaacaatggc cattaacaga agaaaaaata aaagcattaa cagaaatttg tgcagagatg 540 gaaagggaag gaaaaatttc aaaaattggg cctgaaaatc catacaacac tccagtgttt 600 gctataaaga aaaaggacag tactaaatgg agaaaattag tagattttag agagctcaat 660 aaaagaactc aagacttctg ggaagtccaa ttagggatac ctcatcctgc agggttaaaa 720 aagaagagat cagtgtcagt actagatgtg ggagatgcat atttttcagt ccctctagat 780 gaaggcttta gaaagtatac tgcattcact atacctagta taaacaatga gacaccagga 840 attaggtatc agtacaatgt gctgccacag ggatggaaag gatcaccggc aatatttcag 900 agtagcatga caaaaatcct agagcccttt agaatgaaaa atccggaaat agtgatctac 960 caatacatgg atgatttata tgtaggatct gacttagaca taggacagca tagagcaaaa 1020 atagaggaat taagagaaca tctcctgaag tggggattta ccacaccaga caaaaaacat 1080 cagaaagaac ccccatttct ttggatggga tatgaactcc atcctgataa atggacagtc 1140 cagcctatac aactgccaga gaaagatagc tggactgtca atgatataca gaaattagtg 1200 ggaaaactaa attgggcaag tcagatttat gcaggaatca aaataaagca actatgtaaa 1260 ctcctcaggg gagccaaagc gctaacagat gtagtaatac tgactgagga agc 1313 // ID MK133172; SV 1; linear; genomic DNA; STD; VRL; 1319 BP. XX AC MK133172; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-G9 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1319 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1319 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 3a2b9fbfaec309d473daca14027a7532. XX FH Key Location/Qualifiers FH FT source 1..1319 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-G9" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1319 FT /gene="pol" FT CDS <1..>1319 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58010.1" FT /translation="PSEQTRTISPSSAISPTSRELQVRGDNLPSEAGAERQGTFNFPQI FT TLWQRPMVTIKVEGQLKEALLDTGADDTVLEEIKLSGNWKPKMIGGIGGFIKVRQYDQV FT VIEISGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNFPISPIETVPVKLKPGMDGPRVK FT QWPLTEEKIKALTAICEEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELN FT KRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSINNETP FT GIRYQYNVLPQGWKGSPSIFQSSMIKILEPFRAQNPEIVIYQYMDDLYVGSDLEIGQHR FT AKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKESWTVNDIQ FT KLVGKLNWASQIYPGIKVRQLCKLLRGAKALTDIVTLTEEA" XX SQ Sequence 1319 BP; 505 A; 236 C; 290 G; 288 T; 0 other; ccttcagagc agaccagaac catcagcccc tccagcgcca tcagccccac cagcagagag 60 cttcaggttc ggggagacaa cctcccctcc gaagcaggag ctgaaagaca gggaaccttt 120 aacttccctc aaatcactct ttggcagcga cccatggtca caataaaagt agagggacag 180 ctaaaggagg ctcttttaga cacaggagcc gatgatacag tattagaaga aataaaatta 240 tcaggaaatt ggaagccaaa aatgataggg ggaattggag gttttatcaa agtaagacag 300 tatgatcaag tagttataga aattagtgga aaaaaggcta taggtacagt actagtagga 360 ccaacacctg tcaacataat tggaagaaat atgttgactc agcttggatg tacactaaat 420 tttccaatta gtccaattga aactgtacca gtaaaattaa agccaggaat ggacggccca 480 agggtcaaac aatggccatt aacagaagaa aaaataaaag cattaacagc aatttgtgaa 540 gagatggaga aggaaggaaa aattacaaaa attgggcctg aaaatccata taacactcca 600 gtatttgcca taaaaaagaa ggacagtact aagtggagga aattagtaga tttcagggaa 660 ctaaataaaa gaactcaaga cttttgggag gttcaattag ggataccaca cccagcaggg 720 ttaaaaaaga agaaatcagt gacagtacta gatgtagggg atgcatattt ttcagttcct 780 ttagatgaaa gcttcaggaa atatactgca ttcaccatac ctagtataaa caatgaaaca 840 ccagggatta gatatcagta taatgtactt ccacagggat ggaaaggatc accatcaata 900 tttcagagta gcatgataaa aatcttagag ccctttaggg cacaaaaccc agagatagtt 960 atctatcaat atatggatga cttgtatgta ggatctgact tagaaatagg gcaacacaga 1020 gcaaaaatag aggagttaag agaacatctg ttgaagtggg gatttaccac accagacaag 1080 aaacatcaaa aagaacctcc atttctttgg atggggtatg aactccatcc tgacaaatgg 1140 acagtacagc ctatagtgct gccagaaaag gagagctgga ctgtcaatga tatacagaag 1200 ttagtgggaa aattaaactg ggcaagtcaa atttacccag ggattaaagt aagacaacta 1260 tgtaaactcc ttaggggagc taaagcacta acagacatag taacactgac tgaagaagc 1319 // ID MK133173; SV 1; linear; genomic DNA; STD; VRL; 1298 BP. XX AC MK133173; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-H4 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1298 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1298 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 74c9cea4d3e990c378bcf00052c2146e. XX FH Key Location/Qualifiers FH FT source 1..1298 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-H4" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1298 FT /gene="pol" FT CDS <1..>1298 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58011.1" FT /translation="SSEQARTNSPTSGELRVRRRDSPCPEAGAEGAISLPQITLWQRPL FT VTVKIGGQLIEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYDQILIEIHGK FT KAIGTVLVGPTPINIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEE FT KIIALTEICTEMEKEGKITRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFW FT EVQLGIPHPAGLKKKRSVTVLDVGDAYFSVPLDESFRKYTAFTIPSVNNETPGIRYQYN FT VLPQGWKGSPAIFQSSMTKILEPFRKKNPEMVIYQYMDDLYVGSDLEIGQHRAKIEELR FT DHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKESWTVNDIQKLVGKLN FT WASQIYSGIKIKQLCKLIRGTKALTEIVPLTAEA" XX SQ Sequence 1298 BP; 500 A; 222 C; 284 G; 292 T; 0 other; tcttcagagc aggccagaac caacagcccc accagcggag agcttcgggt tcggagaaga 60 gatagcccct gccccgaagc aggagcagaa ggagccatat ccctccctca aatcactctt 120 tggcagcgac ccttagtcac agtaaaaata gggggacagc tgatagaagc tctattagac 180 acaggagcag atgatacagt gttagaagaa ataaatttac cagggaaatg gaaacctaaa 240 atgatagggg gaattggagg ttttatcaaa gtaagacagt atgatcaaat acttatagaa 300 attcatggga aaaaggctat agggacagta ttagtaggac ctacacctat caacataatt 360 gggagaaata tgttgactca gattggttgt actttaaatt ttccaattag tcctattgaa 420 actgtaccag taaaattaaa gccagggatg gatggcccaa aggttaaaca atggccattg 480 acagaagaga aaataatagc attaacagaa atttgtacag aaatggaaaa ggaaggaaag 540 atcacaagaa ttgggcctga aaatccatac aacactccaa tatttgccat aaagaaaaag 600 gacagtacta aatggagaaa attagtagat tttagagaac ttaataaaag aactcaagac 660 ttctgggagg tccaattagg aatacctcat cccgcggggt taaaaaagaa aagatcagta 720 acagtactag atgtggggga tgcatatttt tcagtcccct tagatgaaag ctttagaaaa 780 tatacagcat tcactatacc tagtgtaaat aatgagacac cagggattag atatcagtac 840 aatgtgcttc cacagggatg gaaaggatca ccagcaatat ttcagagtag catgacaaaa 900 atcttagagc cctttagaaa gaaaaatcca gaaatggtga tttaccaata catggatgat 960 ttatatgtag gatctgactt agaaatagga caacatagag caaaaataga ggagttaaga 1020 gatcatttat tgaaatgggg atttaccaca ccagataaaa aacatcagaa agaacctcca 1080 ttcctttgga tgggatatga gctccatcct gacaaatgga cggtacaacc tatacagctg 1140 ccagacaagg aaagctggac ggtcaatgat atacaaaagt tagtgggaaa actaaattgg 1200 gcaagtcaga tttattcagg aattaaaata aagcaactat gtaaactcat tagggggacc 1260 aaagcactaa cagaaattgt accactgact gcagaggc 1298 // ID MK133174; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133174; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-A9 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 02b74fab1bca149905d92164a2ecfb1a. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-A9" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58012.1" FT /translation="SSEETGANSPTSRDLWDGGRDSLPSEAGAEGQGTNPTLSFPQITL FT WQRPIVTVRIEGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVKQYDQIVI FT EICGKKAIGTVLVGPTPVNIIERNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKIKQW FT PLTEEKIKALTEICLEMEKEGKISKIGPDNPYNTPIFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDIGDAYFSVPLDENFRQYTAFTIPSTNNETPGI FT RYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPEIIIYQYMDDLYVGSDLEIEQHRAK FT IKELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKEDWTVNDIQKL FT VGKLNWASQIYPGIKVKQLCKLLRGAKALTDIVPLTEEA" XX SQ Sequence 1313 BP; 509 A; 233 C; 277 G; 294 T; 0 other; tcctcagaag agactggagc caacagcccc accagcagag atctttggga tgggggaaga 60 gatagtctcc cctccgaagc aggagcagaa ggacagggaa ccaaccccac ccttagcttc 120 cctcaaatca ctctttggca acgaccaatt gtcacagtaa gaatagaggg acagctaaaa 180 gaagctctat tagatacagg agcagatgat acagtattag aagacataaa tttgccagga 240 aaatggaaac caaaaatgat agggggaatt ggaggtttca tcaaagtaaa acagtatgat 300 cagatagtta tagaaatttg tggaaaaaag gctataggta cagtattagt aggacccaca 360 cctgtcaaca taattgaaag aaatatgttg actcagattg gctgtacttt aaatttccca 420 attagtccta ttgaaactgt gccagtaaaa ttaaagccag gaatggatgg cccaaagatt 480 aaacaatggc cattgacaga ggaaaaaata aaagcattaa cagaaatttg cttagagatg 540 gaaaaggaag gaaaaatttc aaaaattggg cctgacaacc catacaatac tccaatattt 600 gctataaaga aaaaagacag cactaaatgg agaaaattag tagatttcag ggagctcaat 660 aaaagaactc aagacttttg ggaagttcaa ttagggatac cgcatccagc gggcctaaaa 720 aagaaaaaat cagtaacagt actagatata ggggacgcat atttttcagt tcctttagat 780 gaaaacttta gacagtatac tgcgttcacc atacctagta caaacaatga gacaccagga 840 atcagatatc aatacaatgt gcttccccag ggatggaaag gatcaccagc aatatttcag 900 agtagcatga caaaaatctt agagcccttt agagcaaaaa atccggaaat aattatctat 960 caatacatgg atgatttgta tgtaggatct gatttggaaa tagaacagca tagagcaaaa 1020 ataaaagagt tgagagctca tctattgagc tgggggttta ctacaccaga caaaaaacat 1080 cagaaagaac ctccatttct ttggatggga tatgagctcc atcctgacaa atggacagtc 1140 cagcctatac aactgccaga aaaagaagac tggactgtca atgatataca aaaattagtg 1200 ggaaaactga attgggcaag tcaaatttat ccagggatta aagtaaagca attatgtaaa 1260 ctcctcaggg gagccaaagc attaacagat atagtaccgc tgactgagga agc 1313 // ID MK133175; SV 1; linear; genomic DNA; STD; VRL; 1295 BP. XX AC MK133175; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-F3 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1295 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1295 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 4843f9068714f9f0594c3417d722bdbc. XX FH Key Location/Qualifiers FH FT source 1..1295 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-F3" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1295 FT /gene="pol" FT CDS <1..>1295 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58013.1" FT /translation="SPEQTGANSPTSRTLGDGGRDSLPSETGDPTFSFPQITLWQRPIV FT TVRIEGQLRDALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVKQYDQIHIEICGQK FT AIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVTLKPGMDGPKVKQWPLTEEK FT IKALTEICTDMEKEGKISRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWE FT VQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLYEEFRKYTAFTIPSTNNETPGIRYQYNV FT LPQGWKGSPAIFQSSMTKILEPFRAKNPEIIIYQYMDDLYVGSDLEIGQHRAKIEELRA FT HLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKESWTVNDIQKLVGKLNW FT ASQIYAGIKVKQLCRLIRGAKALTDIVTMTEEA" XX SQ Sequence 1295 BP; 496 A; 231 C; 279 G; 289 T; 0 other; tccccagagc agaccggagc caacagcccc accagcagaa ctcttgggga tgggggaaga 60 gacagcctcc cctccgaaac aggagacccc acctttagtt tccctcaaat cactctttgg 120 caacgaccta ttgtcacagt aagaatagag ggacaactaa gagatgctct gttagataca 180 ggagcagatg atacagtatt ggaagacata aatttgccag gaaaatggaa accaaaaatg 240 atagggggaa ttggaggatt catcaaggta aaacagtatg atcagataca tatagaaatt 300 tgtggacaaa aggctatagg tacagtatta gtaggaccta cacctgtcaa tataattgga 360 agaaatatgt tgacccagat tggttgtact ttaaatttcc caattagtcc tattgagact 420 gtaccagtaa cattaaagcc aggaatggat ggcccaaagg ttaaacaatg gccattgaca 480 gaagaaaaaa taaaagcatt aacagaaatt tgcacagata tggaaaagga aggaaaaatt 540 tcaagaattg ggcctgaaaa tccatacaat actccaatat ttgctataaa gaaaaaagac 600 agcactaaat ggaggaaact agtagatttc agagagctca ataaaagaac acaagacttt 660 tgggaagttc aattaggaat accacatcca gcaggtctaa aaaagaaaaa atcagtaaca 720 gtactagatg tgggggacgc atatttttca gtccctttat atgaggaatt tagaaaatat 780 actgcattta ccatacctag tacaaacaat gagacaccag gaattaggta tcagtacaat 840 gtgctgccac agggatggaa aggctcacca gcaatattcc agagtagcat gacaaaaatc 900 ttagagccct ttagagcaaa aaatccagaa ataattatct atcaatatat ggatgacttg 960 tacgtaggat ctgatttaga aatagggcag cacagagcaa aaatagaaga attgagagct 1020 catctattga gctggggatt tactacacca gacaaaaagc atcagaaaga acctccattc 1080 ctttggatgg gatatgagct ccatcctgac aagtggacag tccagcctat acagctgcca 1140 gacaaagaaa gttggactgt caatgatata cagaagttag taggaaaact aaattgggca 1200 agtcaaattt atgcagggat taaagtaaag cagttgtgta gactcatcag gggagccaaa 1260 gcactaacag atatagtaac aatgactgag gaagc 1295 // ID MK133176; SV 1; linear; genomic DNA; STD; VRL; 1310 BP. XX AC MK133176; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-D6 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 2e4bcf34bfa202201eb1dff26341f177. XX FH Key Location/Qualifiers FH FT source 1..1310 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-D6" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1310 FT /gene="pol" FT CDS <1..>1310 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58014.1" FT /translation="PSEQTRANSPTSRDLRDEGRDSLPSEAGAERQGRPTFNFPQITLW FT QRPLVTVKIGGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVKQYDQILIE FT ICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIDTVPVKLKPGMDGPKVKQWP FT LTEEKIKALTEICTEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRT FT QDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSTNNETPGIR FT YQYNVLPQGWKGSPAIFQSSMTKILEPFRLKNPEMIIYQYMDDLYVGSDLEIGQHRTKI FT EELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIKLPEKESWTVNDIQKLV FT GKLNWASQIYPGIKVKQLCKLLRGAKALTDIVPLTEEA" XX SQ Sequence 1310 BP; 501 A; 233 C; 282 G; 294 T; 0 other; ccctcagaac agactagagc caacagcccc accagcagag atcttaggga tgagggaagg 60 gatagtctcc cctccgaagc aggagcagag agacagggac gacccacctt caatttccct 120 caaatcactc tttggcaacg acctctcgtc acagtaaaaa tagggggaca gctaaaagaa 180 gctcttttag atacaggagc agatgataca gtattagaag acataaattt gccaggaaaa 240 tggaaaccaa aaatgatagg gggaattgga ggtttcatca aagtaaaaca gtatgatcag 300 atacttatag aaatttgtgg aaaaaaggct ataggtacag tattggtagg gcctacacct 360 gtcaacataa ttggcagaaa tatgttgact caaattggtt gtactttaaa tttcccaatc 420 agtcctattg atactgtacc agtaaagtta aagccaggaa tggatggccc aaaggttaaa 480 caatggccat tgacagaaga aaaaataaaa gcattaacag aaatttgtac agaaatggaa 540 aaggaaggaa aaatttcaaa aattgggcca gaaaatccat acaatactcc aatatttgct 600 ataaagaaaa aagacagcac taaatggaga aaattagtag atttcagaga gctcaataaa 660 agaactcaag acttttggga agttcaatta ggaataccgc atccagcggg cttaaaaaag 720 aaaaaatcag taacagtact agatgtgggg gatgcatatt tttcagttcc cttagatgaa 780 agctttagga agtatactgc attcaccata cctagtacaa acaatgagac accaggaatt 840 aggtatcagt acaatgtgct tccacaggga tggaaaggat caccagcaat attccagagt 900 agcatgacaa aaatcttaga gccctttaga ttaaaaaatc cagaaatgat tatctaccaa 960 tacatggatg acttgtatgt aggatctgat ttagaaatag ggcagcatag aacaaaaata 1020 gaagaactaa gggctcatct attgagctgg gggtttacta caccagacaa gaagcatcag 1080 aaagaacctc cgtttctttg gatgggatat gaactccatc ctgacaagtg gacagtccaa 1140 cctataaagc tgccagaaaa agaaagctgg actgtcaatg atatacagaa attagtgggg 1200 aaactaaatt gggcaagtca aatttatccc gggattaaag taaaacagtt gtgcaaactc 1260 ctcaggggag ccaaagcact aacagatata gtgccattga ctgaggaagc 1310 // ID MK133177; SV 1; linear; genomic DNA; STD; VRL; 1301 BP. XX AC MK133177; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-F8 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1301 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1301 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 2fe47dbe33b9e7bcfc61274423439e42. XX FH Key Location/Qualifiers FH FT source 1..1301 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-F8" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1301 FT /gene="pol" FT CDS <1..>1301 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58015.1" FT /translation="PPEQTRANSPTIRELQVRGDNPRSEAGAERQGTLNFPQITLWQRP FT LVSIKVGGQTKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYDQIVIEICG FT KKAIGSVLVGPTPVNIIGRNMLTQLGCTLNFPISPIETIPVKLKPGMDGPKVKQWPLTE FT EKIKALTAICEEMEKEGKITKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDF FT WEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDENFRKYTAFTIPSINNETPGIRYQY FT NVLPQGWKGSPAIFQSSMTKILEPFRIKNPDLVIYQYMDDLYVGSDLEIGQHRAKVEEL FT RAHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPNKDSWTVNDIQKLVGKL FT NWASQIYPGIKVRQLCKLLRGTKALTDIVPLTEEA" XX SQ Sequence 1301 BP; 503 A; 233 C; 276 G; 289 T; 0 other; cctccagagc agaccagagc caacagcccc accattagag agcttcaagt tcgaggagac 60 aacccccgct ccgaagcagg agctgaaaga cagggaaccc ttaacttccc tcaaatcact 120 ctttggcagc gaccccttgt ctcaataaaa gtagggggcc agacaaagga ggctctctta 180 gatacaggag cagatgatac agtattagaa gatataaatt tgccaggaaa atggaaacca 240 aaaatgatag gaggaattgg aggttttatc aaagtaagac agtatgatca gatagttata 300 gaaatttgtg gaaaaaaggc tataggttca gtattagtag gacctacacc tgtcaacata 360 attggaagaa atatgttgac tcagcttgga tgcacactaa attttccaat cagtcctatt 420 gaaactatac cagtaaaatt aaagccagga atggatggcc caaaggttaa acaatggcca 480 ttgacagaag aaaaaataaa ggcattaaca gcaatttgtg aagaaatgga gaaggaagga 540 aaaattacaa aaattgggcc tgaaaatcca tataacactc caatatttgc tataaaaaag 600 aaagatagta ctaagtggag aaaattagta gatttcaggg aactcaataa aagaactcaa 660 gacttttggg aagttcaatt aggaatacca cacccagcag ggttaaaaaa gaaaaaatca 720 gtgacagtac tggatgtggg agatgcatat ttttcagtcc ctttagatga gaacttcagg 780 aagtatactg cattcaccat acctagtata aacaatgaaa caccagggat tagatatcaa 840 tataatgtgc ttccacaggg atggaaagga tcaccagcaa tatttcagag tagcatgaca 900 aaaatcttag agccctttag aataaaaaac ccagacctag ttatctatca atatatggat 960 gacttgtatg taggatctga cttagaaata gggcaacata gagcaaaagt agaagagcta 1020 agagcacatt tattgaaatg gggattgacc acaccagaca agaaacatca gaaagaaccc 1080 ccatttcttt ggatggggta tgaactccat cctgacaaat ggacagtaca gcccatagtt 1140 ctgccaaaca aagatagctg gactgttaat gatatacaga agttagtggg aaaattaaac 1200 tgggcaagtc agatttaccc agggattaaa gtgagacaac tgtgtaaact ccttagggga 1260 accaaagcac taacagacat agtaccactg acagaagaag c 1301 // ID MK133178; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133178; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-G3 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 73bd9f8bc0d2e6127abf794430020d43. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-G3" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58016.1" FT /translation="SSEQTGAISPTSRAPRDGGRDDLLPEAGTEGQGTTTSYSFPQITL FT WQRPVVAVRVAGQLKEALLDTGADDTVLEDLDLPGKWKPKMIGGIGGFIKVRQYDQIVI FT EICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQW FT PLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSINNETPGI FT RYQYNVLPQGWKGSPAIFQASMTKILEPFRSQNPEIVIYQYMDDLYVGSDLEIGQHRAK FT IQELRDHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPNKDSWTVNDIQKL FT VGKLNWASQIYPGIKVKQLCKLLRGTKALTEVVPLTEEA" XX SQ Sequence 1313 BP; 500 A; 233 C; 284 G; 296 T; 0 other; tcctcagagc agaccggagc catcagcccc accagcagag ctcctaggga tgggggaaga 60 gatgacctcc tccccgaagc aggaacagag ggacagggaa caaccacctc ctacagtttc 120 cctcaaatca ctctttggca acgacccgtt gttgccgtaa gagtagcagg acagctaaaa 180 gaagctctat tagatacagg agcagatgat acagtattag aagatctaga tttaccagga 240 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 300 cagatagtga tagaaatttg tggaaaaaag gctataggta cagtattggt aggacctaca 360 cctgtcaaca taattggaag aaatatgttg actcagattg gttgtacttt aaattttcca 420 attagtccta ttgaaactgt accagtgaaa ttaaagccag gaatggatgg cccaaaggtt 480 aaacaatggc cattgacaga agagaaaata aaagcattaa cagaaatttg tacagaaatg 540 gaaaaggaag gaaaaatttc aaagattggg cctgaaaacc catataatac tccagtattt 600 gctataaaga aaaaagacag cactaaatgg agaaaattag tagatttcag agaactcaat 660 aaaagaactc aggacttctg ggaagttcaa ttaggaatac cacatccagc aggtttaaaa 720 aagaaaaaat cagtaacagt actggatgtg ggggatgcat atttttcagt tcctttagat 780 gaaagcttta gaaagtatac tgcattcacc atacctagta taaacaatga gacaccagga 840 attaggtatc agtacaatgt gctaccacag gggtggaaag gatcaccagc aatattccag 900 gctagcatga caaaaatctt agagcccttt aggtcacaaa atccagaaat agttatctat 960 caatacatgg atgacttgta tgtaggatct gatttagaaa tagggcaaca tagagcaaaa 1020 atacaggagt taagagacca tctcttgaaa tggggattta ctacaccaga caaaaaacat 1080 cagaaggaac ctccatttct ttggatggga tatgaactcc atcctgacaa atggacagtc 1140 caacctatac aactgccaaa caaggacagt tggactgtca atgatataca gaaattagta 1200 ggaaaactaa attgggcaag tcagatttat ccaggaataa aagtaaaaca actgtgtaaa 1260 ctccttaggg ggaccaaagc actaacagag gtagtaccac tgactgaaga ggc 1313 // ID MK133179; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133179; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-A4 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 5312cf2246c73e03cd76cee1f52f2d07. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-A4" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58017.1" FT /translation="SSEQTGTISPTSRDLWNGGRDSLPSEAGAERQGDDPTFSFPQITL FT WQRPLVTVRVGGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVKQYDQVSM FT EICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQW FT PLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDENFRKYTAFTIPSINNETPGI FT RYQYNVLPQGWKGSPAIFQSSMTKILEPFRSQNPEIVIYQYMDDLYVGSDLEIGQHRRK FT IEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQTIQLPEKDSWTVNDIQKL FT VGKLNWASQIYAGIKVKQLCKLIRGTKALTEVVALTKEA" XX SQ Sequence 1313 BP; 500 A; 227 C; 292 G; 294 T; 0 other; tcctcagagc agaccggaac catcagcccc accagcagag atctttggaa tgggggaaga 60 gatagcctcc cctccgaagc aggagcagaa agacagggag atgaccccac ctttagtttc 120 cctcaaatca ctctttggca gcgacccctt gtcacagtaa gagtaggagg acaattaaaa 180 gaagctctat tagatacagg agcagatgat acagtattgg aagatataaa tttgccagga 240 aaatggaaac caaaaatgat agggggaatt ggaggattta tcaaggtaaa acagtatgat 300 caggtatcta tggaaatttg tgggaaaaag gctataggta cagtattagt agggcccaca 360 cctgtcaaca taattggaag aaatatgttg acccagattg gctgtacttt aaattttcca 420 attagtccca ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaggtt 480 aaacaatggc cattgacaga agagaaaata aaagcattaa cagaaatttg tacagaaatg 540 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt 600 gctataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agagctcaac 660 aaaagaactc aggatttctg ggaagttcaa ttaggaatac cacatccagc tggcttaaag 720 aagaaaaaat cagtaacagt actggacgtg ggggacgcat atttttcagt tccattagat 780 gagaacttta gaaagtatac tgcgttcacc atacccagta taaacaatga gacaccagga 840 atcaggtatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccag 900 agtagcatga caaaaatctt agagccattt agatcacaaa atccagaaat agttatctat 960 caatacatgg atgatttgta tgtaggatct gatttagaaa tagggcagca tagaagaaaa 1020 atagaggagt tgagagccca tctattgagc tgggggttta ctacaccaga caaaaaacat 1080 cagaaagaac ctccattcct ttggatggga tatgaactac atcctgacaa atggacagtt 1140 cagactatac agctaccaga aaaagacagc tggactgtca atgatataca gaaattagtg 1200 ggaaaactga attgggcaag tcagatttat gcagggatta aagtaaagca gctgtgtaaa 1260 ctcatcaggg gaaccaaagc attaacagag gtagtagcac taactaagga agc 1313 // ID MK133180; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133180; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-C1 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 26eafcc23f54c8ff0e72cba5b225a4bf. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-C1" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58018.1" FT /translation="STEQTGANSPTSRALWDGERDRPPSEAGAERQGPEPTFSFPQITL FT WQRPIVTVKIGGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYDQILI FT EICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPRVKQW FT PLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDENFRKYTAFTIPSINNETPGI FT RYQYNVLPQGWKGSPAIFQSSMTKILEPFRSKNPDIVIYQYMDDLYVGSDLEIGQHRAK FT IEELRAHLLSWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTVNDIQKL FT VGKLNWASQIFPGIKVKQLCRLLRGAKALTEVVTLTEEA" XX SQ Sequence 1313 BP; 504 A; 237 C; 280 G; 292 T; 0 other; tcaacagagc agactggagc caacagcccc accagcagag ctctttggga tggggaaaga 60 gataggcccc cctccgaagc aggagcagaa cgacagggac cagaacccac ctttagtttc 120 cctcaaatca ctctttggca acgacccatt gtcacagtaa aaataggggg acaactaaaa 180 gaagctctat tagatacagg agcagatgat acagtattag aagacataaa tttgccagga 240 aaatggaaac caaaaatgat agggggaatt ggaggtttca tcaaagtaag acagtatgat 300 cagatactta tagaaatttg tggaaaaaag gctataggta cagtattggt aggacctaca 360 cctgtcaaca taattggaag aaatatgttg acccaaattg gctgtacttt aaatttccca 420 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaagggtt 480 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagaaatttg tacagagatg 540 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccaatattt 600 gctataaaga aaaaagacag cactaaatgg agaaagttag tagacttcag agagctcaat 660 aagagaactc aagacttctg ggaagttcaa ttaggaatac cacatccagc aggtctaaaa 720 aagaaaaaat cagtaacagt actagatgtg ggggacgcat atttttcagt tcccttagat 780 gaaaatttta ggaaatatac tgcgttcacc atacctagta taaacaatga gacaccagga 840 atcagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccag 900 agtagcatga caaaaatctt agagcctttt aggtcaaaaa atccagacat agtcatctat 960 caatacatgg atgacttgta tgtaggatct gatttagaaa tagggcaaca cagagccaaa 1020 atagaggagt taagagctca tctattgagc tggggtctta ctacaccaga caaaaagcat 1080 cagaaagaac ctccatttct ttggatggga tatgaactcc atcctgacaa gtggacagtc 1140 caacctatac agctgccaga caaagatagc tggactgtca atgatataca gaaattagta 1200 gggaaactaa attgggcaag tcaaattttt ccaggaatta aagtgaaaca actgtgtaga 1260 ctccttaggg gagccaaagc actaacagag gtagtaacat taactgagga agc 1313 // ID MK133181; SV 1; linear; genomic DNA; STD; VRL; 1301 BP. XX AC MK133181; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-H1 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1301 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1301 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; f5a5d63e6f11e22795ad0be4ac0c5cf5. XX FH Key Location/Qualifiers FH FT source 1..1301 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-H1" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1301 FT /gene="pol" FT CDS <1..>1301 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58019.1" FT /translation="PSEQTRANSPTNGELQIRGNNPCSEAGVERQGTLNFPQITLWQRP FT LVTIKIGGQVKEALLDTGADDTVLEEMTLPGKWKPKMIGGIGGFIKVRQYDQILIEICG FT KKAIGAVLVGPTPVNIIGRNMLTQLGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTE FT EKIKALTEICKEMEKEGKITKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDF FT WEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDENFRKYTAFTIPSVNNETPGIRYQY FT NVLPQGWKGSPAIFQSSMTKILEPFRAKNPEIVIYQYIDDLYVGSDLEIKQHRAKIEEL FT REHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIKLPEKESWTVNDIQKLVGKL FT NWASQIYPGVKVRNLCKLLRGAKALTDIVPLTEEA" XX SQ Sequence 1301 BP; 503 A; 232 C; 282 G; 284 T; 0 other; ccttcagagc agaccagagc caacagcccc accaatggag agcttcagat tcgaggaaac 60 aacccctgct ccgaagcagg agtcgaaaga cagggaaccc ttaacttccc tcagatcact 120 ctttggcagc gaccccttgt cacaataaaa atagggggcc aggtaaagga ggctctttta 180 gatacaggag cagatgatac agtattagaa gaaatgactt tgccaggaaa atggaaacca 240 aaaatgatag gaggaattgg aggttttatc aaagtaagac agtatgatca aatacttata 300 gaaatttgtg gaaaaaaggc tataggtgca gtattagtgg gacctacacc tgtcaacata 360 attggaagaa atatgttgac tcagcttgga tgtacactaa attttccaat tagtcccatt 420 gaaactgtac cagtaaaatt aaagccagga atggatggcc caaaggttaa acaatggcca 480 ttgacagaag aaaaaataaa agcattaaca gaaatttgta aagaaatgga gaaggaagga 540 aaaattacaa aaattgggcc cgaaaatcca tataacactc caatatttgc cataaaaaag 600 aaggacagta ctaaatggag aaaactagtg gatttcaggg aactcaataa aagaacccaa 660 gacttttggg aagttcaatt aggaatacca cacccagcag ggttaaaaaa gaaaaaatca 720 gtgacagttc tggatgtggg ggatgcatat ttttcagttc ccttagatga aaacttcagg 780 aagtacactg cgttcaccat acctagtgtg aacaatgaaa caccagggat tagatatcaa 840 tataatgtgc ttccacaggg gtggaaagga tccccagcaa tattccagag tagtatgaca 900 aaaatcctag agccatttag agcaaaaaac ccagaaatag ttatctatca atatatagat 960 gacttgtatg taggatctga tttagaaata aagcaacata gagcaaaaat agaggagtta 1020 agggaacacc tattaaaatg gggatttact acaccagaca agaaacatca gaaagaaccc 1080 ccatttcttt ggatggggta tgaactccat cctgacaaat ggacagtaca gcctataaag 1140 ttaccagaaa aagaaagctg gactgtcaat gatatccaga agttagtggg aaaattaaac 1200 tgggcaagtc agatttaccc aggggttaag gtaaggaacc tgtgtaaact ccttagggga 1260 gccaaagcac taacagacat agtaccactg actgaagaag c 1301 // ID MK133182; SV 1; linear; genomic DNA; STD; VRL; 1310 BP. XX AC MK133182; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-D8 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 287a7651a234341fe04faf4a3102b462. XX FH Key Location/Qualifiers FH FT source 1..1310 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-D8" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1310 FT /gene="pol" FT CDS <1..>1310 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58020.1" FT /translation="SSEQTGANSPTSRELRVWGGDNTLSETGAERPGALSFNLPQITLW FT QRPLVTVKIGGQLREALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVKQYDQIAIE FT ICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVTLKPGMDGPRVKQWP FT LTEEKIKALSEICKEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRT FT QDFWEVQLGIPHPAGLKKNKSVTVLDVGDAYFSVPLDENFRKYTAFTIPSINNETPGIR FT YQYNVLPQGWKGSPAIFQSSMTKILEPFRSKNPEIVIYQYMDDLYVGSDLEIRQHRAKV FT EELRAHLLNWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPNKESWTVNDIQKLV FT GKLNWASQIYAGIKVKQLCKLLRGAKALTDVVTLTEEA" XX SQ Sequence 1310 BP; 502 A; 235 C; 281 G; 292 T; 0 other; tcctcagagc agaccggagc caacagcccc accagcagag agcttcgggt ttggggagga 60 gataacaccc tctcagaaac aggagcagaa agaccaggag ctctatcctt taacctccct 120 caaatcactc tttggcagcg acccctagtc acagtaaaaa tagggggaca gctaagggaa 180 gctctattag acacaggagc agatgataca gtattagaag atataaattt gccaggaaaa 240 tggaaaccaa aaatgatagg gggaattgga ggctttatca aagtaaaaca gtatgatcag 300 atagcaatag aaatttgtgg aaaaaaggct ataggtactg tattagtagg acctacacct 360 gtcaacataa ttggaaggaa tatgttgact cagattggtt gtactttaaa ttttccaatt 420 agtcctattg aaactgtacc agtcacctta aagccaggaa tggatggccc aagggttaaa 480 caatggccat tgacagaaga aaaaataaaa gcattatcag aaatttgtaa agaaatggaa 540 aaggaaggaa aaatttcaaa aattgggcct gaaaatccat acaatactcc aatatttgct 600 ataaagaaaa aagatagcac taaatggaga aaattagtag attttagaga actcaataaa 660 agaacccagg acttctggga agttcaatta ggaataccgc atcctgcagg tttaaaaaag 720 aacaaatcag taacagtact ggatgtggga gacgcatatt tttcagtgcc tttagatgaa 780 aacttcagaa aatatactgc attcaccata cctagtataa acaatgagac accaggaatc 840 aggtatcaat acaatgtgct tccacaggga tggaaaggat caccagcaat attccagagt 900 agtatgacaa aaatcttaga gccctttaga tcaaaaaatc cagaaatagt tatctaccaa 960 tacatggatg acttgtatgt agggtctgac ttagaaataa ggcagcatag agcaaaagta 1020 gaggagttga gagcccatct attaaactgg ggacttacta caccagacaa aaagcatcag 1080 aaagaacctc catttctttg gatggggtat gaactccatc ctgacaaatg gacagtgcag 1140 cctatacagc tgccaaacaa agagagctgg actgtcaatg atatacagaa attagtagga 1200 aagctaaatt gggcaagtca aatttatgca gggattaagg taaaacaact gtgcaaactc 1260 ctcagaggag ccaaagcact aacagatgta gtaacactga ctgaggaagc 1310 // ID MK133183; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133183; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-H7 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 735396980d63b64be2af6963a2878a6b. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-H7" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58021.1" FT /translation="SSEQTRANSPTSRELWDGGRGDLPSEARTEGPGIISSHNFPQITL FT WQRPLVTVRIGEQLIEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYDQILI FT EICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIDTVPVKLKPGMDGPKVKQW FT PLTEEKIKALTEICAEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDENFRKYTAFTIPSINNETPGI FT RYQYNVLPQGWKGSPSIFQSSMTKILEPFRTKNPEMVIYQYMDDLYVGSDLEIGQHRAK FT IEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPNKDSWTVNDIQKL FT VGKLNWASQIYPGIKIRQLCKLLRGAKALTDIVTLTGEA" XX SQ Sequence 1313 BP; 504 A; 232 C; 282 G; 295 T; 0 other; tcctcagagc agaccagagc caacagcccc accagcagag aactttggga tgggggaaga 60 ggtgacctcc cctccgaagc aagaaccgag ggaccaggga ttatatcctc ccataacttc 120 cctcaaatca ctctttggca acgaccctta gtcacagtaa gaatagggga acagctaata 180 gaagccctgc tagacacagg agcagatgat acagtattag aagagataaa tttaccagga 240 aaatggaaac caaaaatgat aggaggaatt ggaggcttta tcaaagtaag acagtatgat 300 cagatactta tagaaatttg tggaaaaaag gccataggta cagtattggt aggacctacc 360 cctgtcaaca taattggaag aaatatgttg actcagattg gttgtacttt aaattttcca 420 attagtccta ttgacactgt accagtaaaa ttaaagccag gaatggatgg cccaaaggtt 480 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagaaatttg tgcagaaatg 540 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt 600 gctataaaga aaaaggacag tactaaatgg agaaaattag tagactttag agaactcaat 660 aaaagaactc aagacttctg ggaggttcaa ttaggaatac ctcatcctgc agggttaaaa 720 aagaaaaaat cagtgacagt actagatgtg ggagatgcat atttttcagt tcccttagat 780 gaaaacttta gaaagtatac tgcattcacc atacctagta taaacaatga gacaccagga 840 atcaggtatc agtataatgt gcttccacag ggatggaaag gatcaccgtc aatatttcag 900 agtagcatga caaaaatctt agagcccttc agaacaaaaa atccagaaat ggtgatctac 960 caatacatgg atgatttata tgtaggatct gatttagaaa tagggcagca tagagcaaaa 1020 atagaggaat tgagagcaca tctattaagt tggggattta ccacaccaga caaaaagcat 1080 cagaaagaac ctccatttct gtggatggga tatgaactcc atccggacaa atggacagtt 1140 cagcctatac agctgccaaa caaagacagc tggactgtca atgacataca gaaattagta 1200 ggaaaattaa attgggcaag tcagatttat ccaggaatta aaataaggca attgtgtaaa 1260 ctcctcaggg gagcaaaagc gctaacagat atagtaacgc tgactgggga agc 1313 // ID MK133184; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133184; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-G5 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; d2ea7e16a3c51562eb31cf7b5662aeff. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-G5" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58022.1" FT /translation="SPEQTRANSPTSGRLGDGGRDDPPSEAGTEGQGTISFSNFPQITL FT WQRPLVTAKIGGQLIEALLDTGADDTVLESINIPGKWKPKMIGGIGGFIKVRQYDQIPV FT EICGKKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQW FT PLTEEKIKALTEICAEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDENFRKYTAFTIPSTNNETPGI FT RYQYNVLPQGWKGSPSIFQSSMTKILEPFRAKNPEMVIYQYMDDLYVGSDLEIGQHRAK FT IEELRAHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTVNDIQKL FT VGKLNWASQIYAGIKVKQLCKLLRGAKGLTDVITLTEEA" XX SQ Sequence 1313 BP; 511 A; 233 C; 282 G; 287 T; 0 other; tccccagagc agaccagagc caacagcccc accagcggaa ggctggggga tgggggaaga 60 gatgaccccc cctcagaagc aggaaccgag ggacaaggaa ctatatcctt ctctaacttc 120 cctcaaatca ctctttggca acgaccccta gtcacagcaa aaataggggg acagctaata 180 gaagccctat tagacacagg agcagatgat acagtattag aaagtataaa tataccagga 240 aaatggaaac caaaaatgat agggggaatt ggaggcttta ttaaagtaag acaatatgat 300 cagatacctg tagaaatttg tggaaaaaag gccataggta cagtattggt aggacctaca 360 cctgtcaaca taattgggag aaatctgttg actcagattg gttgtacttt aaattttcca 420 attagtccta ttgaaactgt accagtaaaa ttaaaaccag gaatggatgg cccaaaagtt 480 aaacaatggc cattgacaga agagaaaata aaagcattaa cagaaatttg tgcagaaatg 540 gaaaaagaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt 600 gctataaaga aaaaggacag tactaaatgg agaaaattag tagatttcag agagctcaat 660 aaaagaactc aagacttctg ggaggtccaa ttaggaatac ctcatcctgc aggattgaaa 720 aagaaaaaat cagtaacagt actagatgtg ggagatgcat atttttcagt tcccttagat 780 gaaaacttta gaaaatacac tgcattcacc atacctagta caaacaatga gacaccagga 840 atcaggtatc agtataatgt gcttccacag ggatggaagg gatcaccatc aatatttcag 900 agtagcatga caaaaatctt agagcccttt agagcaaaaa atccagaaat ggtgatctac 960 caatacatgg atgatttata tgtaggatct gacttagaaa taggacagca tagagcaaaa 1020 atagaggagt tgagagcaca tctattaaga tgggggttta caacaccaga caaaaagcat 1080 caaaaagaac ctccatttct gtggatggga tatgaactcc atcctgacaa atggacagtt 1140 cagcctatac agctgccaga caaagacagc tggactgtca atgatataca gaaattagtg 1200 ggaaaactaa attgggcaag tcagatttat gcaggaatta aagtaaaaca actgtgtaaa 1260 ctcctcagag gagcaaaagg gctaacagat gtaataacac tgactgagga agc 1313 // ID MK133185; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133185; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-H6 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; fa8039ff4c61410bc6c006cf5ca4f4be. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-H6" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58023.1" FT /translation="SSEQTRTNSPTSRSPGDGGRDNLISEAGAEGQGTASSLSLPQITL FT WQRPVVAIKVEGQLKEALLDTGADDTVLEDIKLSGKWKPRMIGGIGGFIKVRQYDQITI FT EICGKKATGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIKTVPVKLKPGMDGPKVKQW FT PLTEEKIKALTAICKEMEEEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSTNNEAPGV FT RYQYNVLPQGWKGSPAIFQYSMTKILEPFRSQNPEIIIYQYMDDLYVGSDLEIGQHRTK FT VEELREHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKL FT VGKLNWASQIYPGIKVRQLCKLLRGAKALTDVVPLTEEA" XX SQ Sequence 1313 BP; 500 A; 232 C; 288 G; 293 T; 0 other; tcctcagagc agaccagaac caacagcccc accagcagat ctcctgggga tgggggaaga 60 gataacctca tctccgaagc aggagcagag ggacagggaa cagcctcctc ccttagtctc 120 cctcaaatca ctctttggca acgacccgtt gtcgcaataa aagtagaagg acagctaaaa 180 gaagctctgt tagatacagg agcagatgat acagtattag aagacataaa attatcagga 240 aaatggaaac caagaatgat agggggaatt ggaggtttta tcaaagtaag gcagtatgat 300 caaataacta tagaaatttg tggaaaaaag gctacaggta cagtgttagt aggacctaca 360 cctgtcaaca taattggaag gaacatgttg actcagattg gttgtacttt aaattttcca 420 attagtccta ttaaaactgt accagtaaaa ttaaagccag gaatggatgg cccgaaggtt 480 aaacaatggc cattgacaga agaaaaaata aaagcattga cagcaatttg taaagagatg 540 gaggaagaag gcaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt 600 gctataaaga aaaaagacag cactaaatgg agaaaattag tagattttag agaactcaat 660 aagagaaccc aggacttctg ggaagttcaa ttaggaatac cgcatccagc gggtttgaaa 720 aagaaaaaat cagtaacagt actagatgtg ggggacgcat atttttcagt tcctttagat 780 gaagacttta gaaagtatac tgcattcacc atacctagta caaataatga agcaccagga 840 gtcagatatc agtacaatgt gctgccacag ggatggaaag gatcaccagc aatattccag 900 tacagcatga caaaaatctt agagcccttt agatcacaaa atccagaaat aattatctat 960 caatacatgg atgatttgta tgtaggatct gatttagaaa tagggcagca tagaacaaaa 1020 gtagaggagt taagagaaca tctattgaga tggggattaa ctacaccaga caaaaagcat 1080 cagaaggaac ctccatttct ttggatggga tatgaactcc atcctgacaa atggacagtc 1140 cagcctatac agctgccaga aaaagacagc tggactgtca atgatataca gaaattagtg 1200 ggaaaactaa attgggcaag tcagatttat ccagggatta aagtaagaca actgtgtaaa 1260 ctcctcagag gagccaaagc actaacagat gtagtaccat tgactgagga agc 1313 // ID MK133186; SV 1; linear; genomic DNA; STD; VRL; 1301 BP. XX AC MK133186; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-A7 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1301 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1301 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; fc3b8b8e1ea4e27e7cd9a7cb47b80cb5. XX FH Key Location/Qualifiers FH FT source 1..1301 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-A7" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1301 FT /gene="pol" FT CDS <1..>1301 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58024.1" FT /translation="PSEQATANGPTSRELQVRGDNPLSEAGAKRQGTLNFPQITLWQRP FT LATIKIGGQIKEALLDTGADDTVLEDIKLPGNWKPKMIGGIGGFIKVRQYDQILIEICG FT KKAIGTVLIGPTPVNIIGRNMLTQLGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTE FT EKIKALTAICEDMKKEGKISKIGPENPYNTPVFAIKRKDSTKWRKLVDFRELNKRTQDF FT WEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKEFRKYTAFTIPSINNETPGIRYQY FT NVLPQGWKGSPSIFQSSMTKILEPFRSKNPEIVIYQYMDDLYVGSDLEIGQHRAKIEEL FT RNHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVEKL FT NWASQIYPGIKVRQLCKLLRGAKALTDIVPLTEEA" XX SQ Sequence 1301 BP; 505 A; 234 C; 274 G; 288 T; 0 other; ccttcagagc aggccacagc caacggcccc accagcagag agcttcaggt tcgaggagac 60 aacccccttt ccgaagcagg agccaaaaga caaggaaccc ttaacttccc tcaaatcact 120 ctttggcaac gaccccttgc tacaataaaa atagggggac agataaagga ggctctctta 180 gacacaggag cagatgatac agtattagaa gacataaaat tgccaggaaa ttggaaacca 240 aaaatgatag gaggaattgg aggttttatt aaagtaagac agtatgatca aatacttata 300 gaaatttgtg gaaaaaaggc tataggtaca gtactaatag gacctacacc cgtcaacata 360 attggaagaa atatgttgac tcagcttgga tgtacactaa attttccaat tagtcctatt 420 gaaactgtac cagtaaaatt aaagccagga atggatggcc caaaggtcaa acaatggcca 480 ctgacagaag agaaaataaa agcattaaca gcaatttgtg aagatatgaa aaaggaagga 540 aaaatttcaa aaattgggcc tgagaatcca tataataccc cagtatttgc cataaaaagg 600 aaggacagta ctaagtggag aaaattagta gatttcaggg aactcaataa aagaactcaa 660 gacttttggg aagttcaatt aggaatacca cacccagcag ggttaaaaaa gaaaaaatca 720 gtgacagtac tggatgtggg ggatgcatat ttttcagttc ctttagataa ggaattcagg 780 aagtatactg cattcaccat acctagtata aataatgaaa caccagggat tagatatcaa 840 tataatgtgc ttccacaagg atggaaagga tcaccatcaa tattccagag tagcatgaca 900 aaaatcttag agccctttag atcaaaaaac ccagaaatag tcatctatca atatatggat 960 gacttatatg taggatctga cttagaaata gggcaacata gagcaaagat agaagagtta 1020 agaaaccatc tattgaggtg gggatttacc acaccagaca agaaacatca gaaagaacca 1080 ccatttcttt ggatggggta tgaactccat cctgacaaat ggacagttca gcctatacag 1140 ctgccagaaa aggatagctg gactgtcaat gatatacaga agttagtgga aaaattaaac 1200 tgggcaagtc agatttaccc agggattaaa gtaaggcaac tgtgtaaact tcttagggga 1260 gccaaagcac taacagacat agtaccactg actgaagaag c 1301 // ID MK133187; SV 1; linear; genomic DNA; STD; VRL; 1295 BP. XX AC MK133187; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-A3 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1295 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1295 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 5a01a0a2979cc1c8b0884737726a1297. XX FH Key Location/Qualifiers FH FT source 1..1295 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-A3" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1295 FT /gene="pol" FT CDS <1..>1295 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58025.1" FT /translation="PSEQTRAIGPTSRDPRGNNPHSEAGVERQGTLNFPQITLWQRPLV FT TIKVGGQVKEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYDQITIEICGKK FT AIGAVLVGPTPVNIIGRNMLTQLGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEK FT IKALIAICEEMEKEGKITKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWE FT VQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDENFRKYTAFTIPSLNNETPGIRYQYNV FT LPQGWKGSPAIFQSSMTKILEPFRANNPEIVIYQYMDDLYVGSDLEIGQHRAKIEELRE FT HLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIKLPEKDSWTVNDIQKLVGKLNW FT ASQIYPGIRVKNLCKLLRGTKALTDIVPLTEEA" XX SQ Sequence 1295 BP; 509 A; 226 C; 272 G; 288 T; 0 other; ccttcagaac agaccagagc catcggcccc accagcagag atcctcgggg aaacaatccc 60 cactccgaag caggagtcga aagacaggga accctcaatt tccctcaaat cactctttgg 120 cagcgacccc ttgtcacaat aaaagtagga ggtcaggtaa aagaggctct cttagacaca 180 ggagcagatg atacagtatt agaagagata aatttgccag gaaaatggaa accaaaaatg 240 ataggaggaa ttggaggttt tatcaaagta agacagtatg atcaaataac tatagaaatt 300 tgtggaaaaa aggctatagg tgcagtatta gtgggaccta cacctgtcaa cataattgga 360 agaaacatgt tgactcaact tggatgcaca ctaaattttc caattagtcc cattgaaact 420 gtaccagtaa aactgaagcc aggaatggat ggcccaaagg ttaaacaatg gccattgaca 480 gaagaaaaaa taaaagcatt aatagcaatt tgtgaagaaa tggaaaagga aggaaaaatt 540 acaaaaattg ggcctgaaaa tccatataac actccaatat ttgctataaa aaagaaggac 600 agtactaagt ggagaaaatt agtagatttc agggaactca ataaaagaac tcaagacttt 660 tgggaggttc aattaggaat accacaccca gcagggttaa aaaagaaaaa atcagtgaca 720 gtattagatg tgggggatgc atatttttca gttcctttag atgaaaactt caggaaatat 780 actgcattca ccatacctag tttaaacaat gaaacaccag ggattagata tcaatataat 840 gtgcttccac agggatggaa aggatcacca gcaatattcc aaagtagcat gacaaaaatc 900 ttagagccat ttagagcaaa taatccagaa atagtcatct atcaatatat ggatgactta 960 tatgtagggt ctgatttaga aatagggcaa catagagcaa aaatagagga gttaagagaa 1020 catctattaa gatggggatt cactacacca gataagaaac atcagaaaga acccccattt 1080 ctttggatgg ggtatgaact acatcctgac aaatggacag tacagcctat aaagctgcca 1140 gaaaaggaca gctggactgt caatgatata cagaagttag tgggaaaatt aaactgggca 1200 agtcagattt acccaggaat tagagtaaag aatctttgta aactccttag ggggaccaaa 1260 gcactaacag acatagtacc actaactgaa gaagc 1295 // ID MK133188; SV 1; linear; genomic DNA; STD; VRL; 1334 BP. XX AC MK133188; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-E2 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1334 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1334 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 493b2e47b8c8a7168369480455c4ec13. XX FH Key Location/Qualifiers FH FT source 1..1334 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-E2" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1334 FT /gene="pol" FT CDS <1..>1334 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58026.1" FT /translation="SPEQARTFSSTSREFRVWGGDNPLSETGTERPETGTERRGTVPSL FT SFPQITLWQRPIVTIKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVR FT QYDQVSLEICGHKTVGTVLIGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMD FT GPKVKQWPLTEEKIKALTEICTDMEKEGKISRIGPENPYNTPIFAIKKKDSTKWRKLVD FT FRELNKRTQDFWEVQLGIPHPAGLKKNKSVTVLDVGDAYFSVPLDEEFRKYTAFTIPSI FT NNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEMVIYQYMDDLYVGSDLD FT IGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPVELPSKDSWT FT VNDIQKLVGKLNWASQIYPGIKVKQLCKLIRGTKSLTEVVPLTEEA" XX SQ Sequence 1334 BP; 507 A; 228 C; 292 G; 307 T; 0 other; tctccagagc aggccagaac cttcagctcc accagcagag agtttcgggt ttggggagga 60 gataaccccc tctccgaaac aggaacagaa agacccgaaa caggaacaga aagacgaggg 120 actgtaccct cccttagctt ccctcaaatc actctttggc agcgacccat tgttaccata 180 aagataggag ggcagctaaa ggaagctcta ttagatacag gagcagatga tacagtatta 240 gaagaaatga atttgccagg aaaatggaaa ccaaaaatga tagggggaat tggaggtttt 300 atcaaagtaa gacagtatga tcaagtatcc ttagaaatct gtggacataa aactgtaggc 360 acagtattaa taggacctac acctgtcaac ataattggaa gaaatttgtt gacacagatt 420 ggctgcacct taaattttcc aattagtcct attgaaactg tgccagtaaa attaaagcca 480 ggaatggatg gcccaaaagt taaacaatgg ccattgacag aagagaaaat aaaagcattg 540 acagaaattt gtacagatat ggaaaaggaa ggaaaaattt caagaattgg gcctgaaaat 600 ccatacaata ctccaatatt tgccataaag aaaaaggaca gtactaagtg gagaaaatta 660 gtagatttca gagaacttaa taaaagaact caagattttt gggaagttca attaggaata 720 ccacatcctg cagggttaaa aaagaacaag tcagtaacag tattggatgt gggggatgca 780 tatttttcag ttcccttaga tgaggagttc aggaagtaca ctgcatttac catacctagt 840 ataaacaatg agacaccagg gattagatat cagtacaatg tgcttccaca gggatggaaa 900 ggatcaccgg caatattcca aagtagcatg acaaaaatct tagagccctt tagaaaacaa 960 aatccagaaa tggttattta tcaatacatg gatgatttgt atgtagggtc tgacttagac 1020 atagggcagc atagagcaaa aatagaagag ttaagagaac atctattgaa atgggggttt 1080 actacaccag acaaaaaaca tcagaaagaa cctccattcc tttggatggg atatgaactc 1140 catcctgata agtggacagt gcagcctgta gaattgccaa gcaaagatag ctggactgtc 1200 aatgatatac agaagttagt aggaaaacta aattgggcaa gtcagattta tccaggaatt 1260 aaagtaaagc agttatgtaa actcattagg ggaaccaaat cactaacaga agtagtacca 1320 ttaacagaag aggc 1334 // ID MK133189; SV 1; linear; genomic DNA; STD; VRL; 1307 BP. XX AC MK133189; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-C4 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1307 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1307 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 0a492a9b30bdca1dbe7fe78c12d11d4c. XX FH Key Location/Qualifiers FH FT source 1..1307 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-C4" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1307 FT /gene="pol" FT CDS <1..>1307 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58027.1" FT /translation="SPEQTRTNSPTSRALWDGGRDSLPSEAGTEGQGPTFSFPQITLWQ FT RPIVTVKIGGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYDQILIEI FT CGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPL FT TEEKIKALTEICTDMEKEGKISRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQ FT DFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDENFRKYTAFTIPSTNNETPGVRY FT QYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPEMVIYQYMDDLYVGSDLEIGQHRTKIE FT ELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKEHWTVNDIQKLVG FT KLNWASQIYAGIKVKQLCKLLRGAKALTDIVTLTEEA" XX SQ Sequence 1307 BP; 499 A; 231 C; 285 G; 292 T; 0 other; tccccagagc agaccagaac caacagcccc accagcagag ctctttggga tgggggaaga 60 gatagcctcc cctccgaagc aggaacagaa ggacagggac ccaccttcag tttccctcaa 120 atcactcttt ggcaacgacc tattgtcaca gtaaaaatag ggggacagct aaaagaagct 180 ctattagata caggagcaga tgatacagtg ttagaagaca taaatttgcc aggaaaatgg 240 aaaccaaaaa tgataggagg aattggaggt ttcattaaag taagacagta tgatcaaata 300 cttatagaaa tctgtggaaa aaaggctata ggtacagtgt tggtaggacc tacacctgtc 360 aacataattg gaagaaatat gttgacccag attggttgta ctctaaattt cccaattagt 420 cctattgaga ctgtaccagt aaaattaaag ccaggaatgg atggcccaaa ggttaaacaa 480 tggccattga cagaagaaaa aataaaagca ttaacagaaa tctgtacaga tatggaaaag 540 gaaggaaaaa tttcaagaat tgggcctgaa aatccataca atactccaat atttgctata 600 aagaaaaaag acagtactaa atggagaaaa ttagtagatt tcagagagct caataaaaga 660 acacaggact tttgggaagt tcaattaggc ataccgcatc cagcgggcct aaaaaagaaa 720 aagtcagtaa cagtactgga tgtaggggac gcatattttt cagttccttt agatgaaaac 780 tttaggaagt atactgcatt cacaatacct agcacaaaca atgagacacc aggagtcagg 840 tatcagtaca atgtgcttcc acagggatgg aaaggatcac cagcaatatt ccagagtagc 900 atgacaaaaa tcttagaacc ctttagagca aaaaatccag aaatggttat ctatcaatac 960 atggatgact tatatgtagg atctgatttg gaaatagggc agcatagaac aaaaatagaa 1020 gagttaagag ctcacttgtt gagctgggga tttactacac cagataaaaa gcatcagaaa 1080 gaacctccat tcctgtggat gggatatgag ctacatcctg acaagtggac tgtccagcct 1140 atagtgttgc cagaaaaaga acactggact gtcaatgata tacaaaaatt agtgggaaaa 1200 ctaaattggg caagtcaaat ttatgcaggg attaaagtca agcaattgtg taaactcctc 1260 aggggagcca aagcactaac agatatagta acattgactg aggaagc 1307 // ID MK133190; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133190; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-B5 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 98745ec5eba76af094290de2af83848a. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-B5" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58028.1" FT /translation="PSEQARANSPTSRELRVRGGDNTLSEAGDERKGTGSSFNFPQITL FT WQRPLVTIKVGGQLREALLDTGADDTVLEDINLEGKWKPKMIGGIGGFIKVKQYEEVLI FT EIEGRKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKIKQW FT PLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPIFAIRKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSTNNETPGI FT RYQYNVLPQGWKGSPAIFQHSMTKILEPFRAKNPELVIYQYMDDLYVGSDLEIGHHRAK FT IEELRKHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQSIQLPEKDSWTVNDIQKL FT VGKLNWASQIYTGIRVRQLCKLLRGAKALTDIVPLTAEA" XX SQ Sequence 1313 BP; 507 A; 218 C; 286 G; 302 T; 0 other; ccttcagaac aggctagagc caacagcccc accagcagag agcttcgggt tcggggagga 60 gataacaccc tctccgaggc aggagatgaa agaaaaggga caggatcctc ctttaacttc 120 cctcaaatca ctctttggca acgaccctta gttacaataa aagtaggggg acagttaagg 180 gaagctttat tagatacagg agcagatgat acagtattag aagatataaa tttggaagga 240 aaatggaaac caaaaatgat agggggaatt ggaggtttta ttaaagtaaa acagtatgaa 300 gaagtactta tagaaattga aggaagaaaa gctataggta cagtattagt aggacctaca 360 cctgtcaaca taattggaag aaacatgttg actcagattg gttgtacttt aaattttcca 420 attagtccta ttgagactgt accagtaaaa ttaaagccag gaatggatgg cccaaaaatt 480 aagcaatggc cattgacaga agaaaaaata aaagcattaa cagaaatatg cacagaaatg 540 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc cttacaatac tccaatattt 600 gcaataagga aaaaggacag tactaaatgg agaaaattag tagatttcag ggaacttaat 660 aaaagaactc aggatttctg ggaagttcaa ttaggaatac cacatcctgc agggttaaaa 720 aagaaaaaat cagtaacagt actggatgtg ggagatgcat atttttcagt tcccttagat 780 aaggatttca ggaagtacac tgcatttacc attcctagta ctaacaatga gacaccagga 840 ataagatatc aatataatgt gcttccacag ggatggaaag gttcaccagc aatattccaa 900 catagtatga caaaaatctt agagcctttc agagcaaaaa atccagaact ggttatttac 960 cagtacatgg atgatttgta tgtagggtct gatttagaaa tagggcatca tagagcaaaa 1020 atagaggaat taagaaagca tctattgaag tggggattta ccacaccaga caaaaaacat 1080 cagaaagagc ccccatttct ttggatgggg tatgaactcc atcctgacaa atggacagta 1140 cagtctatac agctgccaga aaaggacagc tggactgtca atgatataca aaagttagtg 1200 ggaaaactca attgggcaag tcagatctat acagggatta gagtaaggca actatgtaaa 1260 ctcctcaggg gggccaaagc actaacagac atagtaccac taactgcaga agc 1313 // ID MK133191; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133191; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-G1 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 1fb896e1548f305920b72eb5eda0fe2f. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-G1" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58029.1" FT /translation="SPEQTRAISPASRRSWDGGRGGPLHETGAEKQGTGSSLSFPQITL FT WQRPLVTIKIGGQIKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYDQILM FT EICGKKAIGTVLVGPTPINIIGRNMLTQIGCTLNFPISPIETVPVALKPGMDGPKIKQW FT PLTEEKIKALTEICNEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKNFRKYTAFTIPSINNETPGI FT RYQYNVLPQGWKGSPAIFQSSMTKILEPFRVKNPELVIYQYMDDLYVGSDLEIGQHRTK FT IEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIKLPDKDCWTVNDIQKL FT VGKLNWASQIYPGIKVRQLCKLIRGAKALTDVVPLTEEA" XX SQ Sequence 1313 BP; 497 A; 227 C; 288 G; 301 T; 0 other; tccccagagc agaccagagc catcagcccc gccagcagaa gatcttggga tgggggaagg 60 ggtggccccc tccatgaaac aggagcagag aaacagggaa ccggatcttc cctcagtttc 120 cctcagatca ctctttggca acgacccctt gtcacaataa aaataggagg acagataaaa 180 gaagctctat tagatacagg agcagatgat acagtattag aagacataaa tttgccagga 240 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 300 cagatactta tggaaatttg tggaaaaaag gctataggta cagtgttagt aggacctacc 360 cctatcaaca taattggaag aaatatgttg actcagattg gttgtacttt aaattttcca 420 ataagtccta ttgaaactgt accagtagca ttaaagccag gaatggatgg cccaaagatt 480 aaacaatggc cattaacaga agaaaaaata aaggcattaa cagaaatttg taatgagatg 540 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac accagtattt 600 gctataaaga aaaaagacag cactaaatgg aggaaattag tggatttcag ggagctcaat 660 aaaagaactc aggacttttg ggaagttcaa ttaggaatac cacatccagc gggtttaaaa 720 aagaaaaagt cagtaacagt actagatgta ggggatgcat atttttcagt tcctttagat 780 aaaaacttta gaaagtatac tgcattcacg atacctagta taaacaatga gacaccaggg 840 atcagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccag 900 agcagcatga caaaaatctt agagcccttt agagtaaaaa atccagaatt agttatctat 960 caatatatgg atgacttgta tgtaggctct gatttagaaa taggacagca tagaacaaaa 1020 atagaggagt tgagagctca tctattgagc tggggattta ctacaccaga caaaaagcat 1080 cagaaagaac ctccatttct ttggatggga tatgaactcc atcctgacaa atggacagtc 1140 cagcctataa agctgccaga caaagactgc tggactgtca atgatataca gaaattagtg 1200 ggaaaactaa attgggcaag tcaaatttat ccagggatta aagtaaggca actgtgtaaa 1260 ctcatcagag gagccaaagc actgactgat gtagtaccac tgactgagga agc 1313 // ID MK133192; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133192; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-H8 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 444251c8ce16195986bf744de2eb7e53. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-H8" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58030.1" FT /translation="SSEQTRANSPASREPWDGGRNDLPCEAGTEGQGTIPSSNFPQITL FT WQRPLVAVRVGGKLVEALLDTGADDTVLEEIDLPGKWKPKMIGGIGGFIKVRQYDQILM FT EICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQW FT PLTEEKIKALTDICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGI FT RYQYNVLPQGWKGSPAIFQCSMTKILEPFRTKNPELVIYQYMDDLYIGSDLEIEQHRAK FT IEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQTIELPDKDSWTVNDIQKL FT VGKLNWASQIYPGIKVKQLCRLLRGAKALTDIVPLTEEA" XX SQ Sequence 1313 BP; 498 A; 237 C; 291 G; 287 T; 0 other; tcctcagagc agaccagagc caacagcccc gccagcagag agccttggga tgggggaaga 60 aatgacctcc cctgtgaagc aggaaccgag gggcaaggaa ctataccctc ctctaacttc 120 cctcaaatca ctctttggca acgaccccta gttgcagtaa gagtaggggg aaagctagta 180 gaagccctac tagacacagg agcagatgat acagtattag aagaaataga tttaccagga 240 aaatggaagc caaaaatgat agggggaatt ggaggtttta tcaaagtaag acaatatgat 300 cagatactta tggaaatttg tggaaaaaag gctataggca cagtattagt aggacctaca 360 cctgtcaaca taattggaag aaatatgttg actcagattg gttgtacttt aaatttccca 420 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg gccaaaagtt 480 aaacaatggc cattaacaga agaaaaaata aaagcattaa cagacatttg tacagagatg 540 gaaaaggaag gaaaaatttc aaaaattggg cctgagaatc catacaatac tccagtattt 600 gctataaaga aaaaggacag tactaaatgg agaaaattag tagattttag ggagcttaat 660 aaaagaactc aagacttctg ggaggtccaa ttaggaatac ctcatcctgc ggggttaaaa 720 aagaaaaaat cagtaacagt actagatgtg ggggatgcat atttttcagt tcccttagat 780 aaagacttta gaaagtacac tgcattcacc atacctagta taaacaatga gacaccggga 840 atcaggtatc agtacaatgt gcttccgcag ggatggaaag gatcaccagc aatattccag 900 tgtagcatga caaaaatctt agagcccttc agaacaaaaa atccagagtt ggtgatctac 960 caatacatgg atgatttata tatagggtct gacttagaaa tagagcagca tagagcaaaa 1020 atagaggagc taagagaaca cctattgaaa tggggattta ccacaccaga caaaaagcat 1080 caaaaggaac ccccatttct ttggatggga tatgaactcc atcctgacaa atggacagtc 1140 cagaccatag aactgccaga caaagacagc tggactgtca atgatataca gaaattagta 1200 ggaaaactga attgggcaag tcagatttat ccaggaatta aagtaaaaca gctgtgtaga 1260 ctcctcagag gagccaaagc gctaacagat atagtaccac tgactgagga agc 1313 // ID MK133193; SV 1; linear; genomic DNA; STD; VRL; 1301 BP. XX AC MK133193; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-C9 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1301 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1301 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; bd6afdc744e8421caa357a5774e578d7. XX FH Key Location/Qualifiers FH FT source 1..1301 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-C9" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1301 FT /gene="pol" FT CDS <1..>1301 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58031.1" FT /translation="PSEQTRANSPSSRELQIRGDNPPSEAGVERQGTLAFPQITLWQRP FT LVTIKVGGHLREALLDTGADDTVLEEIKLPGNWKPKMIGGIGGFIKVKQYDQILIEICG FT KKAIGTVLVGPTPVNIIGRNMLTQLGCTLNFPISSVETVPVKLKPGMDGPKVKQWPLTE FT EKIKALRAICDEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDF FT WEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSINNETPGIRYQY FT NVLPQGWKGSPAIFQCSMTKILEPFRAQNPEIVIYQYMDDLYVGSDLEIGQHRAKIEEL FT REHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKL FT NWASQIYRGIKVKQLCKLLRGAKALTDIVPLTEEA" XX SQ Sequence 1301 BP; 499 A; 234 C; 281 G; 287 T; 0 other; ccttcagagc agaccagagc caacagcccc tccagcagag agcttcagat tcgaggagac 60 aaccccccct ccgaagcagg agtcgaaaga cagggaaccc ttgctttccc tcaaatcact 120 ctttggcagc gaccccttgt cacaataaaa gtagggggac acttaaggga ggctctctta 180 gatacaggag cagatgatac agtattagaa gaaataaaat taccaggaaa ctggaaacca 240 aaaatgatag gaggaattgg aggttttatc aaagtaaaac aatatgatca aatacttata 300 gaaatttgtg gaaaaaaggc tataggtaca gtactagtag gacctacacc tgtcaacata 360 attggaagaa atatgttgac tcagcttgga tgcacactaa attttccaat tagttccgtt 420 gaaactgtac cagtaaaatt aaagccaggg atggatggcc caaaggtcaa acaatggcca 480 ctgacagaag agaaaataaa agcattaaga gcaatttgtg atgagatgga gaaagaagga 540 aaaattacaa aaattgggcc tgaaaatcca tataacactc cagtatttgc cataaaaaag 600 aaggatagta ctaagtggag aaaattagta gatttcaggg aactcaataa aagaactcaa 660 gacttttggg aagttcaatt aggaatacca cacccagcag ggttaaaaaa gaaaaaatca 720 gtaacagtac tggatgtggg ggatgcatat ttttcagttc ctctagatga aagctttagg 780 aagtatactg cattcaccat acctagtata aacaatgaaa caccagggat taggtatcaa 840 tataatgtgc ttccacaggg atggaaagga tcaccagcaa tattccagtg tagcatgaca 900 aaaatcttag agccctttag ggcacaaaac ccagaaatag tcatctatca atatatggat 960 gacttgtatg taggatctga cttagaaata ggacaacata gagcaaaaat agaggagtta 1020 agagaacatc tattgagatg gggatttacc acaccagaca agaaacatca gaaagaacct 1080 ccatttcttt ggatggggta tgaactccat cctgacaaat ggacagtaca gcctatacaa 1140 ctgccagaaa aggatagctg gactgtcaat gatatacaga agttagtagg aaaattaaac 1200 tgggcaagtc agatttaccg agggattaaa gtaaaacaac tgtgtaaact ccttagggga 1260 gccaaagcac taacagatat agtaccactg actgaggaag c 1301 // ID MK133194; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133194; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-B9 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; c555bbf80a64ef23f50aae8814ad92f2. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-B9" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58032.1" FT /translation="SSEQTRANSPTSRVLWDGGRDNPPSEAETGRQGTEPTFSFPQITL FT WQRPVVTVRIGGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVKQYDQILI FT EICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPRVKQW FT PLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEGFRKYTAFTIPSVNNETPGI FT RYQYNVLPQGWKGSPAIFQSSMTKILEPFRSKYPEIVIYQYMDDLYVGSDLEIGQHRSK FT IEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIELPEKESWTVNDIQKL FT VGKLNWASQIYAGIKVKQLCRLLRGAKALTDVVTLTEEA" XX SQ Sequence 1313 BP; 500 A; 233 C; 287 G; 293 T; 0 other; tcctcagagc agaccagagc caacagcccc accagcagag ttctttggga tgggggaaga 60 gataaccccc cttccgaagc agaaacagga agacagggaa ccgaacccac ctttagtttc 120 cctcaaatca ctctttggca acgaccagtt gtcacagtaa gaataggggg acagctaaaa 180 gaagctctat tagatacagg agcagatgat acagtattag aagacataaa tttgccagga 240 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaggtaaa acagtatgat 300 cagatactta tagaaatctg tggaaaaaag gctataggta cagtattagt aggacctaca 360 cctgtcaaca taattggaag aaatatgttg acccagattg gttgtacttt aaatttccca 420 attagtccca ttgagactgt accagtaaaa ttaaagccag gaatggatgg cccaagggtt 480 aaacaatggc cattgacaga agaaaaaata aaagcactaa cagaaatttg tacagaaatg 540 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt 600 gctataaaga aaaaagacag cactaaatgg agaaaattag tagatttcag agaactcaat 660 aaaagaacac aagacttttg ggaagttcaa ttaggaatac cgcatcccgc gggcctaaaa 720 aagaagaaat cagtaacagt actagatgtg ggggacgcat atttttcagt tcctctagat 780 gaaggcttta gaaaatatac tgcattcacc atacctagtg taaacaatga gacaccagga 840 atcaggtatc agtacaatgt gcttccgcaa ggatggaaag gatcaccggc aatattccag 900 agtagcatga caaaaatctt agagcccttt agatcaaaat atccagagat agttatctat 960 caatacatgg atgacttgta tgtaggatct gatttagaaa taggacagca tagatcaaaa 1020 atagaagagt tgagagctca tctattgagc tggggattta ctacaccaga caaaaagcat 1080 cagaaagaac ctccattcct ttggatgggc tatgaactcc atcctgacaa atggacagtc 1140 cagcctatag agctgccaga aaaagaaagc tggactgtca atgatataca gaaattagtg 1200 gggaaactaa attgggcaag tcaaatttat gcaggaatta aggtaaagca attgtgtaga 1260 ctcctcaggg gagccaaagc actaacagat gtagtgacat tgactgaaga agc 1313 // ID MK133195; SV 1; linear; genomic DNA; STD; VRL; 1301 BP. XX AC MK133195; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-E3 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1301 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1301 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 744023082f07b1efd00d5cbbaa713344. XX FH Key Location/Qualifiers FH FT source 1..1301 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-E3" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1301 FT /gene="pol" FT CDS <1..>1301 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58033.1" FT /translation="SSEQTRANSPTSRALWDGGRDSLPSEEGGTDPTLNFPQITLWQRP FT VVTVKIEGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVKQYDQILIEICG FT KKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTE FT EKIKALTDICTEMEKEGKISRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDF FT WEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQY FT NVLPQGWKGSPAIFQSSMTKILEPFRLKNPDIVIYQYMDDLYVGSDLEIGEHRTKIEEL FT RAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIKLENKESWTVNDIQKLVGKL FT NWASQIYPGIQVKQLCKLLRGAKALTDVVALTEEA" XX SQ Sequence 1301 BP; 499 A; 230 C; 280 G; 292 T; 0 other; tcctcagagc agaccagagc caacagcccc accagcagag ctctttggga tgggggacga 60 gatagcctcc cctccgaaga aggaggaaca gaccccaccc tcaatttccc tcaaatcact 120 ctttggcaac gacccgttgt cacagtaaaa atagagggac agctaaaaga agctctgtta 180 gatacaggag cagatgatac agtattagaa gacataaatt tgccaggaaa atggaaacca 240 aaaatgatag ggggaattgg aggtttcatc aaggtaaaac agtatgatca gatactcata 300 gaaatttgtg gaaaaaaggc tataggtaca gtattagtag gacctacacc tgtcaacata 360 attggaagaa atatgttgac ccagattggt tgtactctaa atttcccaat tagtcctatt 420 gagactgtac cagtaaaatt gaagccagga atggatggcc caaaggttaa acaatggcca 480 ttgacagagg aaaaaataaa agcattaaca gatatttgta cagaaatgga aaaggaagga 540 aaaatttcaa gaattgggcc tgaaaatcca tacaatactc caatatttgc tataaagaaa 600 aaagacagca ctaaatggag aaaattagta gatttcagag agctcaataa aagaactcaa 660 gacttttggg aagttcaatt agggatacca cacccagcag ggttaaaaaa gaaaaaatca 720 gtaacagtac tagatgtggg ggatgcatat ttttcagttc ctttagataa agacttcagg 780 aaatatactg cattcaccat accaagtata aacaatgaga cgccaggaat caggtatcag 840 tacaatgtgc ttccacaagg atggaaagga tcaccggcaa tattccagag tagcatgaca 900 aaaatcttag agccctttag attaaaaaat ccagacatag ttatctatca atacatggat 960 gacttatatg taggatctga tttggaaata ggggagcata gaacaaaaat agaggaattg 1020 agagctcatc tattgagttg gggatttact acaccagata agaagcatca aaaagaacct 1080 ccatttctgt ggatgggata tgaactccat cctgacaagt ggacagtcca gcctataaag 1140 ctggaaaata aagaaagctg gactgtcaat gatatacaga aattagtggg aaaactaaat 1200 tgggcaagtc aaatttatcc aggaattcag gtaaaacaac tatgtaaact cctcagggga 1260 gccaaagccc taacagatgt agtagcactg actgaggaag c 1301 // ID MK133196; SV 1; linear; genomic DNA; STD; VRL; 1316 BP. XX AC MK133196; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-C8 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1316 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1316 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; c218146238773fc9810b0e493fda7965. XX FH Key Location/Qualifiers FH FT source 1..1316 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-C8" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1316 FT /gene="pol" FT CDS <1..>1316 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58034.1" FT /translation="SPEQTRADSPTSGALGDGGRDSPPLSEAGGERQGTDPTFSFPQIT FT LWQRPIVTVKVGGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVKQYDQIV FT IEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQ FT WPLTEEKIKALTEICTDMEKEGKISRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNK FT RTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPG FT IRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPEMIIYQYMDDLYVGSDLEIGQHRT FT KIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQSIQLPEKDSWSVNDIQK FT LVGKLNWASQIYPGIKVKQLCRLLRGTKALTDIVPLTEEA" XX SQ Sequence 1316 BP; 505 A; 231 C; 282 G; 298 T; 0 other; tccccagagc agaccagagc cgacagcccc accagcggag ctcttgggga tgggggaaga 60 gatagccccc ccctctctga agcaggagga gaaagacagg gaaccgaccc cacctttagt 120 ttccctcaaa tcactctttg gcaacgaccc attgtcacag taaaagtagg gggacagcta 180 aaagaagctc tattagatac aggagcagat gatacagtat tagaagacat aaacttacca 240 ggaaaatgga aaccaaaaat gataggggga attggagggt tcatcaaggt aaaacaatat 300 gatcagatag ttatagaaat ttgtggaaaa aaggctatag gtacagtatt agtaggacct 360 acacctgtca acataattgg aagaaatatg ttgacccaga ttggttgtac tttaaatttc 420 ccaataagtc ctattgagac tgtaccagta aaattaaagc caggaatgga tggcccaaaa 480 gttaaacaat ggccattgac agaagaaaaa ataaaagcat taacagaaat ttgtacagat 540 atggaaaagg aaggaaaaat ttcaagaatt gggcctgaaa atccatataa tactccaata 600 tttgctataa agaaaaaaga cagtactaaa tggagaaaat tagtagattt cagagagctc 660 aataaaagaa cacaagattt ctgggaagtt caattaggaa taccgcatcc agcgggccta 720 aagaagaaaa aatcagtaac agtactagac gtgggtgatg catatttttc agttccttta 780 gataaagact ttagaaagta tactgcattc accataccta gtataaacaa tgagacacca 840 ggaatcaggt atcaatacaa tgtgcttcca cagggatgga aaggatcacc agcaatattc 900 cagtctagca tgacaaaaat cttagagccc tttagagcaa aaaatccaga gatgatcatt 960 tatcaataca tggatgactt gtatgtagga tctgatttag aaatagggca gcatagaaca 1020 aaaatagaag aattaagagc tcatctgttg agctgggggt ttactacacc agacaaaaag 1080 catcagaaag aacccccatt tctttggatg ggatatgaac tacatcctga taaatggaca 1140 gttcagtcta tacagctgcc agaaaaagac agctggtctg tcaatgatat acagaaatta 1200 gtggggaaac taaattgggc aagtcaaatt tatccaggga ttaaagtaaa gcagctgtgt 1260 agactcctta gaggaactaa agcattaaca gatatagtac cactgactga agaagc 1316 // ID MK133197; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133197; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 2-E9 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 0a9c269e197d3e9aef1c11789f1a890e. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="2-E9" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58035.1" FT /translation="SSEQTRANSPTSRDLWDGGRDDLPSKAGAERQGTEPTFSFPQITL FT WQRPLVTVKIGGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVKQYDQILI FT EICGKKAIGTVLVGPTPVNIIGRNILTQIGCTLNFPISPIETVPVTLKPGMDGPKVKQW FT PLTEEKIKALTDICTEMEKEGKISRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDENFRKYTAFTIPSTNNETPGI FT RYQYNVLPQGWKGSPAIFQSSMTKILEPFRSKNPEIIIYQYMDDLYVGSDLEIGQHRTK FT VEELRNHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKL FT VGKLNWASQIYAGLRIKHLCKLLRGAKALTEVVTLTEEA" XX SQ Sequence 1313 BP; 510 A; 231 C; 279 G; 293 T; 0 other; tcctcagagc agaccagagc caacagcccc accagcagag atctttggga tgggggaaga 60 gatgacctcc cctccaaagc aggagcagaa aggcagggaa cagaacccac ctttagtttc 120 cctcaaatca ctctttggca acgacccctt gtcacagtaa aaataggagg acagctaaaa 180 gaagctctat tagatacagg agcagatgat acagtattag aggatataaa tttgccagga 240 aaatggaaac caaaaatgat agggggaatt ggagggttta tcaaagtaaa acagtatgat 300 cagatactta tagaaatttg tgggaaaaag gctataggta cagtgttagt aggacctaca 360 cctgtcaaca taattggaag aaatatattg acccagattg gttgtacttt aaattttcca 420 atcagtccta ttgagactgt accagtaaca ttaaaaccag gaatggatgg cccaaaggtt 480 aaacaatggc cattaacaga agaaaaaata aaagcattaa cagacatttg tacagaaatg 540 gaaaaggaag gaaaaatttc aagaattggg cctgaaaatc catacaatac tccaatattt 600 gctataaaga aaaaagatag cactaaatgg aggaaattag tagatttcag agagctcaat 660 aaaagaacac aagacttttg ggaagttcaa ttaggaatac cgcatccagc gggcctaaaa 720 aagaaaaaat cagtaacagt actagatgtg ggggacgcat atttttcagt ccctctagat 780 gaaaacttta gaaaatatac tgcattcacc atacctagta caaataatga gacaccagga 840 attaggtatc agtacaatgt gcttccacag ggatggaaag gatcaccggc aatattccag 900 agtagcatga caaaaatctt agagcccttt agatcaaaaa atccagaaat aattatctat 960 caatacatgg atgacttgta cgtaggatct gatttagaaa tagggcaaca tagaacaaaa 1020 gtagaggagt taagaaatca tctattgagc tgggggttca ctacaccaga caaaaagcat 1080 cagaaagaac ctccatttct ttggatggga tatgaactac atcctgacaa atggacagtc 1140 cagcctatac agctaccaga aaaagacagc tggactgtca atgacataca gaaattagtg 1200 gggaaactaa attgggcaag tcaaatttat gcagggctta gaataaagca tttgtgtaaa 1260 ctccttagag gagccaaagc actaacagaa gtagtgacat tgactgagga agc 1313 // ID MK133198; SV 1; linear; genomic DNA; STD; VRL; 1310 BP. XX AC MK133198; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 3-I8 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; c8b10c8394103098bd24d6b7e4136a73. XX FH Key Location/Qualifiers FH FT source 1..1310 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="3-I8" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1310 FT /gene="pol" FT CDS <1..>1310 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58036.1" FT /translation="PSEQARANSPTSGEPRVRGGDSPLPETGAEGQGTASLNFPQITLW FT QRPLVAVKIGGQIIEALLDTGADDTVLEEIDLPGRWKPKMIGGIGGFIKVRQYDQILME FT ISGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWP FT LTEEKIKALTEICNDMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRT FT QDFWEVQLGIPHPAGLKKKRSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSVNNETPGIR FT YQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPEIVIYQYMDDLYVASDLEIGQHRAKI FT EELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIELPDKDSWTVNDIQKLV FT GKLNWASQIYAGIKVKQLCKLLRGTKALTDIVPLTAEA" XX SQ Sequence 1310 BP; 499 A; 234 C; 289 G; 288 T; 0 other; ccttcagaac aggccagagc caacagcccc accagcggag agcctcgggt tcggggagga 60 gatagccccc tccccgaaac aggagccgaa ggacaaggaa ctgcatccct taacttccct 120 caaatcactc tttggcagcg acccctagtc gcagtaaaaa taggggggca gataatagag 180 gccctattag acacaggagc agatgacaca gtattagaag aaatagattt accaggaaga 240 tggaaaccaa aaatgatagg aggaattgga ggttttatca aagtaagaca gtatgatcag 300 atacttatgg aaattagtgg aaaaaaggct atagggacag tactagtagg acctacacct 360 gtcaacataa ttgggagaaa tatgttgact caaattggtt gtacgctaaa ttttccaatt 420 agccctattg aaactgtacc agtaaaatta aagccaggaa tggatggtcc aaaggttaaa 480 cagtggccat tgacagaaga aaaaataaaa gcattaacag aaatttgtaa tgacatggaa 540 aaggaaggaa aaatttcaaa aatagggcct gaaaatccat acaatactcc aatatttgcc 600 ataaagaaaa aggatagtac taaatggaga aaattagtag attttagaga actcaataaa 660 agaactcaag atttttggga agtccaatta ggaatacctc atcccgcggg gttaaaaaag 720 aaaagatcag taacagtact agatgtgggg gacgcatatt tttcagttcc cttagataaa 780 gacttcagaa agtatactgc attcactata cctagtgtaa ataatgagac accagggatt 840 agatatcagt acaatgtgct tccacaggga tggaaaggat caccagcaat atttcagagt 900 agcatgacaa aaattttaga gccctttaga gcaaaaaatc cagaaatagt tatctatcaa 960 tacatggatg atttgtatgt agcatctgac ttagaaatag ggcagcatag agcaaaaata 1020 gaggagttga gggaacatct actgaaatgg ggatttacca ccccagacaa aaagcatcag 1080 aaagaacccc catttctttg gatgggatat gaactccatc ctgacaaatg gacagtccag 1140 cctatagagt tgccagacaa ggacagctgg actgtcaatg atatacagaa attagtagga 1200 aaactaaatt gggcaagtca gatttatgca gggattaaag taaaacagtt atgcaaactc 1260 cttaggggga caaaagcact aacagacata gtaccactga ctgcagaagc 1310 // ID MK133199; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133199; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 3-E6 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 145d50997452df4946f30be2dddd2903. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="3-E6" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58037.1" FT /translation="SSEQTRANSPTRRELQVWGRDNNSLSEAGADRQGTVSFSFPQITL FT WQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVRQYDQILI FT EICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPRVKQW FT PLTEEKIKALTAICEDMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDENFRKYTAFTIPSINNAAPGI FT RYQYNVLPQGWKGSPAIFQSSMTKILEPFRTQNPDIVIYQYMDDLYVGSDLEIGQHRAK FT IEKLREHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKL FT VGKLNWASQIYPGIKVKQLCKLLRGAKALTDIVPLTEEA" XX SQ Sequence 1313 BP; 496 A; 236 C; 289 G; 292 T; 0 other; tcttcagagc agaccagagc caacagcccc accagaagag agcttcaggt ttggggaaga 60 gacaacaact ccctctcaga agcaggagcc gatagacaag gaactgtatc ctttagcttc 120 cctcagatca ctctttggca gcgacccctc gtcacaataa agataggggg gcaattaaag 180 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgaa tttgccagga 240 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 300 cagatactca tagaaatctg cggacataaa gctataggta cagtattagt aggacctaca 360 cctgtcaaca taattggaag aaatctgttg actcagattg gctgcacttt aaattttcca 420 attagtccca ttgaaactgt accagtaaaa ttaaagccag ggatggatgg cccaagggtt 480 aaacaatggc cattgacaga agagaaaata aaagcattaa cagcaatttg tgaagacatg 540 gagaaggaag gaaaaattac aaaaattggg cctgaaaatc catataacac tccagtattt 600 gccataaaaa agaaggacag tactaagtgg agaaaattag tagatttcag ggaactcaat 660 aaaagaactc aagacttttg ggaagttcaa ttaggaatac cacacccagc agggttaaaa 720 aagaaaaaat cagtgacagt gctggatgtg ggggatgcat atttttcagt tcctttagat 780 gaaaacttca ggaaatatac tgcattcacc atacctagta taaacaatgc agcaccaggg 840 attagatatc aatataatgt gcttccacag ggatggaaag gatcaccagc aatattccag 900 agtagcatga caaaaatctt agagcccttt aggacacaaa atccagacat agttatctat 960 caatatatgg atgacttgta tgtaggatct gacttggaaa tagggcaaca tagagcaaaa 1020 atagagaagt taagagaaca tttattgaaa tggggactca ccacaccaga caagaaacat 1080 cagaaagaac ccccatttct ttggatgggg tatgaactcc atcctgacaa atggacagta 1140 cagcctatac agctgccaga aaaggatagc tggactgtca atgatataca gaagttagtg 1200 ggaaaattaa actgggcaag tcagatttac ccagggatta aagtaaagca actgtgtaaa 1260 ctccttaggg gagccaaagc attaacagac atagtaccac tgactgaaga agc 1313 // ID MK133200; SV 1; linear; genomic DNA; STD; VRL; 1310 BP. XX AC MK133200; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 3-C7 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; fe491e9872543c8ff1ea4225c841f2d9. XX FH Key Location/Qualifiers FH FT source 1..1310 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="3-C7" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1310 FT /gene="pol" FT CDS <1..>1310 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58038.1" FT /translation="PPEQARANSPATGELRIWGGNSPLSETGAERQGTVSFNFPQITLW FT QRPIVTIKIGGHLKEALLDTGADDTVLEDINLPGKWRPKMIGGIGGFIKVRQYDQIPLE FT ICGQKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPRVKQWP FT LTEEKIKALTEICTDMEKEGKISRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRT FT QDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLYEDFRKYTAFTIPSINNETPGIR FT YQYNVLPQGWKGSPAIFQNSMTKILEPFRIKNPDLIIYQYMDDLYVGSDLEIGQHRTKI FT EELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPNKDSWTVNDIQNLV FT GKLNWASQIYPGIKVRHLCKLLRGAKALTDIVPLTTEA" XX SQ Sequence 1310 BP; 495 A; 231 C; 281 G; 303 T; 0 other; cctccagagc aggccagagc caacagcccc gccactggag agcttcggat ttggggagga 60 aatagccccc tctcagaaac aggagcagaa agacaaggaa ccgtctcctt taacttccct 120 caaatcactc tttggcagcg acccattgtt acaataaaga tagggggaca tctaaaggaa 180 gctctattag atacaggagc agatgataca gtattagaag acataaattt gccaggaaaa 240 tggagaccaa aaatgatagg gggaattgga ggttttatca aagtaagaca gtatgatcaa 300 atacctctag aaatttgtgg acagaaagca ataggtacag tattagtagg acctacacct 360 gtcaacataa ttggaagaaa tttgttgact cagattggct gcactctaaa ttttccaatt 420 agtcctattg aaacagtacc agtaaaatta aagccaggaa tggatggccc aagagttaag 480 caatggccat tgacagaaga aaaaataaaa gcattaacag aaatttgtac agatatggaa 540 aaggaaggaa aaatttcaag aattgggcct gaaaatccat ataatactcc aatttttgct 600 ataaagaaaa aagacagtac taagtggaga aaattagtag atttcaggga acttaataag 660 agaactcaag acttctggga agttcaacta ggaataccac atcctgcagg gctaaaaaag 720 aagaagtcag taacagtatt ggatgtgggt gatgcatatt tctcagttcc cttatatgaa 780 gactttagaa aatatactgc attcaccata cctagtataa acaatgagac accagggatt 840 agatatcagt ataatgtgct tccacaagga tggaaaggat caccggcaat attccaaaac 900 agcatgacaa aaatcttaga gccctttaga ataaaaaatc cagacttaat tatctatcaa 960 tacatggatg atttgtatgt agggtctgat ctagaaatag ggcagcatag aacaaaaata 1020 gaagagttaa gggaacatct actgagatgg ggattcacta caccagacaa aaaacatcag 1080 aaagaacctc cattcctttg gatggggtat gagctccatc ctgataaatg gacagtgcag 1140 ccgatacaat tgccaaataa ggatagctgg actgtcaatg atatacagaa tttagtagga 1200 aagctaaatt gggcaagcca gatttatcca gggattaaag taaggcattt atgtaaactc 1260 cttaggggag ccaaggcact aacagacata gtgccactga ctacggaagc 1310 // ID MK133201; SV 1; linear; genomic DNA; STD; VRL; 1304 BP. XX AC MK133201; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 3-C6 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1304 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1304 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 17f22a77b6a25644afee7c588544ff0c. XX FH Key Location/Qualifiers FH FT source 1..1304 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="3-C6" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1304 FT /gene="pol" FT CDS <1..>1304 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58039.1" FT /translation="PSEQTRANSPTSRELQVRGDDEPCFEAGVERQGTLNFPQITLWQR FT PLVSIKVGGQIKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYDQIVIEIC FT GKKAIGSVLVGPTPVNIIGRNMLTQLGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLT FT EEKIKALTAICDEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQD FT FWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDENFRKYTAFTIPSINNETPGIRYQ FT YNVLPQGWKGSPAIFQSSMTKILEPFRVQNPEIVIYQYMDDLYVGSDLEIGQHRAKIEE FT LRKHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQQIQLPEKESWTVNDIQKLVGK FT LNWASQIYSGIKVKQLCKLLRGTKALTDIVPLTEEA" XX SQ Sequence 1304 BP; 500 A; 233 C; 284 G; 287 T; 0 other; ccttcagaac agaccagagc caacagcccc accagcagag agcttcaagt tcgaggagac 60 gacgaaccct gctttgaagc aggagtcgaa agacagggaa cccttaattt ccctcaaatc 120 actctttggc agcgacccct tgtctcaata aaagtagggg gccaaataaa ggaagctctc 180 ttagacacag gagcagatga tacagtgtta gaagatataa atttgccagg aaaatggaaa 240 ccaaaaatga taggaggaat tggaggtttt atcaaagtaa gacaatatga tcaaatagtt 300 atagaaattt gtggaaaaaa ggctataggt tcagtattag tgggacctac ccctgtcaac 360 ataattggaa gaaatatgtt gacccagctt ggatgcacct taaattttcc aattagtccc 420 attgaaactg taccagtaaa attaaagcca ggaatggatg gcccgaaggt caaacaatgg 480 cctttgacag aagagaaaat aaaagcatta acagcaattt gtgatgaaat ggagaaggaa 540 ggaaaaatta caaaaattgg gcctgaaaat ccatataaca ctccagtatt tgccataaaa 600 aagaaggaca gtactaagtg gagaaaatta gtagatttca gggaactcaa taaaagaact 660 caagactttt gggaagttca attaggaata ccacacccgg cagggttaaa aaagaaaaaa 720 tcagtgacag tactggatgt gggggatgca tatttttcag ttcctttaga tgaaaacttc 780 agaaagtata ctgcattcac catacctagc ataaacaatg aaacaccagg gattagatac 840 caatataatg tgcttccaca gggatggaaa ggatcaccag caatattcca gagtagcatg 900 acaaaaatct tagagccctt cagggtacaa aatccagaaa tagtcatcta tcaatacatg 960 gatgacttat atgtaggatc tgacttagaa atagggcaac atagagcaaa aatagaggag 1020 ttaagaaaac atctattaag gtggggattt accacaccag acaagaaaca tcagaaagaa 1080 cccccatttc tttggatggg gtatgaactc catcctgaca aatggacagt acagcagata 1140 cagctgccag aaaaggagag ctggactgtc aatgatatac agaagttagt gggaaagtta 1200 aactgggcaa gtcagatata ttcagggatt aaggtaaagc aactttgtaa actccttagg 1260 gggaccaaag cactaacaga catagtacca ctaactgaag aagc 1304 // ID MK133202; SV 1; linear; genomic DNA; STD; VRL; 1301 BP. XX AC MK133202; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 3-F6 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1301 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1301 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; c9fc9bfb637d65341ab0a5aa4dbbc727. XX FH Key Location/Qualifiers FH FT source 1..1301 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="3-F6" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1301 FT /gene="pol" FT CDS <1..>1301 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58040.1" FT /translation="PSEQTRAISPTSRELQVRGDNPRSEAGAEGQGTFNFPQITLWQRP FT LVSIKIGGQIREALLDTGADDTVLEEINLPGNWKPKMIGGIGGFIKVRQYDQILIEICG FT KKAIGTVLVGPTPVNIIGRNILTQLGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTK FT EKIKALTEICEEMEKEGKITKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQEF FT WEVQLGIPHPGGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQY FT NVLPQGWKGSPAIFQSSMTKILEPFRTQNPDIDICQYVDDLYVGSDLEIGQHRAKIEEL FT REHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKEAWTVNDIQKLVGKL FT NWASQIYPGIKVKQLCRLLRGAKALTDIVPLTEEA" XX SQ Sequence 1301 BP; 500 A; 234 C; 285 G; 282 T; 0 other; ccttcagagc agaccagagc catcagcccc accagcagag agcttcaggt tcgaggagac 60 aacccccgct ccgaagcagg agccgaagga cagggaacct ttaacttccc tcaaatcact 120 ctttggcaac gaccccttgt ctcaataaaa atagggggcc agataaggga agccctctta 180 gatacaggag cagatgatac agtattagaa gaaataaatt tgccaggaaa ttggaagcca 240 aaaatgatag gaggaattgg aggttttatc aaagtaagac agtatgatca aatacttata 300 gaaatatgtg gaaaaaaggc cataggtaca gtattggtag gacctacacc tgtcaacata 360 attgggagaa atatattgac tcagcttgga tgtacactaa attttccaat tagtcctatt 420 gaaactgtac cagtaaaatt aaagccagga atggatggcc caagagttaa acaatggcca 480 ttgacaaaag aaaaaataaa agcattaaca gaaatttgtg aagaaatgga aaaggaagga 540 aaaattacaa aaattgggcc tgaaaatcca tataacactc caatatttgc cataaaaaag 600 aaggacagta ctaagtggag aaaattagta gatttcaggg aacttaataa aagaactcaa 660 gaattttggg aagttcaatt aggaataccc cacccaggag ggttaaaaaa gaaaaaatca 720 gtgacagtac tggatgtggg ggatgcatat ttttcagttc cgttagatga agacttcagg 780 aaatatactg cgttcaccat acctagcata aacaatgaaa caccagggat tagatatcaa 840 tataatgtgc ttccacaggg atggaaagga tcaccagcaa tattccaaag tagcatgaca 900 aaaatcttag agccctttag gacacaaaac ccagacatag atatctgtca atatgtggat 960 gacttgtatg taggatctga cttagaaata gggcaacata gagcaaaaat agaggagtta 1020 agagaacatt tattgaaatg ggggcttact actccagaca agaaacatca gaaggaaccc 1080 ccatttctgt ggatggggta tgaactccat cctgacaaat ggacagtaca gcctatacag 1140 ctgccagaaa aagaagcctg gactgtcaat gacatacaga agttagtggg aaaactaaat 1200 tgggcaagtc agatttaccc agggatcaaa gtaaagcaac tgtgtagact ccttagggga 1260 gccaaggcat taacagacat agtaccacta actgaagaag c 1301 // ID MK133203; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133203; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 3-D6 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 51c0278201756525332e4684cfb368c6. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="3-D6" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58041.1" FT /translation="SSEQTGANSPTSRELWDGGRDNLLFKAGTGGQGTISSLDFPQITL FT WQRPIVTVKIGGQPIEALLDTGADDTVLEEISLPGKWKPKMIGGIGGFIKVRQYDQILI FT EICGKRAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQW FT PLTEEKIKALTEICAEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKSFRKYTAFTIPSINNETPGI FT RYQYNVLPQGWKGSPAIFQSSMTRILEPFRTRNPEMVIYQYMDDLYVGSDLEIGQHRAK FT IEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIMLPEKDSWTVNDIQKL FT VGKLNWASQIYPGIKVKQLCKLLRGAKALTDIVILTEEA" XX SQ Sequence 1313 BP; 501 A; 224 C; 288 G; 300 T; 0 other; tcctcagagc agaccggagc caacagcccc accagcagag agctttggga tgggggaaga 60 gataacctcc tcttcaaagc aggaaccggg ggacaaggga ctatatcctc ccttgacttc 120 cctcaaatca ctctttggca acgacccata gtcacagtaa aaataggggg acagccaata 180 gaagccctac tagacacagg agcagatgat acagtattag aagaaataag tttaccagga 240 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag gcaatatgat 300 caaatactta tagaaatttg tggaaaaagg gctataggta cagtattagt aggacctaca 360 cctgttaaca taattgggag aaatatgttg actcagattg gctgtacttt aaattttcca 420 attagtccta ttgaaactgt accagtaaaa ttaaaaccag gaatggatgg cccaaaggtc 480 aagcaatggc cattgacaga ggaaaaaata aaagcattaa cagaaatttg tgcagagatg 540 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt 600 gctataaaga agaaggacag tactaaatgg agaaaattag tagattttag agagctcaat 660 aaaagaactc aagacttttg ggaggtccaa ttaggaatac ctcatcctgc gggattaaaa 720 aagaaaaaat cagtaacagt actagatgtg ggagatgcat atttttcagt tcctttagat 780 aaaagcttta gaaagtatac tgcattcacc atacctagta taaacaatga gacaccagga 840 atcaggtatc aatacaatgt gcttccacag ggatggaaag gatcaccggc aatatttcag 900 agtagcatga ccagaatctt agagcccttt agaacaagaa atccagagat ggtgatctac 960 caatatatgg atgatttata tgtaggatct gacttagaaa tagggcagca tagagcaaaa 1020 atagaggaat tgagagaaca tctactgaaa tggggattta ctacaccaga caaaaagcat 1080 cagaaagaac ctccatttct ttggatggga tatgaactcc atcctgataa atggacggtc 1140 caacctataa tgctgccaga aaaagatagc tggactgtca atgatataca gaaattagtg 1200 ggaaaactaa attgggcaag tcagatttat ccaggaatta aagtaaagca actgtgtaaa 1260 ctcctcaggg gagccaaagc gctaacagat atagtaatac tgactgagga agc 1313 // ID MK133204; SV 1; linear; genomic DNA; STD; VRL; 1310 BP. XX AC MK133204; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 3-D3 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 27fd27ec8c58e115a2700645bafaf8a0. XX FH Key Location/Qualifiers FH FT source 1..1310 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="3-D3" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1310 FT /gene="pol" FT CDS <1..>1310 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58042.1" FT /translation="PSEQTRANSTTSRELWTGGRDALLPEAGIEGQGVISSSFPQITLW FT QRPLVSARIGGQLIEALLDTGADDTVLEKIDLPGKWRPKMIGGIGGFIKVRQYDQISIE FT ICGKRAIGTVLVGPTPVNIIGRNILTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWP FT LTEEKIKALTAICEEMEKEGKITKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRT FT QDFWEVQLGIPHPAGLKKKRSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGVR FT YQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPEIVIYQYMDDLYVGSDLEIEQHRAKI FT EELRGHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKENWTVNDIQKLI FT GKLNWASQIYAGIKVKQLCKLLRGAKALTDIVTLTEEA" XX SQ Sequence 1310 BP; 507 A; 223 C; 286 G; 294 T; 0 other; ccctcagagc agaccagagc caacagcacc accagcagag agctttggac tgggggaaga 60 gatgccctcc tccctgaagc agggatcgag ggacaaggag ttatatcctc tagcttccct 120 caaatcactc tttggcaacg acccctagtc tcagcaagaa tagggggaca gctaatagaa 180 gccctactag acacaggagc agatgataca gtattagaaa aaatagattt accgggaaaa 240 tggagaccaa aaatgatagg gggaattgga gggtttatta aagtaagaca atatgatcag 300 atatctatag aaatttgtgg aaaaagagct ataggtacag tattagtagg acctacacct 360 gtcaatataa ttggaaggaa tatattgact cagattggct gtactttaaa ttttccaatt 420 agtcctattg aaactgtacc agtaaaatta aagccaggaa tggatggccc aaaggttaaa 480 caatggccat taacagaaga aaaaataaaa gcattaacag caatttgtga agagatggaa 540 aaggaaggaa aaattacaaa aattgggcct gaaaacccat ataatactcc aatatttgct 600 ataaagaaaa aggacagcac taaatggaga aaattagtag actttaggga actcaataaa 660 agaactcagg acttctggga ggtccaatta ggaatacctc atcctgcagg gttaaaaaag 720 aaaagatcag taacagtact agatgtggga gacgcatatt tttcagttcc tttagataaa 780 gattttagaa agtatactgc attcaccata cctagtataa acaatgagac accaggagtt 840 aggtatcagt acaatgtgct tccacaggga tggaaaggat caccagcaat atttcagagt 900 agcatgacaa aaatcctaga gccctttagg ataaaaaatc cagaaatagt gatctatcaa 960 tacatggatg atttatatgt aggatctgac ttagaaatag aacagcatag agcaaaaata 1020 gaggagttga gaggacatct gttgaggtgg ggatttacca caccagacaa aaaacatcaa 1080 aaagaacctc catttctttg gatgggatat gaactccatc ctgacaaatg gacagtccag 1140 cctatacagc tgccagaaaa agagaactgg actgtgaatg atatacagaa attaatagga 1200 aaactaaatt gggcaagtca gatttatgca ggaattaaag taaagcaact gtgtaaactc 1260 cttaggggag ccaaagcact aacagatata gtaacactga cggaggaagc 1310 // ID MK133205; SV 1; linear; genomic DNA; STD; VRL; 1310 BP. XX AC MK133205; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 3-A3 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 4d7701b8573af830572ad00e71549071. XX FH Key Location/Qualifiers FH FT source 1..1310 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="3-A3" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1310 FT /gene="pol" FT CDS <1..>1310 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58043.1" FT /translation="PSEQTRTNSPTNGELRVWGGDDPLSETGAERQGTVSCNFPQITLW FT QRPLVSIKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQILIE FT ICGQKAVGTVLIGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWP FT LTEEKIKALAEICTDMEKEGKISRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRT FT QDFWEIQLGIPHPAGLKKKKSVTVLDIGDAYFSVPLDEDFRKYTAFTIPSINNETPGIR FT YQYNVLPQGWKGSPAIFQCSMIKILEPFRKQNPEIVIYQYMDDLYVGSDLEIEQHRTKI FT EELREHLLKWGLTTPDRKHQKEPPFLWMGYELHPDKWTVQPIILPEKESWTVNDIQKLV FT GKLNWASQIYGGIKVRQLCKLLRGAKALTEVVQLTREA" XX SQ Sequence 1310 BP; 510 A; 213 C; 281 G; 306 T; 0 other; ccttcagagc agaccagaac caacagcccc accaatggag agcttcgggt ttggggagga 60 gatgaccccc tctcagaaac aggagcagaa agacaaggaa ctgtatcctg taacttccct 120 caaatcactc tttggcaacg accccttgtc tcaataaaga tagggggaca actaaaagaa 180 gctctattag atacaggagc agatgataca gtattagaag aaatgaattt gccaggaaaa 240 tggaagccaa aaatgatagg gggaattgga ggttttatca aagtaagaca atatgatcaa 300 atactcatag aaatctgtgg acagaaagca gtaggtacag tattaatagg acctacacct 360 gttaacataa ttggaagaaa tttgttgact cagatcggtt gcactttaaa ctttccaatc 420 agtcctattg aaactgtacc tgtaaaatta aaaccaggaa tggatgggcc aaaagttaaa 480 caatggccat tgacagaaga aaaaataaaa gcattagcag agatttgtac agatatggaa 540 aaggaaggaa aaatttcgag aattgggcct gaaaatccat acaatactcc aatatttgcc 600 ataaagaaaa aagacagtac taagtggaga aaactagtag attttagaga acttaataag 660 agaactcaag acttctggga aattcaatta ggaataccgc atcctgcggg gctaaaaaag 720 aagaaatcag tgacagtact ggatataggt gatgcatatt tttcagttcc tttagatgaa 780 gactttagga agtatactgc atttaccata cctagtataa ataatgagac accagggatt 840 agatatcagt acaatgtgct tccacaggga tggaaaggat cgccagcaat attccaatgt 900 agtatgataa aaatcttaga gccctttaga aaacaaaatc cagaaatagt tatttatcaa 960 tatatggatg atttgtatgt aggatctgac ttagaaatag agcagcatag gacaaaaata 1020 gaggaattaa gagaacatct attgaagtgg ggattgacca caccagacag aaaacatcag 1080 aaagaacctc catttctttg gatgggttat gagctccatc ctgataaatg gacagtgcag 1140 cctataatac tgccagaaaa ggaaagctgg actgtcaatg atatacagaa gttagtagga 1200 aaattaaatt gggcaagcca gatttatgga ggaattaaag taagacaatt atgtaaactc 1260 cttagaggag ccaaagcact gacagaagta gtacaactaa caagagaagc 1310 // ID MK133206; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133206; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 3-I7 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; d46ebf9799188219c56a3885df8660dc. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="3-I7" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58044.1" FT /translation="SSEQTRANSPTSRDLWDGGRESLSSDAGAERQGTGPTLNFPQITL FT WQRPVVTVRIAGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYDQILI FT EICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIQPVPVTLKPGMDGPKVKQW FT PLTEEKIKALTEICTDMEKEGKISRIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKNKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSTNNETPGI FT RYQYNVLPQGWKGSPAIFQHSMTKILEPFRSQNPEIIIYQYVDDLYVGSDLEIEQHRTK FT VEELRAHLLSWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIKLPEKESWTVNDIQKL FT VGKLNWASQIYPGIKVKQLCRLLRGTKALTEVVTMTEEA" XX SQ Sequence 1313 BP; 504 A; 231 C; 286 G; 292 T; 0 other; tcctcagagc agaccagagc caacagcccc accagcagag atctgtggga tgggggaaga 60 gagagtctct cctccgatgc aggagcagag agacaaggaa caggaccaac ccttaatttc 120 cctcaaatca ctctttggca acgacccgtt gtcacagtaa gaatagcagg acagctaaaa 180 gaagctctgt tagatacagg agcagatgat acagtattag aagatataaa tttgccaggg 240 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 300 cagatactta tagaaatttg tggaaaaaag gctataggta cagtattagt agggcctaca 360 cctgtcaaca taattgggag aaatatgttg acccagattg gttgtacttt aaattttcca 420 attagcccta ttcagcctgt accagtaaca ttaaaaccag gaatggatgg cccaaaggtt 480 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagaaatttg tacagatatg 540 gaaaaggaag gaaaaatctc aagaattggg cctgaaaatc catacaatac tccagtattt 600 gctataaaga aaaaagacag cactaaatgg aggaaactag tagatttcag agagctcaat 660 aaaagaaccc aggacttctg ggaagttcaa ttaggaatac cacatccagc aggattaaaa 720 aagaataaat cagtaactgt actagatgtg ggggacgcat atttttcagt acctttagat 780 gaaagcttta gaaagtatac tgcgttcacc atacctagta caaacaatga gacaccagga 840 ataagatatc agtacaatgt gctgccacag ggatggaaag gatcaccagc aatattccaa 900 catagcatga caaaaatcct agagcccttc agatcacaaa atccagaaat aattatctat 960 caatacgtgg atgacttgta tgtaggatct gatttagaaa tagagcagca tagaacaaaa 1020 gtagaggagt tgagagctca tctattgagc tgggggttaa ctacaccaga taaaaagcat 1080 cagaaagagc ctccatttct ttggatggga tatgaactac atcctgacaa atggacagtt 1140 cagcctatca agctgccaga aaaagaaagc tggactgtca atgatataca gaaattagtg 1200 ggaaaactaa attgggcaag tcagatttat ccaggaatta aagtaaagca actgtgtaga 1260 ctccttaggg gaactaaagc actaacagaa gtagtaacaa tgactgaaga agc 1313 // ID MK133207; SV 1; linear; genomic DNA; STD; VRL; 1325 BP. XX AC MK133207; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 3-B9 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1325 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1325 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 864a338f56a3f44cdd5d880fe6e60e37. XX FH Key Location/Qualifiers FH FT source 1..1325 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="3-B9" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1325 FT /gene="pol" FT CDS <1..>1325 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58045.1" FT /translation="SPEQARANSPTSRANSPTSRELWVRGDDPRPEARAEGQGSSFNFP FT QITLWQRPLVTVKIEGQLREALLDTGADDTVLEEITLLGKWKPKMIGGIGGFIKVRQYE FT QVTVEICGKRAVGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPK FT VKQWPLTEEKIKALTEICMDMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRE FT LNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNE FT TPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRVQNPEIVIYQYMDDLYVGSDLEIGQ FT HRTKIEELRTHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIKLPEKEAWTVND FT IQKLVGKLNWASQIYPGIKIKELCKLLRGPKALTDIVSMTEEA" XX SQ Sequence 1325 BP; 511 A; 228 C; 287 G; 299 T; 0 other; tctccagaac aggccagagc caacagcccc accagcagag ccaacagccc caccagcaga 60 gagctttggg ttcggggaga tgacccccgt cccgaagcaa gagccgaagg acaaggaagc 120 tcctttaact tccctcagat cactctttgg caacgacccc ttgttacagt aaaaatagag 180 ggacagttaa gggaagctct gttagataca ggagcagatg atacagtatt agaagaaata 240 actttattag gtaaatggaa accaaaaatg atagggggaa ttggaggttt tatcaaagta 300 agacagtatg agcaagtaac tgtagaaatt tgtggaaaaa gggccgtagg tacagtattg 360 gtagggccta cccctgttaa tataattgga aggaatttat tgactcaaat tgggtgcact 420 ttaaattttc caattagtcc tattgaaact gtaccagtaa aattaaaacc aggaatggat 480 ggcccaaaag ttaaacaatg gccattaaca gaagaaaaaa taaaagcatt aacagaaatt 540 tgtatggaca tggaaaaaga aggaaagatt tcaaaaattg ggcctgaaaa tccatataac 600 actccaatat ttgccataaa gaaaaaagat agtactaaat ggagaaaatt agttgatttt 660 agggaactca ataaaagaac tcaagacttc tgggaagttc aattaggaat accacatcca 720 gcagggttaa aaaagaagaa atcagtaaca gtactagacg tgggggatgc atatttttca 780 gtccctctag atgaggactt caggaagtat actgcattca ctatacctag tataaacaat 840 gagacaccag ggattagata tcagtataat gtgctaccac agggatggaa aggatcacca 900 gcaatattcc agagtagcat gacaaaaata ttagaaccat ttagggtaca aaacccagaa 960 atagtgatat accaatacat ggatgacttg tatgtgggat ctgacctaga aatagggcaa 1020 catagaacaa aaatagagga gttgagaact cacttgttga agtggggact taccacacca 1080 gacaaaaaac atcagaaaga acccccattt ctttggatgg ggtatgagct ccatcctgat 1140 aaatggacag tacaacctat aaagttgcca gaaaaagaag catggactgt caatgatata 1200 cagaagttag taggaaaatt aaattgggca agtcagattt atccagggat taaaataaaa 1260 gaactatgta aacttcttag gggacccaaa gcactaacag atatagtatc aatgactgaa 1320 gaagc 1325 // ID MK133208; SV 1; linear; genomic DNA; STD; VRL; 1304 BP. XX AC MK133208; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 3-H3 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1304 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1304 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; a947850670c4c8218bfab85795f19447. XX FH Key Location/Qualifiers FH FT source 1..1304 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="3-H3" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1304 FT /gene="pol" FT CDS <1..>1304 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58046.1" FT /translation="SSKQTRAISPTSRKLGGDNLLSEAGAEGQGTAPSFGFPQITLWQR FT PVVTVKVGGQLKEALLDTGADDTVLEDINLPGKWKPRMIGGIGGFIKVRQYDQILIEIC FT GKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFSISPIETVPVKLKPGMDGPKIKQWPLT FT EEKIKALTEICTEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQD FT FWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGVRYQ FT YNVLPQGWKGSPAIFQSSMIKILDPFRAKNPELVIYQYMDDLYVGSDLEIGQHRAKIEE FT LREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKEDWTVNDIQKLVGK FT LNWASQIYPGIKVKQLCKLIRGTKALTEIVPLTAEA" XX SQ Sequence 1304 BP; 499 A; 221 C; 284 G; 300 T; 0 other; tcctcaaagc agaccagagc catcagcccc accagcagaa agctgggagg agataacctc 60 ctctccgagg caggagcaga aggacaggga acagccccct cctttggttt ccctcaaatc 120 actctttggc aacgacccgt tgttacagta aaagtagggg gacagctaaa agaagctcta 180 ttagatacag gagcagatga tacagtatta gaagatataa atttgccagg aaaatggaag 240 ccaagaatga tagggggaat tggaggtttt atcaaagtaa gacagtatga tcagatactt 300 atagaaattt gtggaaaaaa ggctataggt acagtattgg taggacccac acctgtcaac 360 ataattggac gaaatatgtt gactcagatt ggttgtacat taaatttttc aattagtcct 420 attgaaactg taccagtaaa attaaagcca ggaatggatg gcccaaagat taagcaatgg 480 ccattgacag aagaaaaaat aaaagcatta acagaaattt gtacagagat ggaaaaagaa 540 ggaaaaattt caaaaatcgg gcctgaaaat ccatacaata ctccaatatt tgccataaag 600 aaaaaagata gtactaaatg gagaaaatta gtagatttca gagaacttaa taaaagaact 660 caagattttt gggaagttca attaggaata ccacatcctg ctgggttgaa aaagaaaaaa 720 tcagtaacag tattggatgt gggggatgca tatttttcag tcccattaga tgaagatttc 780 aggaagtaca ctgcatttac tatacctagt attaataatg agacaccagg ggttagatat 840 cagtataatg tgctaccaca gggatggaaa ggatcaccag caatcttcca gagtagcatg 900 ataaaaattt tagacccctt tagagccaaa aatccagaat tggttatata ccaatatatg 960 gatgatttgt atgtagggtc tgacctagaa atagggcaac acagagcaaa aatagaggaa 1020 ctaagagagc atctattgaa gtggggattt accacaccag acaaaaagca tcagaaagaa 1080 cccccatttc tgtggatggg gtatgaactc catcctgaca aatggacagt gcagcctata 1140 caactgccag acaaggaaga ctggactgtc aatgatatac agaaattggt aggcaaacta 1200 aattgggcaa gtcagatcta tccagggatt aaagtaaagc aattatgtaa actaattagg 1260 ggaacaaaag cactaacaga aatagtgcca ctaactgcag aagc 1304 // ID MK133209; SV 1; linear; genomic DNA; STD; VRL; 1316 BP. XX AC MK133209; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 3-I3 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1316 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1316 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 8edfb0fde44b61cd5d313e0522e01b2f. XX FH Key Location/Qualifiers FH FT source 1..1316 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="3-I3" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1316 FT /gene="pol" FT CDS <1..>1316 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58047.1" FT /translation="SSEQTGANSPTSSRSLWDGGRDSLLSETGTESQGTGPTFSFPQIT FT LWQRPLVTVKIGGQLKEALLDTGADDTVLEDINLPGKWKPRMIGGIGGFIKVRQYDQIP FT IEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIKTVPVQLKPGMDGPKVKQ FT WPLTEEKIKALTDICKEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNK FT RTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSTNNETPG FT IRYQYNVLPQGWKGSPAIFQGSMTKILEPFRSQNPEIVIYQYMDDLYVGSDLEIGQHRT FT KIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTVNDIQK FT LVGKLNWASQIYAGIKVKQLCKLLRGAKALTDVVTLTEEA" XX SQ Sequence 1316 BP; 499 A; 231 C; 288 G; 298 T; 0 other; tcctcagagc agaccggagc caacagcccc accagcagca gaagtctttg ggatggggga 60 agagatagtc tcctctctga aacaggaaca gaaagccaag gaacagggcc cacctttagt 120 ttccctcaaa tcactctttg gcaacgaccc cttgtcacag taaaaatagg aggacagcta 180 aaagaagctc tattagatac aggagcagat gatacagtat tagaagatat aaatttgcca 240 ggaaagtgga aaccaagaat gataggggga attggaggtt ttatcaaagt aaggcaatat 300 gatcagatac ctatagaaat ttgtgggaaa aaggctatag gtacagtgtt agtaggacct 360 acacctgtca acataattgg aagaaatatg ttgacccaga ttggttgtac tctaaatttt 420 ccaattagtc ctattaaaac tgtaccagta caattaaaac caggaatgga tgggccaaag 480 gttaaacaat ggccattgac agaagaaaaa ataaaagcat taacagacat ttgtaaagaa 540 atggaaaagg aaggaaaaat ttcaaaaatt ggacctgaaa atccatacaa tactccagtg 600 tttgctataa agaaaaaaga cagcactaaa tggagaaaat tagtagattt tagagagctc 660 aataaaagaa ctcaggattt ctgggaagtt cagttaggaa taccgcatcc agcaggttta 720 aaaaagaaaa aatcagtaac agtactagat gtgggggatg catatttttc agttcctcta 780 gatgaaagtt ttagaaaata tactgcattc accataccca gcacaaacaa tgagacacca 840 ggaattaggt atcagtacaa tgtgcttcca cagggatgga aaggatcgcc cgcaatattc 900 cagggtagca tgacaaaaat cttagagccc tttagatcac aaaatccaga aatagttatc 960 tatcaataca tggatgactt gtatgtagga tctgatttag aaataggaca gcatagaaca 1020 aaaatagagg agttgagagc tcatctattg agctgggggt ttactacacc agataaaaag 1080 catcagaaag aacctccatt tctttggatg gggtatgaac tacatcctga caaatggaca 1140 gtccagccta tacagctgcc agacaaggac agctggactg tcaatgacat acaaaaatta 1200 gtgggaaagc taaattgggc aagtcaaatt tatgcaggga ttaaagtaaa gcaactgtgc 1260 aaactcctca ggggagccaa agcactaaca gatgtagtaa cactgactga ggaagc 1316 // ID MK133210; SV 1; linear; genomic DNA; STD; VRL; 1301 BP. XX AC MK133210; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 3-I9 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1301 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1301 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 83df14347c1f716d82094c0778a6895e. XX FH Key Location/Qualifiers FH FT source 1..1301 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="3-I9" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1301 FT /gene="pol" FT CDS <1..>1301 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58048.1" FT /translation="PSEQARAISPTSRELQVRGDNPLAEAGAEGQGTLNFPQITLWQRP FT LVSIKIGGQTREALLDTGADDTVLEEINLSGKWKPKMIGGIGGFIKVRQYDQILIEICG FT KKAIGTVLVGPTPVNIIGRNMLTQLGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTE FT EKIKALTAICEEMEKEGKITKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDF FT WEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQY FT NVLPQGWKGSPAIFQSSMTKILEPFRAQNPEMVIYQYMDDLYVGSDLEIGQHRAKIEEL FT REHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKL FT NWASQIYPGIKVKQLCKLLRGTKALTDIVPLTEEA" XX SQ Sequence 1301 BP; 499 A; 235 C; 281 G; 286 T; 0 other; ccttcagaac aggccagagc catcagcccc accagcagag agcttcaggt tcgaggagac 60 aaccccctcg ccgaagcagg agcagaagga cagggaaccc ttaacttccc tcaaatcact 120 ctttggcagc gaccccttgt ctcaataaaa ataggaggcc agacaaggga ggctctttta 180 gatacaggag cagatgacac agtattagaa gaaataaatt tgtcaggaaa atggaaacca 240 aaaatgatag gaggaattgg aggttttatc aaagtaagac agtatgatca aatccttata 300 gaaatttgtg gaaagaaggc tataggtaca gtattagtag gacctacacc tgtcaacata 360 attggaagaa acatgttgac tcaactcggc tgcaccttaa attttccaat tagtcctatt 420 gaaactgtac cagtaaaatt aaagccagga atggatggcc caaaggttaa acaatggcca 480 ttgacagaag agaaaataaa agcattaaca gcaatttgtg aagaaatgga gaaggaagga 540 aaaattacaa aaattgggcc tgaaaatcca tataacactc caatatttgc cataaaaaag 600 aaggacagta ctaagtggag aaaattagta gatttcaggg agctcaataa aagaacccaa 660 gacttttggg aggttcaatt aggaatacca cacccagcag ggttaaaaaa gaaaaaatca 720 gtgacagtac tggatgtggg ggatgcatat ttttcagttc ctttagatga agacttcagg 780 aaatatactg cattcaccat acctagtata aataatgaaa caccagggat tagatatcaa 840 tataatgtgc ttccacaagg gtggaaagga tcaccagcaa tattccagag tagcatgaca 900 aaaatcttag agccctttag ggcacaaaac ccagaaatgg tcatctatca atatatggat 960 gacttatatg taggatctga cttagaaata gggcaacata gagcaaaaat agaggagtta 1020 agagaacact tattgaagtg gggatttacc acaccagaca agaaacatca gaaagaaccc 1080 ccatttcttt ggatggggta tgaactccat cctgacaaat ggacagtaca gcctatacag 1140 ttaccagaaa aggatagctg gactgtcaat gatatacaga agttagtggg aaaattaaat 1200 tgggcaagtc agatttatcc agggattaaa gtaaagcaac tatgtaaact ccttagggga 1260 accaaagcac tgacagacat agtaccacta actgaagaag c 1301 // ID MK133211; SV 1; linear; genomic DNA; STD; VRL; 1310 BP. XX AC MK133211; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 3-H1 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; bacf164304b767afc7e8865a37629c37. XX FH Key Location/Qualifiers FH FT source 1..1310 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="3-H1" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1310 FT /gene="pol" FT CDS <1..>1310 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58049.1" FT /translation="PSEQARANSPTRRELRNERGGSLLSEAGTEGQGTISSCFPQITLW FT QRPLVTVRIGGQLIEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYDQIAIE FT IEGKKAIGTVLVGPTPINIIGRNMLTQIGCTLNFPISPIKTVPVKLKPGMDGPKVKQWP FT LTEEKIKALTEICNDMEKEGKISRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRT FT QDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDENFRKYTAFTIPSINNETPGIR FT YQYNVLPQGWKGSPAIFQDSMTRILEPFRAKNPEIVIYQYMDDLYVGSDLEIEQHRAKI FT EDLREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIELPDKEDWTVNDIQKLV FT GKLNWASQIYPGIRIKQLCKLLRGTKALTDIVPLTAEA" XX SQ Sequence 1310 BP; 511 A; 229 C; 278 G; 292 T; 0 other; ccttcagaac aggctagagc caacagcccc acccgcagag agcttcgaaa cgaaagagga 60 ggtagtctcc tctccgaagc aggaactgag ggacaaggaa ccatatcctc ctgtttccct 120 caaatcactc tttggcagcg acccctagtc acagtaagaa tagggggaca gctaatagaa 180 gccctattag acacaggggc agatgataca gtattagaag aaatcaattt accaggaaaa 240 tggaaaccaa aaatgatagg gggaattgga ggttttatca aagtaagaca atatgatcaa 300 atagctatag aaattgaggg aaaaaaggct atagggacag tattagtagg accaacacct 360 atcaacataa ttggaagaaa tatgttgact cagattggtt gtactttaaa ttttccaatt 420 agtcctatta aaactgtacc tgtaaaatta aagccaggaa tggatggccc aaaggttaaa 480 caatggccat tgacagaaga aaaaataaaa gcattaacag aaatttgcaa tgatatggaa 540 aaagaaggaa aaatttcaag aattgggcct gaaaatccat ataacacccc aatatttgct 600 ataaagaaaa aagacagtac taagtggaga aaattagtag atttcagaga gcttaataaa 660 agaactcaag acttctggga ggtccaattg ggaatacctc atcctgcagg attaaaaaag 720 aaaaaatcag taacagtact agatgtgggg gatgcatatt tttcagttcc cttagatgaa 780 aactttagaa agtatactgc attcaccata cctagtataa ataatgagac accagggatt 840 agatatcagt acaatgtgct tccacaggga tggaaaggat caccagcaat atttcaggat 900 agcatgacaa gaatcttaga gccctttaga gcaaaaaatc cagaaatagt aatctaccaa 960 tacatggatg atctgtatgt aggatctgac ttagaaatag agcagcatag agcaaaaata 1020 gaggatttga gagaacatct actgaaatgg ggatttacca caccagataa aaaacatcag 1080 aaagaacctc cattcctttg gatgggatat gaactccatc ctgacaaatg gacagtacag 1140 ccaatagagc tgccagataa ggaagactgg actgtcaatg atatacaaaa gttagtggga 1200 aagctaaatt gggcaagtca gatttatcca ggaattagaa taaaacagtt atgcaagctc 1260 cttaggggga ccaaagcact aacagacata gtgccactga ctgcagaagc 1310 // ID MK133212; SV 1; linear; genomic DNA; STD; VRL; 1310 BP. XX AC MK133212; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 3-B2 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 18688c2233df924b1075f8d04882e973. XX FH Key Location/Qualifiers FH FT source 1..1310 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="3-B2" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1310 FT /gene="pol" FT CDS <1..>1310 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58050.1" FT /translation="PSEQTRANSPTSRELQVRRGDSLLSEAGEEGQGSCSLGFPQITLW FT QRPLVTVKVGGQMREALLDTGADDTVLEEINLPGRWKPKMIGGIGGFIKVRQYEQITIE FT ICGKQAIGTVLVGPTPVNIIGRNMLTQLGCTLNFPISPIETVPVKLKPGMDGPKVKQWP FT LTEEKIKALTEICREMEKEGKITRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRT FT QDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIR FT YQYNVLPQGWKGSPAIFQSSMTKILEPFRTQNPEIVIYQYMDDLYVGSDLEIGQHRVKI FT EELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKEDWTVNDIQKLV FT GKLNWASQIYPGIKVKNLCKLLRGTKALTDIVTLTEEA" XX SQ Sequence 1310 BP; 505 A; 225 C; 286 G; 294 T; 0 other; ccttcagaac agaccagagc caacagcccc accagcagag agcttcaggt tcgaagaggg 60 gacagcctcc tctctgaagc aggagaggaa gggcaaggat cctgctccct tggattccct 120 caaatcactc tttggcaacg acctcttgtc acagtaaaag tagggggaca aatgagggaa 180 gctctattag atacaggagc agatgataca gtactagaag aaataaattt gccaggaagg 240 tggaaaccaa aaatgatagg gggaattgga ggttttatca aagtcagaca atatgagcaa 300 ataactatag aaatttgtgg aaaacaggct ataggtacag tattagtagg acctacacct 360 gtcaatataa ttggaagaaa catgttgact cagcttggtt gtactctaaa ttttccaatt 420 agccctattg aaactgtacc tgtaaaatta aagccaggaa tggatggccc aaaagttaaa 480 caatggccat tgacagaaga gaaaataaaa gcattgacag aaatttgcag agaaatggaa 540 aaggaaggaa aaattacaag aattgggcct gaaaacccat acaatactcc aatatttgcc 600 ataaaaaaga aggacagtac taagtggaga aaattagtag atttcagaga actcaataaa 660 agaactcaag atttctggga agttcaatta ggaataccac acccagcagg gttaaaaaag 720 aaaaaatcag taacagtact agatgtggga gatgcatatt tttcagttcc tttagataaa 780 gactttagaa agtatactgc atttaccata cctagtataa acaatgaaac accagggatt 840 agatatcaat ataatgtgct tccacaggga tggaaaggat caccagcaat atttcagagt 900 agcatgacaa aaattttaga gccctttagg acacaaaacc cagaaatagt tatctatcaa 960 tatatggatg acctgtatgt aggatctgac ttagaaatag ggcaacatag agtaaagata 1020 gaggaattaa gagaacactt gttaaggtgg gggtttacca ccccagacaa gaaacatcag 1080 aaagaacccc catttctttg gatggggtat gagctccacc cagataaatg gacagtacag 1140 cctatacagt taccagagaa agaagactgg actgtcaatg atatacaaaa gctagtggga 1200 aaattaaact gggcaagtca aatttatcca gggattaaag taaagaattt gtgtaagctc 1260 cttagaggaa ctaaggcact gacagacata gtaacactga ctgaagaagc 1310 // ID MK133213; SV 1; linear; genomic DNA; STD; VRL; 1301 BP. XX AC MK133213; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 3-D4 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1301 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1301 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 9ac67c2423ca9ded5b582dea20c4991f. XX FH Key Location/Qualifiers FH FT source 1..1301 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="3-D4" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1301 FT /gene="pol" FT CDS <1..>1301 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58051.1" FT /translation="SPERTGANSPTSRDLWDGGRPLPEAGAEGQGTSFSFPQITLWQRP FT LVTVKIGGQLKEALLDTGADDTVLEEIDLPGKWKPKMIGGIGGFIKVRQYDQVPLEICG FT KKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTE FT EKIKALTEICNEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDF FT WEVQLGIPHPAGLRKKKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSINNETPGIRYQY FT NVLPQGWKGSPAIFQSSMTKILEPFRTRNPDITIYQYMDDLYVGSDLEIGQHREKIEEL FT REHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIKLPEKDSWTVNDIQKLVGKL FT NWASQIYKGIKVRQLCKLLRGAKALTDIVPLTEEA" XX SQ Sequence 1301 BP; 490 A; 224 C; 293 G; 294 T; 0 other; tccccagaac ggactggagc caacagcccc accagcagag atctttggga tgggggacga 60 cccctccccg aagcaggagc agaaggacag ggaacctcct ttagtttccc tcaaatcact 120 ctttggcaac gaccccttgt tacagtaaaa ataggaggac agttaaaaga agctctatta 180 gacacaggag cagatgatac agtattagag gaaatagatc ttccaggaaa atggaagcca 240 aaaatgatag ggggaattgg aggttttatc aaagtaagac agtatgatca ggtaccttta 300 gaaatttgtg ggaaaaaggc tataggtaca gtattagtag gacctacacc tgtcaacata 360 attggaagaa acatgttgac tcagattggt tgtactttaa attttccaat tagtcctatt 420 gaaactgtac cagtaaaatt aaagccagga atggatggcc caaaggttaa acaatggcca 480 ttgacagaag aaaaaataaa agcattaaca gaaatttgta atgagatgga aaaggaagga 540 aaaatttcaa aaattgggcc tgaaaatcca tacaatactc cagtatttgc tataaagaaa 600 aaggacagta ctaaatggag aaaactagta gatttcaggg aactcaataa aagaacccaa 660 gatttttggg aagttcagtt aggaatacca cacccagcag ggttaagaaa aaagaaatca 720 gtaacagtac tggatgtggg ggacgcatat ttttcagttc ctttagatga aagctttagg 780 aagtatactg cgttcaccat acctagtata aacaatgaaa caccagggat tagatatcaa 840 tataatgtgc ttccacaggg atggaaggga tcaccagcaa tatttcagag tagcatgaca 900 aaaatcttag agccctttag gacaagaaac ccagacataa ctatctatca atatatggat 960 gacttgtatg taggatctga tttagaaata gggcaacata gagaaaaaat agaggagttg 1020 agggaacatc tattgaagtg ggggcttacc acaccagaca agaaacatca gaaagaaccc 1080 ccatttcttt ggatgggata tgaactccat cctgacaaat ggacagtcca acctataaaa 1140 ctgccagaaa aggatagctg gactgtcaat gatatacaga agttggtggg aaaattaaat 1200 tgggcaagtc agatttataa agggattaaa gtaaggcaac tgtgcaaact ccttagggga 1260 gccaaagcac tgacagacat agtaccactg actgaggaag c 1301 // ID MK133214; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133214; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 3-G2 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 921485b5754bc86c4ab57cc7af6a9bbd. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="3-G2" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58052.1" FT /translation="SSEQTGAISPTSRSSRNEGRDNLPSEAGAEGQGTAPSFSFPQITL FT WQRPVVTVKIGGQIKEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYDQILI FT EICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISHIETVPVKLKPGMDGPRVKQW FT PLTEEKIKALTEICMDMEKEGKISRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGI FT RYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPEIVIYQYMDDLYVGSDLEIGQHRTK FT IEELREHLLGWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPSKESWTVNDIQKL FT VGKLNWASQIYPGIKVKQLCRLLRGTKALTDIVPLTAEA" XX SQ Sequence 1313 BP; 497 A; 224 C; 289 G; 303 T; 0 other; tcctcagagc agaccggagc catcagcccc accagcagat cttctcggaa tgagggaaga 60 gataacctcc cctccgaagc aggagcagag ggacagggaa cagccccctc ctttagtttc 120 cctcaaatca ctctttggca acgacccgtt gtcacagtaa aaataggagg gcagataaag 180 gaagctctat tagacacagg agcagatgat acagtattag aagaaataaa tttgccagga 240 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 300 cagatactca tagaaatttg tggaaaaaag gctataggta cagtattggt aggacctaca 360 cctgtcaaca taattggacg aaatatgttg actcagattg gttgtacttt aaattttcca 420 attagtcata ttgaaactgt gccagtaaaa ttaaagccag gaatggatgg cccaagggtt 480 aaacaatggc cattaacaga agaaaaaata aaagcattaa cagaaatttg tatggacatg 540 gagaaggaag gaaaaatttc aagaataggg cctgaaaatc catataatac tccaatattt 600 gccataaaga aaaaagatag tactaaatgg agaaaattag tagattttag agaacttaat 660 aaaagaactc aggatttttg ggaagtccaa ttaggaatac cacatcctgc tgggttaaag 720 aagaaaaaat cagtaacagt gttggatgtg ggggatgcat atttttcagt ccctctagat 780 gaagatttta ggaagtatac tgcatttact atacctagca ttaataatga gacaccaggg 840 attagatatc agtacaatgt gctaccgcag ggatggaaag gatcaccagc aatattccag 900 agtagcatga caaaaatctt agaacccttt agagcaaaaa atccagaaat agtcatatac 960 cagtacatgg atgatttgta tgtagggtct gacttagaaa tagggcagca tagaacaaaa 1020 atagaagaac taagagaaca tctattagga tggggattta ccactccaga caaaaagcat 1080 cagaaagaac ccccatttct ttggatgggg tatgaactcc atcctgacaa atggacagta 1140 cagcctatac aattgccaag caaggaaagc tggactgtca atgatataca gaaattagtg 1200 ggaaaactaa attgggcaag tcaaatttat ccagggatta aagtaaagca attatgtagg 1260 ctccttaggg gaaccaaggc gctaacagac atagtgccac taactgcaga agc 1313 // ID MK133215; SV 1; linear; genomic DNA; STD; VRL; 1304 BP. XX AC MK133215; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 3-C1 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1304 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1304 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; cf6d284760f9bdf89db087ff89ff063a. XX FH Key Location/Qualifiers FH FT source 1..1304 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="3-C1" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1304 FT /gene="pol" FT CDS <1..>1304 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58053.1" FT /translation="PSEQARANSPTSREPQFRGDNLSEAGAERQGACSLSFPQITLWQR FT PLVSITVEGQQREALLDTGADDTVLEDINLPGRWKPKMIGGIGGFIKVRQYDQITIEIC FT GKKAIGTVLVGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLT FT EEKIKALTAICEEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQD FT FWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSTNNETPGIRYQ FT YNVLPQGWKGSPAIFQSSMTKILEPFRAKNPEIVIYQYMDDLYVGSDLEIGQHRAKIEE FT LRTHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPNKESWTVNDIQKLVGK FT LNWASQIYPGIKVRQLCKLLRGAKALTDVIPLTEEA" XX SQ Sequence 1304 BP; 490 A; 240 C; 288 G; 286 T; 0 other; ccttcagaac aggccagagc caacagcccc accagcagag aaccccaatt tcgaggagat 60 aacctctccg aggcaggagc agaaagacaa ggagcctgct cccttagttt ccctcaaatc 120 actctttggc aacgacccct tgtctcaata acggtggagg gacaacaaag ggaggctctc 180 ttagatacag gagcagatga tacagtatta gaagatataa atttgccagg gagatggaaa 240 ccaaaaatga taggaggaat tggaggtttt atcaaagtaa gacaatatga tcaaataact 300 atagaaattt gtggaaaaaa ggctataggt acagtattag taggacctac acctgtcaac 360 ataattggca gaaatctgtt gacccagctt ggctgtacac taaattttcc aattagtcct 420 attgaaactg taccagtaaa attaaagcct ggaatggatg gcccaaaggt taaacaatgg 480 ccattgacag aagagaaaat aaaagcatta acagcaattt gtgaggagat ggagaaggaa 540 ggaaaaatta caaaaattgg gcctgaaaat ccatataaca ctccagtatt tgccataaaa 600 aagaaggaca gtactaagtg gagaaaatta gtagatttca gggaactcaa taaaagaact 660 caagactttt gggaggttca attaggaata ccacacccag cagggttaaa aaagaaaaaa 720 tcagtaacag tgctggatgt gggggatgca tatttttcag ttcctttaga taaagatttt 780 aggaagtata ctgcctttac catacctagt acaaacaatg aaacaccagg gattagatat 840 caatataatg tgctcccaca gggatggaaa ggatcaccag caatattcca gagtagtatg 900 acaaaaatct tagaaccctt tagggcaaaa aacccagaga tagttatcta tcaatatatg 960 gatgacttgt atgtaggatc tgacttagag atagggcaac atagagcaaa aatagaagag 1020 ttgagaacac atctgctgaa gtggggattg accaccccag acaagaaaca tcagaaagaa 1080 cccccatttc tttggatggg gtatgaactc catcctgaca aatggacagt acagcctata 1140 cagctaccaa acaaggagag ctggactgtc aatgatatac agaagttagt gggaaaatta 1200 aactgggcaa gtcagattta cccagggatt aaagtaaggc aactatgcaa actccttagg 1260 ggagccaaag cgctaacaga cgtaatacca ctgactgaag aagc 1304 // ID MK133216; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133216; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 4-D5 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 43ea355c16c9fb54ddbab2d971a8526d. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="4-D5" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58054.1" FT /translation="SSEQTGANSPTSRELGDEGRDNPLSEAGTERQGTAPSFSFPQITL FT WQRPIVTVRIEGQLKEALLDTGADDTVLENLDLPGKWKPKMIGGIGGFIKVRQYDQILI FT EICGQRAIGTVLVGPTPINIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQW FT PLTEEKIKALTEICNEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGI FT RYQYNVLPQGWKGSPAIFQSSMTKILEPFRARYPEIVIYQYMDDLYVGSDLEIGQHREK FT IEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIMLPEKESWTVNDIQKL FT VGKLNWASQIYPGIKVKQLCKLLRGAKALTDIVTLTEEA" XX SQ Sequence 1313 BP; 498 A; 224 C; 292 G; 299 T; 0 other; tcctcagagc agactggagc caacagcccc accagcagag aacttgggga tgagggaaga 60 gacaaccccc tctctgaagc aggaacagaa agacagggaa cagccccctc ctttagtttc 120 cctcaaatca ctctttggca acgacccatt gtcacagtaa gaatagaagg acagctaaaa 180 gaagccttat tagatacagg agcagatgat acagtattag aaaacctaga tttgccagga 240 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 300 cagatactta tagagatttg tgggcaaagg gcaataggta cagtattggt aggacctaca 360 cctatcaaca taattgggag gaatatgttg actcagattg gttgtacttt aaattttcca 420 attagtccta ttgaaactgt accagtgaaa ttaaagccag gaatggatgg cccaaaagtt 480 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagaaatctg taatgagatg 540 gaaaaggaag gaaaaatttc aaaaataggg cctgaaaatc catataatac tccagtattt 600 gctataaaga aaaaggatag cacaaaatgg aggaaattag tagattttag agaactcaat 660 aagagaactc aggacttttg ggaagttcaa ttagggatac cgcatccagc gggcttaaaa 720 aagaaaaaat cagtaacagt actagatgtg ggggatgcat atttttcagt tcctttagat 780 gaggatttca ggaagtatac tgcattcacc atacctagta taaacaatga gacaccagga 840 atcaggtatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccag 900 agtagcatga caaaaatctt agaacccttt agagcaagat atccagaaat agttatctat 960 caatacatgg atgacttata tgtaggatct gatttagaga taggacaaca tagagaaaaa 1020 atagaggaac tgagagctca tctattgagt tgggggttta ctacaccaga caaaaaacac 1080 cagaaagaac ctccatttct ttggatggga tatgaactcc atcctgacaa atggacagtg 1140 cagcctataa tgctaccaga aaaggagagc tggactgtca atgatataca gaaattagtg 1200 ggaaaactaa attgggcaag tcagatttat ccagggatta aagttaagca actgtgtaaa 1260 ctcctcaggg gagccaaagc gctaacagat atagtaacac tgactgagga agc 1313 // ID MK133217; SV 1; linear; genomic DNA; STD; VRL; 1343 BP. XX AC MK133217; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 4-A5 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1343 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1343 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; db5af6d1edb08577683172be78009175. XX FH Key Location/Qualifiers FH FT source 1..1343 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="4-A5" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1343 FT /gene="pol" FT CDS <1..>1343 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58055.1" FT /translation="PSEQTRTNSPTSRELQVQTRTNSSTSRELQVRGDIPPSEAGAEGQ FT GSLNFPQITLWQRPLVSIKVAGQLKEALLDTGADDTVLEEIKLPGNWKPRMIGGIGGFI FT KVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNFPISPIETVPVKLKP FT GMDGPKVKQWPLTEEKIKALTAICEEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRK FT LVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDESFRKYTAFTI FT PSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRVKNPEIVIYQYMDDLYVGS FT DLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKD FT SWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTDIVTLTEEA" XX SQ Sequence 1343 BP; 514 A; 249 C; 293 G; 287 T; 0 other; ccttcagagc agaccagaac caacagcccc accagcagag agctccaggt tcagaccaga 60 accaacagct ccaccagcag agagcttcag gttcgaggag acatcccccc ctcagaagca 120 ggagcagagg gacaaggaag ccttaacttc cctcaaatca ctctttggca gcgaccactt 180 gtctcaataa aggtagcagg tcagctaaag gaggctctct tagacacagg agcagatgat 240 acagtattag aagaaataaa attgccagga aattggaaac caagaatgat agggggaatt 300 ggaggtttta tcaaagtaag acagtatgat caaattctca tagaaatttg tggaaaaaag 360 gctataggta cagtattagt aggacctaca cctgtcaaca taattggaag aaatatgttg 420 actcagcttg ggtgcacact aaattttcca attagtccca ttgaaactgt accagtaaaa 480 ttaaagccag gaatggatgg cccaaaggtc aaacaatggc cattaacaga agagaaaata 540 aaagcattaa cagcaatttg tgaagaaatg gaaaaggaag gaaaaattac aaaaattggg 600 cctgaaaatc catataacac tccagtattt gcaataaaaa agaaggatag tactaagtgg 660 agaaaattag tagatttcag ggaactcaat aaaagaactc aagacttttg ggaagttcaa 720 ttagggatac cccacccggc agggttaaaa aagaagaaat cagtgacagt actggatgtg 780 ggggatgcat atttttcagt ccctttagat gaaagcttca ggaaatatac tgcattcacc 840 atacctagta caaacaatga aacaccaggg attagatatc aatacaatgt gcttccacag 900 ggatggaaag gatcaccagc aatattccag agtagcatga caaaaatctt agagcccttt 960 agggtaaaaa atccagaaat agttatctat caatatatgg atgacttata cgtaggatct 1020 gacttagaaa taggacaaca tagagcaaaa atagaggagt tgagagaaca tttattaaag 1080 tggggattta ccacaccaga caagaaacat cagaaagaac ccccatttct ttggatgggg 1140 tatgaactcc atcctgacaa atggacagta cagcctatac agctgccaga aaaggatagc 1200 tggactgtca atgatataca gaagttagtg ggaaaattaa actgggcaag tcagatttac 1260 ccagggatta aagtaaggca actatgtaaa ctccttaggg gagccaaagc actaacagac 1320 atagtaacac tgactgaaga agc 1343 // ID MK133218; SV 1; linear; genomic DNA; STD; VRL; 1307 BP. XX AC MK133218; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 4-B9 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1307 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1307 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 83039876d3e76866f11533004f2ccd92. XX FH Key Location/Qualifiers FH FT source 1..1307 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="4-B9" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1307 FT /gene="pol" FT CDS <1..>1307 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58056.1" FT /translation="SSEQTRANSPTSRDLRVRGGESPLPEAGAEGGAISSSFPQITLWQ FT RPLVTVRIGGSLIEALLDTGADDTVLTEIDLPGRWKPKMIGGIGGFIKVRQYDNMTMEI FT EGKKATGTVLIGPTPVNIIGRNMLTQIGCTLNFPISPIDTVPVKLKPGMDGPKVKQWPL FT TEEKIKALTEICADMEKEGKISRIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQ FT DFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDENFRKYTAFTIPSVNNETPGIRY FT CYYVLPQGWKGSPAIFQSSMTKILDPFRTKNPEIVIYQYMDDLYVGSDLEIGQHREKVE FT ELRKHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKESWTVNDIQKLVG FT KLNWASQIYPGIKVKQLCKLLKGAKALTDIVPMTAEA" XX SQ Sequence 1307 BP; 497 A; 237 C; 288 G; 285 T; 0 other; tcttcagagc agaccagagc caacagcccc accagcagag atcttcgggt tcggggagga 60 gaaagccccc tccccgaagc aggagccgaa ggaggagcta tatcctctag cttccctcaa 120 atcactcttt ggcaacgacc cttagtcaca gtaagaatag ggggaagtct aatagaagcc 180 ctattagata caggagcaga tgatacagta ttaacagaaa tagatttgcc aggaagatgg 240 aaaccaaaaa tgataggggg aattggaggt tttatcaaag taagacagta tgataacatg 300 accatggaaa ttgagggaaa aaaggctaca ggcacagtat taataggacc cacacctgtc 360 aatataattg gaagaaatat gttgactcaa attggttgca ctttaaattt tccaatcagt 420 cctattgaca ctgtgccagt aaaattaaag ccaggaatgg atggcccaaa agttaaacaa 480 tggccattga cagaagaaaa aataaaagca ttaacagaaa tttgtgcaga catggaaaag 540 gaaggaaaaa tttcaaggat tgggcctgaa aacccatata acactccagt gtttgctata 600 aagaaaaaag acagcactaa atggagaaaa ttagttgatt ttagagaact caataaaaga 660 actcaagact tctgggaagt tcaattagga ataccacatc cggcagggtt aaaaaagaaa 720 aaatcagtaa cagtgctgga tgtgggggat gcatattttt cagttcctct agatgaaaat 780 ttcaggaagt atactgcatt cactatacct agtgtaaaca atgagacacc agggattaga 840 tattgttact atgtgctacc acagggttgg aaaggatcac cagcaatatt ccagagtagc 900 atgacaaaaa tcttagaccc attcagaaca aaaaacccag aaatagttat ttatcaatac 960 atggatgact tgtatgtggg atctgactta gaaatagggc agcatagaga aaaggtagag 1020 gaactgagaa agcatctatt gaagtgggga ctcaccacac cagacaaaaa acaccaaaaa 1080 gaacctccat tcctttggat ggggtatgaa ctccatcctg acaaatggac ggtacagcct 1140 atacagctgc cagataagga aagctggact gtcaatgaca tacaaaagtt agtgggaaaa 1200 ctaaattggg caagtcagat ttatccagga attaaagtaa agcaattatg taaactcctc 1260 aagggggcaa aagcactaac agacatagta ccaatgactg cagaagc 1307 // ID MK133219; SV 1; linear; genomic DNA; STD; VRL; 1328 BP. XX AC MK133219; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 4-C9 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1328 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1328 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; cc635552bd64b217418068a52fc87ac1. XX FH Key Location/Qualifiers FH FT source 1..1328 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="4-C9" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1328 FT /gene="pol" FT CDS <1..>1328 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58057.1" FT /translation="PSEPTRANSPTESTRANSSTSRELQVRGDNSHSEAGGKGQRTLNC FT PQITLWQRPLVTIKVGGQIKEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQY FT DQISIEICGKKAIGTVLVGPTPVNIIGRNLLTQLGCTLNFPISPIETVPVKLKPGMDGP FT KVKQWPLTEEKIKALTAICEEMEKEGKITKIGPENPYNTPIFAIKKKDSTKWRKLVDFR FT ELNKRTQDFWEVQLGIPHPAGLKQKKSVTVLDVGDAYFSVPLDKEFRKYTAFTIPSINN FT ETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRAQNPDIVIYQYMDDLYVGSDLEIG FT QHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVN FT DIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTDIVPLTEEA" XX SQ Sequence 1328 BP; 512 A; 245 C; 287 G; 284 T; 0 other; ccttcagagc cgaccagagc caacagcccc acagagtcaa ctagagccaa cagctccacc 60 agcagagagc ttcaggttcg aggagacaac tcccactctg aagcaggagg caaaggacag 120 agaaccctta actgccctca aatcactctt tggcagcgac cccttgtcac aataaaagta 180 gggggccaga taaaggaggc tctcttagac acaggagcag atgatacagt attagaggaa 240 ataaatttgc cagggaaatg gaaaccaaaa atgatagggg gaattggagg ttttatcaaa 300 gtaagacagt atgatcaaat atctatagaa atctgtggaa aaaaggctat aggtacagta 360 ttagtaggac ctacacctgt caacataatt ggaaggaatc tgttgactca acttggatgt 420 acactaaatt ttccaattag tcctattgaa actgtaccag taaaattaaa gccaggaatg 480 gatgggccaa aggttaaaca atggccattg acagaagaaa aaataaaagc attaacagca 540 atttgtgaag agatggaaaa agaaggaaaa attacaaaaa ttgggcctga aaatccgtat 600 aatactccaa tatttgccat aaaaaagaag gacagtacta agtggagaaa attagtagat 660 ttcagggagc tcaataaaag aactcaagac ttttgggagg ttcaattagg aataccacac 720 ccagcagggt taaaacagaa aaaatcagtg acagtactgg atgtggggga tgcatatttt 780 tcagttcctt tagataaaga gttcaggaaa tatactgcat tcaccatacc tagtataaac 840 aatgaaacac caggaattag atatcagtac aatgtgctcc cacagggatg gaaaggatcc 900 ccagcaatat tccaggctag catgacaaaa attctagaac cctttagagc acaaaaccca 960 gacatagtta tctatcaata tatggatgac ttgtatgtag gatctgattt agaaataggc 1020 caacacagag caaaaataga agaattaagg gaacatctat tgaaatgggg attcaccaca 1080 ccagacaaga aacatcagaa agaaccccca tttttgtgga tggggtatga actccatccg 1140 gacaaatgga cagtacaacc tatagtactg ccagaaaagg atagctggac agtcaatgat 1200 atacagaagt tagtgggaaa attaaactgg gcaagtcaga tttacccagg aattaaggta 1260 aagcaactgt gtaaactcct taggggaacc aaagcactaa cagatatagt accactgact 1320 gaagaagc 1328 // ID MK133220; SV 1; linear; genomic DNA; STD; VRL; 1322 BP. XX AC MK133220; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 4-H7 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1322 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1322 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; b512c5c499673723e4acd4c5977ea2cd. XX FH Key Location/Qualifiers FH FT source 1..1322 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="4-H7" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1322 FT /gene="pol" FT CDS <1..>1322 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58058.1" FT /translation="PSEQTRANSPTSRELRVWGGGNSLGNPLSETGAERPGTVSFSFPQ FT ITLWQRPLVTIKIGGQIKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQ FT ITLEICGHKAMGTVLIGPTPVNIIGRNLLTQIGCTLNFPISPVETVPVKLKPGMDGPKV FT KQWPLTEEKIKALVEICTEMEKEGKISKVGPENPYNTPIFAIKKKDSTKWRKLVDFREL FT NKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLYEDFRKYTAFTIPSINNET FT PGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEMVIYQYMDDLYVGSDLEIGQH FT RTKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKESWTVNDI FT QKLVGKLNWASQIYPGIKVKQLCKLIRGTKALTKIVPLTKKA" XX SQ Sequence 1322 BP; 517 A; 227 C; 277 G; 301 T; 0 other; ccttcagagc agaccagagc caacagcccc accagcagag agcttcgggt ttggggagga 60 ggtaactcac tcggtaaccc cctctcagaa acaggagcag aaagaccagg aactgtatcc 120 ttcagcttcc ctcaaatcac tctttggcaa cgaccccttg ttacaataaa aataggggga 180 cagataaagg aagctctatt agatacagga gcagatgata cagtattaga agaaatgaat 240 ttgccaggaa aatggaaacc aaaaatgata ggaggaattg gaggctttat caaagtaaga 300 cagtatgatc aaataacttt agaaatctgt ggacataaag ctatgggtac agtattaata 360 ggacctacac ctgtcaacat aattggaaga aatttgttga ctcagattgg ctgcacttta 420 aattttccaa taagtcctgt tgaaactgta cccgtaaaat taaagccagg gatggatggc 480 ccaaaagtta aacagtggcc attgacagaa gaaaaaataa aagcattagt agaaatttgt 540 acagaaatgg aaaaggaagg aaaaatttca aaagttgggc ctgaaaatcc atataatact 600 ccaatatttg ctataaagaa aaaagacagt actaagtgga gaaaattggt agatttcaga 660 gaacttaata agaggactca agacttctgg gaagttcaac taggaatacc acatcctgca 720 gggctaaaaa agaaaaaatc agtaacagta ctggatgtgg gtgatgctta tttttcagtt 780 cccttatatg aagactttag aaagtatact gcattcacca tacctagtat aaacaatgag 840 acaccaggag ttaggtatca gtacaatgtg cttccacaag gatggaaagg atcaccagca 900 atattccaaa gtagcatgac aaaaatctta gaacctttta gaaagcaaaa cccagaaatg 960 gttatctacc aatatatgga tgatttgtat gtaggatctg acttagaaat agggcagcat 1020 agaacaaaaa tagaggaatt aagggaacat ttactgaggt ggggatttac cacaccagac 1080 aaaaagcatc agaaagaacc tccatttcta tggatgggat atgaactcca tcctgataaa 1140 tggacagtac agcctataca actgccagaa aaggaaagct ggactgtcaa tgatatacag 1200 aaattagtgg ggaaattaaa ttgggcaagc caaatttatc caggaatcaa ggtaaaacaa 1260 ttatgtaaac tcattagggg aacaaaagca ctgacaaaaa tagtaccact gacaaaaaaa 1320 gc 1322 // ID MK133221; SV 1; linear; genomic DNA; STD; VRL; 1316 BP. XX AC MK133221; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 4-G5 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1316 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1316 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 11dce25422efdcaaac1d818e6380950a. XX FH Key Location/Qualifiers FH FT source 1..1316 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="4-G5" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1316 FT /gene="pol" FT CDS <1..>1316 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58059.1" FT /translation="SAEQTGANSSTSRELRVRRGDSPLPEARTEGEGRGEGAISLPQIT FT LWQRPLVTVRIGGQLIEALLDTGADDTVLEDINLQGKWKPKMIGGIGGFIKVRQYDQIP FT IEICGKRAIGTVLVGPTPINIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQ FT WPLTEEKIKALTEICKEMEEEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNK FT RTQDFWEVQLGIPHPAGLKEKKSVTVLDVGDAYFSVPLDKEFRKYTAFTIPSKNNETPG FT IRYQYNVLPQGWKGSPAIFQASMTKILEPFRKNNPEIEIYQYMDDLYVGSDLEIGQHRA FT KVEELRKHLLEWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKESWTVNDIQK FT LVGKLNWASQIYAGIKVKQLCKLIRGAKALTDIVPLTAEA" XX SQ Sequence 1316 BP; 512 A; 229 C; 291 G; 284 T; 0 other; tctgcagaac agaccggagc caacagctcc accagcagag agcttcgggt tcggagaggg 60 gatagccccc tccctgaagc cagaaccgaa ggagaaggaa gaggagaagg ggctatatcc 120 ctccctcaaa tcactctttg gcaacgaccc ttagtcacag taagaatagg gggacagcta 180 atagaagccc tattagacac aggagcggat gatacagtat tagaagatat aaatttgcaa 240 ggaaaatgga aaccaaaaat gataggggga attggaggtt ttatcaaagt aagacagtat 300 gatcaaatac ctatagaaat ttgtggaaaa agggctatag ggacagtatt agtagggccc 360 acacctatca acataatagg gagaaatatg ttgactcaga ttggttgtac tttaaatttt 420 ccaattagtc caattgaaac tgtaccagta aaattaaagc caggaatgga tggcccaaag 480 gtcaaacaat ggccattaac agaagagaaa ataaaagcat taacagaaat ttgtaaagaa 540 atggaggaag aagggaaaat ttcaaaaatt gggcctgaaa atccatataa cactccaata 600 tttgctataa agaaaaaaga cagtactaaa tggcgaaaat tagtagattt cagagaactc 660 aataaaagaa ctcaagactt ctgggaggtc caattaggaa tacctcaccc cgcggggtta 720 aaggagaaaa aatcagtaac agtactagat gtgggggatg catatttttc agttccccta 780 gataaagaat ttagaaaata tactgcattc actataccta gtaaaaataa tgagacacca 840 gggattagat atcagtacaa tgtacttcca cagggatgga aaggatcacc agcaatattt 900 caggctagca tgacaaaaat cttagagccc ttcagaaaga acaatccaga aatagagatc 960 taccaatata tggatgatct atatgtagga tctgacttag aaatagggca gcatagagca 1020 aaagtagaag aattaagaaa acatctgttg gaatgggggt ttaccacacc ggataaaaaa 1080 catcagaaag aacctccatt cctttggatg gggtatgagc tccatcctga caaatggaca 1140 gtacaaccta tacagctgcc agacaaagaa agctggactg tcaatgatat acaaaagtta 1200 gtgggaaaac taaattgggc aagtcagatt tatgcaggaa ttaaagtaaa acaactctgt 1260 aaactcatca ggggagctaa ggcattaaca gacatagtac cactgactgc agaagc 1316 // ID MK133222; SV 1; linear; genomic DNA; STD; VRL; 1295 BP. XX AC MK133222; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 4-D3 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1295 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1295 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; f5481d02e8e389ffa33914e0c6e6b518. XX FH Key Location/Qualifiers FH FT source 1..1295 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="4-D3" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1295 FT /gene="pol" FT CDS <1..>1295 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58060.1" FT /translation="SSEQARANSPTRRGDSPCSEGGVEGKGGAISLLFPQITLWQRPLV FT EVKVGGQLIEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYDQILMEISGKK FT AIGTVLVGPTPINIIGRNMLTQIGCTLNFPISTIDTIPVQLKPGMDGPKVKQWPLTEEK FT IKALTDICTEMENEGKISRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWE FT VQLGIPHPAGLKQKKSVTVLDVGDAYFSVPLHKDFRKYTAFTIPSTNNETPGIRYQYNV FT LPQGWKGSPAIFQSSMTKILEPFRKENPEIVIYQYMDDLYVGSDLEIGKHREKIEELRN FT HLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKEDWTVNDIQKLVGKLNW FT ASQIYPGIKVKQLCKLIRGTKALTDIVPLTAEA" XX SQ Sequence 1295 BP; 510 A; 223 C; 266 G; 296 T; 0 other; tcttcagaac aggccagagc caacagcccc acccgcagag gagatagccc ctgctctgaa 60 ggtggagtcg aaggaaaagg aggagctata tcccttctct tccctcaaat cactctttgg 120 caacgacccc tagtcgaagt aaaagtaggg ggacaactaa tagaagccct attagacaca 180 ggagcagatg atacagtatt agaagatata aatttaccag ggaaatggaa accaaaaatg 240 atagggggaa ttggaggttt tatcaaagta agacaatatg atcaaatact catggaaatt 300 agtgggaaaa aagctatagg gacagtatta gtaggaccta cacctatcaa cataattgga 360 agaaatatgt tgactcagat tggttgtact ttaaattttc caattagtac tattgacact 420 ataccagtac aattaaagcc aggaatggat ggcccaaagg ttaaacaatg gccattgaca 480 gaagagaaaa taaaagcatt aacagatatt tgtacagaaa tggaaaacga aggaaagatt 540 tcaagaattg ggcctgaaaa tccatataac actccaatat ttgctataaa aaagaaagac 600 agtactaaat ggagaaaatt agtagatttc agagaactca ataaaagaac tcaagacttt 660 tgggaggtcc aattaggaat acctcacccc gcagggttaa aacagaaaaa atcagtaaca 720 gtactagatg tgggggatgc atatttttca gttcccttac ataaagactt tagaaagtat 780 actgcattca ctatacctag tacaaataat gaaacaccag ggattagata tcagtacaat 840 gtgcttccac agggatggaa gggatcacca gcaatatttc agagtagcat gacaaaaatc 900 ttagagccct ttagaaaaga aaatccagaa atagtaattt accaatacat ggatgattta 960 tatgtaggat ctgacttaga aatagggaaa catagggaaa aaatagaaga gttaagaaat 1020 catttactga aatggggatt taccacccca gataagaaac atcagaaaga acccccattc 1080 ctttggatgg gatatgagct ccatcctgac aaatggacag tacaacctat acagttgcca 1140 gataaagaag actggactgt caatgatata caaaagttag tgggaaaact aaattgggca 1200 agtcagattt atccagggat taaagtaaaa caactatgta aactcattag ggggaccaaa 1260 gcactaacag acatagtacc actgactgca gaagc 1295 // ID MK133223; SV 1; linear; genomic DNA; STD; VRL; 1319 BP. XX AC MK133223; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 4-E7 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1319 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1319 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 123dc14a9c2d52e0ebea29265555a7b9. XX FH Key Location/Qualifiers FH FT source 1..1319 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="4-E7" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1319 FT /gene="pol" FT CDS <1..>1319 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58061.1" FT /translation="SSKQTRANSPTSGELGVRRGNSPLPEAGAPEAGAEGAVSLSLPQI FT TLWQRPLVTVRIGGQLIEALLDTGADDTVLKEIDLPGKWKPKMIGGIGGFIKVRQYDNL FT LMEIEGKRAIGTVLIGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGTDGPKVK FT QWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELN FT KRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETP FT GIRYQYNVLPQGWKGSPSIFQSSMIKILEPFRAENPEIIIYQYMDDLYVGSDLEIGQHR FT EKIEELRKHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKESWTVNDIQ FT KLVGKLNWASQIYAGIKVKQLCKLLRGAKALTDIVPLTEEA" XX SQ Sequence 1319 BP; 514 A; 238 C; 284 G; 283 T; 0 other; tcttcaaaac agaccagagc caacagcccc accagcggag agcttggggt tcggagagga 60 aatagccccc tccccgaagc aggagccccc gaagcaggag ccgaaggagc tgtatccctt 120 agcctccctc aaatcactct ttggcagcga cccctagtca cagtaagaat agggggacag 180 ctaatagaag ctttactaga tacaggagca gatgatacag tactaaaaga aatagatttg 240 ccaggaaaat ggaaaccaaa aatgataggg ggaattgggg gttttatcaa agtaagacag 300 tatgataacc tgctcatgga aattgaagga aaaagggcta taggtacagt attaatagga 360 cctacacctg tcaacataat tggaagaaat atgttgactc agattggatg tactttaaat 420 tttccaatta gtcccattga aactgtacca gtaaaattaa agccaggaac ggatggccca 480 aaagttaaac aatggccatt gacagaagaa aaaataaaag cattaacaga aatttgcaca 540 gaaatggaaa aggaaggaaa gatttcaaaa attgggcctg aaaacccata taacactcca 600 gtgtttgcta taaagaaaaa agacagtact aaatggagaa aactagttga ttttagagaa 660 ctcaataaaa gaactcaaga cttctgggaa gttcagttag gaataccaca cccagcaggg 720 ttaaaaaaga aaaaatcagt aacagtacta gatgtggggg acgcatattt ttcagttcct 780 ctagataaag attttagaaa gtatactgca ttcactatac ctagcataaa caatgagaca 840 ccagggatta gatatcagta caatgtgcta ccacagggat ggaaaggatc accatcaata 900 ttccagagta gcatgataaa aatcttagaa ccatttagag cagaaaatcc agaaataatc 960 atctatcaat acatggatga cttatatgta ggatctgact tagaaatagg acagcataga 1020 gaaaaaatag aggaattaag gaagcatctg ttgaagtggg ggtttactac accagataaa 1080 aaacatcaga aagaaccgcc atttctctgg atgggatatg agctccatcc tgacaagtgg 1140 acagtacaac ctatacagct gccagacaag gaaagctgga ctgtcaatga catacaaaag 1200 ttagtaggaa aactaaattg ggcaagtcaa atctatgcag gaattaaagt aaagcaacta 1260 tgtaaactcc ttaggggggc caaagcacta acagacatag taccattgac tgaagaagc 1319 // ID MK133224; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133224; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 4-D8 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 40df3506358ae415fd6dbfb5995558f6. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="4-D8" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58062.1" FT /translation="SSEQTGAISSTSRGLWDEGRSTLPPEAGAEGWGTKPSFSFPQITL FT WQRPVVTVKIEGQLKEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYDQIHI FT EICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVQLKPGMDGPKVKQW FT PLTEEKIKALTEICTEMEKEGKISRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDENFRKYTAFTIPSINNEAPGI FT RYQYNVLPQGWKGSPAIFQCSMTKILEPYRTKNPEMVIYQYMDDLYVGSDLEIGQHRAK FT IEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKESWTVNDIQKL FT VGKLNWASQIYPGIKVKQLCKLLRGTKALTDIVPLTAEA" XX SQ Sequence 1313 BP; 502 A; 225 C; 287 G; 299 T; 0 other; tcctcagagc agaccggagc catcagctcc accagcagag gactttggga tgagggaagg 60 agtacccttc cccccgaagc aggagctgaa ggatggggaa caaaaccctc cttcagtttc 120 cctcaaatca ctctttggca acgacctgtt gtcacagtaa aaatagaagg gcaactaaaa 180 gaagctctat tagacacagg agcagatgat acagtattag aagaaataaa tttgccagga 240 aaatggaagc caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 300 cagatacata tagaaatttg tggaaaaaag gctataggta cagtattggt aggacctaca 360 cctgtcaaca taattggacg aaatatgttg actcagattg gttgtacctt aaattttcca 420 ataagtccta ttgaaactgt accagtacaa ttaaagccag ggatggatgg cccaaaggtt 480 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagaaatttg tacagaaatg 540 gaaaaggaag gaaaaatttc aagaattggg cctgaaaatc catacaatac tcccatattt 600 gccataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agagcttaat 660 aaaagaactc aagatttttg ggaggttcaa ttaggaatac cacatcctgc tgggttgaaa 720 aagaaaaaat cagtaacagt attggatgtg ggggatgcat atttttcagt tcctctagat 780 gaaaatttca ggaagtatac tgcattcact atacctagta ttaataatga ggcaccaggg 840 attaggtatc agtacaatgt gctaccacag ggatggaaag gatcaccagc aatattccag 900 tgtagcatga caaaaatctt agaaccttat agaacaaaaa atccagaaat ggttatatac 960 cagtacatgg atgatttgta tgtagggtct gacttagaaa taggacaaca tagagcaaaa 1020 atagaggaac tgagagagca tctgttgaaa tggggattta ccacaccaga caaaaagcat 1080 cagaaagaac ccccattcct ttggatgggg tatgaactcc atcctgacaa atggacagtg 1140 cagcctatac aactgccaga caaagaaagc tggactgtca atgacataca gaaattagtg 1200 ggaaaactaa attgggcaag tcagatttat ccagggatta aagtgaagca attatgtaaa 1260 ctccttaggg gaacaaaagc actaacagac atagtaccac taactgcaga agc 1313 // ID MK133225; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133225; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 4-E8 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 81980971b1ba7b0400dd1a1d49573202. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="4-E8" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58063.1" FT /translation="PSERSRTNSPTGRELWDGGRDNPLPEAGSEREGAAPSSSFPQITL FT WQRPLVTIKIEGQLREALLDTGADDTVLEDINLTGKWKPRMIGGIGGFIKVRQYDQITI FT EICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQW FT PLTEEKIKALTEICNEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKEFRKYTAFTIPSVNNETPGV FT RYQYNVLPQGWKGSPAIFQSSMTKILAPFRSQNPEIVIYQYMDDLYVGSDLEIGQHRAK FT IEELRAHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQTIQLPEKDSWTVNDIQKL FT VGKLNWASQIYAGIKVKQLCKLLRGAKALTDIVPLTKEA" XX SQ Sequence 1313 BP; 502 A; 233 C; 293 G; 285 T; 0 other; ccctcagaac ggagtagaac caacagcccc accggcagag aactttggga tgggggaagg 60 gataaccccc tccccgaagc aggaagcgaa agagagggag ctgcaccctc ctctagtttc 120 cctcaaatca ctctttggca acgacccctt gtcacaataa aaatagaagg acagctaaga 180 gaggctctat tagatacagg ggcagatgat acagtattag aagatataaa tttgacagga 240 aaatggaaac caagaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 300 caaataacca tagaaatttg tggaaagaag gctataggta cagtattagt aggacctaca 360 cctgtcaaca taattggaag aaatatgttg actcagattg gctgtacttt aaattttcca 420 attagtccca ttgaaactgt accagtaaaa ctaaagccag gaatggatgg tccaaaggtt 480 aaacaatggc cattaacaga agaaaaaata aaagcattaa cagaaatatg taatgaaatg 540 gagaaggaag gaaaaatttc aaaaattggg ccagaaaatc catataacac tccaatattt 600 gctataaaga aaaaagacag tactaaatgg agaaaattgg tagattttag agagctcaat 660 aaaagaactc aagatttctg ggaagttcaa ctgggaatac cacatccagc aggtttaaaa 720 aagaaaaaat cagtaacagt gctggatgta ggggatgcat acttttcagt gcctttagac 780 aaagagttta gaaaatatac tgcattcacc atacctagtg taaacaatga gacaccaggg 840 gtgaggtatc agtacaatgt acttccacaa ggatggaaag gatcaccagc aatatttcaa 900 agtagcatga caaaaatctt agcacccttc aggtcacaga atccagaaat agtgatctac 960 cagtacatgg atgacttgta tgtgggatct gacttagaaa tagggcagca tagagcaaaa 1020 atagaggagt tgagggctca tctgttgaag tggggattta ctacaccaga taaaaagcac 1080 caaaaggaac ccccatttct ttggatggga tatgaactcc atcctgacaa atggacagtc 1140 cagactatac aactgccaga aaaagacagc tggactgtca atgatataca gaaattagtg 1200 ggaaaactaa attgggcaag ccagatttat gcagggataa aggtaaagca actgtgtaaa 1260 ctcctcaggg gggccaaagc gctaacagac atagtcccac taactaagga agc 1313 // ID MK133226; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133226; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 4-C6 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 04be0d4770c49b6b6eafb3b7f959ef24. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="4-C6" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58064.1" FT /translation="PSEQTRANSPTSRNPWDGGRDNPLSEAGTERQGTISFSNFPQITL FT WQRPLVSVKVGGQVIEALLDTGADDTVLENINLPGKWRPKMIGGIGGFIKVRQYDQILM FT EICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIDTVPVTLKPGMDGPKVKQW FT PLTEEKIKALTEICAEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKSFRKYTAFTIPNINNETPGI FT RYQYNVLPQGWKGSPAIFQCSMTKILEPFRVKNPDIVIYQYMDDLYVGSDLEIGQHRAK FT IEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTVNDIQKL FT VGKLNWASQIYAGIKVKQLSRLLRGAKALTDIVILTKEA" XX SQ Sequence 1313 BP; 505 A; 231 C; 277 G; 300 T; 0 other; ccctcagagc agaccagagc caacagcccc accagcagaa atccttggga tgggggaaga 60 gataaccccc tctctgaagc cggaaccgag agacaaggaa ctatatcctt ctctaacttc 120 cctcaaatca ctctttggca acgaccctta gtctcagtaa aagtaggggg acaagtaata 180 gaagccttac tagacacagg ggcagatgat acagtattag aaaacataaa tttaccagga 240 aaatggagac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acaatatgat 300 cagatactta tggaaatttg tggaaaaaag gctataggta cagtgttagt aggacctaca 360 cctgtcaaca taattggaag gaatatgttg actcagattg gttgtacttt aaattttccg 420 attagtccta ttgacactgt accagtgaca ttaaagccag gaatggatgg cccaaaggtg 480 aaacaatggc cattaacaga agaaaaaata aaagcattaa cagaaatttg tgcagagatg 540 gaaaaagaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt 600 gctataaaga aaaaggacag cactaaatgg agaaaattag tagattttag agaactcaat 660 aaaagaactc aagacttctg ggaagtccaa ttaggaatac ctcatcctgc ggggttaaaa 720 aagaaaaaat cagtaactgt gctagatgtg ggagatgcat atttttcagt tcccttagat 780 aaaagcttta gaaaatatac tgcattcacc atacctaata taaacaatga gacaccaggg 840 atcaggtatc agtacaatgt gcttccacaa ggatggaaag gatcaccagc aatatttcag 900 tgcagcatga caaaaatctt agagcccttt agggtaaaaa atccagacat agtgatttac 960 caatacatgg atgatttata tgtagggtct gacttagaaa tagggcaaca tagagcaaaa 1020 atagaggaat taagagaaca tttactgaag tggggattta ccacaccaga caaaaaacat 1080 cagaaagaac ctccatttct ttggatggga tatgaactcc atcctgacaa atggacagtc 1140 cagcctatac agctgccaga taaagatagc tggactgtca atgatataca gaaactagtg 1200 ggaaaactaa attgggcaag tcagatttat gcaggaatta aagtaaagca actgagtaga 1260 ctcctcaggg gagccaaagc tctaacagat atagtaatac tgactaaaga agc 1313 // ID MK133227; SV 1; linear; genomic DNA; STD; VRL; 1310 BP. XX AC MK133227; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 4-G6 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 839e650e1daad848b39b9775b4a001e9. XX FH Key Location/Qualifiers FH FT source 1..1310 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="4-G6" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1310 FT /gene="pol" FT CDS <1..>1310 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58065.1" FT /translation="SPEQTRAISPASRELWVRGGDDPISETRVEGPGTVSFSCPQIPLW FT QRPLVTIKIGGQLKEALLDTGADDTVLEEIDLPGKWKPRMIGGIGGFIKVRQYNDILIE FT IEGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNFPISPIETVPVQLKPGMDGPKVKQWP FT LTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRT FT QDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLHEDFRKYSAFTIPSINNETPGVR FT YQYNELPQGWKGSPAIFQSSMTKILEPFRQKNPEIVIYQYMDDLYVGSDLEIEQHRAKI FT EELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLV FT GKLIWASQIYAGIKVKQLCKLLRGTKALTDVVPLTREA" XX SQ Sequence 1310 BP; 490 A; 236 C; 293 G; 291 T; 0 other; tctccagagc agaccagagc catcagcccc gccagcagag agctttgggt tcggggagga 60 gatgacccca tctccgaaac aagagtcgaa ggaccaggga ctgtatcctt cagctgccct 120 cagatccctc tttggcagcg acccctcgtc acaataaaaa taggggggca gctgaaggaa 180 gctctattag atacaggagc agatgataca gtactagaag aaatagattt gccaggaaaa 240 tggaaaccaa gaatgatagg gggaattgga ggctttatca aagtaagaca gtacaatgac 300 atactcatag aaattgaagg aaaaaaggct ataggtacag tattagtagg acctacacct 360 gtcaacataa ttggaaggaa catgttgacc cagcttggtt gtactttaaa ttttccaatc 420 agtcctattg aaactgtacc agtacaatta aagccaggaa tggatggccc aaaagttaaa 480 caatggccat tgacagaaga aaaaataaaa gcgttagtag aaatttgtac agaaatggaa 540 aaggaaggaa aaatttcaaa aatcgggcct gaaaatccat ataacactcc agtatttgcc 600 ataaagaaaa aagacagtac caaatggaga aaattagtag attttagaga acttaataaa 660 agaactcagg acttctggga agttcaatta ggaataccgc acccagcagg gttaaaaaag 720 aaaaaatcag taacagtact ggatgtgggg gatgcatatt tttcagttcc tttacatgaa 780 gattttagaa aatattctgc attcaccata cctagtataa acaatgagac cccaggagtc 840 aggtatcagt acaacgagct accacaggga tggaaaggat cgccagcaat attccagagt 900 agcatgacaa aaatcttaga gccctttaga caaaagaatc cagaaatagt tatctatcaa 960 tacatggatg acttgtatgt aggatctgat ttagaaatag agcagcatag agcaaaaata 1020 gaggagttga gagctcatct attgagctgg gggttcacta caccagacaa aaagcatcag 1080 aaagaacctc catttctatg gatgggatat gaactccatc ctgacaaatg gacagtccag 1140 cctatacagc taccagaaaa agatagctgg actgtcaatg atatacagaa attagtagga 1200 aaactaattt gggcaagtca gatttatgca gggattaaag taaaacaact gtgtaagtta 1260 cttaggggaa ccaaagctct gacagatgta gtgccattga ctagggaagc 1310 // ID MK133228; SV 1; linear; genomic DNA; STD; VRL; 1307 BP. XX AC MK133228; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 4-G2 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1307 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1307 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 7cedc30084c6e5044d5322979d5f8512. XX FH Key Location/Qualifiers FH FT source 1..1307 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="4-G2" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1307 FT /gene="pol" FT CDS <1..>1307 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58066.1" FT /translation="SSDQARTNSPASGELRDRRGGSPLPEAGIETGTIPFNLPQITLWQ FT RPVVTIKVEGQLREALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVKQYDQIVIDI FT CGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPVATVPVKLKPGMDGPKIKQWPL FT TEEKIKALTEICTDMEKEGKISRIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQ FT DFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEEFRKYTAFTIPSINNETPGIRY FT QYNVLPQGWKGSPAIFQSTMIKILEPFRTKHPEIVIYQYMDDLYVGSDLEIGQHRAKIE FT ELRAHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPVVLPDKDSWTVNDIQKLVG FT KLNWASQIYAGIKVKQLCRLLRGAKALTDIVTLTEEA" XX SQ Sequence 1307 BP; 497 A; 237 C; 283 G; 290 T; 0 other; tcctcagacc aggccagaac caacagcccc gccagcggag agcttcggga tcggagagga 60 ggcagccccc tccccgaagc aggaatcgaa acaggaacta taccctttaa cctccctcaa 120 atcactcttt ggcaacgacc agtagtcaca ataaaagtag agggacagtt aagggaagct 180 ctactagaca caggagcaga tgacacagta ctagaagata taaatttgcc aggaaaatgg 240 aagccaaaaa tgataggggg aattggaggt tttatcaaag taaaacagta tgatcagata 300 gttatagaca tttgtggaaa aaaggctata ggtacagtat tagtaggacc tacacctgtc 360 aacataattg gaagaaacat gttgactcag attggttgta ctttaaattt tccaattagt 420 cctgttgcaa ctgtaccagt aaaattaaag ccaggaatgg atggcccaaa aattaaacaa 480 tggccattga cagaagaaaa aataaaagca ttaacagaaa tttgtacaga tatggaaaag 540 gaaggaaaaa tctcaagaat tgggcctgaa aacccatata acactccagt gtttgccata 600 aagaaaaaag acagtactaa atggagaaaa ttagttgact ttagggagct caataaaaga 660 actcaagatt tctgggaagt tcaattagga ataccacatc ctgctgggtt gaaaaagaaa 720 aaatcagtaa cagtattaga tgtgggggat gcatacttct cagtcccttt agatgaagag 780 ttcaggaagt acactgcatt cactatacct agtattaata atgagacacc agggattaga 840 tatcagtaca atgtactacc acagggatgg aaaggatcac cagcaatatt tcaaagtact 900 atgataaaaa tcttagaacc atttagaaca aaacacccag aaatagttat ctatcaatac 960 atggatgact tatatgtggg atctgactta gaaataggac agcatagagc aaaaatagag 1020 gaattgagag ctcatttatt gaagtgggga ttcaccacac cagacaaaaa acatcagaaa 1080 gaacccccat tcctttggat gggatatgag ctccatcctg acaaatggac agtccagcct 1140 gtagtgctac cagataaaga cagctggact gtcaatgata tacagaaatt agtgggaaaa 1200 ctaaattggg caagtcagat ttatgcaggg attaaagtaa agcaactgtg cagactcctc 1260 agaggagcca aggcactaac agatatagta acactgactg aggaggc 1307 // ID MK133229; SV 1; linear; genomic DNA; STD; VRL; 1313 BP. XX AC MK133229; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 4-I5 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1313 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; f32cda058fc5f64b84992cd698afc4fe. XX FH Key Location/Qualifiers FH FT source 1..1313 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="4-I5" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1313 FT /gene="pol" FT CDS <1..>1313 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58067.1" FT /translation="SSEQAGANSSTSRGLGDGGRDNLLPEAGTEGQDTVSFSNFPQITL FT WQRPLVTVRIGGQPIEALLDTGADDTVLEGINLPGPWKPKMIGGIGGFIKVRQYDQILI FT EICNRKAVGTVLIGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQW FT PLTEEKIKALTDICTEMEKEGKISRIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKR FT TQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEGFRKYTAFTIPSINNETPGI FT RYQYNVLPQGWKGSPAIFQASMTKILEPFRAKNPEMVIYQYMDDLYVGSDLEIKQHRAK FT IEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKL FT IGKLNWASQIYAGIKVKQLCKLLRGAKSLTDVVTLTEEA" XX SQ Sequence 1313 BP; 503 A; 228 C; 279 G; 303 T; 0 other; tcctcagaac aggccggagc caacagctcc accagcagag gtcttgggga tgggggaaga 60 gataacctcc tccccgaagc aggaacagag ggacaagaca ctgtatcctt ctctaacttc 120 cctcaaatca ctctttggca acgaccctta gtcacagtaa gaataggggg acagccaata 180 gaagccctat tagacacagg agcagatgat acagtattag aaggaataaa tttaccagga 240 ccatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acaatatgat 300 cagatactta tagaaatttg taataggaag gctgtaggta cagtattaat aggacctaca 360 cctgtcaaca taattggacg aaatatgttg actcagattg gttgtacttt aaattttcca 420 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt 480 aaacaatggc cattgacaga agaaaaaata aaggcattaa cagatatttg tacagaaatg 540 gaaaaggaag gaaaaatttc aagaattggg cctgaaaatc catacaatac tccagtattt 600 gccataaaga aaaaggatag tactaaatgg aggaaattag tagatttcag agaactcaat 660 aaaagaactc aagatttttg ggaagtccaa ttaggaatac ctcatcccgc gggactaaaa 720 aagaaaaaat cagtaacagt actagatgtg ggggatgcat atttttcagt tcccttagat 780 gagggcttta gaaagtatac tgcattcact atacctagta taaataatga gacaccaggg 840 attagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatatttcag 900 gctagcatga caaaaatctt agagcccttt agagcaaaaa acccagaaat ggtaatctac 960 caatatatgg atgatttata tgtaggatct gatttagaga taaagcagca tagagcaaaa 1020 atagaggagt tgagagaaca tctattaaaa tggggattta ccacaccaga caaaaaacat 1080 cagaaagaac ctccatttct ctggatggga tatgaactcc atcctgacaa atggacagtt 1140 cagcctatac agctgccaga aaaagacagc tggactgtca atgatataca gaaattaatt 1200 ggaaaactaa attgggcaag tcagatttat gcaggaatca aagtaaagca actgtgtaaa 1260 ctcctcagag gagccaaatc actaacagat gtagtaacat tgactgagga ggc 1313 // ID MK133230; SV 1; linear; genomic DNA; STD; VRL; 1307 BP. XX AC MK133230; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 4-C1 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1307 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1307 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 6f6c6299ef9849a8b4ec1daee45b6dbd. XX FH Key Location/Qualifiers FH FT source 1..1307 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="4-C1" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1307 FT /gene="pol" FT CDS <1..>1307 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58068.1" FT /translation="SPEQTRADSPTSRDLWDGGRDLLPEAGAEGQGTISFSFPQITLWQ FT RPVITVKIEGQLIEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYDQILIEI FT CGKRAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIQTVPVNLKPGMDGPRVKQWPL FT TEEKIKALTEICTEMEKEGKISRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQ FT DFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSINNETPGIRY FT QYNVLPQGWKGSPSIFQASMIKILEPFRTKNPELVIYQYMDDLYVGSDLEIGQHRARIE FT ELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTVNDIQKLVG FT KLNWASQIYPGIKVKQLCKLLRGAKALTEIVPLTEEA" XX SQ Sequence 1307 BP; 505 A; 233 C; 276 G; 293 T; 0 other; tccccagagc agacccgagc cgacagcccc accagcagag atctttggga tgggggaaga 60 gacctcctcc ccgaagcagg agccgaagga caaggaacta tatcctttag cttccctcaa 120 atcactcttt ggcaacgacc agtaatcaca gtaaaaatag agggacagct aatagaagcc 180 ctattagaca caggggcaga tgatacagta ttagaagaaa taaatttacc aggaaaatgg 240 aaaccaaaaa tgataggggg aattggaggt tttatcaaag taagacaata tgatcagata 300 cttatagaaa tatgtggaaa aagggctata ggtacagtat tggtaggacc tacacctgtc 360 aacataattg gacgaaatat gttgactcag atcggttgta ctttaaattt tccaattagt 420 cctattcaaa ctgtaccagt aaacttaaag ccaggaatgg atggcccaag ggttaaacaa 480 tggccattga cagaagaaaa aataaaagca ttaacagaaa tttgtacaga aatggaaaag 540 gaaggaaaaa tctcaagaat tgggcctgaa aatccataca atactccaat atttgccata 600 aagaaaaaag atagtactaa atggagaaaa ttagtagatt tcagagaact caataaaagg 660 actcaagatt tctgggaggt tcaattagga atacctcatc ctgcaggatt aaaaaagaaa 720 aaatcagtaa cagtactaga tgtgggggat gcatattttt cagttcccct agacgaaagt 780 tttagaaagt atactgcatt caccatacct agtataaata atgaaacacc aggaattaga 840 tatcagtaca atgtgcttcc gcaaggatgg aagggatcac catcaatatt tcaggctagc 900 atgataaaaa tcttagagcc ctttagaaca aaaaatccag aactggtgat ctaccaatat 960 atggatgatt tatatgtagg gtctgactta gaaatagggc agcatagagc aagaatagag 1020 gagttgagag aacatctact aaaatgggga tttaccacac cagacaaaaa acatcagaaa 1080 gaacctccat ttctttggat gggatatgaa ctccatcctg acaaatggac agtccagcct 1140 atacagctgc cagacaaaga cagctggact gtcaatgaca tacaaaaatt agtgggaaaa 1200 ctaaactggg caagtcagat ttatccagga attaaagtaa agcaattgtg taaactcctc 1260 agaggggcca aagcattaac agagatagta ccactgactg aggaagc 1307 // ID MK133231; SV 1; linear; genomic DNA; STD; VRL; 1307 BP. XX AC MK133231; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 4-A1 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1307 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1307 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 2bd7152f07a9e022ca765c68e9678def. XX FH Key Location/Qualifiers FH FT source 1..1307 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="4-A1" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1307 FT /gene="pol" FT CDS <1..>1307 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58069.1" FT /translation="SPEQTRANSPTSRELCTQGGDSPLPKTGAEGGTISLSLPQITLWQ FT RPLVTVKIGGQTIEALLDTGADDTVLEDINIPGKWKPKMIGGIGGFIKVRQYDHILIEI FT CGHRAIGTVLIGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPL FT TEEKIKALTEICNAMEEEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQ FT DFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKEFRKYTAFTIPSINNETPGIRY FT QYNVLPQGWKGSPAIFQYSMTKILEPFRKRNPEIVIYQYMDDLYVGSDLEIGQHRAKIE FT ELRGHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKESWTVNDIQKLVG FT KLNWASQIYAGIKVRQLCKLLRGAKALTEIVPLTAEA" XX SQ Sequence 1307 BP; 513 A; 235 C; 273 G; 286 T; 0 other; tctccagaac agaccagagc caacagcccc accagcagag agctgtgtac ccagggagga 60 gatagccccc tccccaaaac aggagccgaa ggaggaacta tatcccttag tctccctcaa 120 atcactcttt ggcagcgacc cctagtcaca gtaaagatag ggggacaaac aatagaagct 180 ctactagaca caggagcaga tgatacagta ttagaagaca taaatatacc aggaaaatgg 240 aaaccaaaaa tgataggggg aattggaggc tttatcaaag taagacagta tgatcatata 300 ctcatagaaa tctgtggaca tagagctata ggtacagtat taataggacc tacacctgtc 360 aacataattg gaagaaatat gttgactcag attggctgta cattaaattt tccaataagt 420 cctattgaaa ctgtaccagt aaaattaaag ccaggaatgg atggcccaaa ggttaaacaa 480 tggccattga cagaagagaa aataaaagca ttaacagaaa tttgtaatgc aatggaagag 540 gaaggaaaaa tttcaaaaat tgggcctgaa aatccataca atactccaat atttgccata 600 aagaaaaaag acagtactaa gtggagaaaa ttagtagatt tcagagaact taataagaga 660 actcaagact tctgggaagt tcaactagga ataccgcatc ccgcagggtt aaaaaagaaa 720 aaatcagtaa cagtactgga tgtgggtgat gcatattttt cagttccctt agataaagag 780 tttagaaagt atactgcatt caccataccc agtataaata atgagacacc agggattaga 840 tatcaataca atgtgcttcc acagggatgg aaaggatcac cagcaatatt tcagtatagc 900 atgacaaaaa tattagagcc ctttagaaaa agaaatccag aaatagtgat ctatcaatac 960 atggatgatt tatatgtagg atctgattta gaaatagggc agcatagagc aaaaatagag 1020 gagttaagag gacatcttct gaaatgggga ttcaccacac cagataaaaa acatcagaaa 1080 gaacctccat tcctttggat gggatatgag ctccatcctg acaaatggac agtacaacct 1140 atacagctgc cagacaagga aagctggact gtcaatgata tacaaaagtt agtaggaaaa 1200 ctaaattggg caagtcagat ctatgcagga attaaagtaa gacagctatg taaactcctt 1260 aggggggcca aagcactaac agaaatagta ccactgactg cagaagc 1307 // ID MK133232; SV 1; linear; genomic DNA; STD; VRL; 1307 BP. XX AC MK133232; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 4-E6 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1307 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1307 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 32b618da32642ec13608cfa314e4fbce. XX FH Key Location/Qualifiers FH FT source 1..1307 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="4-E6" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1307 FT /gene="pol" FT CDS <1..>1307 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58070.1" FT /translation="SSEQARTNSPASGELRDRRGGSPLPEAGIEAGTIPFNFPQITLWQ FT RPVVQVKVEGQLREALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVKQYDQIVIDI FT CGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPVETVPVKLKPGMDGPKIKQWPL FT TEEKIKALTEICTDMEKEGKISRIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQ FT DFWEVQLGIPHPAGLKKKRSVTVLDVGDAYFSVPLDEEFRKYTAFTIPSINNETPGIRY FT QYNVLPQGWKGSPAIFQSTMIKILEPFRTKHPEIVIYQYMDDLYVGSDLEIGQHRTKIE FT ELRAHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPVVLPDKDSWTVNDIQKLVG FT KLNWASQIYAGIKVKQLCRLLRGAKALTDVVTLTEEA" XX SQ Sequence 1307 BP; 487 A; 234 C; 294 G; 292 T; 0 other; tcctcagagc aggccagaac caacagcccc gccagcggag agcttcggga tcggagagga 60 ggcagccccc tccccgaagc aggaatcgaa gcaggaacta taccctttaa cttccctcaa 120 atcactcttt ggcaacgacc agtagtccaa gtaaaagtag agggacagtt aagggaagct 180 ctactagaca caggagcaga tgacacagtc ttagaagata taaatttgcc aggaaaatgg 240 aagccaaaaa tgataggggg aattggaggt tttatcaaag taaaacagta tgatcagata 300 gttatagaca tttgtggaaa aaaggctata ggtacagtat tagtaggacc tacacctgtc 360 aacataattg gaagaaatat gttgactcag attggttgta ctttaaattt tccaattagt 420 cctgttgaaa ctgtaccagt aaaattaaag ccaggaatgg atggcccaaa aattaaacaa 480 tggccattga cagaagaaaa gataaaagca ttaacagaaa tttgtacaga tatggaaaag 540 gaaggaaaaa tctcaagaat tgggcctgaa aacccatata acactccagt gtttgccata 600 aagaaaaaag acagtactaa atggagaaaa ttagttgact ttagggagct caataaaaga 660 actcaagatt tctgggaagt tcaattagga ataccacatc ctgctgggtt gaagaagaaa 720 agatcagtaa cagtattaga tgtgggggat gcatacttct cagtcccttt agatgaggag 780 ttcaggaagt acactgcatt cactatacct agtattaata atgagacacc agggattaga 840 tatcagtaca atgtgctacc acagggatgg aagggatcac cagcaatatt tcaaagtact 900 atgataaaaa tcttagaacc atttagaaca aaacacccag aaatagttat ctatcaatac 960 atggatgact tatatgtggg atctgactta gaaataggac agcatagaac aaaaatagag 1020 gagttgagag cccatttatt gaagtgggga ttcaccacac cagacaaaaa acatcagaaa 1080 gaacccccat tcctttggat gggatatgag cttcatcctg acaaatggac agtccagccc 1140 gtagtgctac cagataaaga cagctggact gtcaatgata tacagaaatt agtgggaaaa 1200 ctaaattggg caagtcagat ttatgcaggg attaaagtaa agcaactgtg cagactcctc 1260 aggggagcca aggcactaac agatgtagta acactgactg aggaggc 1307 // ID MK133233; SV 1; linear; genomic DNA; STD; VRL; 1310 BP. XX AC MK133233; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 4-B7 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; 8ea06791678a03b36896eda9ceee1992. XX FH Key Location/Qualifiers FH FT source 1..1310 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="4-B7" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1310 FT /gene="pol" FT CDS <1..>1310 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58071.1" FT /translation="PSEQTRTNSPTNGELWVWGGDNPLSETGAERQGTVSFSFPQITLW FT QRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPIE FT ICGQKAVGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPRVKQWP FT LTEEKIKALTEICTDMEKEGKISRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRT FT QDFWEIQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSVNNGTPGIR FT YQYNVLPQGWKGSPAIFQFSMIKILEPFRKQNPDIVIYQYMDDLYVGSDLEIEQHRTKI FT EELRDHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIKLPEKESWTVNDIQKLV FT GKLNWASQIYGGIKVRQLCKLLRGAKALTEVVPLTREA" XX SQ Sequence 1310 BP; 505 A; 216 C; 281 G; 308 T; 0 other; ccttcagagc agaccagaac caacagcccc accaatggag agctttgggt ttggggagga 60 gataaccccc tctcagaaac aggagcagaa agacaaggaa ctgtatcctt tagcttccct 120 caaatcactc tttggcaacg accccttgtc acaataaaga tagggggaca actaaaggaa 180 gctctattag atacaggagc agatgataca gtattagaag aaatgaattt gccaggaaaa 240 tggaagccaa aaatgatagg gggaattgga ggttttatca aagtaagaca atatgatcaa 300 atacccatag aaatctgtgg acagaaagca gtaggtacag tattagtagg acctacacct 360 gttaacataa ttggaagaaa tttgttgact cagattggct gcactttaaa ctttccaatt 420 agtcctattg aaactgtacc tgtaaaatta aagccaggaa tggatgggcc aagagttaaa 480 caatggccat tgacagaaga aaaaataaaa gcattaacag agatttgtac agatatggaa 540 aaggaaggaa aaatttcgag aattgggcct gaaaatccat acaatactcc aatttttgcc 600 ataaagaaaa aagacagtac taagtggaga aaactagtag attttagaga acttaataaa 660 agaactcaag acttctggga aattcaatta ggaataccgc atcctgcagg gctaaaaaag 720 aagaaatcag tgacagtact ggatgtgggt gatgcatatt tttcagttcc cttagatgaa 780 gactttagga agtatactgc atttaccata cctagtgtaa ataatgggac accagggatt 840 agatatcagt acaatgtgct tccacaggga tggaaaggat cgccagcaat attccaattt 900 agtatgataa aaatcttaga gccctttaga aaacaaaatc cagatatagt tatttatcaa 960 tatatggatg atttgtatgt aggatctgac ttagaaatag agcagcatag gacaaaaata 1020 gaggaattaa gagaccatct actgaagtgg ggatttacca ccccagacaa aaaacatcag 1080 aaagaacctc catttctttg gatggggtat gagcttcatc ctgataaatg gacagtacag 1140 cctataaaac tgccagaaaa agaaagctgg actgtcaatg atatacagaa gttagtagga 1200 aaattaaatt gggcaagcca gatttatgga ggaattaaag taagacaatt atgtaaactc 1260 cttagaggag ccaaagcact gacagaagta gtaccactaa caagagaagc 1310 // ID MK133234; SV 1; linear; genomic DNA; STD; VRL; 1310 BP. XX AC MK133234; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE HIV-1 isolate 4-G3 from Democratic Republic of the Congo pol protein (pol) DE gene, partial cds. XX KW . XX OS Human immunodeficiency virus 1 OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. XX RN [1] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT "HIV-1 Subtypes and Drug Resistance Mutations among Female Sex Workers RT Varied in Different Cities and Regions of the Democratic Republic of RT Congo"; RL Unpublished. XX RN [2] RP 1-1310 RA Kwon E.H., Musema G.M.A., Boelter J., Tshala D.K., Kayembe P.K., West J., RA Wood C.; RT ; RL Submitted (06-NOV-2018) to the INSDC. RL Nebraska Center for Virology, University of Nebraska-Lincoln, 4240 Fair St, RL Lincoln, NE 68583, USA XX DR MD5; b05caadf999cf6825a35ee2632c72b6b. XX FH Key Location/Qualifiers FH FT source 1..1310 FT /organism="Human immunodeficiency virus 1" FT /host="Homo sapiens" FT /isolate="4-G3" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo" FT /collection_date="2012" FT /proviral FT /db_xref="taxon:11676" FT gene <1..>1310 FT /gene="pol" FT CDS <1..>1310 FT /codon_start=1 FT /gene="pol" FT /product="pol protein" FT /protein_id="QDZ58072.1" FT /translation="SSEQARANSPTRRELRVRRGDNPLPEAGAEGKGSTSLSFPQITLW FT QRPLVTVRIGGQLIEALLDTGADDTVLEHIELPGKWKPKMIGGIGGFIKVRQYDQILIE FT IEGRKAIGTVLVGPTPINIIGRNMLTQIGCTLNFPISPIETIPVKLKPGMDGPKVKQWP FT LTEEKIKALTEICMEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRT FT QDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSVNNETPGIR FT YQYNVLPQGWKGSPAIFQSSMTKILEPFRTRNPEMVIYQYMDDLYVGSDLEIGQHRAKI FT EELRDHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPNKESWTVNDIQKLV FT GKLNWASQIYPGVKIRQLCKLLRGTKALTDIVTLTAEA" XX SQ Sequence 1310 BP; 502 A; 241 C; 287 G; 280 T; 0 other; tcttcagaac aggccagagc caacagcccc acccgcagag agcttcgggt tcggagagga 60 gataaccccc tcccagaagc aggagccgag ggaaaaggaa gcacctccct tagcttccct 120 caaatcactc tttggcagcg acccctagtc acagtaagaa tagggggaca gctaatagaa 180 gccctattgg acacaggagc agatgataca gtattagaac acatagaatt accaggaaaa 240 tggaaaccaa aaatgatagg gggaattgga ggatttatca aagtaagaca gtatgatcaa 300 atacttatag aaattgaagg aagaaaagct atagggacag tattagtagg acctacacct 360 atcaacataa ttggaaggaa tatgttgact cagattggtt gtactctaaa ttttccaatt 420 agtcctattg aaactatacc agtaaaatta aagccaggaa tggatggccc aaaggttaaa 480 caatggccat tgacagaaga gaaaataaaa gcattaacag aaatttgtat ggaaatggaa 540 aaggaaggga aaatttcaaa aattggacct gaaaatcctt acaacactcc agtatttgca 600 ataaagaaaa aagacagtac caaatggaga aaattggtag atttcagaga actcaataaa 660 agaacccaag acttctggga ggtccaatta ggtatacctc accccgcggg gttaaaaaag 720 aaaaaatcag taacagtact agatgtgggg gatgcatatt tttcagtgcc cctagataaa 780 gactttagga agtatactgc attcactata cctagtgtaa ataatgagac accagggatt 840 agatatcagt acaatgtgct tccacaggga tggaaaggat caccagcaat atttcaaagt 900 agcatgacaa aaatcttaga gccctttaga acaagaaatc cagaaatggt gatctaccaa 960 tacatggatg atttatacgt aggatctgac ttagagatag ggcagcatag agcaaaaata 1020 gaggagttaa gagatcatct cctgagatgg ggatttacca caccagataa aaaacatcag 1080 aaagaacctc cattcctttg gatgggatat gagctccatc ctgacaaatg gacggtacag 1140 cctatacagc tgccaaacaa ggaaagctgg actgtcaatg atatacaaaa gctagtggga 1200 aaactaaatt gggcaagtca aatctatcca ggggttaaaa taaggcaact atgtaaactc 1260 cttaggggga ctaaagcact aacagacata gtaacactga ctgcagaagc 1310 // ID MK273077; SV 1; linear; viral cRNA; STD; VRL; 6690 BP. XX AC MK273077; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Citrus virus A isolate P1492 segment RNA1 RNA-dependent RNA polymerase DE (RdRp) gene, complete cds. XX KW . XX OS Citrus virus A OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; unclassified Bunyavirales. XX RN [1] RP 1-6690 RA Laurence S.D., Flora D., Armelle M., Marie L., Chantal F., Thierry C.; RT "First Report of Citrus Virus A (CiVA) Infecting Pear (Pyrus communis) in RT France"; RL Unpublished. XX RN [2] RP 1-6690 RA Laurence S.D., Flora D., Armelle M., Marie L., Chantal F., Thierry C.; RT ; RL Submitted (10-DEC-2018) to the INSDC. RL Virologie, INRA - UMR 1332 Biologie du Fruit et Pathologie, 71 Avenue RL Edouard Bourleaux cs 20032, Villenave d'ornon 33882, France XX DR MD5; e70c596f662bd67474e41fb8f1f292e8. XX CC ##Assembly-Data-START## CC Assembly Method :: CLC v. 11 CC Sequencing Technology :: Illumina; Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..6690 FT /organism="Citrus virus A" FT /segment="RNA1" FT /host="Pyrus communis cv. Packham's Triumph" FT /isolate="P1492" FT /mol_type="viral cRNA" FT /country="France" FT /collection_date="2017" FT /db_xref="taxon:2484986" FT gene complement(86..6640) FT /gene="RdRp" FT CDS complement(86..6640) FT /codon_start=1 FT /gene="RdRp" FT /product="RNA-dependent RNA polymerase" FT /protein_id="QEE94611.1" FT /translation="MTTKLRVDSNFSVGSLKLSKIEPTLYVCSELPEPNYSCSYNGKTF FT TIKVNGRERELDVSSENLRKIRHEVVSSVMLFETDEPLSKIGIKGEESDLTPDYINLNF FT KSVLEVGTTAISELFALKKMYTGKMVKYSYLIDPTGYTLFLLIVSPSRVYCNFELTQDI FT VNCLCYRARVGLALESVISEYIGQDVFSEDLTADEAIVKDVFRGLMFNTESKYDFDIGV FT INSMSDPVTKEDQRVVGKALKASLMESTQGSECNSEDLKKYLDKFEDTSKISNKRVTNI FT PQIYQFRKPQADTETDEETCRDMPLYLKKIWGASSSAKPQSLSYQQQLDEAMGVKTYER FT HRVQKGAAFSVKSLTESDKIEAAKSGLWAKALSQHPELVTKSAEDKKSFHPILTDTEDI FT SKFVNTRLLAECDHTIVPKEIFQLMKKGKQVWGGEKSLSLNIFNKLQYTIACNFGQTVS FT NIMTEICYSHKYWIKRSDFYHKIHQGIHILIRCTGDHIFAIFAFPKSSCKSIETGKIGP FT TIWESNQYFFTDVCSFNEPSIEHFVKSGPYICSIISHLISHLEFDLSNIDLSSKVLNQH FT LASILLLFLNNKTDCEELITNQRYLTMGILEELDPNPYRFCERLPEVLRSRLTSYFLKK FT SISHMQYYAETKVLKIPNKETLEYDIVYSGLKSLFGDYEPSLKQKVNEFYFGYVVSKER FT GRGSDRNFKIMKKIVAEEYRFRDTVTSTFSRSLEPKIHVSNPVMIKVFVHIFKSILIEI FT LGKDYALIIKKEIIKSMAQCSFEDLATLKVSSRSYDDSLIIPNIKEDMANKVMRDLYEK FT SNPKEKTKRPRVMESISLLVEEFEKVECKKIRHPVELIPYCLKEIDKRGFWDSDIFPKS FT QHGGDREIHVLEIKMRVLQFFCESMSKSLCRLVPSDTLTHPYGKESFVKKHYQDSADKL FT GKQFFTMGKSADATKWCQRNDSSKFAAVISPFLPIEFRFFFIHVMSLWKVKRISFPVQF FT AANFQANKNVKSNKIYMRMKEEFFLGEGIFQQAQSNKMFIRSGMMQGILHYTSSFTHTL FT IQEVMKKLQIDYLKRRGIHCNITVVQGSDDSAQLISLTGLPSHNKTRLATTLLHWKENV FT SKYFSIYTSRAKSSIGCLDLIEYNSEWMVRNNVVKPTFRWVSACLETTVTERFIDRIRI FT NYNVASQVLEGGGKVLEVALVQLCQAWMHYLLLGLHTSKLATKACSFMIDQLDPSLGFY FT PLDSDFCAGITGVEFQIYRLFVQTNYGCGLSYANIHESNTKYEEEEIPDQSVSKALRSA FT KVTFSNMKLWQEQVRRMGIPDLEELILEVEKNPYLIYARHKAWSEAKFAVFLKMFQPGV FT KESIGRQAPTARLMSASAYMISRPCVTIHINGDMCKVSLLRALAYNKIDKEGKTKLEPN FT LAFTHAEEYKEVMEYIVDLETKSTMVPSRLRTRNKQKISVFERSLDDVPIVDLCRKKWF FT GIGRLPLSRRQFDSFWNEAKLKYPFLKDNRNETKEMLNYNEVELKGFLESITSKPRHIV FT LLDTSAKSASLFNSISRIFWNGVKLVLPGRSEEEETSYSIRSKIFTVMSSWYSEIIKKK FT KIQEIITESSALNKIRVPHRIKKLRVLRKWFADQDKASIVRYISEEKLGTVGFFTSRQK FT GWGKTRSGRGEWRGKCLDVSVVVSMRDNYCSKITVSKLIDLRTLGPLLLELMNSFSLDT FT PNIENDKYDHWLTGSGRITGGYGKAAYYPIEIDTSLKIDIIDQISDYTWSWSVSNNRIR FT LQAEYGENQRMTILSEGFTSKDWDPDFTIDDDILLKHWSSGTPIPIETIEEEIVSICKP FT LPGQILKAFRNRREALTKSGWVLGDFLDTVKKQLLSTEDILEHEEPIFEDYDIDLDVEA FT LLDEMNMDMSDTLDWTLDDRFDDIEDLNLEEDLFSTNIDMFEQIENQLALFTVNPLIEE FT YTQNDKTSMPKSNLALSNIDTLSRVLMGDEGILQTVKRFKLNNNLTAPGFMGMLLSFFC FT GRVCMPAPDEVYEAISELDKDSAKISSMASDATEIAKLDPVDLDSRIDYLEKQMDGAPA FT DLFNMLNNIKIRYENVRTISKLSTTKNSDMDSIKVIDVAEKLKPLLLENNYIPESYKLL FT NKGVFIQILRAELDQHVDDLTREGRLTFAQQSVYREAIGKPYLTTLTLDMLSSRYGLAI FT TCCGYKTEGIHRVEI" XX SQ Sequence 6690 BP; 1926 A; 1331 C; 1057 G; 2376 T; 0 other; acacaaagac tcccaaactt ttattaagtt ttttatcaag aatcaaataa cttatttatg 60 ttaaggcctt tgtgcgggta gtagattaaa tctcaactct gtgaattcct tcagtcttgt 120 aaccacaaca agttattgct aggccatatc tagaactaag catatccaat gtaagtgttg 180 ttagataagg cttaccaatc gcttctctat aaacagattg ttgtgcaaat gttaatctgc 240 cttctctggt taaatcatca acatgttgat ccaactcggc tcttaatatt tgaatgaaaa 300 cccctttatt caaaagttta taactctctg ggatataatt gttttctaac aataaaggtt 360 ttaatttttc tgctacatct attactttta ttgagtccat gtcactgttc tttgtagtac 420 ttaattttga aatagttctt acattctcat acctaatttt aatattgttc aacatgttaa 480 agagatcagc tggggcacca tccatttgtt tttctaaata atcaattctc gagtctaagt 540 caaccggatc taattttgca atctctgttg catcagaagc catggatgaa attttggcac 600 tatccttatc taactcacta atagcttcat aaacttcatc cggagcaggc atgcaaactc 660 taccacagaa gaatgacaat agcataccca tgaaccctgg tgctgttaga ttgttattta 720 gcttaaatct tttaactgtt tgtaatattc cttcatcccc cataagtact ctgctgagag 780 tatctatatt ggatagagct aaattggatt ttggcatgct agttttatca ttttgtgtat 840 actcttcaat caaagggtta acagtaaata atgctagctg attttcaatt tgctcaaaca 900 tatcaatgtt agtgctaaac aaatcctctt caaggtttag atcctcaatg tcatcaaatc 960 tatcatctag tgtccaatcc agtgtgtctg acatatccat attcatttca tctaacaaag 1020 cctcaacatc taaatcaata tcataatctt caaaaattgg ctcttcgtgc tctaaaatat 1080 cttcagtaga taagagttgt ttctttacag tatctaaaaa gtctcctaac acccacccag 1140 actttgtcaa tgcttctctt ctatttctaa aagcttttaa gatttgtcca ggtagaggct 1200 tgcagatgga gactatttct tcttctattg tttcaatagg tataggtgtt cctgaagacc 1260 aatgttttaa taagatatca tcatcaatag tgaaatcagg atcccagtct ttgctagtga 1320 agccctcact caaaattgtc atgcgctgat tttcgccata ctcagcttgc aatctgattc 1380 tattatttga gacagaccag ctccaggtgt aatctgatat ttggtctatg atgtctatct 1440 tcagcgatgt gtcaatttca attgggtagt aagctgcctt accatatcct ccagttatcc 1500 tgccacttcc ggttagccag tggtcatact tgtcattttc aatattaggg gtgtctaagg 1560 aaaaactgtt cattaattct aagagtagtg gaccaagagt cctaaggtca attaacttgc 1620 ttacagtgat tttagaacaa taattatccc tcatgctaac aacaacagac acatctaaac 1680 atttccctct ccattctcct cttccagatc ttgttttgcc ccaacccttt tgcctactag 1740 taaaaaaacc aactgttccc aatttctctt ctgaaatgta tctaactatt gatgctttgt 1800 cttgatcagc aaaccatttc ctcagaaccc taagtttttt tattctatga ggaactcgta 1860 tcttatttaa tgcagaactc tcagttatta tctcttgtat ttttttcttt ttaattattt 1920 cagagtacca actagacata acagtgaata tctttgatct tatggagtaa gaagtctcct 1980 cttcttctga cctacctggc aacactagtt ttaccccatt ccagaaaatt cttgatatgg 2040 agttgaataa agatgcagat tttgcactgg tatctaaaag tacaatgtgc cgtggtttag 2100 atgttataga ctctaaaaat ccctttagct caacctcatt gtagtttaac atctctttag 2160 tttcatttct attatctttt agaaaaggat attttaattt tgcttcattc caaaagctgt 2220 caaattgtct tctagaaaga ggtaaccttc caattccaaa ccattttttc ctgcacaaat 2280 ccactattgg tacatcatct aatgaccgct cgaaaacgga aatcttttgc ttatttcttg 2340 ttcttaatct agaaggaacc attgtagact ttgtttctag atccacaata tactccataa 2400 cttccttata ctcttccgca tgggtgaatg ccaagttagg ttctagtttg gtcttacctt 2460 ctttatcaat cttgttatat gccagagctc ttaacaaact cactttacac atatcgccat 2520 ttatatggat tgtgacacaa ggcctagaga tcatatatgc tgatgccgac attaaccggg 2580 ctgttggtgc ctgtcgacct attgattctt tgactccagg ttggaacatt tttaaaaaaa 2640 ccgcaaactt agcttctgac caagctttgt gcctagcata aattagatat ggattcttct 2700 ccacttctaa aatcaattct tctaggtctg ggatgcccat tctccttact tgctcttgcc 2760 ataatttcat gtttgagaat gtaactttag cagatcttaa agctttgctc actgattgat 2820 caggaatttc ttcttcttca tacttggtat ttgactcatg aatgtttgca taagacaagc 2880 cacaaccata gtttgtttgc acaaataatc tgtaaatttg gaactcaaca ccagtgatac 2940 cagcacaaaa gtcagaatct aatggataaa atcctagaga aggatccaac tgatcaatca 3000 tgaatgaaca ggcttttgtt gcaagttttg acgtgtgtaa tcctaatagc aagtagtgca 3060 tccatgcctg acataattga actaatgcca cttctagcac tttacctccc ccttccaaca 3120 cttgggatgc aacattgtag ttgattctta ttctgtcaat aaacctctct gtaactgttg 3180 tctctaagca agctgatacc cacctgaagg ttggtttcac cacattgttc ctcaccatcc 3240 attcagagtt gtattctatt agatccaggc agcctattga agatttggct ctactagtgt 3300 aaattgaaaa gtacttggat acattttcct tccaatgtaa caaagtagtg gccaatctgg 3360 tcttattatg ggatggcagc cctgttaagc tgattagctg agctgagtca tcacttcctt 3420 gaactactgt gatgttgcag tgtatccctc ttctctttaa gtagtctatc tgcaattttt 3480 tcatgacttc ctggatgaga gtgtgtgtga aagagctcgt ataatgtaat attccttgca 3540 tcatgcctga acgtatgaac attttgttac tttgagcttg ctggaagata ccctccccta 3600 aaaaaaactc ttctttcatt ctcatgtaaa tcttatttga cttaacgttc ttgttagctt 3660 gaaaatttgc tgcaaattga acagggaagc ttatcctttt aactttccat agactcatta 3720 catgaatgaa gaaaaaccta aattcaattg ggaggaatgg agaaataacc gcagcaaatt 3780 ttgagctatc attcctttga caccattttg tagcatcagc agacttcccc attgtaaaaa 3840 attgtttccc tagtttgtcg gcagagtctt gataatgttt tttaacaaag gattcttttc 3900 catatgggtg tgttagtgtg tcagagggga ccaatctgca tagagattta ctcatgctct 3960 cacaaaagaa ttgtaggact ctcattttaa tttctaagac atgtatttcc ctatctcctc 4020 cgtgctgtga cttagggaaa atgtcactgt cccaaaatcc cctcttgtct atctctttta 4080 agcagtaggg aattaattca acagggtgtc ttatcttttt acactcaact ttctcaaact 4140 cttccacaag aaggcttatt gattccataa ctctaggtct ctttgttttc tcttttggat 4200 ttgatttttc atataagtct ctcatgacct tattggccat atcttctttg atatttggta 4260 ttattaaaga gtcatcataa gatctggatg acactttcag agtggctagg tcttcaaaag 4320 aacactgtgc catagatttt attatttctt ttttgattat taaagcataa tccttcccta 4380 agatttcaat taatatagat ttaaatatgt gcacaaagac tttgatcata acaggattgc 4440 taacatgtat tttgggttcc aagcttctgc tgaaggtgga agtgactgtg tctctgaacc 4500 tatactcctc agcaacgatc ttcttcatta ttttgaagtt tctatcacta cctctacctc 4560 tttctttact gaccacataa ccaaaataga actcatttac cttctgcttt aaagaaggct 4620 cataatcccc gaaaagactt tttaaacctg agtacactat atcatattct agtgtttctt 4680 tatttggtat tttaagaacc tttgtttctg cataatattg catgtgagaa atagactttt 4740 taaggaaata actagttagt ctagatctta aaacttctgg aagtctttcg cagaacctat 4800 agggatttgg atctaattct tctagtattc ccattgttaa atatctctga tttgtaatca 4860 gttcttcgca atctgtttta ttgtttaaga agagcaagag aattgaagct aaatgttgat 4920 taagaacctt actagataag tctatgttag acaaatcaaa ttctagatga gatattagat 4980 gagaaatgat tgagcagata tatggaccgc ttttaacaaa gtgttctata gatggttcat 5040 tgaaagagca aacatctgta aagaagtatt gattggactc ccaaattgtt ggccctattt 5100 tcccagtctc tatactcttg catgaggatt ttggaaatgc aaaaatagca aaaatatgat 5160 caccagtaca tctaattagt atgtgtatgc cttgatgtat cttatggtaa aaatctgatc 5220 tcttaatcca atatttatga gaataacaaa tttcagtcat aatatttgat actgtctgac 5280 caaaattgca ggcaatagtg tactgtagct tgttaaatat atttaaagat agtgacttct 5340 caccacccca aacttgtttt ccttttttca ttaattggaa aatctctttg gggactatag 5400 tgtgatcaca ttcagctagc agtctggtgt ttacaaactt ggaaatatcc tctgtgtctg 5460 ttagtatagg atgaaagctc ttcttatctt ctgcagattt tgtcactagt tctggatgtt 5520 ggcttaaagc ttttgcccac agtccactct ttgctgcttc aattttatcc gattcagtta 5580 aactcttcac gctaaaagct gcacctttct gtactctatg acgttcatat gtctttactc 5640 ccattgcctc atctaattgt tgctgataag aaaggctttg tggtttagct gaacttgatg 5700 ctccccaaat tttctttaag tatagtggca tatccctgca tgtttcttca tctgtctcag 5760 tgtcagcctg tggttttcta aactgataaa tttgaggtat atttgtcacc cttttgtttg 5820 aaattttgct tgtgtcttca aatttatcca aatatttttt taagtcctca gaattgcatt 5880 cacttccctg tgtagattcc attagagaag ctttaagagc ctttccaacc actctttgat 5940 cctccttagt cacaggatca gacatagaat ttatgactcc aatatcaaaa tcatatttag 6000 attcagtgtt aaacatcaaa cccctaaaga catctttgac aattgcttca tcagcagtta 6060 gatcctctga gaaaacatcc tgaccaatat attcacttat cacagactcc aatgccaatc 6120 ctactctagc tcgataacac aaacagttga caatgtcttg tgtaagctca aaattgcaat 6180 aaactctgga tggggacact atcaagagga aaagagtgta gcctgtaggg tctatcaagt 6240 aagaatactt taccatctta cctgtgtaca tcttctttaa cgcaaagagt tctgatatag 6300 ctgttgtgcc tacttctaaa actgatttaa agtttaaatt aatgtaatca ggagtgaggt 6360 cagattcttc ccctttaatt cctatcttgg ataatggttc atctgtttca aacaacatca 6420 cactgctgac tacttcgtgt ctgatcttcc ttaagttttc agaagacaca tctaactctc 6480 tctctctgcc gtttactttt attgtaaaag ttttcccatt ataagaacat gagtaattag 6540 gttctggcag ttcagagcaa acgtacagag ttggctctat cttgctaagc ttcaaggaac 6600 caacagagaa gtttgaatct accctcaatt tagttgtcat ttctgtaagt agctgattaa 6660 actttgtttt aaagtttggg atctgtgtgt 6690 // ID MK273078; SV 1; linear; viral cRNA; STD; VRL; 2195 BP. XX AC MK273078; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Citrus virus A isolate P1492 segment RNA2 movement protein gene, partial DE cds; and nucleocapsid protein gene, complete cds. XX KW . XX OS Citrus virus A OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; unclassified Bunyavirales. XX RN [1] RP 1-2195 RA Laurence S.D., Flora D., Armelle M., Marie L., Chantal F., Thierry C.; RT "First Report of Citrus Virus A (CiVA) Infecting Pear (Pyrus communis) in RT France"; RL Unpublished. XX RN [2] RP 1-2195 RA Laurence S.D., Flora D., Armelle M., Marie L., Chantal F., Thierry C.; RT ; RL Submitted (10-DEC-2018) to the INSDC. RL Virologie, INRA - UMR 1332 Biologie du Fruit et Pathologie, 71 Avenue RL Edouard Bourleaux cs 20032, Villenave d'ornon 33882, France XX DR MD5; dd05b5485349b9d8573da37655f60434. XX CC ##Assembly-Data-START## CC Assembly Method :: CLC v. 11 CC Sequencing Technology :: Illumina; Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2195 FT /organism="Citrus virus A" FT /segment="RNA2" FT /host="Pyrus communis cv. Packham's Triumph" FT /isolate="P1492" FT /mol_type="viral cRNA" FT /country="France" FT /collection_date="2017" FT /db_xref="taxon:2484986" FT CDS <1..699 FT /codon_start=1 FT /product="movement protein" FT /protein_id="QEE94612.1" FT /translation="YHLLQALHDSRLLSDTSVQSVTFNSNITQKLELSLDYCIPRSSAS FT KITLNIAREQKFLKEGEEWGAVQFLIKLEESDFPYCSNIKEGTAVMALPPAVLDSHNVN FT PNHIDTTIVETQRRKVREIYENGDISNENEPIKEMLGKVSYAKSSISAKVKGQKTNKNF FT GKGWEHMEFRVPKITKDQESEEPEEDGSIATPSLGSGRNSVQEIEEVVGTSGTKKVNFN FT KGVKFNEFGV" FT CDS complement(1010..2122) FT /codon_start=1 FT /product="nucleocapsid protein" FT /protein_id="QEE94613.1" FT /translation="MALHQNPKEQSKFDALFSQATSHGEEHYREFLTKCTKNLKERIKR FT EVNARKMTSGGDFLKSFEQAEDKSGKPDNKEGELEEDEYEDEEQETTEGSGTKKDIVVT FT DAQLAAMWTEIDNIDVSTFDRESTRVFDYQGFNPDEVLRSLIINQRKNKVSAADFKSDI FT LLMCSLAIIKGSINEHNFKKLSTEGQSTVIRLEKTYGIKRGSGRSEPANVVTISRIGAT FT FPGKIIQLLVENKASSRKFMGPLKSHTLPQFIRHQGFAAVIPTTLAESTRMFLLDMVTA FT YSVDQSISISPNKKDKPDLASLYEKQRGFIQTTADNKYPSEIVRKKIFTTIMIDYDSLL FT TTARALLKVIPDLTIVTKENFVSDINATHI" XX SQ Sequence 2195 BP; 665 A; 387 C; 407 G; 736 T; 0 other; taccatcttc ttcaggctct acacgattca agattattgt ctgatacaag tgtccagtca 60 gtcactttca actccaatat aactcagaag ctagagttat ctcttgatta ttgcattcct 120 agaagctctg cttcaaagat aactctgaat atagcaagag agcagaaatt tttgaaagaa 180 ggcgaggagt ggggcgcagt tcagtttcta atcaagttag aagagtctga ctttccctac 240 tgtagtaata tcaaggaagg tacagctgtt atggccttac cacctgcagt tcttgacagt 300 cataatgtta atcctaatca cattgacaca acaatagttg aaactcaaag gagaaaggtg 360 agggagatat atgagaatgg agacatctca aatgaaaatg aacctattaa agaaatgctt 420 ggcaaagttt catatgcaaa gtcttccatt tcagctaagg ttaaaggtca aaagactaac 480 aagaattttg gcaaaggatg ggaacacatg gagtttagag tccctaaaat aacaaaagat 540 caagaatctg aagagcctga agaagatggt agtatagcaa cacctagtct gggaagtgga 600 agaaatagtg ttcaggagat tgaggaagtt gttggcacat cagggactaa aaaagttaac 660 tttaataaag gtgtgaagtt taatgagttt ggagtctagt gtaatttcaa tttgttaaat 720 ttctttctgt tttgttttaa gatgatttct gtcattttta cagattcaaa aaaagaagaa 780 acaaacaaaa aaatcaaaaa atcaaaaatc aaaaagagtg gactctgctg aacaatcaat 840 ttcttgattg ttcagcagag ccccattttt tgattttatt gttttttgat ttttttgttg 900 ttttttcttt tttctgattt ttttgctttt tggttttaat ctaacacact attaaaacaa 960 tgcaaatcat aaaaataaac aaaacttaaa agaagtgaat tgacaagatt taaatgtgag 1020 tggcattgat atcagaaaca aagttctcct ttgtcacgat tgtaagatca ggaataactt 1080 tgagtaaagc tcttgcagta gtgagaaggg agtcataatc tatcatgatt gtagtgaaaa 1140 tcttcttcct cacaatctct gaagggtact tattgtcggc agtggtttga atgaaacctc 1200 tttgtttttc ataaagagat gctaagtctg gtttatcctt cttgtttgga cttatgctga 1260 ttgactgatc aacactataa gctgtcacca tgtccagaag gaacattcta gtagattcag 1320 ctagtgttgt tggtatgact gcagcaaatc cttgatgtct gatgaactgt ggtagagtgt 1380 gagatttaag aggtcccatg aacttcctag aactagcttt gttttccacc aatagctgta 1440 ttatctttcc agggaatgtt gcaccaattc tagagatagt gacaacatta gcaggttcac 1500 tcctaccact gcctctcttg attccataag ttttttcaag ccttataact gttgactgcc 1560 cctcagttga gagttttttg aagttgtgct catttataga tccttttatg attgccaatg 1620 agcacataag caatatatca gatttgaagt cagcagctga aactttgttt ttcctctgat 1680 taatgattaa cgatcttaag acttcatcag gattgaagcc ctgataatca aacactctag 1740 ttgattctct atcaaaagtt gagacatcta tgttatcaat ctcagtccac atagcagcca 1800 attgggcatc agttacaact atgtccttct ttgtcccact accctcagta gtttcctgct 1860 cctcatcttc atattcatct tcttctagtt ctccttcttt gttatccggt ttcccactct 1920 tgtcttcagc ctgctcgaaa ctcttaagaa aatctcctcc agaagtcatc ttcctagcat 1980 tcacttctct cttaatcctt tcttttagat tctttgtgca tttagtgagg aattcacgat 2040 aatgctcttc tccatgagat gttgcttggc taaacagggc atcaaacttg gattgttcct 2100 tgggattttg gtggagtgcc attgctacgc acaactcttg atttagttaa gtttgattga 2160 tattgattat aacaaaagtt atgggttcta tgtgt 2195 // ID MK301475; SV 1; linear; genomic RNA; STD; VRL; 7356 BP. XX AC MK301475; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Coxsackievirus A10 strain R6-19/XY/CHN/2017, complete genome. XX KW . XX OS Coxsackievirus A10 OC Viruses; Riboviria; Picornavirales; Picornaviridae; Enterovirus; OC Enterovirus A. XX RN [1] RP 1-7356 RA Zhang J.; RT ; RL Submitted (14-DEC-2018) to the INSDC. RL Medical Genetics Department, The Institute of Medical Biology, Chinese RL Academy of Medical Sciences and Peking Union Medical College, 935 Jiao Ling RL Road, Kunming, Yunnan 650118, China XX DR MD5; 4de90e2387056cad6deeafa092192086. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..7356 FT /organism="Coxsackievirus A10" FT /host="Homo sapiens" FT /strain="R6-19/XY/CHN/2017" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="Oct-2017" FT /note="RD" FT /db_xref="taxon:42769" FT 5'UTR 1..718 FT CDS 719..7300 FT /codon_start=1 FT /product="polyprotein" FT /protein_id="QDQ16863.1" FT /translation="MGAQVSTQKSGSHETGNVATGGSTINFTNINYYKDSYAASATRQD FT FTQDPKKFTQPVLDSIKELSAPLNSPSVEACGYSDRVAQLTVGNSSITTQEAANIVLAY FT GEWPEYCPDTDATAVDKPTRPDVSVNRFYTLDSKMWQENSTGWYWKFPDVLNKTGVFGQ FT NAQFHYLYRSGFCLHVQCNASKFHQGALLVAVIPEFVIAGRGSNTKPNEAPHPGFTTTF FT PGTTGATFHDPYVLDSGVPLSQALIYPHQWINLRTNNCATVIVPYINAVPFDSAINHSN FT FGLIVIPVSPLKYSSGATTAIPITITIAPLNSEFGGLRQAVSQGIPAELRPGTNQFLTT FT DDDTAAPILPGFTPTPTIHIPGEVHSLLELCRVETILEVNNTTEATGLTRLLIPVSSQN FT KADELCAAFMVDPGRIGPWQSTLVGQICRYYTQWSGSLKVTFMFTGSFMATGKMLVAYS FT PPGSAQPANRETAMLGTHVIWDFGLQSSVSLVIPWISNTHFRTAKTGGNYDYYTAGVVT FT LWYQTNYVVPPETPGEAYIIAMGAAQDNFTLKICKDTDEVTQQAVLQGDPVEDIIHDAL FT GSTARRAISSATNVESAANTTPSSHRLETGRVPALQAAETGATSNATDENMIETRCVVN FT RNGVLETTINHFFSRSGLVGVVNLTDGGTDTTGYATWDIDIMGFVQLRRKCEMFTYMRF FT NAEFTFVTTTDNGEARPYMLQYMYVPPGAPKPTGRDAFQWQTATNPSVFVRLTDPPAQV FT SVPFMSPASAYQWFYDGYPTFGQHPETSNTTYGLCPNNMMGTFAVRIVSKKASQLKLQT FT RVYMKLKHVRAWVPRPIRSQPYLLKNFPNYDSSKITNSARDRSSIKQANMGKFGQQSGA FT IYVGNYRVVNRHLATHNDWANLVWEDSSRDLLVSSTTAQGCDTIARCECQTGVYYCNSR FT RKHYPVSFSKPSLVFIEASEYYPARYQSHLMLAAGHSEPGDCGGILRCQHGVVGIVSTG FT GNGLVGFANVRDLLWLDEEAMEQGVSDYIKGLGDAFGTGFTDAVSREVEALKNYLIGSE FT GAVEKILKNLVKLISALVIVIRSDYDMVTLTATLALIGCHGSPWAWIKAKTASILGIPM FT AQKQSASWLKKFSDMANAAKGLEWISNKISKFIDWLKEKIIPAAKEKVEFLNNLKQLPL FT MENQIANLEQSAASQEDLEVMFGNVSYLAHFCRKFQPLYATEAKRVYALEKRMNNYMQF FT KSKHRIEPVCLIIRGSPGTGKSLATGIIARAIADKYHSSVYSLPPDPDHFDGYKQQVVT FT VMDDLCQNPDGKDMSLFCQMVSTVDFIPPMASLEEKGVSFTSKFVIASTNASNIIVPTV FT SDSDAIRRRFFMDCDIEVTDSYKTDLGRLDAGRAAKLCSENNTANFKRCSPLVCGKAIQ FT LRDRKSKVRYSVDTVVSELVREYSNRSAIGNTIEALFQGPPKFRPIRISLDEKPAPDAI FT SDLLASVDSEEVRQYCRDQGWIIPETPTNVERHLNRAVLVMQSIATVVAVVSLVYVIYK FT LFAGFQGAYSGAPKQALKKPVLRTATVQGPSLDFALSLLRRNIRQVQTDQGHFTMLGVR FT DRLAILPRHSQPGKTIWVEHKLVNVLDAVELVDEQGVNLELTLVTLDTNEKFRDVTKFI FT PENISGASDATLVINTEHMPSMFVPVGDVVQYGFLNLSGKPTHRTMMYNFPTKAGQCGG FT VVTSVGRIIGIHIGGNGRQGFCAGLKRSYFASEQGEIQWVKPNKETGRLNINGPTRTKL FT EPSVFHDVFEGNKEPAVLTSKDPRLEVDFEQALFSKYVGNVLHEPDEYVKQAALHYANQ FT LKQLDINTNKMSMEEACYGTENLEAIDLHTSAGYPYSALGIKKRDILDPTTRDTTKMKF FT YMDKYGLDLPYSTYVKDELRSLDKIKKGKSRLIEASSLNDSVYLRMTFGHLYETFHANP FT GTVTGSAVGCNPDVFWSKLPILLPGSLFAFDYSGYDASLSPVWFRALEMVLRDIGYSEE FT AVSLIEGINHTHHVYRNKTYCVLGGMPSGCSGTSIFNSMINNIIIRTLLIKTFKGIDLD FT ELNMVAYGDDVLASYPFPIDCFELAKAGKEYGLTMTPADKSPCFNEVTWENATFLKRGF FT LPDHQFPFLIHPIMPMKEIHESIRWTKDACNTQDHVRSLCLLAWHNGKDEYEKFVSTIR FT SVPVGKALAIPNFENLRRNWLELF" FT 3'UTR 7301..7356 XX SQ Sequence 7356 BP; 2025 A; 1728 C; 1776 G; 1827 T; 0 other; cgaggggcca ctggggcgct agcactccga ttctgcggaa tctttgtgcg cctgttttat 60 aaccctcccc cgaaacttgt aacttagaag ttatgtacgt taccgatcag cagcaggcgt 120 ggcacaccag ccatgtcttg atcaagcact tctgtacccc cggactgagt atcaatagac 180 tgctcacgtg gtcgaaggag aaaacgttcg ttatccggct aactacttcg agaagcctag 240 tagcgccact gaaactgcgg agtgtttcgc tcagcacttc ccccgtgtag atcaggtcga 300 tgagtcactg ctcaccccac gggcgaccgt ggcagtggct gcgttggcgg cctgcctatg 360 gggcaaccca taggacgctc taaagtggac atggtgcgaa gagtctattg agctagttag 420 tagtcctccg gcccctgaat gcggctaatc ctaactgcgg agcgcatgcc cccaaaccag 480 agggtggtgc gtcgtaacgg gtaactctgc agcggaaccg actactttgg gtgtccgtgt 540 ttcctttatt cttataatgg ctgcttatgg tgacaattga ggaattgtta ccatatagct 600 attggattgg ccatccggtg tgcaacagag ctattatcta cttgtttgtt ggatacattc 660 cattaacacc taaatccttc aatacattac actatattct aacgctgaac gcaagaaaat 720 gggagctcaa gtctcgacgc aaaaatccgg cagtcatgag actggtaatg tagccactgg 780 aggatctaca ataaacttca ctaacatcaa ctactataaa gattcttacg ccgcgtcagc 840 cactcggcaa gacttcacac aagatccaaa gaagttcaca caaccagtgt tagactctat 900 caaagaacta tcagctcctt tgaattcccc ttctgtggag gcttgcggct atagtgatag 960 ggtcgctcag cttaccgttg ggaactcctc catcactacc caagaggctg ctaatattgt 1020 attggcttat ggagagtggc ctgaatactg ccctgacaca gacgcaactg ccgtggataa 1080 gccaactcgc ccggacgtgt ctgtcaacag gttctacact ttggactcta aaatgtggca 1140 agaaaactcg actggttggt attggaagtt ccctgacgtg ctaaacaaga cgggggtgtt 1200 cggacaaaat gcccagtttc attacttgta ccggtcaggt ttctgcttac atgtacagtg 1260 caacgctagt aaattccacc agggggctct tcttgtggct gtgataccag aatttgtgat 1320 tgctggcaga ggatctaaca caaaaccaaa tgaagcaccc cacccagggt ttactacaac 1380 tttccctggt accaccggtg ctacatttca cgatccatac gttctggatt ccggggtacc 1440 attgagtcaa gctctaatat acccccatca atggatcaat ctccgtacca acaattgtgc 1500 aactgttata gtcccataca tcaatgctgt tccgtttgac tcagctatca atcatagcaa 1560 ctttgggcta atagtgatac cagttagtcc gctgaagtat tcgtccgggg caaccactgc 1620 aatcccaatc actatcacta tagcccccct gaattcggag ttcggaggac tacgacaagc 1680 cgttagccaa ggcatcccag ctgagctcag gcccgggact aatcagttcc tgaccacaga 1740 tgacgatacc gcagcgccca tcctcccagg attcaccccc acacccacaa ttcatatacc 1800 aggggaagta cactctttgc tggagttgtg tagggtggag actattttgg aagtgaacaa 1860 caccacagaa gcaacaggat taacaaggct cttaatacca gtgtcctcgc aaaacaaagc 1920 cgatgagttg tgtgctgcgt ttatggttga tccaggccgg attggacctt ggcaatctac 1980 cttagttgga cagatttgcc gttattacac acaatggtcc gggtctttga aagtgacctt 2040 tatgttcaca ggatccttta tggcaacagg caagatgctg gtggcctact ccccgcccgg 2100 aagcgctcaa ccagctaaca gagaaaccgc catgctgggc acgcacgtca tttgggactt 2160 tggactacaa tcatcggtct ctttggtgat accgtggatc agtaacactc actttcgcac 2220 tgccaagaca ggtggaaatt acgattacta cacggcaggt gtagtgacct tgtggtatca 2280 aaccaattac gtggtcccgc cagaaacccc tggagaggcg tatattatag caatgggggc 2340 agcacaagac aacttcactt tgaagatttg caaggatact gatgaagtga cgcaacaagc 2400 tgtgttgcaa ggtgaccctg tggaagatat aatccatgac gctctgggaa gtacagcgcg 2460 cagggctatt agcagtgcta caaatgttga atccgcagct aacaccaccc ccagttcaca 2520 ccgactggag actggacgcg taccagcgct acaggctgca gaaacgggtg ccacttctaa 2580 tgccacagat gagaacatga ttgagacccg ttgtgtggtt aacagaaatg gggtgctgga 2640 aaccactatt aatcatttct tctcccgctc tggattagtg ggagtagtta acctcacaga 2700 tggggggacg gacaccactg ggtatgctac atgggatata gacattatgg gctttgtcca 2760 actccgcaga aagtgcgaga tgttcacata catgagattc aacgcggaat tcacgtttgt 2820 cacaacgact gacaatggag aggctcgccc gtacatgctg caatacatgt atgtgccccc 2880 tggtgcccct aaaccgacgg gaagggatgc cttccaatgg caaacagcaa ctaacccatc 2940 agtctttgtc agactcactg acccccctgc acaagtctca gtccctttca tgtcaccagc 3000 tagtgcatat cagtggtttt atgatggtta tcccactttt ggccagcacc cggagacctc 3060 aaacacaacg tacgggttgt gcccaaacaa tatgatgggc acttttgcgg tgagaattgt 3120 tagcaagaag gcaagtcaac taaaactaca gactagagtg tacatgaagc ttaagcatgt 3180 gagggcttgg gtcccaagac cgatcaggtc tcagccatac ttgcttaaaa acttccccaa 3240 ttacgacagt agcaaaatta ccaacagtgc acgggaccga tctagtatca agcaagctaa 3300 tatgggtaaa tttgggcaac aatctggcgc catctacgtt ggtaactaca gagtggtcaa 3360 tagacacttg gccacccaca atgactgggc caacctggtg tgggaagata gttctcgaga 3420 cttgcttgtc tcgtctacca ctgcccaggg ttgtgatacg attgcccgtt gtgagtgtca 3480 gacaggggtg tactattgta actcaaggag gaagcattat ccagtcagct tctcaaaacc 3540 cagcctcgtc ttcatagagg ccagtgagta ttaccctgct agatatcaat ctcacttaat 3600 gcttgctgca ggccactctg aacctggaga ttgcgggggt atcttgaggt gtcaacatgg 3660 tgtagtcggc atagtatcta ctggtggcaa cggtcttgtc ggttttgcaa acgtgaggga 3720 cctcttatgg ttggatgaag aagccatgga acagggagtg tctgactaca ttaagggact 3780 cggcgacgct tttggtactg gtttcactga cgcagtgtct agggaagtgg aggctttgaa 3840 aaattacctg attggttccg agggagcggt ggagaagatc ctgaagaatt tggtgaaact 3900 catatcagct ttggtcatag ttatcagaag cgactatgac atggtcactc ttaccgcaac 3960 tctagctctg attgggtgtc acgggagccc atgggcgtgg attaaagcaa agacggcatc 4020 catcttaggt attcctatgg cacagaagca gagtgcatct tggcttaaga agttcagtga 4080 tatggcgaat gccgcaaagg ggttggagtg gatctctaat aaaatcagta aatttattga 4140 ctggcttaag gaaaagatca ttccagctgc aaaggaaaaa gttgagtttc ttaacaatct 4200 caagcaactg cccttgatgg aaaaccaaat tgctaactta gaacagtctg ctgcttcaca 4260 agaagacctc gaagtcatgt ttggtaatgt gtcataccta gctcactttt gtcgcaagtt 4320 ccagccactc tatgcaactg aagcgaagag agtgtacgcc ttagagaaga gaatgaataa 4380 ttacatgcag ttcaagagca aacaccgtat tgaacctgta tgtttaatta tcaggggctc 4440 accaggaact ggcaagtcac tcgccacagg tataatagca agagccattg ctgacaaata 4500 ccactctagt gtgtactccc tcccgccaga tccagatcac tttgatggat acaagcagca 4560 ggtggtgaca gtcatggatg atttgtgtca aaacccagat ggcaaagaca tgtcattgtt 4620 ttgccaaatg gtatccactg tcgattttat acccccaatg gcttcactgg aagagaaagg 4680 cgtatccttc acatctaaat ttgttattgc ttcaactaac gctagcaaca tcattgtccc 4740 cacggtctca gactctgacg ctattcgaag gagattcttc atggattgtg acatcgaagt 4800 gactgactct tacaagacag acttaggccg cttagatgcg ggtagggccg caaagctctg 4860 ctcagagaat aacaccgcca atttcaagag gtgcagcccg ttagtgtgcg gtaaagccat 4920 ccaactgaga gataggaagt ccaaagtcag gtatagtgta gacactgtgg tatcagagtt 4980 ggttagggag tatagtaata ggtctgctat aggaaatact atagaggctt tattccaagg 5040 gcctcctaaa tttaggccta taagaattag ccttgatgag aaacccgctc cagatgctat 5100 tagcgacctg cttgctagcg ttgacagtga ggaggtgcgg cagtactgca gagatcaagg 5160 atggataata cctgaaacgc caaccaatgt ggagcggcat ctcaataggg cagtgttagt 5220 gatgcaatct atcgctactg tagtcgcagt tgtgtccctt gtttatgtta tttacaagct 5280 atttgctggt ttccaaggcg catattctgg agcgcccaag caagctctca agaaacctgt 5340 gttgagaaca gccactgttc aagggcccag cttagatttt gccctgtctc tcctgcgacg 5400 taacatcagg caggtgcaaa ctgaccaagg gcactttacc atgcttgggg tacgtgaccg 5460 ccttgctatc ttgcctcgtc actcacaacc agggaagact atctgggttg agcacaagtt 5520 ggtcaatgtg cttgatgctg ttgagctagt ggatgaacaa ggtgttaatt tggagcttac 5580 actagtaacc ctagacacca atgagaagtt tagagacgtc accaagttca ttccagagaa 5640 tatcagtgga gccagtgatg ccacattagt aatcaacact gaacacatgc catcaatgtt 5700 tgtcccggta ggggatgtcg ttcaatacgg gttcctaaat cttagtggta agccaaccca 5760 caggaccatg atgtacaatt tccctacaaa ggctggacag tgtggaggcg tggtaacatc 5820 tgtcggtaga atcattggca tccacattgg gggcaatggg cgacaaggct tttgcgctgg 5880 cctgaaaagg agttatttcg caagtgaaca aggtgagatc caatgggtga aacctaacaa 5940 ggagaccggc agattaaata tcaatggtcc aacacgcacc aagttagagc ccagtgtgtt 6000 ccatgatgtg tttgagggca acaaggagcc agcagtccta acaagcaagg accccagatt 6060 agaggttgac tttgagcaag ccctcttctc caagtatgtg ggtaatgtcc tccacgaacc 6120 tgatgaatat gtgaagcagg cagccctcca ctacgcaaat cagctcaagc aactggatat 6180 aaacaccaat aagatgagca tggaggaagc gtgctatggc acagagaacc tggaagcaat 6240 cgatctccac actagcgcag ggtacccata cagtgctctg ggcataaaga agagggacat 6300 actagatcct accactaggg acacaacaaa aatgaagttt tacatggata agtatggttt 6360 ggacttaccg tactccacct atgtcaaaga tgaacttagg tctctggaca agattaagaa 6420 agggaaatcc cgcttaatag aagctagcag cctgaatgac tcagtgtacc ttagaatgac 6480 ttttggccat ctgtatgaaa cattccatgc aaatccaggg actgtgaccg gatcagcggt 6540 tgggtgcaat ccggatgtgt tctggagtaa actcccaatc ctactcccag gctcgctatt 6600 tgcctttgac tattcaggct acgatgccag tcttagcccc gtctggttca gggctttgga 6660 gatggtcttg cgggacattg gttactcaga ggaagcagtg tcactcatag aaggaataaa 6720 tcatactcat catgtgtacc ggaacaaaac atattgtgtc cttggcggga tgccgtcagg 6780 atgttctggc acctccattt tcaactcgat gatcaacaac atcatcatca ggacgctttt 6840 gattaaaaca tttaaaggga tagatttaga cgagttgaat atggtggcct atggggatga 6900 tgtgctagct agttatcctt tccccattga ttgctttgag ctagctaaag ctggcaaaga 6960 atatgggctg actatgacac ctgcagacaa gtcaccttgc tttaacgaag tgacgtggga 7020 aaacgccacc tttctgaaga gagggtttct accagaccat caattcccat tcttgattca 7080 tcccataatg cccatgaaag agatccacga atccatacgc tggaccaagg atgcgtgcaa 7140 cacccaagac catgtacgct ccctgtgttt actagcttgg cataacggta aggatgaata 7200 tgaaaaattt gtgagtacaa ttagatcagt cccagttggg aaagcattgg ctattccgaa 7260 ctttgaaaat ctgagaagaa attggctcga actattttaa atttacagtt ggaagctgaa 7320 ccccaccaga aatctggtcg tttaagactg gttccc 7356 // ID MK301476; SV 1; linear; genomic RNA; STD; VRL; 7359 BP. XX AC MK301476; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Coxsackievirus A10 strain V6-19/XY/CHN/2017-P1, complete genome. XX KW . XX OS Coxsackievirus A10 OC Viruses; Riboviria; Picornavirales; Picornaviridae; Enterovirus; OC Enterovirus A. XX RN [1] RP 1-7359 RA Zhang J.; RT ; RL Submitted (14-DEC-2018) to the INSDC. RL Medical Genetics Department, The Institute of Medical Biology, Chinese RL Academy of Medical Sciences and Peking Union Medical College, 935 Jiao Ling RL Road, Kunming, Yunnan 650118, China XX DR MD5; e7c561a12bd8e44454e1a064ee3507fd. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..7359 FT /organism="Coxsackievirus A10" FT /host="Homo sapiens" FT /strain="V6-19/XY/CHN/2017-P1" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="Sep-2018" FT /note="Vero" FT /db_xref="taxon:42769" FT 5'UTR 1..718 FT CDS 719..7300 FT /codon_start=1 FT /product="polyprotein" FT /protein_id="QDQ16864.1" FT /translation="MGAQVSTQKSGSHETGNVATGGSTINFTNINYYKDSYAASATRQD FT FTQDPKKFTQPVIDSIKELSAPLNSPSVEACGYSDRVAQLTVGNSSITTQEAANIVLAY FT GEWPEYCPDTDATAVDKPTRPDVSVNRFYTLDSKMWQENSTGWYWKFPDVLNKTGVFGQ FT NAQFHYLYRSGFCLHVQCNASKFHQGALLVAVIPEFVIAGRGSNTKPNEAPHPGFTTTF FT PGTTGATFHDPYVLDSGVPLSQALIYPHQWINLRTNNCATVIVPYINAVPFDSAINHSN FT FGLIVIPVSPLKYSSGATTAIPITITIAPLNSEFGGLRQAVSQGIPAELRPGTNQFLTT FT DDDTAAPILPGFTPTPTIHIPGEVHSLLELCRVETILEVNNTTEATGLTRLLIPVSSQN FT KADELCAAFMVDPGRIGPWQSTLVGQICRYYTQWSGSLKVTFMFTGSFMATGKMLVAYS FT PPGSAQPANRETAMLGTHVIWDFGLQSSVSLVIPWISNTHFRTAKTGGNYDYYTAGVVT FT LWYQTNYVVPPETPGEAYIIAMGAAQDNFTLKICKDTDEVTQQAVLQGDPVEDIIHDAL FT GSTARRAISSATNVESAANTTPSSHRLETGRVPALQAAETGATSNATDENMIETRCVVN FT RNGVLETTINHFFSRSGLVGVVNLTDGGADTTGYATWDIDIMGFVQLRRKCEMFTYMRF FT NAEFTFVTTIDNGEARPYMLQYMYVPPGAPKPTGRDAFQWQTATNPSVFVKLTDPPAQV FT SVPFMSPASAYQWFYDGYPTFGQHPETSNTTYGLCPNNMMGTFAVRIVSKKASQLKLQT FT RVYMKLKHVRAWVPRPIRSQPYLLKNFPNYDSSKITNSARDRSSIKQANMGKFGQQSGA FT IYVGNYRVVNRHLATHNDWANLVWEDSSRDLLVSSTTAQGCDTIARCECQTGVYYCNSR FT RKHYPVSFSKPSLVFIEASEYYPARYQSHLMLAAGHSEPGDCGGILRCQHGVVGIVSTG FT GNGLVGFANVRDLLWLDEEAMEQGVSDYIKGLGDAFGTGFTDAVSREVEALKNYLIGSE FT GAVEKILKNLVKLISALVIVIRSDYDMVTLTATLALIGCHGSPWAWIKAKTASILGIPM FT AQKQSASWLKKFSDMANAAKGLEWISNKISKFIDWLKEKIIPAAKEKVEFLNNLKQLPL FT MENQIANLEQSAASQEDLEVMFGNVSYLAHFCRKFQPLYATEAKRVYALEKRMNNYMQF FT KSKHRIEPVCLIIRGSPGTGKSLATGIIARAIADKYHSSVYSLPPDPDHFDGYKQQVVT FT VMDDLCQNPDGKDMSLFCQMVSTVDFIPPMASLEEKGVSFTSKFVIASTNASNIIVPTV FT SDSDAIRRRFFMDCDIEVTDSYKTDLGRLDAGRAAKLCSENNTANFKRCSPLVCGKAIQ FT LRDRKSKVRYSVDTVVSELVREYSNRSAIGNTIEALFQGPPKFRPIRISLDEKPAPDAI FT SDLLASVDSEEVRQYCRDQGWIIPETPTNVERHLNRAVLVMQSIATVVAVVSLVYVIYK FT LFAGFQGAYSGAPKQALKKPVLRTATVQGPSLDFALSLLRRNIRQVQTDQGHFTMLGVR FT DRLAILPRHSQPGKTIWVEHKLVNVLDAVELVDEQGVNLELTLVTLDTNEKFRDVTKFI FT PENISGASDATLVINTEHMPSMFVPVGDVVQYGFLNLSGKPTHRTMMYNFPTKAGQCGG FT VVTSVGRIIGIHIGGNGRQGFCAGLKRSYFASEQGEIQWVKPNKETGRLNINGPTRTKL FT EPSVFHDVFEGNKEPAVLTSKDPRLEVDFEQALFSKYVGNVLHEPDEYVKQAALHYANQ FT LKQLDINTNKMSMEEACYGTENLEAIDLHTSAGYPYSALGIKKRDILDPTTRDTTKMKF FT YMDKYGLDLPYSTYVKDELRSLDKIKKGKSRLIEASSLNDSVYLRMTFGHLYETFHANP FT GTVTGSAVGCNPDVFWSKLPILLPGSLFAFDYSGYDASLSPVWFRALEMVLRDIGYSEE FT AVSLIEGINHTHHVYRNKTYCVLGGMPSGCSGTSIFNSMINNIIIRTLLIKTFKGIDLD FT ELNMVAYGDDVLASYPFPIDCFELAKAGKEYGLTMTPADKSPCFNEVTWENATFLKRGF FT LPDHQFPFLIHPIMPMKEIHESIRWTKDACNTQDHVRSLCLLAWHNGKDEYEKFVSTIR FT SVPVGKALAIPNFENLRRNWLELF" FT 3'UTR 7301..7359 XX SQ Sequence 7359 BP; 2025 A; 1726 C; 1779 G; 1829 T; 0 other; ggaggggcca ctggggcgct agcactccga ttctgcggaa tctttgtgcg cctgttttat 60 aaccctcccc cgaaacttgt aacttagaag ttatgtacgt taccgatcag cagcaggcgt 120 ggcacaccag ccatgtcttg atcaagcact tctgtacccc cggactgagt atcaatagac 180 tgctcacgtg gtcgaaggag aaaacgttcg ttatccggct aactacttcg agaagcctag 240 tagcgccact gaaactgcgg agtgtttcgc tcagcacttc ccccgtgtag atcaggtcga 300 tgagtcactg ctcaccccac gggcgaccgt ggcagtggct gcgttggcgg cctgcctatg 360 gggcaaccca taggacgctc taaagtggac atggtgcgaa gagtctattg agctagttag 420 tagtcctccg gcccctgaat gcggctaatc ctaactgcgg agcgcatgcc cccaaaccag 480 agggtggtgc gtcgtaacgg gtaactctgc agcggaaccg actactttgg gtgtccgtgt 540 ttcctttatt cttataatgg ctgcttatgg tgacaattga ggaattgtta ccatatagct 600 attggattgg ccatccggtg tgcaacagag ctattgtcta cttgtttgtt ggatacattc 660 cattaacacc taaatccttc aatacattac actatattct aacgctgaac gcaagaaaat 720 gggagctcaa gtctcgacgc aaaaatccgg cagtcatgag actggtaatg tagccactgg 780 aggatctaca ataaacttca ctaacatcaa ctactataaa gattcttacg ccgcgtcagc 840 cactcggcaa gacttcacac aagatccaaa gaagttcaca caaccagtga tagactctat 900 caaagaacta tcagctcctt tgaattcccc ttctgtggag gcttgcggct atagtgatag 960 ggtcgctcag cttaccgttg ggaactcctc catcactacc caagaggctg ctaatattgt 1020 attggcttat ggagagtggc ctgaatactg ccctgacaca gacgcaactg ccgtggataa 1080 gccaactcgc ccggacgtgt ctgtcaacag gttctacact ttggactcta aaatgtggca 1140 agaaaactcg actggttggt attggaagtt ccctgacgtg ctaaacaaga cgggggtgtt 1200 cggacaaaat gcccagtttc attacttgta ccggtcaggt ttctgcttac atgtacagtg 1260 caacgctagt aaattccacc agggggctct tcttgtggct gtgataccag aatttgtgat 1320 tgctggcaga ggatctaaca caaaaccaaa tgaagcaccc cacccagggt ttactacaac 1380 tttccctggt accaccggtg ctacatttca cgatccatac gttctggatt ccggggtacc 1440 attgagtcaa gctctaatat acccccatca atggatcaat ctccgtacca acaattgtgc 1500 aactgttata gtcccataca tcaatgctgt tccgtttgac tcagctatca atcatagcaa 1560 ctttgggcta atagtgatac cagttagtcc gctgaagtat tcgtccgggg caaccactgc 1620 aatcccaatc actatcacta tagcccccct gaattcggag ttcggaggac tacgacaagc 1680 cgttagccaa ggcatcccag ctgagctcag gcccgggact aatcagttcc tgaccacaga 1740 tgacgatacc gcagcgccca tcctcccagg attcaccccc acacccacaa ttcatatacc 1800 aggggaagta cactctttgc tggagttgtg tagggtggag actattttgg aagtgaacaa 1860 caccacagaa gcaacaggat taacaaggct cttaatacca gtgtcctcgc aaaacaaagc 1920 cgatgagttg tgtgctgcgt ttatggttga tccaggccgg attggacctt ggcaatctac 1980 cttagttgga cagatttgcc gttattacac acaatggtcc gggtctttga aagtgacctt 2040 tatgttcaca ggatccttta tggcaacagg caagatgctg gtggcctact ccccgcccgg 2100 aagcgctcaa ccagctaaca gagaaaccgc catgctgggc acgcacgtca tttgggactt 2160 tggactacaa tcatcggtct ctttggtgat accgtggatc agtaacactc actttcgcac 2220 tgccaagaca ggtggaaatt acgattacta cacggcaggt gtagtgacct tgtggtatca 2280 aaccaattac gtggtcccgc cagaaacccc tggagaggcg tatattatag caatgggggc 2340 agcacaagac aacttcactt tgaagatttg caaggatact gatgaagtga cgcaacaagc 2400 tgtgttgcaa ggtgaccctg tggaagatat aatccatgac gctctgggaa gtacggcgcg 2460 cagggctatt agcagtgcta caaatgttga atccgcagct aacaccaccc ccagttcaca 2520 ccgactggag actggacgcg taccagcgct acaggctgca gaaacgggtg ccacttctaa 2580 tgccacagat gagaacatga ttgagacccg ttgtgtggtt aacagaaatg gggtgctgga 2640 aaccactatt aatcatttct tctcccgctc tggattagtg ggagtagtta acctcacaga 2700 tgggggggcg gacaccactg ggtatgctac atgggatata gacattatgg gctttgtcca 2760 actccgcaga aagtgcgaga tgttcacata catgagattc aacgcggaat tcacgtttgt 2820 cacaacgatt gacaatggag aggctcgccc gtacatgctg caatacatgt atgtgccccc 2880 tggtgcccct aaaccgacgg gaagggatgc cttccaatgg caaacagcaa ctaacccatc 2940 agtctttgtc aaactcactg acccccctgc acaagtctca gtccctttca tgtcaccagc 3000 tagtgcatat cagtggtttt atgatggtta tcccactttt ggccagcacc cggagacctc 3060 aaacacaacg tacgggttgt gcccaaacaa tatgatgggc acttttgcgg tgagaattgt 3120 tagcaagaag gcaagtcaac taaaactaca gactagagtg tacatgaagc ttaagcatgt 3180 gagggcttgg gtcccaagac cgatcaggtc tcagccatac ttgcttaaaa acttccccaa 3240 ttacgacagt agcaaaatta ccaacagtgc acgggaccga tctagtatca agcaagctaa 3300 tatgggtaaa tttgggcaac aatctggcgc catctacgtt ggtaactaca gagtggtcaa 3360 tagacacttg gccacccaca atgactgggc caacctggtg tgggaagata gttctcgaga 3420 cttgcttgtc tcgtctacca ctgcccaggg ttgtgatacg attgcccgtt gtgagtgtca 3480 gacaggggtg tactattgta actcaaggag gaagcattat ccagtcagct tctcaaaacc 3540 cagcctcgtc ttcatagagg ccagtgagta ttaccctgct agatatcaat ctcacttaat 3600 gcttgctgca ggccactctg aacctggaga ttgcgggggt atcttgaggt gtcaacatgg 3660 tgtagtcggc atagtatcta ctggtggcaa cggtcttgtc ggttttgcaa acgtgaggga 3720 cctcttatgg ttggatgaag aagccatgga acagggagtg tctgactaca ttaagggact 3780 cggcgacgct tttggtactg gtttcactga cgcagtgtct agggaagtgg aggctttgaa 3840 aaattacctg attggttccg agggagcggt ggagaagatc ctgaagaatt tggtgaaact 3900 catatcagct ttggtcatag ttatcagaag cgactatgac atggtcactc ttaccgcaac 3960 tctagctctg attgggtgtc acgggagccc atgggcgtgg attaaagcaa agacggcatc 4020 catcttaggt attcctatgg cacagaagca gagtgcatct tggcttaaga agttcagtga 4080 tatggcgaat gccgcaaagg ggttggagtg gatctctaat aaaatcagta aatttattga 4140 ctggcttaag gaaaagatca ttccagctgc aaaggaaaaa gttgagtttc ttaacaatct 4200 caagcaactg cccttgatgg aaaaccaaat tgctaactta gaacagtctg ctgcttcaca 4260 agaagacctc gaagtcatgt ttggtaatgt gtcataccta gctcactttt gtcgcaagtt 4320 ccagccactc tatgcaactg aagcgaagag agtgtacgcc ttagagaaga gaatgaataa 4380 ttacatgcag ttcaagagca aacaccgtat tgaacctgta tgtttaatta tcaggggctc 4440 accaggaact ggcaagtcac tcgccacagg tataatagca agagccattg ctgacaaata 4500 ccactctagt gtgtactccc tcccgccaga tccagatcac tttgatggat acaagcagca 4560 ggtggtgaca gtcatggatg atttgtgtca aaacccagat ggcaaagaca tgtcattgtt 4620 ttgccaaatg gtatccactg tcgattttat acccccaatg gcttcactgg aagagaaagg 4680 cgtatccttc acatctaaat ttgttattgc ttcaactaac gctagtaaca tcattgtccc 4740 cacggtctca gactctgacg ctattcgaag gagattcttc atggattgtg acatcgaagt 4800 gactgactct tacaagacag acttaggccg cttagatgcg ggtagggccg caaagctctg 4860 ctcagagaat aacaccgcca atttcaagag gtgcagcccg ttagtgtgcg gtaaagccat 4920 ccaactgaga gataggaagt ccaaagtcag gtatagtgta gacactgtgg tatcagagtt 4980 ggttagggag tatagtaata ggtctgctat aggaaatact atagaggctt tattccaagg 5040 gcctcctaaa tttaggccta taagaattag ccttgatgag aaacccgctc cagatgctat 5100 tagcgacctg cttgctagcg ttgacagtga ggaggtgcgg cagtactgca gagatcaagg 5160 atggataata cctgaaacgc caaccaatgt ggagcggcat ctcaataggg cagtgttagt 5220 gatgcaatct atcgctactg tagtcgcagt tgtgtccctt gtttatgtta tttacaagct 5280 atttgctggt ttccaaggcg catattctgg agcgcccaag caagctctca agaaacctgt 5340 gttgagaaca gccactgttc aagggcccag cttagatttt gccctgtctc tcctgcgacg 5400 taacatcagg caggtgcaaa ctgaccaagg gcactttacc atgcttgggg tacgtgaccg 5460 ccttgctatc ttgcctcgtc actcacaacc agggaagact atctgggttg agcacaagtt 5520 ggtcaatgtg cttgatgctg ttgagctagt ggatgaacaa ggtgttaatt tggagcttac 5580 actagtaacc ctagacacca atgagaagtt tagagacgtc accaagttca ttccagagaa 5640 tatcagtgga gccagtgatg ccacattagt aatcaacact gaacacatgc catcaatgtt 5700 tgtcccggta ggggatgtcg ttcaatacgg gttcctaaat cttagtggta agccaaccca 5760 caggaccatg atgtacaatt tccctacaaa ggctggacag tgtggaggcg tggtaacatc 5820 tgtcggtaga atcattggca tccacattgg gggcaatggg cgacaaggct tttgcgctgg 5880 cctgaaaagg agttatttcg caagtgaaca aggtgagatc caatgggtga aacctaacaa 5940 ggagaccggc agattaaata tcaatggtcc aacacgcacc aagttagagc ccagtgtgtt 6000 ccatgatgtg tttgagggca acaaggagcc agcagtccta acaagcaagg accccagatt 6060 agaggttgac tttgagcaag ccctcttctc caagtatgtg ggtaatgtcc tccacgaacc 6120 tgatgaatat gtgaagcagg cagccctcca ctacgcaaat cagctcaagc aactggatat 6180 aaacaccaat aagatgagca tggaggaagc gtgctatggc acagagaacc tggaagcaat 6240 cgatctccac actagcgcag ggtacccata cagtgctctg ggcataaaga agagggacat 6300 actagatcct accactaggg acacaacaaa aatgaagttt tacatggata agtatggttt 6360 ggacttaccg tactccacct atgtcaaaga tgaacttagg tctctggaca agattaagaa 6420 agggaaatcc cgcttaatag aagctagcag cctgaatgac tcagtgtacc ttagaatgac 6480 ttttggccat ctgtatgaaa cattccatgc aaatccaggg actgtgaccg gatcagcggt 6540 tgggtgcaat ccggatgtgt tctggagtaa actcccaatc ctactcccag gctcgctatt 6600 tgcctttgac tattcaggct acgatgccag tcttagcccc gtctggttca gggctttgga 6660 gatggtcttg cgggacattg gttactcaga ggaagcagtg tcactcatag aaggaataaa 6720 tcatactcat catgtgtacc ggaacaaaac atattgtgtc cttggcggga tgccgtcagg 6780 atgttctggc acctccattt tcaactcgat gatcaacaac atcatcatca ggacgctttt 6840 gattaaaaca tttaaaggga tagatttaga cgagttgaat atggtggcct atggggatga 6900 tgtgctagct agttatcctt tccccattga ttgctttgag ctagctaaag ctggcaaaga 6960 atatgggctg actatgacac ctgcagacaa gtcaccttgc tttaacgaag tgacgtggga 7020 aaacgccacc tttctgaaga gagggtttct accagaccat caattcccat tcttgattca 7080 tcccataatg cccatgaaag agatccacga atccatacgc tggaccaagg atgcgtgcaa 7140 cacccaagac catgtacgct ccctgtgttt actagcttgg cataacggta aggatgaata 7200 tgaaaaattt gtgagtacaa ttagatcagt cccagttggg aaagcattgg ctattccgaa 7260 ctttgaaaat ctgagaagaa attggctcga actattttaa atttcacagt tggaagctga 7320 accccaccag aaatctggtc agtgttaaga cttgttccc 7359 // ID MK301477; SV 1; linear; genomic RNA; STD; VRL; 7362 BP. XX AC MK301477; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Coxsackievirus A10 strain V6-19/XY/CHN/2017-P5, complete genome. XX KW . XX OS Coxsackievirus A10 OC Viruses; Riboviria; Picornavirales; Picornaviridae; Enterovirus; OC Enterovirus A. XX RN [1] RP 1-7362 RA Zhang J.; RT ; RL Submitted (14-DEC-2018) to the INSDC. RL Medical Genetics Department, The Institute of Medical Biology, Chinese RL Academy of Medical Sciences and Peking Union Medical College, 935 Jiao Ling RL Road, Kunming, Yunnan 650118, China XX DR MD5; 59c4569d098e412d3a8ef1bd12064bb3. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..7362 FT /organism="Coxsackievirus A10" FT /host="Homo sapiens" FT /strain="V6-19/XY/CHN/2017-P5" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="Sep-2018" FT /note="Vero" FT /db_xref="taxon:42769" FT 5'UTR 1..721 FT CDS 722..7303 FT /codon_start=1 FT /product="polyprotein" FT /protein_id="QDQ16865.1" FT /translation="MGAQVSTQKSGSHETGNVATGGSTINFTNINYYKDSYAASATRQD FT FTQDPKKFTQPVIDSIKELSAPLNSPSVEACGYSDRVAQLTVGNSSITTQEAANIVLAY FT GEWPEYCPDTDATAVDKPTRPDVSVNRFYTLDSKMWQENSTGWYWKFPDVLNKTGVFGQ FT NAQFHYLYRSGFCLHVQCNASKFHQGALLVAVIPEFVIAGRGSNTKPNEAPHPGFTTTF FT PGTTGATFHDPYVLDSGVPLSQALIYPHQWINLRTNNCATVIVPYINAVPFDSAINHSN FT FGLIVIPVSPLKYSSGATTAIPITITIAPLNSEFGGLRQAVSQGIPAELRPGTNQFLTT FT DDDTAAPILPGFTPTPTIHIPGEVHSLLELCRVETILEVNNTTEATGLTRLLIPVSSQN FT KADELCAAFMVDPGRIGPWQSTLVGQICRYYTQWSGSLKVTFMFTGSFMATGKMLVAYS FT PPGSAQPANRETAMLGTHVIWDFGLQSSVSLVIPWISNTHFRTAKTGGNYDYYTAGVVT FT LWYQTNYVVPPETPGEAYIIAMGAAQDNFTLKICKDTDEVTQQAVLQGDPVEDIIHDAL FT GSTARRAISSATNVESAANTTPSSHRLETGRVPALQAAETGATSNATDENMIETRCVVN FT RNGVLETTINHFFSRSGLVGVVNLTDGGADTTGYATWDIDIMGFVQLRRKCEMFTYMRF FT NAEFTFVTTIDNGEARPYMLQYMYVPPGAPKPTGRDAFQWQTATNPSVFVKLTDPPAQV FT SVPFMSPASAYQWFYDGYPTFGQHPETSNTTYGLCPNNMMGTFAVRIVSKKASQLKLQT FT RVYMKLKHVRAWVPRPIRSQPYLLKNFPNYDSSKITNSARDRSSIKQANMGKFGQQSGA FT IYVGNYRVVNRHLATHNDWANLVWEDSSRDLLVSSTTAQGCDTIARCECQTGVYYCNSR FT RKHYPVSFSKPSLVFIEASEYYPARYQSHLMLAAGHSEPGDCGGILRCQHGVVGIVSTG FT GNGLVGFANVRDLLWLDEEAMEQGVSDYIKGLGDAFGTGFTDAVSREVEALKNYLIGSE FT GAVEKILKNLVKLISALVIVIRSDYDMVTLTATLALIGCHGSPWAWIKAKTASILGIPM FT AQKQSASWLKKFSDMANAAKGLEWISNKISKFIDWLKEKIIPAAKEKVEFLNNLKQLPL FT MENQIANLEQSAASQEDLEVMFGNVSYLAHFCRKFQPLYATEAKRVYALEKRMNNYMQF FT KSKHRIEPVCLIIRGSPGTGKSLATGIIARAIADKYHSSVYSLPPDPDHFDGYKQQVVT FT VMDDLCQNPDGKDMSLFCQMVSTVDFIPPMASLEEKGVSFTSKFVIASTNASNIIVPTV FT SDSDAIRRRFFMDCDIEVTDSYKTDLGRLDAGRAAKLCSENNTANFKRCSPLVCGKAIQ FT LRDRKSKVRYSVDTVVSELVREYSNRSAIGNTIEALFQGPPKFRPIRISLDEKPAPDAI FT SDLLASVDSEEVRQYCRDQGWIIPETPTNVERHLNRAVLVMQSIATVVAVVSLVYVIYK FT LFAGFQGAYSGAPKQALKKPVLRTATVQGPSLDFALSLLRRNIRQVQTDQGHFTMLGVR FT DRLAILPRHSQPGKTIWVEHKLVNVLDAVELVDEQGVNLELTLVTLDTNEKFRDVTKFI FT PENISGASDATLVINTEHMPSMFVPVGDVVQYGFLNLSGKPTHRTMMYNFPTKAGQCGG FT VVTSVGRIIGIHIGGNGRQGFCAGLKRSYFASEQGEIQWVKPNKETGRLNINGPTRTKL FT EPSVFHDVFEGNKEPAVLTSKDPRLEVDFEQALFSKYVGNVLHEPDEYVKQAALHYANQ FT LKQLDINTNKMSMEEACYGTENLEAIDLHTSAGYPYSALGIKKRDILDPTTRDTTKMKF FT YMDKYGLDLPYSTYVKDELRSLDKIKKGKSRLIEASSLNDSVYLRMTFGHLYETFHANP FT GTVTGSAVGCNPDVFWSKLPILLPGSLFAFDYSGYDASLSPVWFRALEMVLRDIGYSEE FT AVSLIEGINHTHHVYRNKTYCVLGGMPSGCSGTSIFNSMINNIIIRTLLIKTFKGIDLD FT ELNMVAYGDDVLASYPFPIDCFELAKAGKEYGLTMTPADKSPCFNEVTWENATFLKRGF FT LPDHQFPFLIHPIMPMKEIHESIRWTKDACNTQDHVRSLCLLAWHNGKDEYEKFVSTIR FT SVPVGKALAIPNFENLRRNWLELF" FT 3'UTR 7304..7362 XX SQ Sequence 7362 BP; 2024 A; 1730 C; 1779 G; 1829 T; 0 other; ccccaggggg ccactggggc gctagcactc cgattctgcg gaatctttgt gcgcctgttt 60 tataaccctc ccccgaaact tgtaacttag aagttatgta cgttaccgat cagcagcagg 120 cgtggcacac cagccatgtc ttgatcaagc acttctgtac ccccggactg agtatcaata 180 gactgctcac gtggtcgaag gagaaaacgt tcgttatccg gctaactact tcgagaagcc 240 tagtagcgcc actgaaactg cggagtgttt cgctcagcac ttcccccgtg tagatcaggt 300 cgatgagtca ctgctcaccc cacgggcgac cgtggcagtg gctgcgttgg cggcctgcct 360 atggggcaac ccataggacg ctctaaagtg gacatggtgc gaagagtcta ttgagctagt 420 tagtagtcct ccggcccctg aatgcggcta atcctaactg cggagcgcat gcccccaaac 480 cagagggtgg tgcgtcgtaa cgggtaactc tgcagcggaa ccgactactt tgggtgtccg 540 tgtttccttt attcttataa tggctgctta tggtgacaat tgaggaattg ttaccatata 600 gctattggat tggccatccg gtgtgcaaca gagctattgt ctacttgttt gttggataca 660 ttccattaac acctaaatcc ttcaatacat tacactatat tctaacgctg aacgcaagaa 720 aatgggagct caagtctcga cgcaaaaatc cggcagtcat gagactggta atgtagccac 780 tggaggatct acaataaact tcactaacat caactactat aaagattctt acgccgcgtc 840 agccactcgg caagacttca cacaagatcc aaagaagttc acacaaccag tgatagactc 900 tatcaaagaa ctatcagctc ctttgaattc cccttctgtg gaggcttgcg gctatagtga 960 tagggtcgct cagcttaccg ttgggaactc ctccatcact acccaagagg ctgctaatat 1020 tgtattggct tatggagagt ggcctgaata ctgccctgac acagacgcaa ctgccgtgga 1080 taagccaact cgcccggacg tgtctgtcaa caggttctac actttggact ctaaaatgtg 1140 gcaagaaaac tcgactggtt ggtattggaa gttccctgac gtgctaaaca agacgggggt 1200 gttcggacaa aatgcccagt ttcattactt gtaccggtca ggtttctgct tacatgtaca 1260 gtgcaacgct agtaaattcc accagggggc tcttcttgtg gctgtgatac cagaatttgt 1320 gattgctggc agaggatcta acacaaaacc aaatgaagca ccccacccag ggtttactac 1380 aactttccct ggtaccaccg gtgctacatt tcacgatcca tacgttctgg attccggggt 1440 accattgagt caagctctaa tataccccca tcaatggatc aatctccgta ccaacaattg 1500 tgcaactgtt atagtcccat acatcaatgc tgttccgttt gactcagcta tcaatcatag 1560 caactttggg ctaatagtga taccagttag tccgctgaag tattcgtccg gggcaaccac 1620 tgcaatccca atcactatca ctatagcccc cctgaattcg gagttcggag gactacgaca 1680 agccgttagc caaggcatcc cagctgagct caggcccggg actaatcagt tcctgaccac 1740 agatgacgat accgcagcgc ccatcctccc aggattcacc cccacaccca caattcatat 1800 accaggggaa gtacactctt tgctggagtt gtgtagggtg gagactattt tggaagtgaa 1860 caacaccaca gaagcaacag gattaacaag gctcttaata ccagtgtcct cgcaaaacaa 1920 agccgatgag ttgtgtgctg cgtttatggt tgatccaggc cggattggac cttggcaatc 1980 taccttagtt ggacagattt gccgttatta cacacaatgg tccgggtctt tgaaagtgac 2040 ctttatgttc acaggatcct ttatggcaac aggcaagatg ctggtggcct actccccgcc 2100 cggaagcgct caaccagcta acagagaaac cgccatgctg ggcacgcacg tcatttggga 2160 ctttggacta caatcatcgg tctctttggt gataccgtgg atcagtaaca ctcactttcg 2220 cactgccaag acaggtggaa attacgatta ctacacggca ggtgtagtga ccttgtggta 2280 tcaaaccaat tacgtggtcc cgccagaaac ccctggagag gcgtatatta tagcaatggg 2340 ggcagcacaa gacaacttca ctttgaagat ttgcaaggat actgatgaag tgacgcaaca 2400 agctgtgttg caaggtgacc ctgtggaaga tataatccat gacgctctgg gaagtacggc 2460 gcgcagggct attagcagtg ctacaaatgt tgaatccgca gctaacacca cccccagttc 2520 acaccgactg gagactggac gcgtaccagc gctacaggct gcagaaacgg gtgccacttc 2580 taatgccaca gatgagaaca tgattgagac ccgttgtgtg gttaacagaa atggggtgct 2640 ggaaaccact attaatcatt tcttctcccg ctctggatta gtgggagtag ttaacctcac 2700 agatgggggg gcggacacca ctgggtatgc tacatgggat atagacatta tgggctttgt 2760 ccaactccgc agaaagtgcg agatgttcac atacatgaga ttcaacgcgg aattcacgtt 2820 tgtcacaacg attgacaatg gagaggctcg cccgtacatg ctgcaataca tgtatgtgcc 2880 ccctggtgcc cctaaaccga cgggaaggga tgccttccaa tggcaaacag caactaaccc 2940 atcagtcttt gtcaaactca ctgacccccc tgcacaagtc tcagtccctt tcatgtcacc 3000 agctagtgca tatcagtggt tttatgatgg ttatcccact tttggccagc acccggagac 3060 ctcaaacaca acgtacgggt tgtgcccaaa caatatgatg ggcacttttg cggtgagaat 3120 tgttagcaag aaggcaagtc aactaaaact acagactaga gtgtacatga agcttaagca 3180 tgtgagggct tgggtcccaa gaccgatcag gtctcagcca tacttgctta aaaacttccc 3240 caattacgac agtagcaaaa ttaccaacag tgcacgggac cgatctagta tcaagcaagc 3300 taatatgggt aaatttgggc aacaatctgg cgccatctac gttggtaact acagagtggt 3360 caatagacac ttggccaccc acaatgactg ggccaacctg gtgtgggaag atagttctcg 3420 agacttgctt gtctcgtcta ccactgccca gggttgtgat acgattgccc gttgtgagtg 3480 tcagacaggg gtgtactatt gtaactcaag gaggaagcat tatccagtca gcttctcaaa 3540 acccagcctc gtcttcatag aggccagtga gtattaccct gctagatatc aatctcactt 3600 aatgcttgct gcaggccact ctgaacctgg agattgcggg ggtatcttga ggtgtcaaca 3660 tggtgtagtc ggcatagtat ctactggtgg caacggtctt gtcggttttg caaacgtgag 3720 ggacctctta tggttggatg aagaagccat ggaacaggga gtgtctgact acattaaggg 3780 actcggcgac gcttttggta ctggtttcac tgacgcagtg tctagggaag tggaggcttt 3840 gaaaaattac ctgattggtt ccgagggagc ggtggagaag atcctgaaga atttggtgaa 3900 actcatatca gctttggtca tagttatcag aagcgactat gacatggtca ctcttaccgc 3960 aactctagct ctgattgggt gtcacgggag cccatgggcg tggattaaag caaagacggc 4020 atccatctta ggtattccta tggcacagaa gcagagtgca tcttggctta agaagttcag 4080 tgatatggcg aatgccgcaa aggggttgga gtggatctct aataaaatca gtaaatttat 4140 tgactggctt aaggaaaaga tcattccagc tgcaaaggaa aaagttgagt ttcttaacaa 4200 tctcaagcaa ctgcccttga tggaaaacca aattgctaac ttagaacagt ctgctgcttc 4260 acaagaagac ctcgaagtca tgtttggtaa tgtgtcatac ctagctcact tttgtcgcaa 4320 gttccagcca ctctatgcaa ctgaagcgaa gagagtgtac gccttagaga agagaatgaa 4380 taattacatg cagttcaaga gcaaacaccg tattgaacct gtatgtttaa ttatcagggg 4440 ctcaccagga actggcaagt cactcgccac aggtataata gcaagagcca ttgctgacaa 4500 ataccactct agtgtgtact ccctcccgcc agatccagat cactttgatg gatacaagca 4560 gcaggtggtg acagtcatgg atgatttgtg tcaaaaccca gatggcaaag acatgtcatt 4620 gttttgccaa atggtatcca ctgtcgattt tataccccca atggcttcac tggaagagaa 4680 aggcgtatcc ttcacatcta aatttgttat tgcttcaact aacgctagta acatcattgt 4740 ccccacggtc tcagactctg acgctattcg aaggagattc ttcatggatt gtgacatcga 4800 agtgactgac tcttacaaga cagacttagg ccgcttagat gcgggtaggg ccgcaaagct 4860 ctgctcagag aataacaccg ccaatttcaa gaggtgcagc ccgttagtgt gcggtaaagc 4920 catccaactg agagatagga agtccaaagt caggtatagt gtagacactg tggtatcaga 4980 gttggttagg gagtatagta ataggtctgc tataggaaat actatagagg ctttattcca 5040 agggcctcct aaatttaggc ctataagaat tagccttgat gagaaacccg ctccagatgc 5100 tattagcgac ctgcttgcta gcgttgacag tgaggaggtg cggcagtact gcagagatca 5160 aggatggata atacctgaaa cgccaaccaa tgtggagcgg catctcaata gggcagtgtt 5220 agtgatgcaa tctatcgcta ctgtagtcgc agttgtgtcc cttgtttatg ttatttacaa 5280 gctatttgct ggtttccaag gcgcatattc tggagcgccc aagcaagctc tcaagaaacc 5340 tgtgttgaga acagccactg ttcaagggcc cagcttagat tttgccctgt ctctcctgcg 5400 acgtaacatc aggcaggtgc aaactgacca agggcacttt accatgcttg gggtacgtga 5460 ccgccttgct atcttgcctc gtcactcaca accagggaag actatctggg ttgagcacaa 5520 gttggtcaat gtgcttgatg ctgttgagct agtggatgaa caaggtgtta atttggagct 5580 tacactagta accctagaca ccaatgagaa gtttagagac gtcaccaagt tcattccaga 5640 gaatatcagt ggagccagtg atgccacatt agtaatcaac actgaacaca tgccatcaat 5700 gtttgtcccg gtaggggatg tcgttcaata cgggttccta aatcttagtg gtaagccaac 5760 ccacaggacc atgatgtaca atttccctac aaaggctgga cagtgtggag gcgtggtaac 5820 atctgtcggt agaatcattg gcatccacat tgggggcaat gggcgacaag gcttttgcgc 5880 tggcctgaaa aggagttatt tcgcaagtga acaaggtgag atccaatggg tgaaacctaa 5940 caaggagacc ggcagattaa atatcaatgg tccaacacgc accaagttag agcccagtgt 6000 gttccatgat gtgtttgagg gcaacaagga gccagcagtc ctaacaagca aggaccccag 6060 attagaggtt gactttgagc aagccctctt ctccaagtat gtgggtaatg tcctccacga 6120 acctgatgaa tatgtgaagc aggcagccct ccactacgca aatcagctca agcaactgga 6180 tataaacacc aataagatga gcatggagga agcgtgctat ggcacagaga acctggaagc 6240 aatcgatctc cacactagcg cagggtaccc atacagtgct ctgggcataa agaagaggga 6300 catactagat cctaccacta gggacacaac aaaaatgaag ttttacatgg ataagtatgg 6360 tttggactta ccgtactcca cctatgtcaa agatgaactt aggtctctgg acaagattaa 6420 gaaagggaaa tcccgcttaa tagaagctag cagcctgaat gactcagtgt accttagaat 6480 gacttttggc catctgtatg aaacattcca tgcaaatcca gggactgtga ccggatcagc 6540 ggttgggtgc aatccggatg tgttctggag taaactccca atcctactcc caggctcgct 6600 atttgccttt gactattcag gctacgatgc cagtcttagc cccgtctggt tcagggcttt 6660 ggagatggtc ttgcgggaca ttggttactc agaggaagca gtgtcactca tagaaggaat 6720 aaatcatact catcatgtgt accggaacaa aacatattgt gtccttggcg ggatgccgtc 6780 aggatgttct ggcacctcca ttttcaactc gatgatcaac aacatcatca tcaggacgct 6840 tttgattaaa acatttaaag ggatagattt agacgagttg aatatggtgg cctatgggga 6900 tgatgtgcta gctagttatc ctttccccat tgattgcttt gagctagcta aagctggcaa 6960 agaatatggg ctgactatga cacctgcaga caagtcacct tgctttaacg aagtgacgtg 7020 ggaaaacgcc acctttctga agagagggtt tctaccagac catcaattcc cattcttgat 7080 tcatcccata atgcccatga aagagatcca cgaatccata cgctggacca aggatgcgtg 7140 caacacccaa gaccatgtac gctccctgtg tttactagct tggcataacg gtaaggatga 7200 atatgaaaaa tttgtgagta caattagatc agtcccagtt gggaaagcat tggctattcc 7260 gaactttgaa aatctgagaa gaaattggct cgaactattt taaatttaca gttggaagct 7320 gaaccccacc agaaatctgg tcgtgttaat gactggttcc cc 7362 // ID MK301478; SV 1; linear; genomic RNA; STD; VRL; 7360 BP. XX AC MK301478; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Coxsackievirus A10 strain V6-19/XY/CHN/2017-P10, complete genome. XX KW . XX OS Coxsackievirus A10 OC Viruses; Riboviria; Picornavirales; Picornaviridae; Enterovirus; OC Enterovirus A. XX RN [1] RP 1-7360 RA Zhang J.; RT ; RL Submitted (14-DEC-2018) to the INSDC. RL Medical Genetics Department, The Institute of Medical Biology, Chinese RL Academy of Medical Sciences and Peking Union Medical College, 935 Jiao Ling RL Road, Kunming, Yunnan 650118, China XX DR MD5; 39677edff811288b2595c20c2ae5c128. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..7360 FT /organism="Coxsackievirus A10" FT /host="Homo sapiens" FT /strain="V6-19/XY/CHN/2017-P10" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="Oct-2018" FT /note="Vero" FT /db_xref="taxon:42769" FT 5'UTR 1..719 FT CDS 720..7301 FT /codon_start=1 FT /product="polyprotein" FT /protein_id="QDQ16866.1" FT /translation="MGAQVSTQKSGSHETGNVATGGSTINFTNINYYKDSYAASATRQD FT FTQDPKKFTQPVIDSIKELSAPLNSPSVEACGYSDRVAQLTVGNSSITTQEAANIVLAY FT GEWPEYCPDTDATAVDKPTRPDVSVNRFYTLDSKMWQENSTGWYWKFPDVLNKTGVFGQ FT NAQFHYLYRSGFCLHVQCNASKFHQGALLVAVIPEFVIAGRGSNTKPNEAPHPGFTTTF FT PGTTGATFHDPYVLDSGVPLSQALIYPHQWINLRTNNCATVIVPYINAVPFDSAINHSN FT FGLIVIPVSPLKYSSGATTAIPITITIAPLNSEFGGLRQAVSQGIPAELRPGTNQFLTT FT DDDTAAPILPGFTPTPTIHIPGEVHSLLELCRVETILEVNNTTEATGLTRLLIPVSSQN FT KADELCAAFMVDPGRIGPWQSTLVGQICRYYTQWSGSLKVTFMFTGSFMATGKMLVAYS FT PPGSAQPANRETAMLGTHVIWDFGLQSSVSLVIPWISNTHFRTAKTGGNYDYYTAGVVT FT LWYQTNYVVPPETPGEAYIIAMGAAQDNFTLKICKDTDEVTQQAVLQGDPVEDIIHDAL FT GSTARRAISSATNVESAANTTPSSHRLETGRVPALQAAETGATSNATDENMIETRCVVN FT RNGVLETTINHFFSRSGLVGVVNLTDGGADTTGYATWDIDIMGFVQLRRKCEMFTYMRF FT NAEFTFVTTIDNGEARPYMLQYMYVPPGAPKPTGRDAFQWQTATNPSVFVKLTDPPAQV FT SVPFMSPASAYQWFYDGYPTFGQHPETSNTTYGLCPNNMMGTFAVRIVSKKASQLKLQT FT RVYMKLKHVRAWVPRPIRSQPYLLKNFPNYDSSKITNSARDRSSIKQANMGKFGQQSGA FT IYVGNYRVVNRHLATHNDWANLVWEDSSRDLLVSSTTAQGCDTIARCECQTGVYYCNSR FT RKHYPVSFSKPSLVFIEASEYYPARYQSHLMLAAGHSEPGDCGGILRCQHGVVGIVSTG FT GNGLVGFANVRDLLWLDEEAMEQGVSDYIKGLGDAFGTGFTDAVSREVEALKNYLIGSE FT GAVEKILKNLVKLISALVIVIRSDYDMVTLTATLALIGCHGSPWAWIKAKTASILGIPM FT AQKQSASWLKKFSDMANAAKGLEWISNKISKFIDWLKEKIIPAAKEKVEFLNNLKQLPL FT MENQIANLEQSAASQEDLEVMFGNVSYLAHFCRKFQPLYATEAKRVYALEKRMNNYMQF FT KSKHRIEPVCLIIRGSPGTGKSLATGIIARAIADKYHSSVYSLPPDPDHFDGYKQQVVT FT VMDDLCQNPDGKDMSLFCQMVSTVDFIPPMASLEEKGVSFTSKFVIASTNASNIIVPTV FT SDSDAIRRRFFMDCDIEVTDSYKTDLGRLDAGRAAKLCSENNTANFKRCSPLVCGKAIQ FT LRDRKSKVRYSVDTVVSELVREYSNRSAIGNTIEALFQGPPKFRPIRISLDEKPAPDAI FT SDLLASVDSEEVRQYCRDQGWIIPETPTNVERHLNRAVLVMQSIATVVAVVSLVYVIYK FT LFAGFQGAYSGAPKQALKKPVLRTATVQGPSLDFALSLLRRNIRQVQTDQGHFTMLGVR FT DRLAILPRHSQPGKTIWVEHKLVNVLDAVELVDEQGVNLELTLVTLDTNEKFRDVTKFI FT PENISGASDATLVINTEHMPSMFVPVGDVVQYGFLNLSGKPTHRTMMYNFPTKAGQCGG FT VVTSVGRIIGIHIGGNGRQGFCAGLKRSYFASEQGEIQWVKPNKETGRLNINGPTRTKL FT EPSVFHDVFEGNKEPAVLTSKDPRLEVDFEQALFSKYVGNVLHEPDEYVKQAALHYANQ FT LKQLDINTNKMSMEEACYGTENLEAIDLHTSAGYPYSALGIKKRDILDPTTRDTTKMKF FT YMDKYGLDLPYSTYVKDELRSLDKIKKGKSRLIEASSLNDSVYLRMTFGHLYETFHANP FT GTVTGSAVGCNPDVFWSKLPILLPGSLFAFDYSGYDASLSPVWFRALEMVLRDIGYSEE FT AVSLIEGINHTHHVYRNKTYCVLGGMPSGCSGTSIFNSMINNIIIRTLLIKTFKGIDLD FT ELNMVAYGDDVLASYPFPIDCFELAKAGKEYGLTMTPADKSPCFNEVTWENATFLKRGF FT LPDHQFPFLIHPIMPMKEIHESIRWTKDACNTQDHVRSLCLLAWHNGKDEYEKFVSTIR FT SVPVGKALAIPNFENLRRNWLELF" FT 3'UTR 7302..7360 XX SQ Sequence 7360 BP; 2025 A; 1727 C; 1778 G; 1830 T; 0 other; cccaggggcc actggggcgc tagcactccg attctgcgga atctttgtgc gcctgtttta 60 taaccctccc ccgaaacttg taacttagaa gttatgtacg ttaccgatca gcagcaggcg 120 tggcacacca gccatgtctt gatcaagcac ttctgtaccc ccggactgag tatcaataga 180 ctgctcacgt ggtcgaagga gaaaacgttc gttatccggc taactacttc gagaagccta 240 gtagcgccac tgaaactgcg gagtgtttcg ctcagcactt cccccgtgta gatcaggtcg 300 atgagtcact gctcacccca cgggcgaccg tggcagtggc tgcgttggcg gcctgcctat 360 ggggcaaccc ataggacgct ctaaagtgga catggtgcga agagtctatt gagctagtta 420 gtagtcctcc ggcccctgaa tgcggctaat cctaactgcg gagcgcatgc ccccaaacca 480 gagggtggtg cgtcgtaacg ggtaactctg cagcggaacc gactactttg ggtgtccgtg 540 tttcctttat tcttataatg gctgcttatg gtgacaattg aggaattgtt accatatagc 600 tattggattg gccatccggt gtgcaacaga gctattgtct acttgtttgt tggatacatt 660 ccattaacac ctaaatcctt caatacatta cactatattc taacgctgaa cgcaagaaaa 720 tgggagctca agtctcgacg caaaaatccg gcagtcatga gactggtaat gtagccactg 780 gaggatctac aataaacttc actaacatca actactataa agattcttac gccgcgtcag 840 ccactcggca agacttcaca caagatccaa agaagttcac acaaccagtg atagactcta 900 tcaaagaact atcagctcct ttgaattccc cttctgtgga ggcttgcggc tatagtgata 960 gggtcgctca gcttaccgtt gggaactcct ccatcactac ccaagaggct gctaatattg 1020 tattggctta tggagagtgg cctgaatact gccctgacac agacgcaact gccgtggata 1080 agccaactcg cccggacgtg tctgtcaaca ggttctacac tttggactct aaaatgtggc 1140 aagaaaactc gactggttgg tattggaagt tccctgacgt gctaaacaag acgggggtgt 1200 tcggacaaaa tgcccagttt cattacttgt accggtcagg tttctgctta catgtacagt 1260 gcaacgctag taaattccac cagggggctc ttcttgtggc tgtgatacca gaatttgtga 1320 ttgctggcag aggatctaac acaaaaccaa atgaagcacc ccacccaggg tttactacaa 1380 ctttccctgg taccaccggt gctacatttc acgatccata cgttctggat tccggggtac 1440 cattgagtca agctctaata tacccccatc aatggatcaa tctccgtacc aacaattgtg 1500 caactgttat agtcccatac atcaatgctg ttccgtttga ctcagctatc aatcatagca 1560 actttgggct aatagtgata ccagttagtc cgctgaagta ttcgtccggg gcaaccactg 1620 caatcccaat cactatcact atagcccccc tgaattcgga gttcggagga ctacgacaag 1680 ccgttagcca aggcatccca gctgagctca ggcccgggac taatcagttc ctgaccacag 1740 atgacgatac cgcagcgccc atcctcccag gattcacccc cacacccaca attcatatac 1800 caggggaagt acactctttg ctggagttgt gtagggtgga gactattttg gaagtgaaca 1860 acaccacaga agcaacagga ttaacaaggc tcttaatacc agtgtcctcg caaaacaaag 1920 ccgatgagtt gtgtgctgcg tttatggttg atccaggccg gattggacct tggcaatcta 1980 ccttagttgg acagatttgc cgttattaca cacaatggtc cgggtctttg aaagtgacct 2040 ttatgttcac aggatccttt atggcaacag gcaagatgct ggtggcctac tccccgcccg 2100 gaagcgctca accagctaac agagaaaccg ccatgctggg cacgcacgtc atttgggact 2160 ttggactaca atcatcggtc tctttggtga taccgtggat cagtaacact cactttcgca 2220 ctgccaagac aggtggaaat tacgattact acacggcagg tgtagtgacc ttgtggtatc 2280 aaaccaatta cgtggtcccg ccagaaaccc ctggagaggc gtatattata gcaatggggg 2340 cagcacaaga caacttcact ttgaagattt gcaaggatac tgatgaagtg acgcaacaag 2400 ctgtgttgca aggtgaccct gtggaagata taatccatga cgctctggga agtacggcgc 2460 gcagggctat tagcagtgct acaaatgttg aatccgcagc taacaccacc cccagttcac 2520 accgactgga gactggacgc gtaccagcgc tacaggctgc agaaacgggt gccacttcta 2580 atgccacaga tgagaacatg attgagaccc gttgtgtggt taacagaaat ggggtgctgg 2640 aaaccactat taatcatttc ttctcccgct ctggattagt gggagtagtt aacctcacag 2700 atgggggggc ggacaccact gggtatgcta catgggatat agacattatg ggctttgtcc 2760 aactccgcag aaagtgcgag atgttcacat acatgagatt caacgcggaa ttcacgtttg 2820 tcacaacgat tgacaatgga gaggctcgcc cgtacatgct gcaatacatg tatgtgcccc 2880 ctggtgcccc taaaccgacg ggaagggatg ccttccaatg gcaaacagca actaacccat 2940 cagtctttgt caaactcact gacccccctg cacaagtctc agtccctttc atgtcaccag 3000 ctagtgcata tcagtggttt tatgatggtt atcccacttt tggccagcac ccggagacct 3060 caaacacaac gtacgggttg tgcccaaaca atatgatggg cacttttgcg gtgagaattg 3120 ttagcaagaa ggcaagtcaa ctaaaactac agactagagt gtacatgaag cttaagcatg 3180 tgagggcttg ggtcccaaga ccgatcaggt ctcagccata cttgcttaaa aacttcccca 3240 attacgacag tagcaaaatt accaacagtg cacgggaccg atctagtatc aagcaagcta 3300 atatgggtaa atttgggcaa caatctggcg ccatctacgt tggtaactac agagtggtca 3360 atagacactt ggccacccac aatgactggg ccaacctggt gtgggaagat agttctcgag 3420 acttgcttgt ctcgtctacc actgcccagg gttgtgatac gattgcccgt tgtgagtgtc 3480 agacaggggt gtactattgt aactcaagga ggaagcatta tccagtcagc ttctcaaaac 3540 ccagcctcgt cttcatagag gccagtgagt attaccctgc tagatatcaa tctcacttaa 3600 tgcttgctgc aggccactct gaacctggag attgcggggg tatcttgagg tgtcaacatg 3660 gtgtagtcgg catagtatct actggtggca acggtcttgt cggttttgca aacgtgaggg 3720 acctcttatg gttggatgaa gaagccatgg aacagggagt gtctgactac attaagggac 3780 tcggcgacgc ttttggtact ggtttcactg acgcagtgtc tagggaagtg gaggctttga 3840 aaaattacct gattggttcc gagggagcgg tggagaagat cctgaagaat ttggtgaaac 3900 tcatatcagc tttggtcata gttatcagaa gcgactatga catggtcact cttaccgcaa 3960 ctctagctct gattgggtgt cacgggagcc catgggcgtg gattaaagca aagacggcat 4020 ccatcttagg tattcctatg gcacagaagc agagtgcatc ttggcttaag aagttcagtg 4080 atatggcgaa tgccgcaaag gggttggagt ggatctctaa taaaatcagt aaatttattg 4140 actggcttaa ggaaaagatc attccagctg caaaggaaaa agttgagttt cttaacaatc 4200 tcaagcaact gcccttgatg gaaaaccaaa ttgctaactt agaacagtct gctgcttcac 4260 aagaagacct cgaagtcatg tttggtaatg tgtcatacct agctcacttt tgtcgcaagt 4320 tccagccact ctatgcaact gaagcgaaga gagtgtacgc cttagagaag agaatgaata 4380 attacatgca gttcaagagc aaacaccgta ttgaacctgt atgtttaatt atcaggggct 4440 caccaggaac tggcaagtca ctcgccacag gtataatagc aagagccatt gctgacaaat 4500 accactctag tgtgtactcc ctcccgccag atccagatca ctttgatgga tacaagcagc 4560 aggtggtgac agtcatggat gatttgtgtc aaaacccaga tggcaaagac atgtcattgt 4620 tttgccaaat ggtatccact gtcgatttta tacccccaat ggcttcactg gaagagaaag 4680 gcgtatcctt cacatctaaa tttgttattg cttcaactaa cgctagtaac atcattgtcc 4740 ccacggtctc agactctgac gctattcgaa ggagattctt catggattgt gacatcgaag 4800 tgactgactc ttacaagaca gacttaggcc gcttagatgc gggtagggcc gcaaagctct 4860 gctcagagaa taacaccgcc aatttcaaga ggtgcagccc gttagtgtgc ggtaaagcca 4920 tccaactgag agataggaag tccaaagtca ggtatagtgt agacactgtg gtatcagagt 4980 tggttaggga gtatagtaat aggtctgcta taggaaatac tatagaggct ttattccaag 5040 ggcctcctaa atttaggcct ataagaatta gccttgatga gaaacccgct ccagatgcta 5100 ttagcgacct gcttgctagc gttgacagtg aggaggtgcg gcagtactgc agagatcaag 5160 gatggataat acctgaaacg ccaaccaatg tggagcggca tctcaatagg gcagtgttag 5220 tgatgcaatc tatcgctact gtagtcgcag ttgtgtccct tgtttatgtt atttacaagc 5280 tatttgctgg tttccaaggc gcatattctg gagcgcccaa gcaagctctc aagaaacctg 5340 tgttgagaac agccactgtt caagggccca gcttagattt tgccctgtct ctcctgcgac 5400 gtaacatcag gcaggtgcaa actgaccaag ggcactttac catgcttggg gtacgtgacc 5460 gccttgctat cttgcctcgt cactcacaac cagggaagac tatctgggtt gagcacaagt 5520 tggtcaatgt gcttgatgct gttgagctag tggatgaaca aggtgttaat ttggagctta 5580 cactagtaac cctagacacc aatgagaagt ttagagacgt caccaagttc attccagaga 5640 atatcagtgg agccagtgat gccacattag taatcaacac tgaacacatg ccatcaatgt 5700 ttgtcccggt aggggatgtc gttcaatacg ggttcctaaa tcttagtggt aagccaaccc 5760 acaggaccat gatgtacaat ttccctacaa aggctggaca gtgtggaggc gtggtaacat 5820 ctgtcggtag aatcattggc atccacattg ggggcaatgg gcgacaaggc ttttgcgctg 5880 gcctgaaaag gagttatttc gcaagtgaac aaggtgagat ccaatgggtg aaacctaaca 5940 aggagaccgg cagattaaat atcaatggtc caacacgcac caagttagag cccagtgtgt 6000 tccatgatgt gtttgagggc aacaaggagc cagcagtcct aacaagcaag gaccccagat 6060 tagaggttga ctttgagcaa gccctcttct ccaagtatgt gggtaatgtc ctccacgaac 6120 ctgatgaata tgtgaagcag gcagccctcc actacgcaaa tcagctcaag caactggata 6180 taaacaccaa taagatgagc atggaggaag cgtgctatgg cacagagaac ctggaagcaa 6240 tcgatctcca cactagcgca gggtacccat acagtgctct gggcataaag aagagggaca 6300 tactagatcc taccactagg gacacaacaa aaatgaagtt ttacatggat aagtatggtt 6360 tggacttacc gtactccacc tatgtcaaag atgaacttag gtctctggac aagattaaga 6420 aagggaaatc ccgcttaata gaagctagca gcctgaatga ctcagtgtac cttagaatga 6480 cttttggcca tctgtatgaa acattccatg caaatccagg gactgtgacc ggatcagcgg 6540 ttgggtgcaa tccggatgtg ttctggagta aactcccaat cctactccca ggctcgctat 6600 ttgcctttga ctattcaggc tacgatgcca gtcttagccc cgtctggttc agggctttgg 6660 agatggtctt gcgggacatt ggttactcag aggaagcagt gtcactcata gaaggaataa 6720 atcatactca tcatgtgtac cggaacaaaa catattgtgt ccttggcggg atgccgtcag 6780 gatgttctgg cacctccatt ttcaactcga tgatcaacaa catcatcatc aggacgcttt 6840 tgattaaaac atttaaaggg atagatttag acgagttgaa tatggtggcc tatggggatg 6900 atgtgctagc tagttatcct ttccccattg attgctttga gctagctaaa gctggcaaag 6960 aatatgggct gactatgaca cctgcagaca agtcaccttg ctttaacgaa gtgacgtggg 7020 aaaacgccac ctttctgaag agagggtttc taccagacca tcaattccca ttcttgattc 7080 atcccataat gcccatgaaa gagatccacg aatccatacg ctggaccaag gatgcgtgca 7140 acacccaaga ccatgtacgc tccctgtgtt tactagcttg gcataacggt aaggatgaat 7200 atgaaaaatt tgtgagtaca attagatcag tcccagttgg gaaagcattg gctattccga 7260 actttgaaaa tctgagaaga aattggctcg aactatttta aatttacagt tggaagctga 7320 accccaccag aaatctggtc gtgtaagact ggtttttacc 7360 // ID MK301479; SV 1; linear; genomic RNA; STD; VRL; 7356 BP. XX AC MK301479; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Coxsackievirus A10 strain V6-19/XY/CHN/2017-P15, complete genome. XX KW . XX OS Coxsackievirus A10 OC Viruses; Riboviria; Picornavirales; Picornaviridae; Enterovirus; OC Enterovirus A. XX RN [1] RP 1-7356 RA Zhang J.; RT ; RL Submitted (14-DEC-2018) to the INSDC. RL Medical Genetics Department, The Institute of Medical Biology, Chinese RL Academy of Medical Sciences and Peking Union Medical College, 935 Jiao Ling RL Road, Kunming, Yunnan 650118, China XX DR MD5; 43ac1cee6daaf05d24708c9ca2eab01b. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..7356 FT /organism="Coxsackievirus A10" FT /host="Homo sapiens" FT /strain="V6-19/XY/CHN/2017-P15" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="Oct-2018" FT /note="Vero" FT /db_xref="taxon:42769" FT 5'UTR 1..718 FT CDS 719..7300 FT /codon_start=1 FT /product="polyprotein" FT /protein_id="QDQ16867.1" FT /translation="MGAQVSTQKSGSHETGNVATGGSTINFTNINYYKDSYAASATRQD FT FTQDPKKFTQPVIDSIKELSAPLNSPSVEACGYSDRVAQLTVGNSSITTQEAANIVLAY FT GEWPEYCPDTDATAVDKPTRPDVSVNRFYTLDSKMWQENSTGWYWKFPDVLNKTGVFGQ FT NAQFHYLYRSGFCLHVQCNASKFHQGALLVAVIPEFVIAGRGSNTKPNEAPHPGFTTTF FT PGTTGATFHDPYVLDSGVPLSQALIYPHQWINLRTNNCATVIVPYINAVPFDSAINHSN FT FGLIVIPVSPLKYSSGATTAIPITITIAPLNSEFGGLRQAVSQGIPAELRPGTNQFLTT FT DDDTAAPILPGFTPTPTIHIPGEVHSLLELCRVETILEVNNTTEATGLTRLLIPVSSQN FT KADELCAAFMVDPGRIGPWQSTLVGQICRYYTQWSGSLKVTFMFTGSFMATGKMLVAYS FT PPGSAQPANRETAMLGTHVIWDFGLQSSVSLVIPWISNTHFRTAKTGGNYDYYTAGVVT FT LWYQTNYVVPPETPGEAYIIAMGAAQDNFTLKICKDTDEVTQQAVLQGDPVEDIIHDAL FT GSTARRAISSATNVESAANTTPSSHRLETGRVPALQAAETGATSNATDENMIETRCVVN FT RNGVLETTINHFFSRSGLVGVVNLTDGGADTTGYATWDVDIMGFVQLRRKCEMFTYMRF FT NAEFTFVTTIDNGEARPYMLQYMYVPPGAPKPTGRDAFQWQTATNPSVFVKLTDPPAQV FT SVPFMSPASAYQWFYDGYPTFGQHPETSNTTYGLCPNNMMGTFAVRIVSKKASQLKLQT FT RVYMKLKHVRAWVPRPIRSQPYLLKNFPNYDSSKITNSARDRSSIKQANMGKFGQQSGA FT IYVGNYRVVNRHLATHNDWANLVWEDSSRDLLVSSTTAQGCDTIARCECQTGVYYCNSR FT RKHYPVSFSKPSLVFIEASEYYPARYQSHLMLAAGHSEPGDCGGILRCQHGVVGIVSTG FT GNGLVGFANVRDLLWLDEEAMEQGVSDYIKGLGDAFGTGFTDAVSREVEALKNYLIGSE FT GAVEKILKNLVKLISALVIVIRSDYDMVTLTATLALIGCHGSPWAWIKAKTASILGIPM FT AQKQSASWLKKFSDMANAAKGLEWISNKISKFIDWLKEKIIPAAKEKVEFLNNLKQLPL FT MENQIANLEQSAASQEDLEVMFGNVSYLAHFCRKFQPLYATEAKRVYALEKRMNNYMQF FT KSKHRIEPVCLIIRGSPGTGKSLATGIIARAIADKYHSSVYSLPPDPDHFDGYKQQVVT FT VMDDLCQNPDGKDMSLFCQMVSTVDFIPPMASLEEKGVSFTSKFVIASTNASNIIVPTV FT SDSDAIRRRFFMDCDIEVTDSYKTDLGRLDAGRAAKLCSENNTANFKRCSPLVCGKAIQ FT LRDRKSKVRYSVDTVVSELVREYSNRSAIGNTIEALFQGPPKFRPIRISLDEKPAPDAI FT SDLLASVDSEEVRQYCRDQGWIIPETPTNVERHLNRAVLVMQSIATVVAVVSLVYVIYK FT LFAGFQGAYSGAPKQALKKPVLRTATVQGPSLDFALSLLRRNIRQVQTDQGHFTMLGVR FT DRLAILPRHSQPGKTIWVEHKLVNVLDAVELVDEQGVNLELTLVTLDTNEKFRDVTKFI FT PENISGASDATLVINTEHMPSMFVPVGDVVQYGFLNLSGKPTHRTMMYNFPTKAGQCGG FT VVTSVGRIIGIHIGGNGRQGFCAGLKRSYFASEQGEIQWVKPNKETGRLNINGPTRTKL FT EPSVFHDVFEGNKEPAVLTSKDPRLEVDFEQALFSKYVGNVLHEPDEYVKQAALHYANQ FT LKQLDINTNKMSMEEACYGTENLEAIDLHTSAGYPYSALGIKKRDILDPTTRDTTKMKF FT YMDKYGLDLPYSTYVKDELRSLDKIKKGKSRLIEASSLNDSVYLRMTFGHLYETFHANP FT GTVTGSAVGCNPDVFWSKLPILLPGSLFAFDYSGYDASLSPVWFRALEMVLRDIGYSEE FT AVSLIEGINHTHHVYRNKTYCVLGGMPSGCSGTSIFNSMINNIIIRTLLIKTFKGIDLD FT ELNMVAYGDDVLASYPFPIDCFELAKAGKEYGLTMTPADKSPCFNEVTWENATFLKRGF FT LPDHQFPFLIHPIMPMKEIHESIRWTKDACNTQDHVRSLCLLAWHNGKDEYEKFVSTIR FT SVPVGKALAIPNFENLRRNWLELF" FT 3'UTR 7301..7356 XX SQ Sequence 7356 BP; 2024 A; 1726 C; 1775 G; 1831 T; 0 other; cgcggggcca ctgaagcgct agcactccga ttctgcggaa tctttgtgcg cctgttttat 60 aaccctcccc cgaaacttgt aacttagaag ttatgtacgt taccgatcag cagcaggcgt 120 ggcacaccag ccatgtcttg atcaagcact tctgtacccc cggactgagt atcaatagac 180 tgctcacgtg gtcgaaggag aaaacgttcg ttatccggct aactacttcg agaagcctag 240 tagcgccact gaaactgcgg agtgtttcgc tcagcacttc ccccgtgtag atcaggtcga 300 tgagtcactg ctcaccccac gggcgaccgt ggcagtggct gcgttggcgg cctgcctatg 360 gggcaaccca taggacgctc taaagtggac atggtgcgaa gagtctattg agctagttag 420 tagtcctccg gcccctgaat gcggctaatc ctaactgcgg agcgcatgcc cccaaaccag 480 agggtggtgc gtcgtaacgg gtaactctgc agcggaaccg actactttgg gtgtccgtgt 540 ttcctttatt cttataatgg ctgcttatgg tgacaattga ggaattgtta ccatatagct 600 attggattgg ccatccggtg tgcaacagag ctattgtcta cttgtttgtt ggatacattc 660 cattaacacc taaatccttc aatacattac actatattct aacgctgaac gcaagaaaat 720 gggagctcaa gtctcgacgc aaaaatccgg cagtcatgag actggtaatg tagccactgg 780 aggatctaca ataaacttca ctaacatcaa ctactataaa gattcttacg ccgcgtcagc 840 cactcggcaa gacttcacac aagatccaaa gaagttcaca caaccagtga tagactctat 900 caaagaacta tcagctcctt tgaattcccc ttctgtggag gcttgcggct atagtgatag 960 ggtcgctcag cttaccgttg ggaactcctc catcactacc caagaggctg ctaatattgt 1020 attggcttat ggagagtggc ctgaatactg ccctgacaca gacgcaactg ccgtggataa 1080 gccaactcgc ccggacgtgt ctgtcaacag gttctacact ttggactcta aaatgtggca 1140 agaaaactcg actggttggt attggaagtt ccctgacgtg ctaaacaaga cgggggtgtt 1200 cggacaaaat gcccagtttc attacttgta ccggtcaggt ttctgcttac atgtacagtg 1260 caacgctagt aaattccacc agggggctct tcttgtggct gtgataccag aatttgtgat 1320 tgctggcaga ggatctaaca caaaaccaaa tgaagcaccc cacccagggt ttactacaac 1380 tttccctggt accaccggtg ctacatttca cgatccatac gttctggatt ccggggtacc 1440 attgagtcaa gctctaatat acccccatca atggatcaat ctccgtacca acaattgtgc 1500 aactgttata gtcccataca tcaatgctgt tccgtttgac tcagctatca atcatagcaa 1560 ctttgggcta atagtgatac cagttagtcc gctgaagtat tcgtccgggg caaccactgc 1620 aatcccaatc actatcacta tagcccccct gaattcggag ttcggaggac tacgacaagc 1680 cgttagccaa ggcatcccag ctgagctcag gcccgggact aatcagttcc tgaccacaga 1740 tgacgatacc gcagcgccca tcctcccagg attcaccccc acacccacaa ttcatatacc 1800 aggggaagta cactctttgc tggagttgtg tagggtggag actattttgg aagtgaacaa 1860 caccacagaa gcaacaggat taacaaggct cttaatacca gtgtcctcgc aaaacaaagc 1920 cgatgagttg tgtgctgcgt ttatggttga tccaggccgg attggacctt ggcaatctac 1980 cttagttgga cagatttgcc gttattacac acaatggtcc gggtctttga aagtgacctt 2040 tatgttcaca ggatccttta tggcaacagg caagatgctg gtggcctact ccccgcccgg 2100 aagcgctcaa ccagctaaca gagaaaccgc catgctgggc acgcacgtca tttgggactt 2160 tggactacaa tcatcggtct ctttggtgat accgtggatc agtaacactc actttcgcac 2220 tgccaagaca ggtggaaatt acgattacta cacggcaggt gtagtgacct tgtggtatca 2280 aaccaattac gtggtcccgc cagaaacccc tggagaggcg tatattatag caatgggggc 2340 agcacaagac aacttcactt tgaagatttg caaggatact gatgaagtga cgcaacaagc 2400 tgtgttgcaa ggtgaccctg tggaagatat aatccatgac gctctgggaa gtacggcgcg 2460 cagggctatt agcagtgcta caaatgttga atccgcagct aacaccaccc ccagttcaca 2520 ccgactggag actggacgcg taccagcgct acaggctgca gaaacgggtg ccacttctaa 2580 tgccacagat gagaacatga ttgagacccg ttgtgtggtt aacagaaatg gggtgctgga 2640 aaccactatt aatcatttct tctcccgctc tggattagtg ggagtagtta acctcacaga 2700 tgggggggcg gacaccactg ggtatgctac atgggatgta gacattatgg gctttgtcca 2760 actccgcaga aagtgcgaga tgttcacata catgagattc aacgcggaat tcacgtttgt 2820 cacaacgatt gacaatggag aggctcgccc gtacatgctg caatacatgt atgtgccccc 2880 tggtgcccct aaaccgacgg gaagggatgc cttccaatgg caaacagcaa ctaacccatc 2940 agtctttgtc aaactcactg acccccctgc acaagtctca gtccctttca tgtcaccagc 3000 tagtgcatat cagtggtttt atgatggtta tcccactttt ggccagcacc cggagacctc 3060 aaacacaacg tacgggttgt gcccaaacaa tatgatgggc acttttgcgg tgagaattgt 3120 tagcaagaag gcaagtcaac taaaactaca gactagagtg tacatgaagc ttaagcatgt 3180 gagggcttgg gtcccaagac cgatcaggtc tcagccatac ttgcttaaaa acttccccaa 3240 ttacgacagt agcaaaatta ccaacagtgc acgggaccga tctagtatca agcaagctaa 3300 tatgggtaaa tttgggcaac aatctggcgc catctacgtt ggtaactaca gagtggtcaa 3360 tagacacttg gccacccaca atgactgggc caacctggtg tgggaagata gttctcgaga 3420 cttgcttgtc tcgtctacca ctgcccaggg ttgtgatacg attgcccgtt gtgagtgtca 3480 gacaggggtg tactattgta actcaaggag gaagcattat ccagtcagct tctcaaaacc 3540 cagcctcgtc ttcatagagg ccagtgagta ttaccctgct agatatcaat ctcacttaat 3600 gcttgctgca ggccactctg aacctggaga ttgcgggggt atcttgaggt gtcaacatgg 3660 tgtagtcggc atagtatcta ctggtggcaa cggtcttgtc ggttttgcaa acgtgaggga 3720 cctcttatgg ttggatgaag aagccatgga acagggagtg tctgactaca ttaagggact 3780 cggcgacgct tttggtactg gtttcactga cgcagtgtct agggaagtgg aggctttgaa 3840 aaattacctg attggttccg agggagcggt ggagaagatc ctgaagaatt tggtgaaact 3900 catatcagct ttggtcatag ttatcagaag cgactatgac atggtcactc ttaccgcaac 3960 tctagctctg attgggtgtc acgggagccc atgggcgtgg attaaagcaa agacggcatc 4020 catcttaggt attcctatgg cacagaagca gagtgcatct tggcttaaga agttcagtga 4080 tatggcgaat gccgcaaagg ggttggagtg gatctctaat aaaatcagta aatttattga 4140 ctggcttaag gaaaagatca ttccagctgc aaaggaaaaa gttgagtttc ttaacaatct 4200 caagcaactg cccttgatgg aaaaccaaat tgctaactta gaacagtctg ctgcttcaca 4260 agaagacctc gaagtcatgt ttggtaatgt gtcataccta gctcactttt gtcgcaagtt 4320 ccagccactc tatgcaactg aagcgaagag agtgtacgcc ttagagaaga gaatgaataa 4380 ttacatgcag ttcaagagca aacaccgtat tgaacctgta tgtttaatta tcaggggctc 4440 accaggaact ggcaagtcac tcgccacagg tataatagca agagccattg ctgacaaata 4500 ccactctagt gtgtactccc tcccgccaga tccagatcac tttgatggat acaagcagca 4560 ggtggtgaca gtcatggatg atttgtgtca aaacccagat ggcaaagaca tgtcattgtt 4620 ttgccaaatg gtatccactg tcgattttat acccccaatg gcttcactgg aagagaaagg 4680 cgtatccttc acatctaaat ttgttattgc ttcaactaac gctagtaaca tcattgtccc 4740 cacggtctca gactctgacg ctattcgaag gagattcttc atggattgtg acatcgaagt 4800 gactgactct tacaagacag acttaggccg cttagatgcg ggtagggccg caaagctctg 4860 ctcagagaat aacaccgcca atttcaagag gtgcagcccg ttagtgtgcg gtaaagccat 4920 ccaactgaga gataggaagt ccaaagtcag gtatagtgta gacactgtgg tatcagagtt 4980 ggttagggag tatagtaata ggtctgctat aggaaatact atagaggctt tattccaagg 5040 gcctcctaaa tttaggccta taagaattag ccttgatgag aaacccgctc cagatgctat 5100 tagcgacctg cttgctagcg ttgacagtga ggaggtgcgg cagtactgca gagatcaagg 5160 atggataata cctgaaacgc caaccaatgt ggagcggcat ctcaataggg cagtgttagt 5220 gatgcaatct atcgctactg tagtcgcagt tgtgtccctt gtttatgtta tttacaagct 5280 atttgctggt ttccaaggcg catattctgg agcgcccaag caagctctca agaaacctgt 5340 gttgagaaca gccactgttc aagggcccag cttagatttt gccctgtctc tcctgcgacg 5400 taacatcagg caggtgcaaa ctgaccaagg gcactttacc atgcttgggg tacgtgaccg 5460 ccttgctatc ttgcctcgtc actcacaacc agggaagact atctgggttg agcacaagtt 5520 ggtcaatgtg cttgatgctg ttgagctagt ggatgaacaa ggtgttaatt tggagcttac 5580 actagtaacc ctagacacca atgagaagtt tagagacgtc accaagttca ttccagagaa 5640 tatcagtgga gccagtgatg ccacattagt aatcaacact gaacacatgc catcaatgtt 5700 tgtcccggta ggggatgtcg ttcaatacgg gttcctaaat cttagtggta agccaaccca 5760 caggaccatg atgtacaatt tccctacaaa ggctggacag tgtggaggcg tggtaacatc 5820 tgtcggtaga atcattggca tccacattgg gggcaatggg cgacaaggct tttgcgctgg 5880 cctgaaaagg agttatttcg caagtgaaca aggtgagatc caatgggtga aacctaacaa 5940 ggagaccggc agattaaata tcaatggtcc aacacgcacc aagttagagc ccagtgtgtt 6000 ccatgatgtg tttgagggca acaaggagcc agcagtccta acaagcaagg accccagatt 6060 agaggttgac tttgagcaag ccctcttctc caagtatgtg ggtaatgtcc tccacgaacc 6120 tgatgaatat gtgaagcagg cagccctcca ctacgcaaat cagctcaagc aactggatat 6180 aaacaccaat aagatgagca tggaggaagc gtgctatggc acagagaacc tggaagcaat 6240 cgatctccac actagcgcag ggtacccata cagtgctctg ggcataaaga agagggacat 6300 actagatcct accactaggg acacaacaaa aatgaagttt tacatggata agtatggttt 6360 ggacttaccg tactccacct atgtcaaaga tgaacttagg tctctggaca agattaagaa 6420 agggaaatcc cgcttaatag aagctagcag cctgaatgac tcagtgtacc ttagaatgac 6480 ttttggccat ctgtatgaaa cattccatgc aaatccaggg actgtgaccg gatcagcggt 6540 tgggtgcaat ccggatgtgt tctggagtaa actcccaatc ctactcccag gctcgctatt 6600 tgcctttgac tattcaggct acgatgccag tcttagcccc gtctggttca gggctttgga 6660 gatggtcttg cgggacattg gttactcaga ggaagcagtg tcactcatag aaggaataaa 6720 tcatactcat catgtgtacc ggaacaaaac atattgtgtc cttggcggga tgccgtcagg 6780 atgttctggc acctccattt tcaactcgat gatcaacaac atcatcatca ggacgctttt 6840 gattaaaaca tttaaaggga tagatttaga cgagttgaat atggtggcct atggggatga 6900 tgtgctagct agttatcctt tccccattga ttgctttgag ctagctaaag ctggcaaaga 6960 atatgggctg actatgacac ctgcagacaa gtcaccttgc tttaacgaag tgacgtggga 7020 aaacgccacc tttctgaaga gagggtttct accagaccat caattcccat tcttgattca 7080 tcccataatg cccatgaaag agatccacga atccatacgc tggaccaagg atgcgtgcaa 7140 cacccaagac catgtacgct ccctgtgttt actagcttgg cataacggta aggatgaata 7200 tgaaaaattt gtgagtacaa ttagatcagt cccagttggg aaagcattgg ctattccgaa 7260 ctttgaaaat ctgagaagaa attggctcga actattttaa atttacagtt ggaagctgaa 7320 ccccaccaga aatctggtcg tttaagactt ttctct 7356 // ID MK421103; SV 1; linear; genomic RNA; STD; VRL; 2217 BP. XX AC MK421103; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Cucumber mosaic virus strain ZJAm segment RNA3, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-2217 RA Su X., Hou P., Fei L.B., Song J.W.; RT ; RL Submitted (21-JAN-2019) to the INSDC. RL Zhejiang Agriculture and Forestry University, National Joint Local RL Engineering Laboratory of Biopesticide high-efficient Preparation, 666 Wu RL Su Road, Hangzhou, Zhejiang 311300, China XX DR MD5; dff3c61e9a4091f1278182e9304339f2. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2217 FT /organism="Cucumber mosaic virus" FT /segment="RNA3" FT /host="Atractylodes macrocephala" FT /strain="ZJAm" FT /serotype="IB" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="leaf" FT /collection_date="26-May-2017" FT /db_xref="taxon:12305" FT CDS 123..962 FT /codon_start=1 FT /product="3a" FT /protein_id="QEG59328.1" FT /translation="MAFQGTSRTLTQQSSAATSDELQKILFSPDAIKKMAAECDLGRHH FT WMRADNAISVRPLVPEVTHGRIASFFKSGYDAGELCSKGYMSVPQVLCAVTRTVSTDAE FT GSLRIYLADLGDKELSPIDKQCVTLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE FT RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK FT SQLNNIESSQYVLTDSKINQNARSESEELNVESPPAAIGSSSASRFESFRPQVVNGL" FT CDS 1258..1914 FT /codon_start=1 FT /product="coat protein" FT /protein_id="QEG59329.1" FT /translation="MDKSESTSAGRNRRRRPRRGSRSASSSADANFRVLSQQLSRLNKT FT LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLTLPDSVTEFDKKLV FT SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN FT NKLLHDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV" XX SQ Sequence 2217 BP; 504 A; 530 C; 541 G; 642 T; 0 other; gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtgtcg cgtcgtgtcg agtcgtgttg 60 tccgcacatt tgagtcgtgc tgtccgcacc ttttcttttc agtgtgttag aatacccgag 120 gcatggcttt ccaaggtacc agcaggactt taacccaaca gtcctcagcg gcgacgtctg 180 acgaacttca aaagatatta tttagccctg atgccattaa gaaaatggct gctgagtgtg 240 acctaggccg gcatcattgg atgcgcgctg ataatgcaat ttcagtccgg cccctcgttc 300 ccgaagtaac ccacggtcgt attgcttcct tctttaagtc tggatatgat gctggtgaat 360 tatgttctaa aggatacatg agcgtccctc aagtgttgtg tgctgttact cgaacagttt 420 ccaccgatgc tgaagggtcc ttgagaattt acctagctga tttaggcgat aaggagctat 480 ctcccataga taagcagtgc gtcacattac ataaccatga tctccccgct ttagtgtctt 540 tccaaccgac gtatgattgt cctatggaga cagttgggaa tcggaagcgg tgttttgctg 600 ttgttatcga aagacatggt tatattgggt ataccggcac cacagctagc gtgtgtagta 660 attggcaagc acggttttct tctaagaata acaactacac tcatatcgca gctgggaaga 720 ctctagtact gccattcaac agattagctg agcaaacgaa accgtcagcc gtcgctcgcc 780 tgttgaagtc gcaactgaat aacatagaat cttcgcaata cgtcttgacg gattcgaaga 840 ttaatcagaa tgcgcgcagt gagtccgagg aattaaatgt tgagagccct cccgccgcaa 900 tcgggagttc ttccgcgtcc cgcttcgaat ccttcagacc gcaggtggtt aacggtcttt 960 agcgctttcg ttgtgtatta gtatataagt atatgtgagt ctgtacataa tactatatct 1020 atagtgtcct gtgtgggttg atacagtaga caactgtgac gcgatgtcgt gttgagaagg 1080 gaacacatct ggttcttgta agccacatca ttagttttga ggttcaattc ctcttgctcc 1140 ctgttgtgtc ccttactttt tcatggatgc ttctccacga aattgcgttt cgtctactgg 1200 atcttagaga gtttgtgttg tgttttctct ttgtgtcgta gatatttgag tcgagtcatg 1260 gacaaatctg aatcaaccag tgctggtcgt aaccgtcgac gtcgtccgcg tcgtggttcc 1320 cgctccgctt cctcctccgc ggatgccaac tttagagtct tgtcgcagca actttcgcga 1380 cttaacaaga cgttggcagc tggtcgtcct accattaacc acccaacctt tgtggggagt 1440 gaacgttgta aacctgggta cacgttcaca tctattaccc tgaagccacc gaaaatagac 1500 cgcgggtctt attatggtaa aaggttgaca ttacctgatt cagtcacgga attcgataag 1560 aagcttgttt cgcgcattca aattcgagtt aatcctttgc cgaaatttga ttctaccgtg 1620 tgggtgacag tccgtaaagt tcctgcctcc tcggacttgt ccgtcgccgc catctctgct 1680 atgtttgcgg acggagcctc accggtactg gtttatcagt atgctgcatc cggagtccaa 1740 gctaacaata aattgttgca tgatctttcg gcgatgcgcg ctgatattgg cgacatgcga 1800 aagtacgccg tactcgtgta ttcaaaagac gatgcactcg agacggatga gctggtactt 1860 catgtcgaca ttgagcacca acgcattccc acatctgggg tgctcccagt ttgaatccgt 1920 gtttcccaga atcctccctc cagtctgagg cgggagatga gttggcagta ttgctacaaa 1980 ctgtctgaag tcgctaaacg ctttgcggcg aacgggttgt ccatccagct aacggctaaa 2040 atggtcagtc gtagagaaat ctacgccagt ggtctacaga ccgctgaggt gcctgtgaaa 2100 ccatctccta ggtttcttcg gaaggacttc ggtccgtgta cttctagcac aaggtgctag 2160 tctcagggta cgggtacccc cccattttat ggggggcatt cgtattttcc agctcca 2217 // ID MK421104; SV 1; linear; genomic RNA; STD; VRL; 3053 BP. XX AC MK421104; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Cucumber mosaic virus strain ZJAm segment RNA2, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3053 RA Su X., Song J.W., Fei L.B., Hou P.P.; RT ; RL Submitted (21-JAN-2019) to the INSDC. RL Zhejiang Agriculture and Forestry University, National Joint Local RL Engineering Laboratory of Biopesticide high-efficient Preparation, 666 Wu RL Su Road, Hangzhou, Zhejiang 311300, China XX DR MD5; 664f8be3baf02f0fe3611788df89d849. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3053 FT /organism="Cucumber mosaic virus" FT /segment="RNA2" FT /host="Atractylodes macrocephala" FT /strain="ZJAm" FT /serotype="IB" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="leaf" FT /collection_date="26-May-2017" FT /db_xref="taxon:12305" FT CDS 79..2655 FT /codon_start=1 FT /product="2a" FT /protein_id="QEG59330.1" FT /translation="MAFPAPAFSLANLLNGSYGVDTPEEVERVRSEQREEAAAACRNYR FT PLPAVDVSESVPEDAHSLRTPDGAPSEEVSVEFVTYGAEDYLEKSDDELLVAFETMVKP FT MRIGQLWCPAFNKCSFISSIAMARALLLAPRTSHRTMKCFEDLVAAIYTKSDFYYDDEC FT EADDVQIDISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTVANPPSLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLASSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNVDRPVP FT ATITYHKKGITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVKNKHCLEID FT LSKFDKSQGEFHLMIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSVLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMTQSCIDQLSLFFELKYRKSGAEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFSCVELRIERSSSTKQRKKKDGIERRRNDKRRTPTGSYGGGEEAETKVSQAEST FT GTRSQKSQREGAFKSQAVPLPTILPSRWFGTDRDVPPCEHGGIVRV" FT CDS 2414..2749 FT /codon_start=1 FT /product="2b" FT /protein_id="QEG59331.1" FT /translation="MELNEGAMTNVELQLARMVEAKRQRRRSHKQNRRERGHKSPSERA FT RSNLRLFRFLPFYQVDGSELIEMYHHVNMVGLSESEAPCFTLPAEEDHDFDDTDWFAGN FT EWAEGSF" XX SQ Sequence 3053 BP; 749 A; 695 C; 727 G; 882 T; 0 other; gtttatttac aagagcgtac ggttcaatcc ctgcctcccc tgtaaaactc cctagacttt 60 ctagtttctt tctttcttat ggctttcccc gcccccgctt tctcactagc caatcttttg 120 aacggcagtt acggtgtcga cactcccgag gaagtggaac gcgtgcgatc tgagcaacgc 180 gaagaggctg ctgcggcctg tcgtaattac aggcccttac ccgctgtgga tgtcagcgag 240 agtgtcccag aggatgcgca ttccctccga actccagacg gagctccctc cgaagaggtg 300 tctgtagagt ttgttactta tggtgctgaa gattaccttg aaaaatctga tgatgagctc 360 cttgtcgctt ttgagacgat ggtcaaaccc atgcgtatcg gacaactgtg gtgccctgcg 420 tttaataaat gttcttttat ttccagcatt gccatggcca gggctttgct attagcaccc 480 agaacatccc accgaaccat gaagtgtttt gaggacctgg tcgcggctat ttacactaaa 540 tccgatttct actacgatga tgagtgtgaa gccgacgacg ttcagataga tatctcgtct 600 cgcgatgtac ccggttattc tttcgaaccg tggtcccgaa cgtctggatt tgaaccaccg 660 cctatctgtg aggcgtgtga catgatcatg taccagtgcc cgtgttttga tttcaatgct 720 ttaaagaaat cgtgcgctga gaggacattc gctgatgatt atgttatcga aggtttagat 780 ggtgttgtag acaatgcgac tctgttgtcg aatttaggcc cgtttttggt gcctgtgaaa 840 tgtcagtatg agaaatgtcc aacacccacc gttgcgaatc ctccgagtct taatcgtgct 900 actgatcgtg ttgatatcaa tttagttcaa tccatttgtg actcgactct gcccactcat 960 agtaactacg acgactcttt tcatcaagtg ttcgtcgaga gtgctgacta ttctattgat 1020 ctggatcatg ttagacttcg ccagtctgat cttattgcaa aaatcccaga ttcagggcat 1080 atgataccgg ttttgaacac cgggagcggt cacaagagag taggtacgac gaaggaggtc 1140 cttacagcta tcaagaaacg taatgctgac gttccagagc taggtgattc cgttaatctg 1200 tccagattga gtaaggctgt ggctgagaga ttcttcattt catacattaa tggtaactct 1260 ctagcatcca gcaactttgt taatgtcgtt agcaacttcc acgattacat ggaaaaatgg 1320 aagtcctcag gtctttcgta tgatgatctt ccggatcttc atgctgaaaa tttgcagttt 1380 tatgatcaca tgataaaatc tgatgtgaaa cctgtagtga gcgacacact caacgttgac 1440 agaccggttc cggctactat aacgtatcat aagaaaggta taacctccca gttctcaccg 1500 ttgtttactg cgctatttga gcgtttccag agatgccttc gagaacgcat tattcttcct 1560 gttggaaaga tttcatccct tgagatggca ggatttgatg ttaagaacaa gcactgtctc 1620 gagattgatt tgtccaaatt cgacaagtct caaggtgaat tccatctaat gattcaggaa 1680 cacattttga atggtctagg gtgcccagct cctataacta agtggtggtg tgatttccac 1740 agattctctt atattagaga ccgtagagct ggcgttggta tgcccatcag ttttcagaga 1800 cgaactggtg atgcattcac ctacttcggt aacaccattg tcaccatggc tgaatttgca 1860 tggtgttacg acaccgacca attcgaaaag cttttattct caggcgatga ttctctagga 1920 ttttcagtac ttcctcctgt tggtgatccg agtaagttca cgactctctt caacatggaa 1980 gctaaggtga tggagcccgc agtaccatat atttgttcga agttcttact ctctgacgag 2040 ttcggtaaca ctttttccgt tccagatcca ttgcgcgagg ttcagcggtt aggcacgaag 2100 aaaatcccct attcagacaa tgatgaattc ctgtttgctc acttcatgag ctttgttgat 2160 cgattgaagt ttttggaccg aatgactcag tcttgtatcg atcagctttc tctcttcttc 2220 gagttgaaat acaggaagtc tggggccgag gctgctttaa tgttaggcgc ctttaagaaa 2280 tataccgcta atttccagtc ctataaagaa ctctactatt cagatcgtcg tcagtgcgaa 2340 ttgatcaatt cgtttagttg tgtagagtta aggattgagc gttcgagttc cactaagcag 2400 cgaaagaaga aagatggaat tgaacgaagg cgcaatgaca aacgtcgaac tccaactggc 2460 tcgtatggtg gaggcgaaga ggcagagacg aaggtctcac aagcagaatc gacgggaacg 2520 aggtcacaaa agtcccagcg agagggcgcg ttcaaatctc aggctgttcc gcttcctacc 2580 attctaccaa gtagatggtt cggaactgat agagatgtac caccatgtga acatggtggg 2640 attgtccgag tctgaggccc cttgttttac gttgccagcg gaagaagacc atgatttcga 2700 cgatacggat tggttcgctg gtaacgagtg ggcggaaggg tcgttctgaa cctccccttc 2760 ctaatctccc tccggttttc tgaggcggga gctgagttgg cagtattgct acaaactgtc 2820 tgaagtcgct aaacgttttt acggcgaacg ggttgtccat ccagctaacg gctaaaatgg 2880 tcagtcgtag agaaatctac gccagtggtc tacagaccgc tgaggtgcct gtgaaaccat 2940 ctcctaggtt tcttcggaag gacttcggtc cgtgtacttc tagcacaagg tgctagtctc 3000 agggtacggg taccccccca ttttatgggg ggcattcgta ttttccagct cca 3053 // ID MK421105; SV 1; linear; genomic RNA; STD; VRL; 3363 BP. XX AC MK421105; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Cucumber mosaic virus strain ZJAm segment RNA1, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3363 RA Su X., Song J.W., Hou P.P., Fei L.B.; RT ; RL Submitted (21-JAN-2019) to the INSDC. RL Zhejiang Agriculture and Forestry University, National Joint Local RL Engineering Laboratory of Biopesticide high-efficient Preparation, 666 Wu RL Su Road, Hangzhou, Zhejiang 311300, China XX DR MD5; 936a1b127a4356f965e0524514135af9. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3363 FT /organism="Cucumber mosaic virus" FT /segment="RNA1" FT /host="Atractylodes macrocephala" FT /strain="ZJAm" FT /serotype="IB" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="leaf" FT /collection_date="26-May-2017" FT /db_xref="taxon:12305" FT CDS 96..3077 FT /codon_start=1 FT /product="1a" FT /protein_id="QEG59332.1" FT /translation="MATSSFNINELVASHGDKGLLANALVDKTAHEQLEEQLQHQRRGR FT KVYIRNVLSVKDSEVIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL FT RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLMNMRKIILNDPQQFDGRQ FT PDFCTQPAADCKVQAHFAISIHGGYDMGFRGLCEAMNAHGTTILKGTMMFDGAMMFDDQ FT GVIPELNCQWRKIRSAFSETEDVTPLSGKLNSTVFSRVRKFKTMVAFDFINESTMSYVH FT DWENIKSFLTDQTYSYRGMTYGIERCVIHAGIMTYKIIGVPGMCPPELIRHCIWFPSIK FT DYIGLKIPASQDLVEWKTVRILMSTLRETEEIAMRCYNDKKAWMEQFKVILGVLSAKSS FT TIVINGMSMQSGERIDINDYHYIGFAILLHTKMKYEQLGKMYDMWNASSISKWFAALTR FT PLRVFFSGVVHALFPTLRPREEKEFLIKLSTFVTFNEECSFDGGEEWDVISSAAYVATQ FT AVTDGKILAAQKAEKLAEKLAQPVIEVSDRPEASSPTPDDTADVCGKEQEVSELDSLSA FT QTRSPITRIAERATAMLEYAAYEKQLHDTTVSNLKRIWNMAGGDDKRNSLEGNLKFVFD FT TYFTVDPMVNIHFSTGRWMRPVPEGIVYSVGYNERGLGPKSDGELYIVNSECVICNSES FT LSAVTRSLQAPTGTISQVDGVAGCGKTTAIKSIFEPSTDMIVTANKKSAHDVRMALFKS FT SDSKEACTFVRTADSVLLNECPTVSRVLVDEVVLLHFGQLCAVMSKLKAVRAICFGDSE FT QIAFSSRDASFDMRFSKIIPDETSDADTTFRSPQDVVPLVRLMATKALPKGTHSKYTKW FT VSQSKVKRSVTSRAIASVTLVDLDSSRFYITMTQADKASLISRAKEMNLPKTFWDERIK FT TVHESQGISEDHVTLVRLKSTKCDLFKKFSYCLVALTRHKVTFRYEYCGVLNGDLIAEC FT IARV" XX SQ Sequence 3363 BP; 838 A; 733 C; 825 G; 964 T; 3 other; gtttatttac aagagcgtac ggttcaatcc ctgcctcccc tgtaaaacta ccctttgaaa 60 acctctcttt tctaatcttt tctttgtaaa ttcctatggc gacgtcctcg ttcaacatca 120 atgaattggt agcctcccac ggcgataaag gactactcgc gaacgccctc gttgataaga 180 cagctcatga gcagctcgag gagcaattac agcatcaacg tagaggccgt aaggtctaca 240 ttcggaaygt tctgagtgta aaggattcyg aggtcatccg gaatcggtat ggaggaaagt 300 acgacctcca tcttacccag caggagtttg ctccccacgg cctagctggt gccctccgct 360 tgtgtgaaac tctcgattgt ctagactctt tcccttcatc aggtctgcgg cargacctcg 420 tcttagactt cggaggaagt tgggtcacac attacctccg cggacataac gtacactgct 480 gttcgccctg tttgggtatc cgcgataaaa tgcgccacgc ggaacgttta atgaacatgc 540 gcaagatcat cttgaacgat ccacaacagt tcgatggtcg acagccggat ttctgcactc 600 aaccggctgc ggattgcaaa gtacaagccc actttgctat atctattcat ggaggttatg 660 atatgggctt tagaggacta tgtgaggcaa tgaatgctca cggaaccacc attttgaagg 720 gaacgatgat gttcgatggt gcgatgatgt ttgacgacca gggtgtaata cctgaactta 780 attgccagtg gaggaagatt aggagtgctt tctctgagac tgaagacgtc acaccgttgt 840 ctggtaaact taattccaca gtattctctc gcgtgcgtaa attcaagact atggtggctt 900 ttgacttcat taatgagtcc accatgtctt atgttcatga ttgggagaat ataaagtctt 960 ttctgacaga ccagacctac tcgtaccgag ggatgactta tggtattgag cgctgcgtta 1020 ttcacgccgg tattatgacg tataagatca ttggtgtacc tgggatgtgc ccacccgaac 1080 tcattcgaca ttgtatttgg ttcccctcta ttaaagacta tattggtctg aagattcccg 1140 cgtcgcagga cttggttgag tggaaaacag tgcgtatttt aatgtcaaca ttacgtgaaa 1200 cggaagagat tgctatgagg tgttacaacg ataagaaagc gtggatggaa caatttaagg 1260 ttatcctagg tgttttatct gcgaaatcat ctaccattgt tattaatggt atgtccatgc 1320 aatctggcga acgcatagat atcaatgatt accattatat tggttttgct attcttctgc 1380 acacaaaaat gaagtatgaa cagctgggaa aaatgtatga tatgtggaat gcttcgagca 1440 tctcgaagtg gtttgcagcg ttgactcgtc cgttgcgtgt gtttttctcc ggcgttgttc 1500 acgcactgtt cccgactttg agaccccgcg aggaaaaaga attcctgatt aagctctcca 1560 ccttcgttac ttttaacgaa gagtgctcgt ttgatggtgg agaggaatgg gacgtgatat 1620 catctgctgc atacgttgct acgcaggctg ttaccgatgg gaagattttg gctgcgcaga 1680 aagccgagaa gctcgctgag aagcttgcac aacccgtgat tgaggtatcg gacagacctg 1740 aggcgtcatc tccaacgcct gatgatacag ctgatgtttg tggaaaagag caagaggttt 1800 cggaacttga ctctttatca gctcagacac gttcccccat cactagaatc gctgaaaggg 1860 ctactgctat gttagagtat gccgcttatg agaaacagct acacgacacc acagtgtcta 1920 atttgaaacg tatttggaac atggcgggcg gtgatgacaa gagaaattcc ctcgagggta 1980 atttgaagtt tgttttcgat acgtatttca ctgtcgatcc tatggtgaat attcatttct 2040 ccacgggtcg gtggatgcgt cctgtgcccg aaggaattgt ctactctgtt ggttataatg 2100 aacgcggttt aggtccgaag tcggatggag agctttacat tgtcaacagt gagtgtgtga 2160 tttgcaacag tgagtctctg tctgctgtca ctcgctcgct tcaagcccca actggaacca 2220 ttagtcaagt cgacggggtt gccggttgcg ggaagactac ggcaataaaa tccatttttg 2280 agccatccac tgacatgatc gtcaccgcta acaagaaatc tgcccatgat gttcgtatgg 2340 cattgtttaa atcgtcggat tccaaagaag cttgcacctt tgttcgtact gccgattctg 2400 tcctacttaa tgaatgtccg actgttagta gggttctggt tgatgaggtt gtgctgcttc 2460 actttggtca attgtgtgcc gtgatgtcca agctgaaggc tgtgcgggct atatgttttg 2520 gggattcgga gcaaattgct ttttcttccc gcgacgcctc atttgatatg cgtttctcta 2580 agattattcc tgatgaaact agtgatgcgg atactacatt ccgtagccca caagacgttg 2640 tgccgcttgt gcgtttaatg gctacgaagg ctcttccgaa aggaactcat tcgaagtaca 2700 cgaagtgggt ttctcaatct aaagtgaaaa gatctgttac atctcgtgcc atcgctagtg 2760 tgacattggt tgacctggat tcatccaggt tttatattac gatgacccaa gctgataagg 2820 cctcactgat ttcaagagcg aaagagatga atctaccaaa gactttctgg gatgaaagga 2880 ttaaaactgt gcatgagtct caaggcattt ctgaagatca tgttactttg gtaagattaa 2940 agagcacaaa gtgtgacctg tttaagaaat tttcatactg tcttgttgcc ttgacgagac 3000 acaaggtcac attccgctac gagtattgcg gtgtattgaa cggcgattta atcgccgaat 3060 gtattgctcg tgtctagcgg actccctcct ttgaggcggg agctgagttg gcagtattgc 3120 tacaaactgt ctgaagtcac taaacgcttt gcggcgaacg ggttgtccat ccagctaacg 3180 gctaaaatgg tcagtcgtag agaaatctac gccagtggtc tacagaccgc tgaggtgcct 3240 gtgaaaccat ctcctaggtt tcttcggaag gacttcggtc cgtgtacttc tagcacaagg 3300 tgctagtctc agggtacggg taccccccca ttttatgggg ggcattcgta ttttccagct 3360 cca 3363 // ID MK430077; SV 2; linear; genomic DNA; STD; VRL; 1320 BP. XX AC MK430077; XX DT 29-APR-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 2) XX DE Fusarium graminearum gemytripvirus 1 segment DNA-B coat protein gene, DE complete cds. XX KW . XX OS Fusarium graminearum gemytripvirus 1 OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Genomoviridae; unclassified Genomoviridae. XX RN [1] RC Publication Status: Online-Only RP 1-1320 RX PUBMED; 32284975. RA Li P., Wang S., Zhang L., Qiu D., Zhou X., Guo L.; RT "A tripartite ssDNA mycovirus from a plant pathogenic fungus is infectious RT as cloned DNA and purified virions"; RL Sci Adv 6(14):0-eaay9634(2020). XX RN [2] RP 1-1320 RA Li P., Wang S., Zhang L., Qiu D., Zhou X., Guo L.; RT ; RL Submitted (22-JAN-2019) to the INSDC. RL State Key Laboratory for Biology of Plant Diseases and Insect Pests, RL Institution of Plant Protection, Chinese Academy of Agricultural Sciences, RL No. 12 Zhongguancun South Street, Beijing, Beijing 100081, China XX DR MD5; c2f5fe341229ac435671d612cad76a30. XX CC On Apr 29, 2020 this sequence version replaced MK430077.1. CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1320 FT /organism="Fusarium graminearum gemytripvirus 1" FT /segment="DNA-B" FT /host="Fusarium graminearum" FT /isolate="HB58" FT /mol_type="genomic DNA" FT /country="China" FT /isolation_source="the diseased glumes of wheat infected FT with Fusarium spp." FT /collection_date="Oct-2010" FT /db_xref="taxon:2708635" FT CDS 142..1044 FT /codon_start=1 FT /product="coat protein" FT /note="CP" FT /protein_id="QIA59411.1" FT /translation="MASTKKKSYNNKKAYKKKEWKSKKTWDKSSYYDNYQSKMNISNMQ FT TKRDNMMCVTSHCGVPNAALLENSVVGEIPANMGVHYIMWSPTYREAVPPNRAAQLDRQ FT SANTFFTGWKDNLSYQFKGQITGIHLRVVISTRREVESAQPFIGPGNTLCRNLAVRDMS FT DETLDQFLSGTRDVDWTLVNVMDTMFDPAVCKVLFRQRKILGAADALLKTEEFYHRIRR FT PMVYGDRQDGLEFVSSGWAGRESENIYVIDMYSLISAAPPLGNLLDGEGNIVLDDKKRP FT IPVYAKLNISGNSIVYWRE" XX SQ Sequence 1320 BP; 366 A; 206 C; 373 G; 375 T; 0 other; ttcttctctt tcttagattt gtgaccgtga cccaggtttg attttgggta tataagggag 60 gggtagccac catttttgct agtctgtttt tggacttaaa aaatttattt tttaacacaa 120 aacattatta cgtcgacaaa aatggcttct acaaagaaga aatcatacaa caacaagaag 180 gcttataaaa aaaaagaatg gaagtcgaag aagacttggg acaagtctag ttattacgac 240 aattaccagt cgaagatgaa tatttcgaat atgcagacga agagggacaa catgatgtgt 300 gtgacgtcac attgtggtgt tccgaatgcg gcgttactgg agaattctgt tgtgggtgaa 360 attccagcca atatgggagt tcattatatt atgtggtctc ctacgtatcg agaggcggta 420 ccaccgaatc gagcggcaca gttggatcgg caatccgcaa acacattttt tactggttgg 480 aaggataatt tgtcctatca atttaaggga cagattacag ggattcacct gagggttgtg 540 atatctaccc gaagagaagt ggagtccgcg cagcctttta ttgggccggg gaatacgctg 600 tgcagaaact tggcggttcg tgatatgtcg gatgagacat tggaccagtt tttgtcgggt 660 acccgggatg ttgattggac gttggtgaat gtgatggaca cgatgtttga tccggcggtg 720 tgcaaggtgt tgtttcggca gaggaagatt ttaggtgcag ctgatgcgtt gttgaagacg 780 gaggagtttt atcaccgtat ccgtcggcct atggtgtacg gcgataggca ggatggtttg 840 gagtttgtgt ctagtggttg ggctggaagg gagtcggaga acatatacgt cattgatatg 900 tactctttga tttcggcagc cccaccgtta ggtaatttgt tggatggaga gggaaatatt 960 gttttggatg acaagaaacg gcctattccc gtatatgcga agttaaatat tagtggaaat 1020 agtatagtgt attggaggga gtagggtaat tttagtgtag caaaattgag ttggtgatag 1080 cttcattttt ttggatccac tttgtgacaa ttgagttgaa gtaagggtca ttgcaccatc 1140 atgggggagg gacctccggg ggggccccat gtggggctgt acccgcgtca gaagcccaag 1200 ctccggaata aaaaaaaatc aaaagtagac tgtcggttaa agttcggttg ggtaggatta 1260 gtcagcaaat tttcaaccaa tagcggaggt caagaaatct aagaaagaga ggatttaaga 1320 // ID MK529729; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529729; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate 1809261 polyprotein, envelope protein E region, DE (POLY) gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; 7914cfd4c32f4de6bb0e192a055fe727. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="1809261" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Sep-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33571.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNSAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 489 A; 291 C; 386 G; 319 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaactctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagcc 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggca 1485 // ID MK529730; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529730; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate 1809283 polyprotein, envelope protein E region, DE (POLY) gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; 07c123d8fd5954683899c3cb19eefbc0. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="1809283" FT /mol_type="genomic RNA" FT /country="Cambodia" FT /isolation_source="serum" FT /collection_date="Sep-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33572.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTDPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALTLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 295 C; 384 G; 318 T; 0 other; atgcgatgcg tgggaatagg cagcagagac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttagaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acagaccctg ccgtcctgcg caaactgtgt 180 attgaagcta aaatatcaaa caccaccact gactcaagat gtccaacaca aggagaagcc 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcggaaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaaata ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagagatac agctgaccga ctacggagct 540 cttacattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtactag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca cggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agttactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catcgtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggttcaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttttgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529731; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529731; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH1 polyprotein, envelope protein E region, (POLY) DE gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; de9bfdc455564010973a75203f17379f. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH1" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Jul-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33573.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 292 C; 387 G; 318 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagcc 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529732; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529732; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH2 polyprotein, envelope protein E region, (POLY) DE gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; de9bfdc455564010973a75203f17379f. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH2" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Aug-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33574.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 292 C; 387 G; 318 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagcc 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529733; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529733; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH3 polyprotein, envelope protein E region, (POLY) DE gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; de9bfdc455564010973a75203f17379f. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH3" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Aug-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33575.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 292 C; 387 G; 318 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagcc 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529734; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529734; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH4 polyprotein, envelope protein E region, (POLY) DE gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; de9bfdc455564010973a75203f17379f. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH4" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Aug-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33576.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 292 C; 387 G; 318 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagcc 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529735; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529735; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH6 polyprotein, envelope protein E region, (POLY) DE gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; de9bfdc455564010973a75203f17379f. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH6" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Aug-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33577.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 292 C; 387 G; 318 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagcc 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529736; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529736; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH7 polyprotein, envelope protein E region, (POLY) DE gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; de9bfdc455564010973a75203f17379f. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH7" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Aug-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33578.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 292 C; 387 G; 318 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagcc 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529737; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529737; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH11 polyprotein, envelope protein E region, (POLY) DE gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; de9bfdc455564010973a75203f17379f. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH11" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Aug-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33579.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 292 C; 387 G; 318 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagcc 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529738; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529738; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH13 polyprotein, envelope protein E region, (POLY) DE gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; 07bebe55859be6e1ad2f820d3fc0dc58. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH13" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Aug-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33580.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 291 C; 387 G; 319 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagcc 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcactgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529739; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529739; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH17 polyprotein, envelope protein E region, (POLY) DE gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; 3eb657b904348df7c42f51f6bd428d4a. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH17" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Oct-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33581.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 291 C; 387 G; 319 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagct 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529740; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529740; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH19 polyprotein, envelope protein E region, (POLY) DE gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; 00c6367e83bb3a9c0f49cf95e4c46fb0. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH19" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Sep-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33582.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 293 C; 387 G; 317 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagcc 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgcgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529741; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529741; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH24 polyprotein, envelope protein E region, (POLY) DE gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; de9bfdc455564010973a75203f17379f. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH24" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Sep-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33583.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 292 C; 387 G; 318 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagcc 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529742; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529742; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH25 polyprotein, envelope protein E region, (POLY) DE gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; de9bfdc455564010973a75203f17379f. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH25" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Sep-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33584.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 292 C; 387 G; 318 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagcc 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529743; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529743; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH30 polyprotein, envelope protein E region, (POLY) DE gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; 10ef1a18258d1efdb89b003bcfea3086. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH30" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Sep-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33585.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLLTCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALTLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGVGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 489 A; 300 C; 383 G; 313 T; 0 other; atgcgatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tactggaaca tggaagttgc gtcaccacca tggcaaaaga caaaccaaca 120 ctggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctacg caaactgtgc 180 attgaagcta agatatcaaa caccaccact gactcaagat gtccaacaca aggagaagcc 240 acactggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcggaaaa ggaagcctac taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaagatagtt caatatgaaa acttgaaata ttcagtaata 420 gtcaccgtcc acactggaga ccagcatcag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacta taacacctca agctcccacg acggaaatac agctgaccga ctacggagct 540 cttacattgg attgttcacc tagaacagga ttagacttta atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacttacc actgccctgg 660 acctcgggag cttcaacatc acaagagact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtactag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacagaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgtagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catcgtgata 1140 ggagtaggtg aaaaagcttt gaaactaagc tggttcaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaaccgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggttagg attaaactca aggagcacgt ccctctcgat gacgtgcatt 1440 gcagttggcc tagtaacact atacctagga gtcatggttc aggcg 1485 // ID MK529744; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529744; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate M1 polyprotein, envelope protein E region, (POLY) DE gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; de9bfdc455564010973a75203f17379f. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="mosquito" FT /isolate="M1" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="Sep-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33586.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 292 C; 387 G; 318 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagcc 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529745; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529745; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH18102202 polyprotein, envelope protein E region, DE (POLY) gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; 60de0b51e9f38d583f4cd0611fbae68e. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH18102202" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Oct-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33587.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRAGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 487 A; 293 C; 388 G; 317 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcca aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagcc 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagagcagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529746; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529746; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH18102204 polyprotein, envelope protein E region, DE (POLY) gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; de9bfdc455564010973a75203f17379f. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH18102204" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Oct-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33588.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 292 C; 387 G; 318 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagcc 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529747; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529747; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH18102504 polyprotein, envelope protein E region, DE (POLY) gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; de9bfdc455564010973a75203f17379f. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH18102504" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Oct-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33589.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 292 C; 387 G; 318 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagcc 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529748; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529748; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH18102704 polyprotein, envelope protein E region, DE (POLY) gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; 49fa347c0f51d94ac1d9ea140fc022a7. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH18102704" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Oct-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33590.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLLTCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALTLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGVGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 489 A; 299 C; 383 G; 314 T; 0 other; atgcgatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tactggaaca tggaagttgc gtcaccacca tggcaaaaga caaaccaaca 120 ctggacattg aactcttgaa gacggaagtt acaaaccctg ccgtcctacg caaactgtgc 180 attgaagcta agatatcaaa caccaccact gactcaagat gtccaacaca aggagaagcc 240 acactggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcggaaaa ggaagcctac taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaagatagtt caatatgaaa acttgaaata ttcagtaata 420 gtcaccgtcc acactggaga ccagcatcag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacta taacacctca agctcccacg acggaaatac agctgaccga ctacggagct 540 cttacattgg attgttcacc tagaacagga ttagacttta atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacttacc actgccctgg 660 acctcgggag cttcaacatc acaagagact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtactag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacagaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgtagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catcgtgata 1140 ggagtaggtg aaaaagcttt gaaactaagc tggttcaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaaccgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggttagg attaaactca aggagcacgt ccctctcgat gacgtgcatt 1440 gcagttggcc tagtaacact atacctagga gtcatggttc aggcg 1485 // ID MK529749; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529749; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH18102802 polyprotein, envelope protein E region, DE (POLY) gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; 3eb657b904348df7c42f51f6bd428d4a. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH18102802" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Oct-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33591.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 291 C; 387 G; 319 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagct 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529750; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529750; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH18110202 polyprotein, envelope protein E region, DE (POLY) gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; 3eb657b904348df7c42f51f6bd428d4a. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH18110202" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Oct-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33592.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 291 C; 387 G; 319 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagct 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529751; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529751; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH18110502 polyprotein, envelope protein E region, DE (POLY) gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; de9bfdc455564010973a75203f17379f. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH18110502" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Nov-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33593.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 292 C; 387 G; 318 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagcc 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529752; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529752; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH18110801 polyprotein, envelope protein E region, DE (POLY) gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; 49fa347c0f51d94ac1d9ea140fc022a7. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH18110801" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Nov-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33594.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLLTCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALTLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGVGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 489 A; 299 C; 383 G; 314 T; 0 other; atgcgatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tactggaaca tggaagttgc gtcaccacca tggcaaaaga caaaccaaca 120 ctggacattg aactcttgaa gacggaagtt acaaaccctg ccgtcctacg caaactgtgc 180 attgaagcta agatatcaaa caccaccact gactcaagat gtccaacaca aggagaagcc 240 acactggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcggaaaa ggaagcctac taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaagatagtt caatatgaaa acttgaaata ttcagtaata 420 gtcaccgtcc acactggaga ccagcatcag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacta taacacctca agctcccacg acggaaatac agctgaccga ctacggagct 540 cttacattgg attgttcacc tagaacagga ttagacttta atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacttacc actgccctgg 660 acctcgggag cttcaacatc acaagagact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtactag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacagaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgtagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catcgtgata 1140 ggagtaggtg aaaaagcttt gaaactaagc tggttcaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaaccgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggttagg attaaactca aggagcacgt ccctctcgat gacgtgcatt 1440 gcagttggcc tagtaacact atacctagga gtcatggttc aggcg 1485 // ID MK529753; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529753; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH18111101 polyprotein, envelope protein E region, DE (POLY) gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; de9bfdc455564010973a75203f17379f. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH18111101" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Nov-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33595.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 292 C; 387 G; 318 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagcc 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529754; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529754; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH18111102 polyprotein, envelope protein E region, DE (POLY) gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; 3eb657b904348df7c42f51f6bd428d4a. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH18111102" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Nov-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33596.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 291 C; 387 G; 319 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagct 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529755; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529755; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH18111104 polyprotein, envelope protein E region, DE (POLY) gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; 49fa347c0f51d94ac1d9ea140fc022a7. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH18111104" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Nov-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33597.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLLTCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALTLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGVGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 489 A; 299 C; 383 G; 314 T; 0 other; atgcgatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tactggaaca tggaagttgc gtcaccacca tggcaaaaga caaaccaaca 120 ctggacattg aactcttgaa gacggaagtt acaaaccctg ccgtcctacg caaactgtgc 180 attgaagcta agatatcaaa caccaccact gactcaagat gtccaacaca aggagaagcc 240 acactggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcggaaaa ggaagcctac taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaagatagtt caatatgaaa acttgaaata ttcagtaata 420 gtcaccgtcc acactggaga ccagcatcag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacta taacacctca agctcccacg acggaaatac agctgaccga ctacggagct 540 cttacattgg attgttcacc tagaacagga ttagacttta atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacttacc actgccctgg 660 acctcgggag cttcaacatc acaagagact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtactag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacagaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgtagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catcgtgata 1140 ggagtaggtg aaaaagcttt gaaactaagc tggttcaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaaccgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggttagg attaaactca aggagcacgt ccctctcgat gacgtgcatt 1440 gcagttggcc tagtaacact atacctagga gtcatggttc aggcg 1485 // ID MK529756; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529756; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH18111105 polyprotein, envelope protein E region, DE (POLY) gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; de9bfdc455564010973a75203f17379f. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH18111105" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Nov-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33598.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 292 C; 387 G; 318 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagcc 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529757; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529757; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH18111201 polyprotein, envelope protein E region, DE (POLY) gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; 873d000e2f4548f070e1f8faf74ef9e1. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH18111201" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Nov-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33599.1" FT /translation="MRCVGISSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 489 A; 292 C; 386 G; 318 T; 0 other; atgagatgcg tgggaataag cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagcc 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgtgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK529758; SV 1; linear; genomic RNA; STD; VRL; 1485 BP. XX AC MK529758; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Dengue virus 1 isolate JH18111503 polyprotein, envelope protein E region, DE (POLY) gene, partial cds. XX KW . XX OS Dengue virus 1 OC Viruses; Riboviria; Flaviviridae; Flavivirus. XX RN [1] RP 1-1485 RA Guo X., Wang X.; RT "Molecular epidemiological survey of dengue virus in Jinghong City, China, RT 2018"; RL Unpublished. XX RN [2] RP 1-1485 RA Guo X., Wang X.; RT ; RL Submitted (15-FEB-2019) to the INSDC. RL Division of Arborvirus Disease Contral, Yunnan Institute of Parasitic RL Diseases, Yunnan Provincial Key Laboratory of Vector-borne Diseases Control RL and Research, 6 Xiyuan Road, Pu'er, Yunnan 665000, China XX DR MD5; 00c6367e83bb3a9c0f49cf95e4c46fb0. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1485 FT /organism="Dengue virus 1" FT /host="Homo sapiens" FT /isolate="JH18111503" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="Nov-2018" FT /db_xref="taxon:11053" FT gene <1..>1485 FT /gene="POLY" FT CDS <1..>1485 FT /codon_start=1 FT /gene="POLY" FT /product="polyprotein" FT /protein_id="QBP33600.1" FT /translation="MRCVGIGSRDFVEGLSGATWVDVVLEHGSCVTTMAKDKPTLDIEL FT LKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTFVDRGWGNG FT CGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNESTEHGTTAT FT ITPQAPTTEIQLTDYGALKLDCSPRTGLDFNEMVLLTMKEKSWLVHKQWFLDLPLPWTS FT GASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAG FT HLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQ FT DEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIG FT KMFEATARGARRMAILGDTAWDFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIG FT IGVLLTWLGLNSRSTSLSMTCIAVGLVTLYLGVMVQA" FT mat_peptide 1..1485 FT /gene="POLY" FT /product="envelope protein E" XX SQ Sequence 1485 BP; 488 A; 293 C; 387 G; 317 T; 0 other; atgagatgcg tgggaatagg cagcagggac ttcgtggaag gactgtcagg agcaacttgg 60 gtagatgtgg tgttggaaca tggaagttgc gtcactacca tggcaaaaga taaaccaaca 120 ttggacattg aactcttgaa gacggaagtc acaaaccctg ccgtcctgcg caaactgtgc 180 attgaagcta aaatatcaaa taccaccact gactcaagat gtccaacaca aggagaagcc 240 acattggtgg aagaacaaga cgcgaacttt gtgtgtcgac gaacgtttgt ggacagaggc 300 tggggcaatg gctgtgggct cttcgggaaa ggaagcctta taacgtgcgc taagttcaag 360 tgtgtgacaa aactggaagg aaaaatagtt caatatgaaa acttgaagta ttcagtaata 420 gtcaccgtcc acactggaga ccagcaccag gtgggaaatg aaagcacaga acatgggaca 480 actgcaacca taacacctca agctcctacg acagaaatac agctgaccga ctacggagct 540 cttaaattgg attgttcacc tagaacagga ctggacttca atgaaatggt gttgttgaca 600 atgaaagaaa aatcatggct agtccacaaa caatggtttc tagacctacc actgccttgg 660 acctcgggag cttcaacatc acaagaaact tggaacagac aagatttgct ggtgacattt 720 aagacagctc atgcaaagaa gcaggaagta gtcgtgctag gatcacaaga aggagcaatg 780 cacactgcgt tgaccggagc gacggaaatc caaacgtctg gaacgacaac aatttttgca 840 ggacacttga aatgcagact aaagatggac aaactgactc taaaagggat gtcatatgtg 900 atgtgcacag gctcattcaa gctagagaaa gaagtggctg agacccagca tggaaccgtt 960 ctagtgcaga ttaaatacga aggaacagat gcaccatgca agatcccttt ttcgacccaa 1020 gatgaaaaag gagtaaccca gaatgggaga ttgataacag ccaaccccat agtcactgac 1080 aaagaaaaac cagtcaacat tgaggcagaa ccgccttttg gtgagagtta catagtgata 1140 ggagcaggtg aaaaagcttt gaaactaagc tggtttaaga aaggaagcag catagggaaa 1200 atgtttgagg caactgccag aggagcacga aggatggcca tactgggaga caccgcatgg 1260 gactttggtt ctataggagg agtgttcacg tctgttggaa aattagtaca ccagattttt 1320 ggaactgcat atggagtttt gttcagcggt gtttcctgga ccatgaaaat aggaataggg 1380 gttctgctga catggctagg attaaactca aggagcacgt ccctttcgat gacgtgcatt 1440 gcagttggcc tagtaacgct atacttagga gtcatggttc aggcg 1485 // ID MK598338; SV 1; linear; viral cRNA; STD; VRL; 11799 BP. XX AC MK598338; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Rabies lyssavirus isolate 18537, complete genome. XX KW . XX OS Rabies lyssavirus OC Viruses; Riboviria; Negarnaviricota; Haploviricotina; Monjiviricetes; OC Mononegavirales; Rhabdoviridae; Lyssavirus. XX RN [1] RP 1-11799 RA Forro B., Banyai K.; RT ; RL Submitted (05-MAR-2019) to the INSDC. RL New Pathogen Discovery, Institute for Veterinary Medical Research, Hungaria RL krt. 21., Budapest H-1143, Hungary XX DR MD5; 27cd3d650af90a902044eb0ed7350377. XX CC ##Assembly-Data-START## CC Assembly Method :: Geneious v. 9.1.8 CC Sequencing Technology :: IonTorrent CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..11799 FT /organism="Rabies lyssavirus" FT /host="red fox" FT /isolate="18537" FT /mol_type="viral cRNA" FT /country="Hungary" FT /collection_date="2006" FT /db_xref="taxon:11292" FT gene 17..1369 FT /gene="N" FT CDS 17..1369 FT /codon_start=1 FT /gene="N" FT /product="nucleoprotein" FT /protein_id="QDZ26162.1" FT /translation="MDADKIVFKVNNQVISLKPEIIVDQYEYKYPAIKDLKKPCITLGK FT APDLNKAYKSVLSGMNAAKLDPDDVCSYLAAAMQFFEGTCPEDWTSYGIWIARKGDKIT FT PDSLVEIKRTDVEGNWALTGGMELTRDPTVSEHASLVGLLLSLYRLSKISGQNTGNYKT FT NIADRIEQIFETAPFVKIVEHHTLMTTHKMCANWSTIPNFRFLAGTYDMFFSRVEHLYS FT AIRVGTVVTAYEDCSGLVSFTGFIKQINLTAREAILYFFHKNFEEEIRRMFEPGQETAV FT PHSYFIHFRSLGLSGKSPYSSNAVGHVFNLIHFVGCYMGQVRSLNATVIAACAPHEMSV FT LGGYLGEEFFGRGTFERRFFRDEKELQEYEAAELTKTDVALADDGTVNSDDEDYFSGET FT RSPEAVYTRIMMNGGRLKRSHIRRYVSVSSNHQARPNSFAEFLNKTYSNDS" FT gene 1460..2353 FT /gene="P" FT CDS 1460..2353 FT /codon_start=1 FT /gene="P" FT /product="phosphoprotein" FT /protein_id="QDZ26163.1" FT /translation="MSKIFVNPSAIRAGLADLEMAEETVDLINKNIEDNQAHLQGEPIE FT VDNLPEDMRRLHLDDGKSSNFGEMAKAGEGKYREDFQMDEGEDPSLLFQSYLDNVGIQI FT VRQMRSGERFLKIWSQTVEEIISYVAVNFPSPPGRSSEDKSTQTTGREPKKETTSTPSQ FT RESKSSKARMAAQAASGPPALEWSATNEEDDLSVEAEIAHQIAESFSKKYKFPSRSSGI FT FLYNFEQLKMNLDDIVKEAKNVPGVTRLAHDGSKLPLRCVLGWVALANSKKFQLLAEAD FT KLSKIMQDDLNRYASC" FT gene 2443..3051 FT /gene="M" FT CDS 2443..3051 FT /codon_start=1 FT /gene="M" FT /product="matrix protein" FT /protein_id="QDZ26164.1" FT /translation="MNFLRKIVKNCRDEDAQKPSPVSAPPDDDDLWLPPPEYVPLKELT FT SKKNMRNFCINGEVKVCSPNGYSFRILRHILRSFDEIYSGNHRMIGLVKVVIGLALSGA FT PVPEGMNWVYKLRRTLIFQWADSRGPLEGEELEYSQEITWDDDTEFVGLQIRVSARQCH FT IQGKIWCINMNSRACQLWSDMSLQTQRSEEDKDSSLLLE" FT gene 3263..4837 FT /gene="G" FT CDS 3263..4837 FT /codon_start=1 FT /gene="G" FT /product="glycoprotein" FT /protein_id="QDZ26165.1" FT /translation="MFPQALLFVSLLVFSLCFGKFPIYTIPDKLGPWSPIDIHHLSCPN FT NLVVEDEGCTNLSGFSYMELKVGYISAIKVNGFTCTGVVTEAETYTNFVGYVTTTFKRK FT HFRPTPDACRAAYNWKMAGDPRYEESLHNPYPDYHWLRTVKTTKESLIVISPSVADLDP FT YDKSLHSRVFPSGKCSGITVSSTYCSTNHDYTIWMPENLRLGTSCDIFINSRGKRASKG FT SKTCGFVDERGLYKSLKGACKLKLCGVLGLRLMDGTWVAMQTSDETKWCPPDQLVNLHD FT FRSDEIEHLVVEELVKKREECLDALESIMTTKSVSFRRLSHLRKLVPGFGKAYTIFNKT FT LMEADAHYKSVRTWNEIIPSKGCLRVGGRCHPHVNGVFFNGIILGPDGHVLIPEMQSSL FT LQQHMELLESSVIPLMHPLADPSTVFKEGDEAEDFVEVHLPDVHKQVSGVDLVLPNWGK FT YVLLSAGALIALMLIIFLLTCCRRVSRPESTQHSLGGKGRKVSITPQSGKVISSWESYK FT SGGETRL" FT gene 5356..11739 FT /gene="L" FT CDS 5356..11739 FT /codon_start=1 FT /gene="L" FT /product="RNA dependent RNA polymerase" FT /protein_id="QDZ26166.1" FT /translation="MLDPGEVYDDPSDPVESEAEPRGAPTVPNILRNSDYNLNSPLIED FT PARLMLEWLKTGNRPYRMTPTDNCSRSYKVLKDYFKKVDLGSLKVGGTAAQSMISLWLY FT GAHSESNRSRRCITDLAHFYSKSSPIEKLLNCTLGNRGLKIPPEGVLSSLERVDYDKAF FT GRYLANTYSSYLFFHVITLYMNALDWDEEKTILALWRDLTSVDIGKDLVKFKDQIWGLL FT IVTKDFVYSQSSNCLFDRNYTLMLKDLFLSRFNSLMILLSPPEPRYSDDLISQLCQLYI FT AGDQVLSMCGNSGYEVIKILEPYVVNSLVQRAEKFRPLIHSLGDFPVFIKDKVSQLEGT FT FGPSAKKFFRVLDQFDNIHDLVFVYGCYRHWGHPYIDYRKGLSKLYDQVHIKKVIDKSY FT QECLASDLARRILRWGFDKYSKWYLDSRFLARDHPLTPYIKTQTWPPKHIVDLVGDTWH FT KLPITQIFEIPESMDPSEILDDKSHSFTRTRLASWLSENRGGPVPSEKVIITALSKPPV FT NPREFLKSIDLGGLPDEDLIIGLKPKERELKIEGRFFALMSWNLRLYFVITEKLLANYI FT LPLFDALTMTDNLNKVFKKLIDRVTGQGLLDYSRVTYAFHLDYEKWNNHQRLESTEDVF FT SVLDQVFGLKRVFSRTHEFFQKSWIYYSDRSDLIGLWEDQIYCLDMSNGPTCWNGQDGG FT LEGLRQKGWSLVSLLMIDRESQTRNTRTKILAQGDNQVLCPTYMLSPGLSREGLLYELE FT SISRNALSIYRAIEEGASKLGLIIKKEETMCSYDFLIYGKTPLFRGNILVPESKRWARV FT SCISNDQIVNLANIMSTVSTNALTVAQHSQSLIKPMRDFLLMSVQAVFHYLLFSPILKG FT RVYKILSAEGESFLLAMSRIIYLDPSLGGVSGMSLGRFHIRQFSDPVSEGLSFWREIWL FT SSHESWIHALCQEAGNPDLGERTLESFTRLLEDPTTLNIKGGASPTILLKDAIRKALYD FT EVDKVENSEFREAILLSKTHRDNFILFLKSVEPLFPRFLSELFSSSFLGIPESIIGLIQ FT NSRTIRRQFRKSLSRTLEESFYNSEIHGINRMTQTPQRVGRVWPCSSERADLLREISWG FT RKVVGTTVPHPSEMLGLLPKSSISCTCGATGGGNPRVSVSVLPSFDQSFFSRGPLKGYL FT GSSTSMSTQLFHAWEKVTNVHVVKRALSLKESINWFITRNSNLAQTLIRNIMSLTGPDF FT PLEEAPVFKRTGSALHRFKSARYSEGGYSSVCPNLLSHISVSTDTMSDLTQDGKNYDFM FT FQPLMLYAQTWTSELVQRDTRLRDSTFHWHLRCNRCVRPIDDITLETSQIFEFPDVSKR FT ISRMVSGAVPHFQKLPDIRLRPGDFESLSSREKSRHIGSAQGLLYSILVAIHDSGYNDG FT TIFPVNIYGKVSPRDYLRGLARGVLIGSSICFLTRMTNININRPLELISGVISYILLRL FT DNHPSLYIMLREPSLRGEIFSIPQKIPAAYPTTMKEGNRSILCYLQHVLRYEREVITAS FT PENDWLWIFSDFRSAKMTYLTLITYQSHLLLQRVERNLSKSMRANLRQMSSLMRQVLGG FT HGEDTLESDDDIQRLLKDSLRRTRWVDQEVRHAARTMTGDYSPYKKVSRKAGCSEWVCS FT AQQVAVSTSANPAPVSELDIRALSKRFQNPLISGLRVVQWATGAHYKLKPILDDLNVFP FT SLCLVVGDGSGGISRAVLNMFPDAKLVFNSLLEVNDLMASGTHPLPPSAIMSGGDDIVS FT RVIDFDSIWEKPSDLRNLATWRYFQSVQKQVNMSYDLIICDAEVTDIASINRITLLMSD FT FALSIDGPLYLVFKTYGTMLVNPDYKAIQHLSRAFPSVTGFITQVTSSFSSELYLRFSK FT RGKFFRDPEYLTSSTLREMSLVLFNCSSPKSEMQRARSLNYQDLVRGFPEEIISNPYNE FT MIITLIDSDVESFLVHKMVDDLELQRGTLSKVAIIISIMIVFSNRVFNVSKPLTDPLFY FT PPSDPKILRHFNICCSTMMYLSTALGDVLSFARLHDLYNRPITYYFRKQVIRGNIYLSW FT SWSDDASVFKRVACNSSLSLSSHWIRLIYKIVKTTRLVGSIEDLSGEVERHLHGYNRWI FT TLEDIRSRSSLLDYSCL" XX SQ Sequence 11799 BP; 3356 A; 2588 C; 2727 G; 3128 T; 0 other; atgtaacacc cctacaatgg atgccgacaa gattgtattc aaagtcaaca atcaggtgat 60 ttctttgaag cctgagatca tcgtggatca atatgagtac aagtaccctg ctatcaaaga 120 cttgaaaaag ccctgtataa ccctagggaa agcccccgac ttaaacaaag catacaagtc 180 agttttatca ggcatgaatg cagccaaact tgatcctgat gatgtatgtt cctacttggc 240 agcagcaatg cagttctttg aggggacgtg tccggaggat tggaccagct atggaatctg 300 gattgcaaga aaaggagaca agatcacccc ggattctctg gtggaaataa agcgtactga 360 tgtagaagga aattgggctc tgacaggagg catggagctg acaagggacc ccactgtctc 420 tgaacatgcg tctttagtcg gccttctctt gagtctgtat aggttgagca aaatatcagg 480 acaaaacact ggtaactata aaacaaacat cgcagatagg atagagcaga ttttcgagac 540 cgcccctttt gttaaaatcg tggaacacca tactctaatg acaactcaca aaatgtgtgc 600 taattggagt actataccaa acttcagatt tttggccggg acctatgaca tgtttttctc 660 ccgggttgag catctatatt cagcaatcag agtgggcacg gttgtcactg cttatgaaga 720 ctgttcaggt ctggtatcgt ttactgggtt cataaagcag atcaatctca ccgcaagaga 780 agcaatacta tacttcttcc ataagaactt tgaggaagag ataagaagaa tgtttgagcc 840 gggacaggag acagccgttc ctcactccta cttcattcac ttccgttcac tgggcttgag 900 tgggaagtct ccttactcat cgaatgctgt tggtcatgtg ttcaatctca ttcactttgt 960 tggatgctat atgggtcaag tcagatccct aaatgcaaca gttattgccg catgtgctcc 1020 ccatgagatg tctgttctgg ggggttatct gggagaggaa ttctttggga gaggaacatt 1080 cgaaagaaga ttcttcagag atgagaagga acttcaagaa tacgaggcgg ctgaactgac 1140 aaagaccgac gtagctttgg cagatgatgg aactgtcaac tctgacgatg aagactactt 1200 ctccggtgaa accagaagtc cagaggctgt ttatactcga attatgatga atggaggccg 1260 actgaagaga tcgcatatac ggagatatgt ctcagtcagt tcaaatcatc aagctcgtcc 1320 aaactcattt gctgaatttc taaacaagac atattcgaat gactcataag gagttgaatg 1380 acattgtgcc agaaatctat tgattgtgta catccatcat gaaaaaaact aacacccctc 1440 ctttcggacc atctcaaata tgagcaagat tttcgtcaat ccgagtgcta tcagagccgg 1500 tctggccgat cttgagatgg ctgaagagac tgttgatctg atcaataaaa acatagaaga 1560 caatcaggct catctccagg gagaacccat agaagtggac aatctccctg aggacatgcg 1620 gcgacttcac ctggatgatg gaaaatcatc caactttggt gagatggcca aagcggggga 1680 aggcaagtat cgagaggact ttcagatgga tgaaggagag gatcctagcc tcctgttcca 1740 gtcatacctg gacaatgttg gaatccaaat agtcagacaa atgaggtcgg gagagagatt 1800 cctcaagata tggtcacaga ccgtagaaga gattatatcc tatgttgcgg tcaactttcc 1860 cagccctcca ggaaggtcct cagaggacaa atcaacccaa actactggtc gagagcctaa 1920 gaaagagaca acatccaccc cttctcagag agaaagcaaa tcttcgaaag ccaggatggc 1980 agctcaagct gcctctggcc ctccagccct tgaatggtct gctaccaatg aagaggatga 2040 tctatcagta gaggctgaga ttgctcacca gattgctgaa agcttctcaa agaagtacaa 2100 atttccctct cgatcctcag ggatattctt gtataatttt gagcagttga agatgaacct 2160 tgatgatata gttaaagagg caaaaaatgt gccaggcgtg acccgtttgg ctcatgacgg 2220 atccaaactc cctctaagat gtgtactggg atgggttgct ttggccaatt ccaagaaatt 2280 ccaattgttg gcagaggccg acaagctaag taaaatcatg caggatgatt tgaatcgcta 2340 tgcatcctgc taaccgaact tttaaatttt tgtccctcta gacaataaaa tctgagatgc 2400 cctagagtcg acatgaaaaa aacaggcaac accactgata aaatgaactt tctacgcaag 2460 atagtgaaaa attgtaggga tgaggacgct caaaagccct ctcctgtgtc cgcccctccg 2520 gatgacgatg acctgtggct tccaccccct gaatacgtcc cgctgaaaga actcacaagc 2580 aagaagaaca tgaggaactt ttgtatcaac ggggaggtta aagtgtgtag cccaaatggt 2640 tactcattca ggatcctgcg gcacattctg agatcattcg acgagatata ctctgggaat 2700 cataggatga ttgggctggt caaagtcgtc attggactag ctttgtcagg agctccagtc 2760 cctgagggca tgaactgggt atacaaactg aggagaaccc ttatcttcca gtgggctgat 2820 tccaggggtc ctcttgaagg agaagagttg gaatactcac aggagatcac ttgggatgat 2880 gatactgagt tcgttggatt gcaaataaga gtaagtgcaa gacaatgtca tatccagggc 2940 aaaatctggt gtatcaacat gaactcaaga gcatgtcagc tatggtctga catgtctctc 3000 cagacacaaa ggtccgaaga ggacaaagac tcctctctgc ttctagaata atcggattat 3060 atcccgcaag tttatcactt gtatacctct ggaggagaga acatacgagc ttaactccaa 3120 cccttgggag caatagaaca aaaacatgtt atggtgccat taaaccgctg cattttatca 3180 aagtcaagtt aattaccttt acattttgag cctcttggat gtgaaaaaaa ctattaacat 3240 ccctcaaaag acttaaggaa aaatgtttcc tcaggctctt ttgtttgtat cccttctggt 3300 tttttcattg tgtttcggga aattccctat ttacacaata ccagacaaac ttggtccttg 3360 gagcccgatt gacatacatc atctcagctg cccaaacaat ttggttgtag aggacgaagg 3420 atgcaccaac ctgtcagggt tttcctacat ggaacttaaa gttggatata tctcagccat 3480 aaaagtgaac gggtttactt gcacgggcgt tgtgacagag gcagaaacct acactaactt 3540 tgttggttat gtcaccacca cgttcaaaag aaagcatttc cgtccaacac cagatgcatg 3600 tagagccgca tacaactgga agatggccgg tgaccccaga tatgaggagt ctctacacaa 3660 tccgtaccct gactaccatt ggctacgaac tgtaaaaacc actaaggagt ctctcattgt 3720 catatcccca agtgtggcag atttggaccc atatgacaaa tcccttcact caagggtctt 3780 ccctagtgga aagtgctcag gaataacagt gtcttctacc tactgctcaa ctaaccacga 3840 ttacaccatt tggatgcccg agaatctgag actagggacg tcttgtgaca tttttattaa 3900 tagtagagga aagagagcat ccaaagggag taagacctgc ggctttgtag atgagagagg 3960 cctgtataag tctctaaaag gagcatgcaa actcaagtta tgtggagttc ttggactcag 4020 acttatggat ggaacatggg tcgcgatgca aacatcagat gagaccaaat ggtgccctcc 4080 tgatcagttg gtgaatctgc acgactttcg ctcggatgaa attgagcatc ttgttgtaga 4140 ggagttggtc aagaagaggg aggagtgtct ggatgcacta gagtccatca tgaccaccaa 4200 gtcagtgagt ttcagacgtc tcagtcattt aagaaaactt gttcctgggt ttggaaaagc 4260 atatactata ttcaacaaga ccttgatgga ggcagatgct cactacaaat cagttcggac 4320 ttggaacgag atcatcccct caaaagggtg cttaagagtt ggagggagat gtcaccctca 4380 tgtgaacggg gtgtttttca atggcataat attagggcct gatggccatg ttctaatccc 4440 agagatgcag tcatccctcc tccagcaaca tatggagttg ttggaatcct cagttattcc 4500 cctgatgcac cccctggcag acccgtccac agttttcaag gaaggtgatg aggctgagga 4560 ctttgttgaa gttcaccttc ccgatgtgca caaacaggtc tcaggggtag acctggtcct 4620 cccaaactgg gggaagtatg tattgctgag tgcaggggcc ctgattgcct tgatgttgat 4680 aattttccta cttacatgtt gtagaagagt cagtcgacca gaatctacgc agcacagtct 4740 tggagggaaa gggaggaagg tgtcgatcac tccccaaagc gggaaggtta tatcttcatg 4800 ggagtcatat aagagtgggg gtgaaactag actgtaaagg ctggtcatcc ttttgacgct 4860 tcaagtctta aaggtcacat ccccctgggg ttggggggaa tctctgggtc caatagtcct 4920 ccttgaactc catgcaacag ggtagattta agagtcatga gactttcatt aatcatctcg 4980 gttgatcaaa ctaggtcatg tagattctca taatacggga aatcttctag cagtttcagt 5040 gaccaatggt gctttcattc tccaggaact ggtaccaaag gttgtagacg ggccgagagg 5100 tatttcggac gactccgcgc ctgggcacgg acagaagtca tagtgagtct cgtgatagca 5160 gactcagcat gagtttattg agaaaggcaa tctgcctccc atgaaggaca taagcaatag 5220 ctcacaatca tcttgcatct cagcaaaata tgcataatta caaagggctg ggccatctaa 5280 gcttttcagt cgagaaaaaa actgtagatc aaaagagcaa ctggcaacac ttctcatcct 5340 gaaccctata tcaagatgct agatccagga gaggtctatg atgaccccag tgatccagtc 5400 gagtcagagg ctgaacccag aggggccccc actgtcccta acatcttgag aaactctgac 5460 tacaatctca actccccttt gatagaagac cctgcgagac taatgttaga atggttgaaa 5520 acagggaata gaccttatcg gatgactccg acagacaatt gttccaggtc ttacaaagtt 5580 ttgaaagatt atttcaagaa ggtggatctg ggttctctga aagtgggcgg aactgctgca 5640 cagtcaatga tttctctttg gttatatggt gcccactctg aatcaaacag gagccggaga 5700 tgtataacag acttggctca tttctattca aagtcatccc ccatagagaa gctgttaaat 5760 tgtacgctag gaaatagagg gctgaaaatc ccccctgagg gggtgttaag ttctcttgag 5820 agggtcgatt acgataaggc atttgggagg tatcttgcca acacgtattc ctcttatttg 5880 tttttccatg taatcaccct atacatgaat gccctggact gggacgaaga aaaaaccatc 5940 ttggcattat ggagagattt aacctcagtg gacatcggga aggacttggt caagttcaaa 6000 gatcaaatat ggggactgct gattgtaacg aaggactttg tttactccca gagttctaac 6060 tgtctttttg acagaaacta tacacttatg ctaaaagatc tttttttgtc tcgcttcaac 6120 tccttaatga tcttgctctc tccccccgag ccccgatact cagacgactt gatatctcag 6180 ctgtgccagt tatacatcgc tggggatcag gtcttgtcca tgtgtggaaa ctccggatat 6240 gaagtcatta aaatattgga gccatatgtt gtaaatagtt tagtccagag agcagagaag 6300 tttaggcctc tcattcattc cttgggagac tttcctgtat ttataaaaga caaggtgagt 6360 cagcttgaag ggactttcgg tcccagtgcc aagaagtttt ttagggttct ggatcagttc 6420 gacaacatac atgatttggt ttttgtgtat ggctgttaca ggcattgggg gcatccctat 6480 atagattatc gaaagggtct atctaaacta tatgatcaag ttcacattaa gaaagtgata 6540 gacaagtcct accaagagtg tttggcaagc gacctagcca ggaggatcct cagatgggga 6600 tttgataaat actccaagtg gtatctggat tcacgattcc ttgctcgaga ccaccccttg 6660 actccttata tcaaaaccca gacatggcca cccaaacata tagtagactt agtgggggat 6720 acctggcaca agctcccgat cacgcaaatc tttgagattc ctgaatcaat ggacccgtca 6780 gaaatactgg atgacaaatc acattctttc accagaacaa gactagcttc ttggctgtca 6840 gagaaccgag gtgggcctgt tcccagtgag aaagttatta tcacagcctt gtctaagccg 6900 cctgtcaatc cccgagagtt tttaaaatct atagacctcg gaggattgcc agatgaggac 6960 ttaataattg gcctcaagcc aaaggaacga gaattgaaga ttgagggtcg attctttgct 7020 ctaatgtcat ggaatctaag attgtatttc gttatcaccg aaaagcttct ggctaattac 7080 atcttgccac tttttgacgc actgaccatg acagacaacc tgaacaaggt gtttaagaag 7140 ctgatcgacc gggtcactgg gcaagggctt ttggactatt cgagggttac atatgcattt 7200 catctggact atgaaaagtg gaataatcat caaagattag agtcaacaga ggatgtgttc 7260 tctgtcctgg atcaggtatt tggattgaag agagtgtttt ctagaacaca tgagtttttt 7320 cagaagtcat ggatttatta ttcggacaga tcagacctca tcgggttatg ggaggatcaa 7380 atatactgct tggatatgtc caacggccca acctgctgga atggccagga cggcgggcta 7440 gagggcttac ggcagaaggg ctggagtcta gtcagcttat tgatgataga tagagaatct 7500 caaaccagga acacaagaac caaaatacta gctcaaggag acaaccaggt tctatgtccg 7560 acatatatgt tgtcgccagg gctgtctaga gagggactcc tctatgagtt agagagcata 7620 tcaaggaatg cactttcaat ataccgagcc atcgaagaag gggcatccaa gctaggtctg 7680 atcatcaaga aggaagagac catgtgtagt tatgactttc tcatttatgg aaaaactccc 7740 ttgtttcgag gtaacatatt ggtgcctgaa tccaaaagat gggccagagt ctcgtgcatc 7800 tctaacgacc aaatagtcaa tcttgccaat ataatgtcga cagtgtctac caatgcgcta 7860 actgtggcac aacactctca gtctttgatc aagccgatga gggactttct gctcatgtca 7920 gtacaggcag tctttcacta cctgttattt agcccaatct tgaagggccg agtttacaag 7980 attctgagtg cagaagggga gagctttctc ctagccatgt cgaggataat ctatctagac 8040 ccttctttag gaggggtgtc tgggatgtct cttggaaggt ttcatatacg tcaattctca 8100 gaccctgtct ctgaagggtt gtccttctgg agagagatct ggttaagctc ccacgagtcc 8160 tggattcacg cgttgtgtca agaggctggg aacccagatc ttggagagag aacactcgag 8220 agcttcactc gccttctaga agatcctacc accttaaata ttaaaggagg tgccagtcct 8280 accattctac tcaaggatgc aatcagaaag gctctgtatg acgaagtgga caaggtggaa 8340 aactcagagt ttcgagaggc gatcttgttg tccaagaccc atagagataa cttcatactc 8400 ttcttaaaat ctgttgagcc tctgtttcct cgatttctca gtgagctctt cagttcgtct 8460 ttcttgggaa tccccgagtc aatcattgga ctgatacaaa actcccggac gataagaagg 8520 cagtttagaa agagtctctc aagaacttta gaagaatcct tctacaactc agagattcat 8580 gggattaatc ggatgaccca gacacctcaa agggtcggga gggtgtggcc ttgctcttca 8640 gagagggcag acctacttag ggagatctct tggggaagaa aagtggtagg cacgacagtt 8700 cctcaccctt ctgagatgtt ggggttactt ccaaaatctt ccatctcttg cacttgtgga 8760 gcaacagggg gaggcaatcc tagagtttct gtatcagtac tcccgtcctt tgatcagtca 8820 tttttttcaa gaggtcccct aaagggatac ttgggctcat ccacctctat gtcaacccaa 8880 ctattccatg catgggaaaa agtcactaat gttcatgtgg tgaaaagggc tctatcttta 8940 aaagaatcta taaactggtt cattactaga aattccaact tggctcaaac cctaattagg 9000 aatattatgt ctctgacagg ccctgatttc cctctagagg aggcccctgt ttttaaaagg 9060 acagggtcag ccttgcatag gttcaagtct gccagataca gcgaaggagg gtactcttct 9120 gtttgcccga acctcctctc tcatatctct gttagtacag acactatgtc tgacttgact 9180 caagacggga agaactacga cttcatgttc cagccattga tgctttatgc gcagacgtgg 9240 acatcagagc tggtacagag agacacaagg ctgagggact ctacgtttca ttggcacctc 9300 cggtgtaata ggtgtgtaag gcccatcgac gatataacac tggagacttc tcagatcttc 9360 gagttcccgg atgtatcaaa aagaatatcc agaatggtct ctggggctgt gcctcacttc 9420 cagaaacttc ctgatatccg tctgagaccc ggtgattttg aatctctaag tagtagagaa 9480 aagtctcgcc atatagggtc ggctcaggga ctcttatact caatcttagt ggcaattcac 9540 gactcaggat acaatgatgg aaccatcttt cctgtcaaca tttacggcaa agtctctcct 9600 agagattatt tgagagggct cgcgagagga gtcttgatag gatcctcgat ttgcttcttg 9660 acaagaatga caaatatcaa catcaataga cctctagagt tgatctcagg agtaatctca 9720 tatatcctcc tgaggttaga taatcacccc tctttgtaca taatgctcag agaaccgtct 9780 cttagaggag aaatattctc tatccctcag aaaatccccg ccgcttatcc aaccactatg 9840 aaagaaggca acagatcgat tttgtgttat ctccaacatg tgctacgcta tgagcgagag 9900 gtgattacag cgtctccaga gaatgactgg ctgtggatct tctctgactt tagaagtgcc 9960 aaaatgacgt acctgaccct cattacttac cagtctcatc tcctactcca aagggttgag 10020 agaaatttgt ctaagagtat gagagctaac ctgcgacaaa tgagttcttt gatgaggcaa 10080 gtgctgggtg ggcacggaga agatacttta gagtccgacg acgacattca acgattacta 10140 aaagactctt tgcggagaac aaggtgggtg gatcaagagg tgcgtcatgc agctagaacc 10200 atgactggag attatagccc ctacaagaaa gtgtctcgta aagcaggatg ttcagaatgg 10260 gtctgctctg ctcaacaggt tgcagtctcc acctcagcaa acccagcccc tgtctcagag 10320 cttgacataa gggccctctc taagaggttt caaaaccctc tgatctcggg cctgagagtg 10380 gttcagtggg caactggcgc ccattataaa cttaagccca ttctggatga tcttaacgtt 10440 ttcccatccc tctgtcttgt agttggggac gggtcagggg ggatatcaag ggcagttctt 10500 aacatgttcc cagatgccaa gcttgtgttc aacagcctct tggaggtgaa tgatctgatg 10560 gcttccggaa cacatccatt gcctccttca gcaatcatga gtggtggaga tgacatcgtt 10620 tccagagtga tagattttga ctcaatctgg gaaaaaccgt ccgacctgag gaacttggcc 10680 acctggagat acttccagtc agtccaaaaa caggtcaaca tgtcttatga cctcatcatt 10740 tgtgatgcag aagtcactga cattgcatct atcaaccgga taaccctgtt aatgtctgat 10800 ttcgcgttgt ctatagatgg accactttat ttggtcttca aaacttacgg gactatgctt 10860 gtaaacccag actataaggc tattcaacac ctgtcaagag cgttcccctc agtcactggg 10920 tttataaccc aagtgacctc gtccttttca tcagagctat atctccgatt ctccaaacga 10980 ggaaagtttt tcagagatcc cgagtacttg acctcttcca cccttcggga aatgagcctt 11040 gtattgttca attgcagcag ccccaagagt gagatgcaaa gagctcgttc cttaaactat 11100 caagatcttg taaggggttt ccctgaagaa atcatatcaa atccttacaa tgagatgatc 11160 ataactctga ttgacagtga tgtagaatct ttcctagtcc acaagatggt ggatgatctt 11220 gagttacaga ggggaaccct gtctaaagtg gctatcatta tatccatcat gatagttttt 11280 tccaacagag tcttcaacgt ctccaaaccc ttgactgacc ccttgttcta tccaccgtcc 11340 gatcccaaaa tcctgaggca cttcaacatc tgttgcagta ctatgatgta tctatccacc 11400 gctttaggcg atgtccttag cttcgcaaga cttcatgacc tgtataaccg acctataact 11460 tattacttca gaaagcaagt cattcgaggg aatatttatc tatcttggag ttggtctgac 11520 gacgcctcag tgttcaagag ggtagcctgt aattccagtt tgagtctatc gtctcattgg 11580 atcaggttga tttacaagat agtgaagact actagactcg ttggcagcat tgaggactta 11640 tctggagagg tggaaagaca ccttcacggg tacaacaggt ggatcaccct cgaggatatc 11700 agatcgagat catctctact agactacagc tgcttgtaaa ccgagtactc ccagaagctt 11760 gtacacgcta agactcttgt gcggtgtgtc ttgaaaaaa 11799 // ID MK598339; SV 1; linear; viral cRNA; STD; VRL; 11799 BP. XX AC MK598339; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Rabies lyssavirus isolate 12408, complete genome. XX KW . XX OS Rabies lyssavirus OC Viruses; Riboviria; Negarnaviricota; Haploviricotina; Monjiviricetes; OC Mononegavirales; Rhabdoviridae; Lyssavirus. XX RN [1] RP 1-11799 RA Forro B., Banyai K.; RT ; RL Submitted (05-MAR-2019) to the INSDC. RL New Pathogen Discovery, Institute for Veterinary Medical Research, Hungaria RL krt. 21., Budapest H-1143, Hungary XX DR MD5; 1ea7334ce3725fb5b5a2e0f2107cad0b. XX CC ##Assembly-Data-START## CC Assembly Method :: Geneious v. 9.1.8 CC Sequencing Technology :: IonTorrent CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..11799 FT /organism="Rabies lyssavirus" FT /host="red fox" FT /isolate="12408" FT /mol_type="viral cRNA" FT /country="Hungary" FT /collection_date="2007" FT /db_xref="taxon:11292" FT gene 17..1369 FT /gene="N" FT CDS 17..1369 FT /codon_start=1 FT /gene="N" FT /product="nucleoprotein" FT /protein_id="QDZ26167.1" FT /translation="MDADKIVFKVNNQVISLKPEIIVDQYEYKYPAIKDLKKPCITLGK FT APDLNKAYKSVLSGMNAAKLDPDDVCSYLAAAMQFFEGTCPEDWTSYGIWIARKGDKIT FT PDSLVEIKRTDVEGNWALTGGMELTRDPTVSEHASLVGLLLSLYRLSKISGQNTGNYKT FT NIADRIEQIFETAPFVKIVEHHTLMTTHKMCANWSTIPNFRFLAGTYDMFFSRVEHLYS FT AIRVGTVVTAYEDCSGLVSFTGFIKQINLTAREAILYFFHKNFEEEIRRMFEPGQETAV FT PHSYFIHFRSLGLSGKSPYSSNAVGHVFNLIHFVGCYMGQVRSLNATVIATCAPHEMSV FT LGGYLGEEFFGRGTFERRFFRDEKELQEYEAAELTKTDVALADDGTVNSDDEDYFSGET FT RSPEAVYTRIMMNGGRLKRSHIRRYVSVSSNHQARPNSFAEFLNKTYSNDS" FT gene 1460..2353 FT /gene="P" FT CDS 1460..2353 FT /codon_start=1 FT /gene="P" FT /product="phosphoprotein" FT /protein_id="QDZ26168.1" FT /translation="MSKIFVNPSAIRAGLADLEMAEETVDLINKNIEDNQAHLQGEPIE FT VDNLPEDMRRLHLDDGKSSNFGEMAKAGEGKYREDFQMDEGEDPSLLFQSYLDNVGIQI FT VRQMRSGERFLKIWSQTVEEIISYVAVNFPSPPGRSSEDKSTQTTGREPKKETTSTPSQ FT RESKSSKARMAAQAASGPPALEWSATNEEDDLSVEAEIAHQIAESFSKKYKFPSRSSGI FT FLYNFEQLKMNLDDIVKEAKNVPGVTRLAHDGSKLPLRCVLGWVALANSKKFQLLAEAD FT KLSKIMQDDLNRYASC" FT gene 2443..3051 FT /gene="M" FT CDS 2443..3051 FT /codon_start=1 FT /gene="M" FT /product="matrix protein" FT /protein_id="QDZ26169.1" FT /translation="MNFLRKIVKNCRDEDAQKPSPVSAPPDDDDLWLPPPEYVPLKELT FT SKKNMRNFCINGEVKVCSPNGYSFRILRHILRSFDEIYSGNHRMIGLVKVVIGLALSGA FT PVPEGMNWVYKLRRTLIFQWADSRGPLEGEELEYSQEITWDDDTEFVGLQIRVSARQCH FT IQGKIWCINMNSRACQLWSDMSLQTQRSEEDKDSSLLLE" FT gene 3263..4837 FT /gene="G" FT CDS 3263..4837 FT /codon_start=1 FT /gene="G" FT /product="glycoprotein" FT /protein_id="QDZ26170.1" FT /translation="MFPQALLFVSLLVFSLCFGKFPIYTIPDKLGPWSPIDIHHLSCPN FT NLVVEDEGCTNLSGFSYMELKVGYISAIKVNGFTCTGVVTEAETYTNFVGYVTTTFKRK FT HFRPTPDACRAAYNWKMAGDPRYEESLHNPYPDYHWLRTVKTTKESLIVISPSVADLDP FT YDKSLHSRVFPSGKCSGITVSSTYCSTNHDYTIWMPENLRLGTSCDIFINSRGKRASKG FT SKTCGFVDERGLYKSLKGACKLKLCGVLGLRLMDGTWVAMQTSDETKWCPPDQLVNLHD FT FRSDEIEHLVVEELVKKREECLDALESIMTTKSVSFRRLSHLRKLVPGFGKAYTIFNKT FT LMEADAHYKSVRTWNEIIPSKGCLRVGGRCHPHVNGVFFNGIILGPDGHVLIPEMQSSL FT LQQHMELLESSVIPLMHPLADPSTVFKEGDEAEDFVEVHLPDVHKQVSGVDLGLPNWGK FT YVLLSAGALIALMLIIFLLTCCRRVSRPESTQHSLGGKGRKVSITPQSGKVISSWESYK FT SGGETRL" FT gene 5356..11739 FT /gene="L" FT CDS 5356..11739 FT /codon_start=1 FT /gene="L" FT /product="RNA dependent RNA polymerase" FT /protein_id="QDZ26171.1" FT /translation="MLDPGEVYDDPSDPVESEAEPRGAPTVPNILRNSDYNLNSPLIED FT PARLMLEWLKTGNRPYRMTPTDNCSRSYKVLKDYFKKVDLGSLKVGGTAAQSMISLWLY FT GAHSESNRSRRCITDLAHFYSKSSPIEKLLNCTLGNRGLKIPPEGVLSSLERVDYDKAF FT GRYLANTYSSYLFFHVITLYMNALDWDEEKTILALWRDLTSVDIGKDLVKFKDQIWGLL FT IVTKDFVYSQSSNCLFDRNYTLMLKDLFLSRFNSLMILLSPPEPRYSDDLISQLCQLYI FT AGDQVLSMCGNSGYEVIKILEPYVVNSLVQRAEKFRPLIHSLGDFPVFIKDKVSQLEGT FT FGPSAKKFFRVLDQFDNIHDLVFVYGCYRHWGHPYIDYRKGLSKLYDQVHIKKVIDKSY FT QECLASDLARRILRWGFDKYSKWYLDSRFLARDHPLTPYIKTQTWPPKHIVDLVGDTWH FT KLPITQIFEIPESMDPSEILDDKSHSFTRTRLASWLSENRGGPVPSEKVIITALSKPPV FT NPREFLKSIDLGGLPDEDLIIGLKPKERELKIEGRFFALMSWNLRLYFVITEKLLANYI FT LPLFDALTMTDNLNKVFKKLIDRVTGQGLLDYSRVTYAFHLDYEKWNNHQRLESTEDVF FT SVLDQVFGLKRVFSRTHEFFQKSWIYYSDRSDLIGLWEDQIYCLDMSNGPTCWNGQDGG FT LEGLRQKGWSLVSLLMIDRESQTRNTRTKILAQGDNQVLCPTYMLSPGLSREGLLYELE FT SISRNALSIYRAIEEGASKLGLIIKKEETMCSYDFLIYGKTPLFRGNILVPESKRWARV FT SCISNDQIVNLANIMSTVSTNALTVAQHSQSLIKPMRDFLLMSVQAVFHYLLFSPILKG FT RVYKILSAEGESFLLAMSRIIYLDPSLGGVSGMSLGRFHIRQFSDPVSEGLSFWREIWL FT SSHESWIHALCQEAGNPDLGERTLESFTRLLEDPTTLNIKGGASPTILLKDAIRKALYD FT EVDKVENSEFREAILLSKTHRDNFILFLKSVEPLFPRFLSELFSSSFLGIPESIIGLIQ FT NSRTIRRQFRKSLSRTLEESFYNSEIHGINRMTQTPQRVGRVWPCSSERADLLREISWG FT RKVVGTTVPHPSEMLGLLPKSSISCTCGATGGGNPRVSVSVLPSFDQSFFSRGPLKGYL FT GSSTSMSTQLFHAWEKVTNVHVVKRALSLKESINWFITRNSNLAQTLIRNIMSLTGPDF FT PLEEAPVFKRTGSALHRFKSARYSEGGYSSVCPNLLSHISVSTDTMSDLTQDGKNYDFM FT FQPLMLYAQTWTSELVQRDTRLRDSTFHWHLRCNRCVRPIDDITLETSQIFEFPDVSKR FT ISRMVSGAVPHFQKLPDIRLRPGDFESLSSREKSRHIGSAQGLLYSILVAIHDSGYNDG FT TIFPVNIYGKVSPRDYLRGLARGVLIGSSICFLTRMTNININRPLELISGVISYILLRL FT DNHPSLYIMLREPSLRGEIFSIPQKIPAAYPTTMKEGNRSILCYLQHVLRYEREVITAS FT PENDWLWIFSDFRSAKMTYLTLITYQSHLLLQRVERNLSKSMRANLRQMSSLMRQVLGG FT HGEDTLESDDDIQRLLKDSLRRTRWVDQEVRHAARTMTGDYSPYKKVSRKAGCSEWVCS FT AQQVAVSTSANPAPVSELDIRALSKRFQNPLISGLRVVQWATGAHYKLKPILDDLNVFP FT SLCLVVGDGSGGISRAVLNMFPDAKLVFNSLLEVNDLMASGTHPLPPSAIMSGGDDIVS FT RVIDFDSIWEKPSDLRNLATWRYFQSVQKQVNMSYDLIICDAEVTDIASINRITLLMSD FT FALSIDGPLYLVFKTYGTMLVNPDYKAIQHLSRAFPSVTGFITQVTSSFSSELYLRFSK FT RGKFFRDPEYLTSSTLREMSLVLFNCSSPKSEMQRARSLNYQDLVRGFPEEIISNPYNE FT MIITLIDSDVESFLVHKMVDDLELQRGTLSKVAIIISIMIVFSNRVFNVSKPLTDPLFY FT PPSDPKILRHFNICCSTMMYLSTALGDVLSFARLHDLYNRPITYYFRKQVIRGNIYLSW FT SWSDDASVFKRVACNSSLSLSSHWIRLIYKIVKTTRLVGSIEDLSGEVERHLHGYNRWI FT TLEDIRSRSSLLDYSCL" XX SQ Sequence 11799 BP; 3358 A; 2591 C; 2726 G; 3124 T; 0 other; atgtaacacc cctacaatgg atgccgacaa gattgtattc aaagtcaaca atcaggtgat 60 ttctttgaag cctgagatca tcgtggatca atatgagtac aagtaccctg ctatcaaaga 120 cttgaaaaag ccctgtataa ccctagggaa agcccccgac ttaaacaaag catacaagtc 180 agttttatca ggcatgaatg cagccaaact tgatcctgat gatgtatgtt cctacttggc 240 agcagcaatg cagttctttg aggggacgtg tccggaggat tggaccagct atggaatctg 300 gattgcaaga aaaggagaca agatcacccc ggattctctg gtggaaataa agcgtactga 360 tgtagaagga aattgggctc tgacaggagg catggagctg acaagggacc ccactgtctc 420 tgaacatgcg tctttagtcg gccttctctt gagtctgtat aggttgagca aaatatcagg 480 acaaaacact ggtaactata aaacaaacat cgcagatagg atagagcaga ttttcgagac 540 cgcccctttt gttaaaatcg tggaacacca tactctaatg acaactcaca aaatgtgtgc 600 taattggagt actataccaa acttcagatt tttggccggg acctatgaca tgtttttctc 660 ccgggttgag catctatatt cagcaatcag agtgggcacg gttgtcactg cttatgaaga 720 ctgttcaggt ctggtatcgt ttactgggtt cataaagcag atcaatctca ccgcaagaga 780 agcaatacta tacttcttcc ataagaactt tgaggaagag ataagaagaa tgtttgagcc 840 gggacaggag acagccgttc ctcactccta cttcattcac ttccgttcac tgggcttgag 900 tgggaagtct ccttactcat cgaatgctgt tggtcatgtg ttcaatctca ttcactttgt 960 tggatgctat atgggtcaag tcagatccct aaatgcaaca gttattgcca catgtgctcc 1020 ccatgagatg tctgttctgg ggggttatct gggagaggaa ttctttggga gaggaacatt 1080 cgaaagaaga ttcttcagag atgagaagga acttcaagaa tacgaggcgg ctgaactgac 1140 aaagaccgac gtagctttgg cagatgatgg aactgtcaac tctgacgatg aagactactt 1200 ctccggtgaa accagaagtc cagaggctgt ttatactcga attatgatga atggaggccg 1260 actgaagaga tcgcatatac ggagatatgt ctcagtcagt tcaaatcatc aagctcgtcc 1320 aaactcattt gctgaatttc taaacaagac atattcgaat gactcataag gagttgaatg 1380 acattgtgcc agaaatctat tgattgtgta catccatcat gaaaaaaact aacacccctc 1440 ctttcggacc atctcaaata tgagcaagat tttcgtcaat ccgagtgcta tcagagccgg 1500 tctggccgat cttgagatgg ctgaagagac tgttgatctg atcaataaaa acatagaaga 1560 caatcaggct catctccagg gagaacccat agaagtggac aatctccctg aggacatgcg 1620 gcgacttcac ctggatgatg gaaaatcatc caactttggt gagatggcca aagcggggga 1680 aggcaagtat cgagaggact ttcagatgga tgaaggagag gatcctagcc tcctgttcca 1740 gtcatacctg gacaatgttg gaatccaaat agtcagacaa atgaggtcgg gagagagatt 1800 cctcaagata tggtcacaga ccgtagaaga gattatatcc tatgttgcgg tcaactttcc 1860 cagccctcca ggaaggtcct cagaggacaa atcaacccaa actactggtc gagagcctaa 1920 gaaagagaca acatccaccc cttctcagag agaaagcaaa tcttcgaaag ccaggatggc 1980 agctcaagct gcctctggcc ctccagccct tgaatggtct gctaccaatg aagaggatga 2040 tctatcagta gaggctgaga ttgctcacca gattgctgaa agcttctcaa agaagtacaa 2100 atttccctct cgatcctcag ggatattctt gtataatttt gagcagttga agatgaacct 2160 tgatgatata gttaaagagg caaaaaatgt gccaggcgtg acccgtttgg ctcatgacgg 2220 atccaaactc cctctaagat gtgtactggg atgggttgct ttggccaatt ccaagaaatt 2280 ccaattgttg gcagaggccg acaagctaag taaaatcatg caggatgatt tgaatcgcta 2340 tgcatcctgc taaccaaact tttaaatttt tgtccctcta gacaataaaa tctgagatgc 2400 cctagagtcg acatgaaaaa aacaggcaac accactgata aaatgaactt tctacgcaag 2460 atagtgaaaa attgtaggga tgaggacgct caaaagccct ctcctgtgtc cgcccctccg 2520 gatgacgatg acctgtggct tccaccccct gaatacgtcc cgctgaaaga actcacaagc 2580 aagaagaaca tgaggaactt ttgtatcaac ggggaggtta aagtgtgtag cccaaatggt 2640 tactcattca ggatcctgcg gcacattctg agatcattcg acgagatata ctctgggaat 2700 cataggatga ttgggctggt caaagtcgtc attggactag ctttgtcagg agctccagtc 2760 cctgagggca tgaactgggt atacaaactg aggagaaccc ttatcttcca gtgggctgat 2820 tccaggggtc ctcttgaagg agaagagttg gaatactcac aggagatcac ttgggatgat 2880 gatactgagt tcgttggatt gcaaataaga gtaagtgcaa gacaatgtca tatccagggc 2940 aaaatctggt gtatcaacat gaactcaaga gcatgtcagc tatggtctga catgtctctc 3000 cagacacaaa ggtccgaaga ggacaaagac tcctctctgc ttctagaata atcggattat 3060 atcccgcaag tttatcactt gtatacctct ggaggagaga acatacgagc ttaactccaa 3120 cccttgggag caatagaaca aaaacatgtt atggtgccat taaaccgctg cattttatca 3180 aagtcaagtt aattaccttt acattttgag cctcttggat gtgaaaaaaa ctattaacat 3240 ccctcaaaag acttaaggaa aaatgtttcc tcaggctctt ttgtttgtat cccttctggt 3300 tttttcattg tgtttcggga aattccctat ttacacaata ccagacaaac ttggtccttg 3360 gagcccgatt gacatacatc atctcagctg cccaaacaat ttggttgtag aggacgaagg 3420 atgcaccaac ctgtcagggt tttcctacat ggaacttaaa gttggatata tctcagccat 3480 aaaagtgaac gggtttactt gcacgggcgt tgtgacagag gcagaaacct acactaactt 3540 tgttggttat gtcaccacca cgttcaaaag aaagcatttc cgtccaacac cagatgcatg 3600 tagagccgca tacaactgga agatggccgg tgaccccaga tatgaggagt ctctacacaa 3660 tccgtaccct gactaccatt ggctacgaac tgtaaaaacc actaaggagt ctctcattgt 3720 catatcccca agtgtggcag atttggaccc atatgacaaa tcccttcact caagggtctt 3780 ccctagtgga aagtgctcag gaataacagt gtcttctacc tactgctcaa ctaaccacga 3840 ttacaccatt tggatgcccg agaatctgag actagggacg tcttgtgaca tttttattaa 3900 tagtagagga aagagagcat ccaaagggag taagacctgc ggctttgtag atgagagagg 3960 cctgtataag tctctaaaag gagcatgcaa actcaagtta tgtggagttc ttggactcag 4020 acttatggat ggaacatggg tcgcgatgca aacatcagat gagaccaaat ggtgccctcc 4080 tgatcagttg gtgaatctgc acgactttcg ctcggatgaa attgagcatc ttgttgtaga 4140 ggagttggtc aagaagaggg aggagtgtct ggatgcacta gagtccatca tgaccaccaa 4200 gtcagtgagt ttcagacgtc tcagtcattt aagaaaactt gttcctgggt ttggaaaagc 4260 atatactata ttcaacaaga ccttgatgga ggcagatgct cactacaaat cagttcggac 4320 ttggaacgag atcatcccct caaaagggtg cttaagagtt ggagggagat gtcaccctca 4380 tgtgaacggg gtgtttttca atggcataat attagggcct gatggccatg ttctaatccc 4440 agagatgcag tcatccctcc tccagcaaca tatggagttg ttggaatcct cagttattcc 4500 cctgatgcac cccctggcag acccgtccac agttttcaag gaaggtgatg aggctgagga 4560 ctttgttgaa gttcaccttc ccgatgtgca caaacaggtc tcaggggtag acctgggcct 4620 cccaaactgg gggaagtatg tattgctgag tgcaggggcc ctgattgcct tgatgttgat 4680 aattttccta cttacatgtt gtagaagagt cagtcgacca gaatctacgc agcacagtct 4740 tggagggaaa gggaggaagg tgtcgatcac tccccaaagc gggaaggtta tatcttcatg 4800 ggagtcatat aagagtgggg gtgaaactag actgtaaagg ctggtcatcc ttttgacgct 4860 tcaagtctta aaggtcacat ccccctgggg ttggggggaa tctctgggtc caatagtcct 4920 ccttgaactc catgcaacag ggtagattta agagtcatga gactttcatt aatcatctcg 4980 gttgatcaaa ctaggtcatg tagattctca taatacggga aatcttctag cagtttcagt 5040 gaccaatggt gctttcattc tccaggaact ggtaccaaag gttgtagacg ggccgagagg 5100 tatttcggac gactccgcgc ctgggcacgg acagaagtca tagtgagtct cgtgatagca 5160 gactcagcat gagtttattg agaaaggcaa tctgcctccc atgaaggaca taagcaatag 5220 ctcacaatca tcttgcatct cagcaaaata tgcataatta caaagggctg ggccatctaa 5280 gcttttcagt cgagaaaaaa actgtagatc aaaagagcaa ctggcaacac ttctcatcct 5340 gaaccctata tcaagatgct agatccagga gaggtctatg atgaccccag tgatccagtc 5400 gagtcagagg ctgaacccag aggggccccc actgtcccta acatcttgag aaactctgac 5460 tacaatctca actccccttt gatagaagac cctgcgagac taatgttaga atggttgaaa 5520 acagggaata gaccttatcg gatgactccg acagacaatt gttccaggtc ttacaaagtt 5580 ttgaaagatt atttcaagaa ggtggatctg ggttctctga aagtgggcgg aactgctgca 5640 cagtcaatga tttctctttg gttatatggt gcccactctg aatcaaacag gagccggaga 5700 tgtataacag acttggctca tttctattca aagtcatccc ccatagagaa gctgttaaat 5760 tgtacgctag gaaatagagg gctgaaaatc ccccccgagg gggtgttaag ttctcttgag 5820 agggtcgatt acgataaggc atttgggagg tatcttgcca acacgtattc ctcttatttg 5880 tttttccatg taatcaccct atacatgaat gccctggact gggacgaaga aaaaaccatc 5940 ttggcattat ggagagattt aacctcagtg gacatcggga aggacttggt caagttcaaa 6000 gatcaaatat ggggactgct gattgtaacg aaggactttg tttactccca gagttctaac 6060 tgtctttttg acagaaacta tacacttatg ctaaaagatc tttttttgtc tcgcttcaac 6120 tccttaatga tcttgctctc tccccccgag ccccgatact cagacgactt gatatctcag 6180 ctgtgccagt tatacatcgc tggggatcag gtcttgtcca tgtgtggaaa ctccggatat 6240 gaagtcatta aaatattgga gccatatgtt gtaaatagtt tagtccagag agcagagaag 6300 tttaggcctc tcattcattc cttgggagac tttcctgtat ttataaaaga caaggtgagt 6360 cagcttgaag ggactttcgg tcccagtgcc aagaagtttt ttagggttct ggatcagttc 6420 gacaacatac atgatttggt ttttgtgtat ggctgttaca ggcattgggg gcatccctat 6480 atagattatc gaaagggtct atctaaacta tatgatcaag ttcacattaa gaaagtgata 6540 gacaagtcct accaagagtg tttggcaagc gacctagcca ggaggatcct cagatgggga 6600 tttgataaat actccaagtg gtatctggat tcacgattcc ttgctcgaga ccaccccttg 6660 actccttata tcaaaaccca gacatggcca cccaaacata tagtagactt agtgggggat 6720 acctggcaca agctcccgat cacgcaaatc tttgagattc ctgaatcaat ggacccgtca 6780 gaaatactgg atgacaaatc acattctttc accagaacaa gactagcttc ttggctgtca 6840 gagaaccgag gtgggcctgt tcccagtgag aaagttatta tcacagcctt gtctaagccg 6900 cctgtcaatc cccgagagtt tttaaaatct atagacctcg gaggattgcc agatgaggac 6960 ttaataattg gcctcaagcc aaaggaacga gaattgaaga ttgagggtcg attctttgct 7020 ctaatgtcat ggaatctaag attgtatttc gttatcaccg aaaagcttct ggctaattac 7080 atcttgccac tttttgacgc actgaccatg acagacaacc tgaacaaggt gtttaagaag 7140 ctgatcgacc gggtcactgg gcaagggctt ttggactatt cgagggttac atatgcattt 7200 catctggact atgaaaagtg gaataatcat caaagattag agtcaacaga ggatgtgttc 7260 tctgtcctgg atcaggtatt tggattgaag agagtgtttt ctagaacaca tgagtttttt 7320 cagaagtcat ggatctatta ttcggacaga tcagacctca tcgggttatg ggaggatcaa 7380 atatactgct tggatatgtc caacggccca acctgctgga atggccagga cggcgggcta 7440 gagggcttac ggcagaaggg ctggagtcta gtcagcttat tgatgataga tagagaatct 7500 caaaccagga acacaagaac caaaatacta gctcaaggag acaaccaggt tctatgtccg 7560 acatatatgt tgtcgccagg gctgtctaga gagggactcc tctatgagtt agagagcata 7620 tcaaggaatg cactttcaat ataccgagcc atcgaagaag gggcatccaa gctaggtctg 7680 atcatcaaga aggaagagac catgtgtagt tatgactttc tcatttatgg aaaaactccc 7740 ttgtttcgag gtaacatatt ggtgcctgaa tccaaaagat gggccagagt ctcgtgcatc 7800 tctaacgacc aaatagtcaa tcttgccaat ataatgtcga cagtgtctac caatgcgcta 7860 actgtggcac aacactctca gtctttgatc aagccgatga gggactttct gctcatgtca 7920 gtacaggcag tctttcacta cctgttattt agcccaatct tgaagggccg agtttacaag 7980 attctgagtg cagaagggga gagctttctc ctagccatgt cgaggataat ctatctagac 8040 ccttctttag gaggggtgtc tgggatgtct cttggaaggt ttcatatacg tcaattctca 8100 gaccctgtct ctgaagggtt gtccttctgg agagagatct ggttaagctc ccacgagtcc 8160 tggattcacg cgttgtgtca agaggctggg aacccagatc ttggagagag aacactcgag 8220 agcttcactc gccttctaga agatcctacc accttaaata ttaaaggagg tgccagtcct 8280 accattctac tcaaggatgc aatcagaaag gctctgtatg acgaagtgga caaggtggaa 8340 aactcagagt ttcgagaggc gatcttgttg tccaagaccc atagagataa cttcatactc 8400 ttcttaaaat ctgttgagcc tctgtttcct cgatttctca gtgagctctt cagttcgtct 8460 ttcttgggaa tccccgagtc aatcattgga ctgatacaaa actcccggac gataagaagg 8520 cagtttagaa agagtctctc aagaacttta gaagaatcct tctacaactc agagattcat 8580 gggattaatc ggatgaccca gacacctcaa agggtcggga gggtgtggcc ttgctcttca 8640 gagagggcag acctacttag ggagatctct tggggaagaa aagtggtagg cacgacagtt 8700 cctcaccctt ctgagatgtt ggggttactt ccaaaatctt ccatctcttg cacttgtgga 8760 gcaacagggg gaggcaatcc tagagtttct gtatcagtac tcccgtcctt tgatcagtca 8820 tttttttcaa gaggtcccct aaagggatac ttgggctcat ccacctctat gtcaacccaa 8880 ctattccatg catgggaaaa agtcactaat gttcatgtgg tgaaaagggc tctatcttta 8940 aaagaatcta taaactggtt cattactaga aattccaact tggctcaaac cctaattagg 9000 aatattatgt ctctgacagg ccctgatttc cctctagagg aggcccctgt ttttaaaagg 9060 acagggtcag ccttgcatag gttcaagtct gccagataca gcgaaggagg gtactcttct 9120 gtttgcccga acctcctctc tcatatctct gttagtacag acactatgtc tgacttgact 9180 caagacggga agaactacga cttcatgttc cagccattga tgctttatgc gcagacgtgg 9240 acatcagagc tggtacagag agacacaagg ctgagggact ctacgtttca ttggcacctc 9300 cggtgtaata ggtgtgtaag gcccatcgac gatataacac tggagacttc tcagatcttc 9360 gagttcccgg atgtatcaaa aagaatatcc agaatggtct ctggggctgt gcctcacttc 9420 cagaaacttc ctgatatccg tctgagaccc ggtgattttg aatctctaag tagtagagaa 9480 aagtctcgcc atatagggtc ggctcaggga ctcttatact caatcttagt ggcaattcac 9540 gactcaggat acaatgatgg aaccatcttc cctgtcaaca tttacggcaa agtctctcct 9600 agagattatt tgagagggct cgcgagagga gtcttgatag gatcctcgat ttgcttcttg 9660 acaagaatga caaatatcaa catcaataga cctctagagt tgatctcagg agtaatctca 9720 tatatcctcc tgaggttaga taatcacccc tctttgtaca taatgctcag agaaccgtct 9780 cttagaggag aaatattctc tatccctcag aaaatccccg ccgcttatcc aaccactatg 9840 aaagaaggca acagatcgat tttgtgttat ctccaacatg tgctacgcta tgagcgagag 9900 gtgattacag cgtctccaga gaatgactgg ctgtggatct tctctgactt tagaagtgcc 9960 aaaatgacgt acctgaccct cattacttac cagtctcatc tcctactcca aagggttgag 10020 agaaatttgt ctaagagtat gagagctaac ctgcgacaaa tgagttcttt gatgaggcaa 10080 gtgctgggtg ggcacggaga agatacttta gagtccgacg acgacattca acgattacta 10140 aaagactctt tgcggagaac aaggtgggtg gatcaagagg tgcgtcatgc agctagaacc 10200 atgactggag attatagccc ctacaagaaa gtgtctcgta aagcaggatg ttcagaatgg 10260 gtctgctctg ctcaacaggt tgcagtctcc acctcagcaa acccagcccc tgtctcagag 10320 cttgacataa gggccctctc taagaggttt caaaaccctc tgatctcggg cctgagagtg 10380 gttcagtggg caactggcgc ccattataaa cttaagccca ttctggatga tcttaacgtt 10440 ttcccatccc tctgtcttgt agttggggac gggtcagggg ggatatcaag ggcagttctt 10500 aacatgttcc cagatgccaa gcttgtgttc aacagcctct tggaggtgaa tgatctgatg 10560 gcttccggaa cacatccatt gcctccttca gcaatcatga gtggtggaga tgacatcgtt 10620 tccagagtga tagattttga ctcaatctgg gaaaaaccgt ccgacctgag gaacttggcc 10680 acctggagat acttccagtc agtccaaaaa caggtcaaca tgtcttatga cctcatcatt 10740 tgtgatgcag aagtcactga cattgcatct atcaaccgga taaccctgtt aatgtctgat 10800 ttcgcgttgt ctatagatgg accactttat ttggtcttca aaacttacgg gactatgctt 10860 gtaaacccag actataaggc tattcaacac ctgtcaagag cgttcccctc agtcactggg 10920 tttataaccc aagtgacctc gtccttttca tcagagctat atctccgatt ctccaaacga 10980 ggaaagtttt tcagagatcc cgagtacttg acctcttcca cccttcggga aatgagcctt 11040 gtattgttca attgcagcag ccccaagagt gagatgcaaa gagctcgttc cttaaactat 11100 caagatcttg taaggggttt ccctgaagaa atcatatcaa atccttacaa tgagatgatc 11160 ataactctga ttgacagtga tgtagaatct ttcctagtcc acaagatggt ggatgatctt 11220 gagttacaga ggggaaccct gtctaaagtg gctatcatta tatccatcat gatagttttt 11280 tccaacagag tcttcaacgt ctccaaaccc ttgactgacc ccttgttcta tccaccgtcc 11340 gatcccaaaa tcctgaggca cttcaacatc tgttgcagta ctatgatgta tctatccacc 11400 gctttaggcg atgtccttag cttcgcaaga cttcatgacc tgtataaccg acctataact 11460 tattacttca gaaagcaagt cattcgaggg aatatttatc tatcttggag ttggtctgac 11520 gacgcctcag tgttcaagag ggtagcctgt aattccagtt tgagtctatc gtctcattgg 11580 atcaggttga tttacaagat agtgaagact actagactcg ttggcagcat tgaggactta 11640 tctggagagg tggaaagaca ccttcacggg tacaacaggt ggatcaccct cgaggatatc 11700 agatcgagat catctctact agactacagc tgcttgtaaa ccgagtactc ccagaagctt 11760 gtacacgcta agactcttgt gcggtgtgtc ttgaaaaaa 11799 // ID MK598340; SV 1; linear; viral cRNA; STD; VRL; 11798 BP. XX AC MK598340; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Rabies lyssavirus isolate 12496, complete genome. XX KW . XX OS Rabies lyssavirus OC Viruses; Riboviria; Negarnaviricota; Haploviricotina; Monjiviricetes; OC Mononegavirales; Rhabdoviridae; Lyssavirus. XX RN [1] RP 1-11798 RA Forro B., Banyai K.; RT ; RL Submitted (05-MAR-2019) to the INSDC. RL New Pathogen Discovery, Institute for Veterinary Medical Research, Hungaria RL krt. 21., Budapest H-1143, Hungary XX DR MD5; 4900dbdb8fe4eba7e335e55ae700b8f5. XX CC ##Assembly-Data-START## CC Assembly Method :: Geneious v. 9.1.8 CC Sequencing Technology :: IonTorrent CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..11798 FT /organism="Rabies lyssavirus" FT /host="red fox" FT /isolate="12496" FT /mol_type="viral cRNA" FT /country="Hungary" FT /collection_date="2007" FT /db_xref="taxon:11292" FT gene 17..1369 FT /gene="N" FT CDS 17..1369 FT /codon_start=1 FT /gene="N" FT /product="nucleoprotein" FT /protein_id="QDZ26172.1" FT /translation="MDADKIVFKVNNQVISLKPEIIVDQYEYKYPAIKDLKKPCITLGK FT APDLNKAYKSVLSGMNAAKLDPDDVCSYLAAAMQFFEGTCPEDWTSYGILIARKGDKIT FT PDSLVEIKRTDVEGNWALTGGMELTRDPTVSEHASLVGLLLSLYRLSKISGQNTGNYKT FT NIADRIEQIFETAPFVKIVEHHTLMTTHKMCANWSTIPNFRFLAGTYDMFFSRIEHLYS FT AIRVGTVVTAYEDCSGLVSFTGFIKQINLTAREAILYFFHKNFEEEIRRMFEPGQETAV FT PHSYFIHFRSLGLSGKSPYSSNAVGHVFNLIHFVGCYMGQVRSLNATVIAACAPHEMSV FT LGGYLGEEFFGKGTFERRFFRDEKELQEYEAAELTKTDVALADDGTVNSDDEDYFSGET FT RSPEAVYTRIMMNGGRLKRSHIRRYVSVSSNHQARPNSFAEFLNKTYSNDS" FT gene 1460..2353 FT /gene="P" FT CDS 1460..2353 FT /codon_start=1 FT /gene="P" FT /product="phosphoprotein" FT /protein_id="QDZ26173.1" FT /translation="MSKIFVNPSAIRAGLADLEMAEETVDLINKNIEDNQAHLQGEPIE FT VDNLPEDMRRLHLDDGKSSNLGEMAKAGEGKYREDFQMDEGEDPSLLFQSYLDNVGVQI FT VRQMRSGERFLKIWSQTVEEIISYVTVNFPNPPGRSSEDKSTQTTGREPKKETTSTPSQ FT RESQSSKARMAAQAASGPPALEWSATNEEDDLSVEAEIAHQIAESFSKKYKFPSRSSGI FT FLYNFEQLKMNLDDIVKEAKNVPGVTRLAHDGSKLPLRCVLGWVALANSKKFQLLVEAD FT KLSKIMQDDLNRYASC" FT gene 2442..3050 FT /gene="M" FT CDS 2442..3050 FT /codon_start=1 FT /gene="M" FT /product="matrix protein" FT /protein_id="QDZ26174.1" FT /translation="MNFLRKIVKNCRDEDAQKPSPVSAPPDDDDLWLPPPEYVPLKELT FT SKKNMRNFCINGEVKVCSPNGYSFRILRHILRSFDEIYSGNHRMIGLVKVVIGLALSGA FT PVPEGMNWVYKLRRTLIFQWADSRGPLEGEELEYSQEITWDDDTEFVGLQIRVSARQCH FT IQGKIWCINMNSRACQLWSDMSLQTQRSEEDKDSSLLLE" FT gene 3262..4836 FT /gene="G" FT CDS 3262..4836 FT /codon_start=1 FT /gene="G" FT /product="glycoprotein" FT /protein_id="QDZ26175.1" FT /translation="MFPQALLFVSLLVFSLCFGKFPIYTIPDKLGPWSPIDIHHLSCPN FT NLVVEDEGCTNLSGFSYMELKVGYISAIKVNGFTCTGVVTEAETYTNFVGYVTTTFKRK FT HFRPTPDACRAAYNWKMAGDPRYEESLHNPYPDYHWLRTVKTTKESLIVISPSVADLDP FT YDKSLHSRVFPSGKCSGITVSSTYCSTNHDYTIWMPENLRLGTSCDIFINSRGKRASKG FT SKTCGFVDERGLYKSLKGACKLKLCGVLGLRLMDGTWVAMQTSDETKWCPPDQLVNLHD FT FRSDEIEHLVVEELVKKREECLDALESIMTTKSVSFRRLSHLRKLVPGFGKAYTIFNKT FT LMEADAHYKSVRTWNEIIPSKGCLRVGGRCHPHVNGVFFNGIILGPDGHVLIPEMQSSL FT LQQHMELLESSVIPLMHPLADPSTVFKEGDEAEDFVEVHLPDVHKQVSGVDLGLPNWGK FT YVLLSAGALIALMLIIFLLTCCRRVSRPESTQHSLGGKGRKVSITPQSGKVISSWESYK FT SGGETRL" FT gene 5355..11738 FT /gene="L" FT CDS 5355..11738 FT /codon_start=1 FT /gene="L" FT /product="RNA dependent RNA polymerase" FT /protein_id="QDZ26176.1" FT /translation="MLDPGEVYDDPSDPVESEAEPRGAPTVPNILRNSDYNLNSPLIED FT PARLMLEWLKTGNRPYRMTPTDNCSRSYKVLKDYFKKVDLGSLKVGGTAAQSMISLWLY FT GAHSESNRSRRCITDLAHFYSKSSPIEKLLNCTLGNRGLKIPPEGVLSSLERVDYDKAF FT GRYLANTYSSYLFFHVITLYMNALDWDEEKTILALWRDLTSVDIGKDLVKFKDQIWGLL FT IVTKDFVYSQSSNCLFDRNYTLMLKDLFLSRFNSLMILLSPPEPRYSDDLISQLCQLYI FT AGDQVLSMCGNSGYEVIKILEPYVVNSLVQRAEKFRPLIHSLGDFPVFIKDKVSQLEGT FT FGPSAKKFFRVLDQFDNIHDLVFVYGCYRHWGHPYIDYRKGLSKLYDQVHIKKVIDKSY FT QECLASDLARRILRWGFDKYSKWYLDSRFLARDHPLTPYIKTQTWPPKHIVDLVGDTWH FT KLPITQIFEIPESMDPSEILDDKSHSFTRTRLASWLSENRGGPVPSEKVIITALSKPPV FT NPREFLKSIDLGGLPDEDLIIGLKPKERELKIEGRFFALMSWNLRLYFVITEKLLANYI FT LPLFDALTMTDNLNKVFKKLIDRVTGQGLLDYSRVTYAFHLDYEKWNNHQRLESTEDVF FT SVLDQVFGLKRVFSRTHEFFQKSWIYYSDRSDLIGLWEDQIYCLDMSNGPTCWNGQDGG FT LEGLRQKGWSLVSLLMIDRESQTRNTRTKILAQGDNQVLCPTYMLSPGLSREGLLYELE FT SISRNALSIYRAIEEGASKLGLIIKKEETMCSYDFLIYGKTPLFRGNILVPESKRWARV FT SCISNDQIVNLANIMSTVSTNALTVAQHSQSLIKPMRDFLLMSVQAVFHYLLFSPILKG FT RVYKILSAEGESFLLAMSRIIYLDPSLGGVSGMSLGRFHIRQFSDPVSEGLSFWREIWL FT SSHESWIHALCQEAGNPDLGERTLESFTRLLEDPTTLNIKGGASPTILLKDAIRKALYD FT EVDKVENSEFREAILLSKTHRDNFILFLKSVEPLFPRFLSELFSSSFLGIPESIIGLIQ FT NSRTIRRQFRKSLSRTLEESFYNSEIHGINRMTQTPQRVGRVWPCSSERADLLREISWG FT RKVVGTTVPHPSEMLGLLPKSSISCTCGATGGGNPRVSVSVLPSFDQSFFSRGPLKGYL FT GSSTSMSTQLFHAWEKVTNVHVVKRALSLKESINWFITRNSNLAQTLIRNIMSLTGPDF FT PLEEAPVFKRTGSALHRFKSARYSEGGYSSVCPNLLSHISVSTDTMSDLTQDGKNYDFM FT FQPLMLYAQTWTSELVQRDTRLRDSTFHWHLRCNRCVRPIDDITLETSQIFEFPDVSKR FT ISRMVSGAVPHFQKLPDIRLRPGDFESLSSREKSRHIGSAQGLLYSILVAIHDSGYNDG FT TIFPVNIYGKVSPRDYLRGLARGVLIGSSICFLTRMTNININRPLELISGVISYILLRL FT DNHPSLYIMLREPSLRGEIFSIPQKIPAAYPTTMKEGNRSILCYLQHVLRYEREVITAS FT PENDWLWIFSDFRSAKMTYLTLITYQSHLLLQRVERNLSKSMRANLRQMSSLMRQVLGG FT HGEDTLESDDDIQRLLKDSLRRTRWVDQEVRHAARTMTGDYSPYKKVSRKAGCSEWVCS FT AQQVAVSTSANPAPVSELDIRALSKRFQNPLISGLRVVQWATGAHYKLKPILDDLNVFP FT SLCLVVGDGSGGISRAVLNMFPDAKLVFNSLLEVNDLMASGTHPLPPSAIMSGGDDIVS FT RVIDFDSIWEKPSDLRNLATWRYFQSVQKQVNMSYDLIICDAEVTDIASINRITLLMSD FT FALSIDGPLYLVFKTYGTMLVNPDYKAIQHLSRAFPSVTGFITQVTSSFSSELYLRFSK FT RGKFFRDPEYLTSSTLREMSLVLFNCSSPKSEMQRARSLNYQDLVRGFPEEIISNPYNE FT MIITLIDSDVESFLVHKMVDDLELQRGTLSKVAIIISIMIVFSNRVFNVSKPLTDPLFY FT PPSDPKILRHFNICCSTMMYLSTALGDVLSFARLHDLYNRPITYYFRKQVIRGNIYLSW FT SWSDDASVFKRVACNSSLSLSSHWIRLIYKIVKTTRLVGSIEDLSGEVERHLHGYNRWI FT TLEDIRSRSSLLDYSCL" XX SQ Sequence 11798 BP; 3359 A; 2595 C; 2724 G; 3120 T; 0 other; atgtaacacc cctacaatgg atgccgacaa gattgtattc aaagtcaaca atcaggtgat 60 ttctttgaag cctgagatta tcgtggatca atatgagtac aagtaccctg ctatcaaaga 120 cttgaaaaag ccctgtataa ccctagggaa agcccccgac ttaaacaaag catacaagtc 180 agttttatca ggcatgaatg cagccaaact tgatcctgat gatgtatgtt cctacttggc 240 agcagcaatg cagttctttg aggggacgtg tccagaggac tggaccagct atggaatctt 300 gattgcacga aaaggagaca agatcacccc ggattctctg gtggaaataa agcgtactga 360 tgtagaagga aattgggctc tgacaggagg catggagctg acaagggacc ccactgtctc 420 tgaacatgcg tctttagtcg gtcttctctt gagtctgtat aggttgagca aaatatcagg 480 acaaaacact ggtaactata aaacaaacat cgcagatagg atagagcaga ttttcgagac 540 cgcccctttt gttaaaatcg tggaacacca tactctaatg acaactcaca aaatgtgtgc 600 taattggagt actataccga atttcagatt tttggccggg acctatgaca tgtttttctc 660 ccggattgag catctatatt cagcaatcag agtgggcacg gttgtcactg cttatgaaga 720 ctgttcaggt ctggtatcgt ttactgggtt cataaagcag atcaatctca ccgcaagaga 780 agcaatacta tacttcttcc acaagaactt tgaggaagag ataagaagaa tgttcgagcc 840 agggcaggag acagctgttc ctcactccta tttcattcac ttccgttcac taggcttgag 900 tgggaagtct ccttattcat cgaatgccgt tggtcatgtg ttcaatctca ttcactttgt 960 tggatgctat atgggtcaag tcagatccct aaatgcaaca gttattgccg catgtgctcc 1020 tcatgagatg tctgttctag ggggctatct gggagaggaa ttcttcggga aaggaacatt 1080 cgaaagaaga ttcttcagag atgagaagga acttcaagaa tacgaggcgg ctgaactgac 1140 aaagaccgac gtagcattgg cagatgatgg aactgtcaac tctgacgatg aagactactt 1200 ctccggtgaa accagaagtc cagaagctgt ttatactcga atcatgatga atggaggtcg 1260 actaaagaga tcgcatatac ggagatatgt ctcagtcagt tcaaatcatc aagctcgtcc 1320 aaactcattt gctgagtttc taaacaagac atattcgaac gactcataag gagttgaata 1380 acagtgtgcc agaaatctat cgattgtgta tatccatcat gaaaaaaact aacacccctc 1440 ctttcgaacc atcccaaata tgagcaagat tttcgtcaat ccgagtgcta tcagagccgg 1500 tctggccgat cttgagatgg ctgaagagac tgttgatctg atcaataaaa acatagaaga 1560 caatcaggct catctccagg gggaacccat agaagtggac aatctccctg aggacatgcg 1620 gcgacttcac ctggatgatg gaaaatcgtc caacctcggt gagatggcca aagcggggga 1680 aggcaagtat cgagaggact ttcagatgga tgaaggagag gatcctagcc tcctgttcca 1740 gtcatacctg gacaatgttg gagtccaaat agtcagacaa atgaggtcag gagagagatt 1800 cctcaagata tggtcacaga ccgtagaaga gattatatcc tatgtcacgg tcaactttcc 1860 caaccctcca ggaaggtcct cagaggacaa atcaacccaa actactggtc gagagcccaa 1920 gaaggagaca acatccactc cttctcagag agaaagccaa tcttcgaaag ccaggatggc 1980 ggctcaagct gcctctggcc ctccagccct tgaatggtct gctaccaatg aggaggatga 2040 tctatcagta gaggctgaga tcgctcacca gattgctgaa agcttctcca agaagtacaa 2100 gtttccctct cgatcctcag ggatattctt gtataatttt gagcagttga agatgaacct 2160 tgatgatata gttaaggagg caaaaaatgt gccaggcgtg acccgtttag ctcatgacgg 2220 atccaaactc cctctaagat gtgtactggg atgggttgct ttggccaatt ccaagaaatt 2280 ccaattgtta gtagaggccg acaagctaag taaaatcatg caggatgatt tgaatcgcta 2340 tgcatcctgc taaccgaact tttaaattcg gtccctctag ataataaaat ctgagatgtc 2400 ctagagtcga catgaaaaaa acaggcaaca ccactgataa aatgaacttt ctacgcaaga 2460 tagtgaaaaa ttgtagggat gaggacgctc aaaagccctc tcctgtgtcc gcccctccgg 2520 atgacgatga cctgtggctt ccaccccctg aatacgtccc gctgaaagaa ctcacaagca 2580 agaagaacat gaggaacttt tgtatcaacg gggaggttaa agtgtgtagc ccaaatggtt 2640 actcattcag gatcctgcgg cacattctga gatcattcga cgagatatac tctgggaatc 2700 ataggatgat tgggctggtc aaagtcgtca ttggactagc tttgtcagga gctccagtcc 2760 ctgagggcat gaactgggta tacaaactga ggagaaccct tatcttccag tgggctgatt 2820 ccaggggtcc tcttgaagga gaagagttgg aatactcaca ggagatcact tgggatgatg 2880 atactgagtt cgttggattg caaataagag taagtgcaag acaatgtcat atccagggca 2940 aaatctggtg tatcaacatg aactcaagag catgtcagct atggtctgac atgtctctcc 3000 agacacaaag gtccgaagag gacaaagact cctctctgct tctagaataa tcggattata 3060 tcccgcaagt ttatcacttg tatacctctg gaggagagaa catacgagct taactccaac 3120 ccttgggagc aatagaacaa aaacatgtta tggtgccatt aaaccgctgc attttatcaa 3180 agtcaagtta attaccttta cattttgagc ctcttggatg tgaaaaaaac tattaacatc 3240 cctcaaaaga cttaaggaaa aatgtttcct caggctcttt tgtttgtatc ccttctggtt 3300 ttttcattgt gtttcgggaa attccctatt tacacaatac cagacaaact tggtccttgg 3360 agcccgattg acatacatca tctcagctgc ccaaacaatt tggttgtaga ggacgaagga 3420 tgcaccaacc tgtcagggtt ttcctacatg gaacttaaag ttggatatat ctcagccata 3480 aaagtgaacg ggtttacttg cacgggcgtt gtgacagagg cagaaaccta cactaacttt 3540 gttggttatg tcaccaccac gttcaaaaga aagcatttcc gtccaacacc agatgcatgt 3600 agagccgcat acaactggaa gatggccggt gaccccagat atgaggagtc tctacacaat 3660 ccgtaccctg actaccattg gctacgaact gtaaaaacca ctaaggagtc tctcattgtc 3720 atatccccaa gtgtggcaga tttggaccca tatgacaaat cccttcactc aagggtcttc 3780 cctagtggaa agtgctcagg aataacagtg tcttctacct actgctcaac taaccacgat 3840 tacaccattt ggatgcccga gaatctgaga ctagggacgt cttgtgacat ttttattaat 3900 agtagaggaa agagagcatc caaagggagt aagacctgcg gctttgtaga tgagagaggc 3960 ctgtataagt ctctaaaagg agcatgcaaa ctcaagttat gtggagttct tggactcaga 4020 cttatggatg gaacatgggt cgcgatgcaa acatcagatg agaccaaatg gtgccctcct 4080 gatcagttgg tgaatctgca cgactttcgc tcggatgaaa ttgagcatct tgttgtagag 4140 gagttggtca agaagaggga ggagtgtctg gatgcactag agtccatcat gaccaccaag 4200 tcagtgagtt tcagacgtct cagtcattta agaaaacttg ttcctgggtt tggaaaagca 4260 tatactatat tcaacaagac cttgatggag gcagatgctc actacaaatc agttcggact 4320 tggaacgaga tcatcccctc aaaagggtgc ttaagagttg gagggagatg tcaccctcat 4380 gtgaacgggg tgtttttcaa tggcataata ttagggcctg atggccatgt tctaatccca 4440 gagatgcagt catccctcct ccagcaacat atggagttgt tggaatcctc agttattccc 4500 ctgatgcacc ccctggcaga cccgtccaca gttttcaagg aaggtgatga ggctgaggac 4560 tttgttgaag ttcaccttcc cgatgtgcac aaacaggtct caggggtaga cctgggcctc 4620 ccaaactggg ggaagtatgt attgctgagt gcaggggccc tgattgcctt gatgttgata 4680 attttcctac ttacatgttg tagaagagtc agtcgaccag aatctacgca gcacagtctt 4740 ggagggaaag ggaggaaggt gtcgatcact ccccaaagcg ggaaggttat atcttcatgg 4800 gagtcatata agagtggggg tgaaactaga ctgtaaaggc tggtcatcct tttgacgctt 4860 caagtcttaa aggtcacatc cccctggggt tggggggaat ctctgggtcc aatagtcctc 4920 cttgaactcc atgcaacagg gtagatttaa gagtcatgag actttcatta atcatctcgg 4980 ttgatcaaac taggtcatgt agattctcat aatacgggaa atcttctagc agtttcagtg 5040 accaatggtg ctttcattct ccaggaactg gtaccaaagg ttgtagacgg gccgagaggt 5100 atttcggacg actccgcgcc tgggcacgga cagaagtcat agtgagtctc gtgatagcag 5160 actcagcatg agtttattga gaaaggcaat ctgcctccca tgaaggacat aagcaatagc 5220 tcacaatcat cttgcatctc agcaaaatat gcataattac aaagggctgg gtcatctaag 5280 cttttcagtc gagaaaaaaa ctgtagatca aaagagcaac tggcaacact tctcatcctg 5340 aaccctatat caagatgcta gatccaggag aggtctatga tgaccccagt gatccagtcg 5400 agtcagaggc tgaacccaga ggggccccca ctgtccctaa catcttgaga aactctgact 5460 acaatctcaa ctcccctttg atagaagacc ctgcgagact aatgttagaa tggttgaaaa 5520 cagggaatag accttatcgg atgactccga cagacaattg ttccaggtct tacaaagttt 5580 tgaaagatta tttcaagaag gtggatctgg gttctctgaa agtgggcgga actgctgcac 5640 agtcaatgat ttctctttgg ttatatggtg cccactctga atcaaacagg agccggagat 5700 gtataacaga cttggctcat ttctattcaa agtcatcccc catagagaag ctgttaaatt 5760 gtacgctagg aaatagaggg ctgaaaatcc cccccgaggg ggtgttaagt tctcttgaga 5820 gggtcgatta cgataaggca tttgggaggt atcttgccaa cacgtattcc tcttatttgt 5880 ttttccatgt aatcacccta tacatgaatg ccctggactg ggacgaagaa aaaaccatct 5940 tggcattatg gagagattta acctcagtgg acatcgggaa ggacttggtc aagttcaaag 6000 atcaaatatg gggactgctg attgtaacga aggactttgt ttactcccag agttctaact 6060 gtctttttga cagaaactat acacttatgc taaaagatct ttttttgtct cgcttcaact 6120 ccttaatgat cttgctctct ccccccgagc cccgatactc agacgacttg atatctcagc 6180 tgtgccagtt atacatcgct ggggatcagg tcttgtccat gtgtggaaac tccggatatg 6240 aagtcattaa aatattggag ccatatgttg taaatagttt agtccagaga gcagagaagt 6300 ttaggcctct cattcattcc ttgggagact ttcctgtatt tataaaagac aaggtgagtc 6360 agcttgaagg gactttcggt cccagtgcca agaagttttt tagggttctg gatcagttcg 6420 acaacataca tgatttggtt tttgtgtatg gctgttacag gcattggggg catccctata 6480 tagattatcg aaagggtcta tctaaactat atgatcaagt tcacattaag aaagtgatag 6540 acaagtccta ccaagagtgt ttggcaagcg acctagccag gaggatcctc agatggggat 6600 ttgataaata ctccaagtgg tatctggatt cacgattcct tgctcgagac caccccttga 6660 ctccttatat caaaacccag acatggccac ccaaacatat agtagactta gtgggggata 6720 cctggcacaa gctcccgatc acgcaaatct ttgagattcc tgaatcaatg gacccgtcag 6780 aaatactgga tgacaaatca cattctttca ccagaacaag actagcttct tggctgtcag 6840 agaaccgagg tgggcctgtt cccagtgaga aagttattat cacagccttg tctaagccgc 6900 ctgtcaatcc ccgagagttt ttaaaatcta tagacctcgg aggattgcca gatgaggact 6960 taataattgg cctcaagcca aaggaacgag aattgaagat tgagggtcga ttctttgctc 7020 taatgtcatg gaatctaaga ttgtatttcg ttatcaccga aaagcttctg gctaattaca 7080 tcttgccact ttttgacgca ctgaccatga cagacaacct gaacaaggtg tttaagaagc 7140 tgatcgaccg ggtcactggg caagggcttt tggactattc gagggttaca tatgcatttc 7200 atctggacta tgaaaagtgg aataatcatc aaagattaga gtcaacagag gatgtgttct 7260 ctgtcctgga tcaggtattt ggattgaaga gagtgttttc tagaacacat gagttttttc 7320 agaagtcatg gatctattat tcagacagat cagacctcat cgggttatgg gaggatcaaa 7380 tatactgctt ggatatgtcc aacggcccaa cctgctggaa tggccaggac ggcgggctag 7440 agggcttacg gcagaagggc tggagtctag tcagcttatt gatgatagat agagaatctc 7500 aaaccaggaa cacaagaacc aaaatactag ctcaaggaga caaccaggtt ctatgtccga 7560 catatatgtt gtcgccaggg ctgtctagag agggactcct ctatgagtta gagagcatat 7620 caaggaatgc actttcaata taccgagcca tcgaagaagg ggcatccaag ctaggtctga 7680 tcatcaagaa ggaagagacc atgtgtagtt atgactttct catttatgga aaaactccct 7740 tgtttcgagg taacatattg gtgcctgaat ccaaaagatg ggccagagtc tcgtgcatct 7800 ctaacgacca aatagtcaat cttgccaata taatgtcgac agtgtctacc aatgcgctaa 7860 ctgtggcaca acactctcag tctttgatca agccgatgag ggactttctg ctcatgtcag 7920 tacaggcagt ctttcactac ctgttattta gcccaatctt gaagggccga gtttacaaga 7980 ttctgagtgc agaaggggag agctttctcc tagccatgtc gaggataatc tatctagacc 8040 cttctttagg aggggtgtct gggatgtctc ttggaaggtt tcatatacgt caattctcag 8100 accctgtctc tgaagggttg tccttctgga gagagatctg gttaagctcc cacgagtcct 8160 ggattcacgc gttgtgtcaa gaggctggga acccagatct tggagagaga acactcgaga 8220 gcttcactcg ccttctagaa gatcctacca ccttaaatat taaaggaggt gccagtccta 8280 ccattctact caaggatgca atcagaaagg ctctgtatga cgaagtggac aaggtggaaa 8340 actcagagtt tcgagaggcg atcttgttgt ccaagaccca tagagataac ttcatactct 8400 tcttaaaatc tgttgagcct ctgtttcctc gatttctcag tgagctcttc agttcgtctt 8460 tcttgggaat ccccgagtca atcattggac tgatacaaaa ctcccggacg ataagaaggc 8520 agtttagaaa gagtctctca agaactttag aagaatcctt ctacaactca gagattcatg 8580 ggattaatcg gatgacccag acacctcaaa gggtcgggag ggtgtggcct tgctcttcag 8640 agagggcaga cctacttagg gagatctctt ggggaagaaa agtggtaggc acgacagttc 8700 ctcacccttc tgagatgttg gggttacttc caaaatcttc catctcttgc acttgtggag 8760 caacaggggg aggcaatcct agagtttctg tatcagtact cccgtccttt gatcagtcat 8820 ttttttcaag aggtccccta aagggatact tgggctcatc cacctctatg tcaacccaac 8880 tattccatgc atgggaaaaa gtcactaatg ttcatgtggt gaaaagggct ctatctttaa 8940 aagaatctat aaactggttc attactagaa attccaactt ggctcaaacc ctaattagga 9000 atattatgtc tctgacaggc cctgatttcc ctctagagga ggcccctgtt tttaaaagga 9060 cagggtcagc cttgcatagg ttcaagtctg ccagatacag cgaaggaggg tactcttctg 9120 tttgcccgaa cctcctctct catatctctg ttagtacaga cactatgtct gacttgactc 9180 aagacgggaa gaactacgac ttcatgttcc agccattgat gctttatgcg cagacgtgga 9240 catcagagct ggtacagaga gacacaaggc tgagggactc tacgtttcat tggcacctcc 9300 ggtgtaatag gtgtgtaagg cccatcgacg atataacact ggagacttct cagatcttcg 9360 agttcccgga tgtatcaaaa agaatatcca gaatggtctc tggggctgtg cctcacttcc 9420 agaaacttcc tgatatccgt ctgagacccg gtgattttga atctctaagt agtagagaaa 9480 agtctcgcca tatagggtcg gctcagggac tcttatactc aatcttagtg gcaattcacg 9540 actcaggata caatgatgga accatctttc ctgtcaacat ttacggcaaa gtctctccta 9600 gagattattt gagagggctc gcgagaggag tcttgatagg atcctcgatt tgcttcttga 9660 caagaatgac aaatatcaac atcaatagac ctctagagtt gatctcagga gtaatctcat 9720 atatcctcct gaggttagat aatcacccct ctttgtacat aatgctcaga gaaccgtctc 9780 ttagaggaga aatattctct atccctcaga aaatccccgc cgcttatcca accactatga 9840 aagaaggcaa cagatcgatt ttgtgttatc tccaacatgt gctacgctat gagcgagagg 9900 tgattacagc gtctccagag aatgactggc tgtggatctt ctctgacttt agaagtgcca 9960 aaatgacgta cctgaccctc attacttacc agtctcatct cctactccaa agggttgaga 10020 gaaatttgtc taagagtatg agagctaacc tgcgacaaat gagttctttg atgaggcaag 10080 tgctgggtgg gcacggagaa gatactttag agtccgacga cgacattcaa cgattactaa 10140 aagactcttt gcggagaaca aggtgggtgg atcaagaggt gcgtcatgca gctagaacca 10200 tgactggaga ttatagcccc tacaagaaag tgtctcgtaa agcaggatgt tcagaatggg 10260 tctgctctgc tcaacaggtt gcagtctcca cctcagcaaa cccagcccct gtctcagagc 10320 ttgacataag ggccctctct aagaggtttc aaaaccctct gatctcgggc ctgagagtgg 10380 ttcagtgggc aactggcgcc cattataaac ttaagcccat tctggatgat cttaacgttt 10440 tcccatccct ctgtcttgta gttggggacg ggtcaggggg gatatcaagg gcagttctta 10500 acatgttccc agatgccaag cttgtgttca acagcctctt ggaggtgaat gatctgatgg 10560 cttccggaac acatccattg cctccttcag caatcatgag tggtggagat gacatcgttt 10620 ccagagtgat agattttgac tcaatctggg aaaaaccgtc cgacctgagg aacttggcca 10680 cctggagata cttccagtca gtccaaaaac aggtcaacat gtcttatgac ctcatcattt 10740 gtgatgcaga agtcactgac attgcatcta tcaaccggat aaccctgtta atgtctgatt 10800 tcgcgttgtc tatagatgga ccactttatt tggtcttcaa aacttacggg actatgcttg 10860 taaacccaga ctataaggct attcaacacc tgtcaagagc gttcccctca gtcactgggt 10920 ttataaccca agtgacctcg tccttttcat cagagctata tctccgattc tccaaacgag 10980 gaaagttttt cagagatccc gagtacttga cctcttccac ccttcgggaa atgagccttg 11040 tattgttcaa ttgcagcagc cccaagagtg agatgcaaag agctcgttcc ttaaactatc 11100 aagatcttgt aaggggtttc cctgaagaaa tcatatcaaa tccttacaat gagatgatca 11160 taactctgat tgacagtgat gtagaatctt tcctagtcca caagatggtg gatgatcttg 11220 agttacagag gggaaccctg tctaaagtgg ctatcattat atccatcatg atagtttttt 11280 ccaacagagt cttcaacgtc tccaaaccct tgactgaccc cttgttctat ccaccgtccg 11340 atcccaaaat cctgaggcac ttcaacatct gttgcagtac tatgatgtat ctatccaccg 11400 ctttaggcga tgtccttagc ttcgcaagac ttcatgacct gtataaccga cctataactt 11460 attacttcag aaagcaagtc attcgaggga atatttatct atcttggagt tggtctgacg 11520 acgcctcagt gttcaagagg gtagcctgta attccagttt gagtctatcg tctcattgga 11580 tcaggttgat ttacaagata gtgaagacta ctagactcgt tggcagcatt gaggacttat 11640 ctggagaggt ggaaagacac cttcacgggt acaacaggtg gatcaccctc gaggatatca 11700 gatcgagatc atctctacta gactacagct gcttgtaaac cgagtactcc cagaagcttg 11760 tacacgctaa gactcttgtg cggtgtgtct tgaaaaaa 11798 // ID MK598341; SV 1; linear; viral cRNA; STD; VRL; 11799 BP. XX AC MK598341; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Rabies lyssavirus isolate 5247, complete genome. XX KW . XX OS Rabies lyssavirus OC Viruses; Riboviria; Negarnaviricota; Haploviricotina; Monjiviricetes; OC Mononegavirales; Rhabdoviridae; Lyssavirus. XX RN [1] RP 1-11799 RA Forro B., Banyai K.; RT ; RL Submitted (05-MAR-2019) to the INSDC. RL New Pathogen Discovery, Institute for Veterinary Medical Research, Hungaria RL krt. 21., Budapest H-1143, Hungary XX DR MD5; 70987bf87ad236a6ab2e33dd0f051712. XX CC ##Assembly-Data-START## CC Assembly Method :: Geneious v. 9.1.8 CC Sequencing Technology :: IonTorrent CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..11799 FT /organism="Rabies lyssavirus" FT /host="red fox" FT /isolate="5247" FT /mol_type="viral cRNA" FT /country="Hungary" FT /collection_date="2008" FT /db_xref="taxon:11292" FT gene 17..1369 FT /gene="N" FT CDS 17..1369 FT /codon_start=1 FT /gene="N" FT /product="nucleoprotein" FT /protein_id="QDZ26177.1" FT /translation="MDADKIVFKVNNQVISLKPEIIVDQYEYKYPAIKDLKKPCITLGK FT APDLNKAYKSVLSGMNAAKLDPDDVCSYLAAAMQFFEGTCPEDWTSYGIWIARKGDKIT FT PDSLVEIKRTDVEGNWALTGGMELTRDPTVSEHASLVGLLLSLYRLSKISGQNTGNYKT FT NIADRIEQIFETAPFVKIVEHHTLMTTHKMCANWSTIPNFRFLAGTYDMFFSRVEHLYS FT AIRVGTVVTAYEDCSGLVSFTGFIKQINLTAREAILYFFHKNFEEEIRRMFEPGQETAV FT PHSYFIHFRSLGLSGKSPYSSNAVGHVFNLIHFVGCYMGQVRSLNATVIAACAPHEMSV FT LGGYLGEEFFGRGTFERRFFRDEKELQEYEAAELTKTDVALADDGTVNSDDEDYFSGET FT RSPEAVYTRIMMNGGRLKRSHIRRYVSVSSNHQARPNSFAEFLNKTYSNDS" FT gene 1460..2353 FT /gene="P" FT CDS 1460..2353 FT /codon_start=1 FT /gene="P" FT /product="phosphoprotein" FT /protein_id="QDZ26178.1" FT /translation="MSKIFVNPSAIRAGLADLEMAEETVDLINKNIEDNQAHLQGEPIE FT VDNLPEDMRRLHLDDGKSSNFGEMAKAGEGKYREDFQMDEGEDPSLLFQSYLDNVGIQI FT VRQMRSGERFLKIWSQTVEEIISYVAVNFPSPPGRSSEDKSTQTTGREPKKETTSTPSQ FT RESKSSKARMAAQAASGPPALEWSATNEEDDLSVEAEIAHQIAESFSKKYKFPSRSSGI FT FLYNFEQLKMNLDDIVKEAKNVPGVTRLAHDGSKLPLRCVLGWVALANSKKFQLLAEAD FT KLSKIMQDDLNRYASC" FT gene 2443..3051 FT /gene="M" FT CDS 2443..3051 FT /codon_start=1 FT /gene="M" FT /product="matrix protein" FT /protein_id="QDZ26179.1" FT /translation="MNFLRKIVKNCRDEDAQKPSPVSAPPDDDDLWLPPPEYVPLKELT FT SKKNMRNFCINGEVKVCSPNGYSFRILRHILRSFDEIYSGNHRMIGLVKVVIGLALSGA FT PVPEGMNWVYKLRRTLIFQWADSRGPLEGEELEYSQEITWDDDTEFVGLQIRVSARQCH FT IQGKIWCINMNSRACQLWSDMSLQTQRSEEDKDSSLLLE" FT gene 3263..4837 FT /gene="G" FT CDS 3263..4837 FT /codon_start=1 FT /gene="G" FT /product="glycoprotein" FT /protein_id="QDZ26180.1" FT /translation="MFPQALLFVSLLVFSLCFGKFPIYTIPDKLGPWSPIDIHHLSCPN FT NLVVEDEGCTNLSGFSYMELKVGYISAIKVNGFTCTGVVTEAETYTNFVGYVTTTFKRK FT HFRPTPDACRAAYNWKMAGDPRYEESLHNPYPDYHWLRTVKTTKESLIVISPSVADLDP FT YDKSLHSRVFPSGKCSGITVSSTYCSTNHDYTIWMPENLRLGTSCDIFINSRGKRASKG FT SKTCGFVDERGLYKSLKGACKLKLCGVLGLRLMDGTWVAMQTSDETKWCPPDQLVNLHD FT FRSDEIEHLVVEELVKKREECLDALESIMTTKSVSFRRLSHLRKLVPGFGKAYTIFNKT FT LMEADAHYKSVRTWNEIIPSKGCLRVGGRCHPHVNGVFFNGIILGPDGHVLIPEMQSSL FT LQQHMELLESSVIPLMHPLADPSTVFKEGDEAEDFVEVHLPDVHKQVSGVDLGLPNWGK FT YVLLSAGALIALMLIIFLLTCCRRVSRPESTQHSLGGKGRKVSITPQSGKVISSWESYK FT SGGETRL" FT gene 5356..11739 FT /gene="L" FT CDS 5356..11739 FT /codon_start=1 FT /gene="L" FT /product="RNA dependent RNA polymerase" FT /protein_id="QDZ26181.1" FT /translation="MLDPGEVYDDPSDPVESEAEPRGAPTVPNILRNSDYNLNSPLIED FT PARLMLEWLKTGNRPYRMTPTDNCSRSYKVLKDYFKKVDLGSLKVGGTAAQSMISLWLY FT GAHSESNRSRRCITDLAHFYSKSSPIEKLLNCTLGNRGLKIPPEGVLSSLERVDYDKAF FT GRYLANTYSSYLFFHVITLYMNALDWDEEKTILALWRDLTSVDIGKDLVKFKDQIWGLL FT IVTKDFVYSQSSNCLFDRNYTLMLKDLFLSRFNSLMILLSPPEPRYSDDLISQLCQLYI FT AGDQVLSMCGNSGYEVIKILEPYVVNSLVQRAEKFRPLIHSLGDFPVFIKDKVSQLEGT FT FGPSAKKFFRVLDQFDNIHDLVFVYGCYRHWGHPYIDYRKGLSKLYDQVHIKKVIDKSY FT QECLASDLARRILRWGFDKYSKWYLDSRFLARDHPLTPYIKTQTWPPKHIVDLVGDTWH FT KLPITQIFEIPESMDPSEILDDKSHSFTRTRLASWLSENRGGPVPSEKVIITALSKPPV FT NPREFLKSIDLGGLPDEDLIIGLKPKERELKIEGRFFALMSWNLRLYFVITEKLLANYI FT LPLFDALTMTDNLNKVFKKLIDRVTGQGLLDYSRVTYAFHLDYEKWNNHQRLESTEDVF FT SVLDQVFGLKRVFSRTHEFFQKSWIYYSDRSDLIGLWEDQIYCLDMSNGPTCWNGQDGG FT LEGLRQKGWSLVSLLMIDRESQTRNTRTKILAQGDNQVLCPTYMLSPGLSREGLLYELE FT SISRNALSIYRAIEEGASKLGLIIKKEETMCSYDFLIYGKTPLFRGNILVPESKRWARV FT SCISNDQIVNLANIMSTVSTNALTVAQHSQSLIKPMRDFLLMSVQAVFHYLLFSPILKG FT RVYKILSAEGESFLLAMSRIIYLDPSLGGVSGMSLGRFHIRQFSDPVSEGLSFWREIWL FT SSHESWIHALCQEAGNPDLGERTLESFTRLLEDPTTLNIKGGASPTILLKDAIRKALYD FT EVDKVENSEFREAILLSKTHRDNFILFLKSVEPLFPRFLSELFSSSFLGIPESIIGLIQ FT NSRTIRRQFRKSLSRTLEESFYNSEIHGINRMTQTPQRVGRVWPCSSERADLLREISWG FT RKVVGTTVPHPSEMLGLLPKSSISCTCGATGGGNPRVSVSVLPSFDQSFFSRGPLKGYL FT GSSTSMSTQLFHAWEKVTNVHVVKRALSLKESINWFITRNSNLAQTLIRNIMSLTGPDF FT PLEEAPVFKRTGSALHRFKSARYSEGGYSSVCPNLLSHISVSTDTMSDLTQDGKNYDFM FT FQPLMLYAQTWTSELVQRDTRLRDSTFHWHLRCNRCVRPIDDITLETSQIFEFPDVSKR FT ISRMVSGAVPHFQKLPDIRLRPGDFESLSSREKSRHIGSAQGLLYSILVAIHDSGYNDG FT TIFPVNIYGKVSPRDYLRGLARGVLIGSSICFLTRMTNININRPLELISGVISYILLRL FT DNHPSLYIMLREPSLRGEIFSIPQKIPAAYPTTMKEGNRSILCYLQHVLRYEREVITAS FT PENDWLWIFSDFRSAKMTYLTLITYQSHLLLQRVERNLSKSMRANLRQMSSLMRQVLGG FT HGEDTLESDDDIQRLLKDSLRRTRWVDQEVRHAARTMTGDYSPYKKVSRKAGCSEWVCS FT AQQVAVSTSANPAPVSELDIRALSKRFQNPLISGLRVVQWATGAHYKLKPILDDLNVFP FT SLCLVVGDGSGGISRAVLNMFPDAKLVFNSLLEVNDLMASGTHPLPPSAIMSGGDDIVS FT RVIDFDSIWEKPSDLRNLATWRYFQSVQKQVNMSYDLIICDAEVTDIASINRITLLMSD FT FALSIDGPLYLVFKTYGTMLVNPDYKAIQHLSRAFPSVTGFITQVTSSFSSELYLRFSK FT RGKFFRDPEYLTSSTLREMSLVLFNCSSPKSEMQRARSLNYQDLVRGFPEEIISNPYNE FT MIITLIDSDVESFLVHKMVDDLELQRGTLSKVAIIISIMIVFSNRVFNVSKPLTDPLFY FT PPSDPKILRHFNICCSTMMYLSTALGDVLSFARLHDLYNRPITYYFRKQVIRGNIYLSW FT SWSDDASVFKRVACNSSLSLSSHWIRLIYKIVKTTRLVGSIEDLSGEVERHLHGYNRWI FT TLEDIRSRSSLLDYSCL" XX SQ Sequence 11799 BP; 3354 A; 2587 C; 2730 G; 3128 T; 0 other; atgtaacacc cctacaatgg atgccgacaa gattgtattc aaagtcaaca atcaggtgat 60 ttctttgaag cctgagatca tcgtggatca atatgagtac aagtaccctg ctatcaaaga 120 cttgaaaaag ccctgtataa ccctagggaa agcccccgac ttaaacaaag catacaagtc 180 agttttatca ggcatgaatg cagccaaact tgatcctgat gatgtatgtt cctacttggc 240 agcagcaatg cagttctttg aggggacgtg tccggaggat tggaccagct atggaatctg 300 gattgcaaga aaaggagaca agatcacccc ggattctctg gtggaaataa agcgtactga 360 tgtagaagga aattgggctc tgacaggagg catggagctg acaagggacc ccactgtctc 420 tgaacatgcg tctttagtcg gccttctctt gagtctgtat aggttgagca aaatatcagg 480 acaaaacact ggtaactata aaacaaacat cgcagatagg atagagcaga ttttcgagac 540 cgcccctttt gttaaaatcg tggaacacca tactctaatg acaactcaca aaatgtgtgc 600 taattggagt actataccaa acttcagatt tttggccggg acctatgaca tgtttttctc 660 ccgggttgag catctatatt cagcaatcag agtgggcacg gttgtcactg cttatgaaga 720 ctgttcaggt ctggtatcgt ttactgggtt cataaagcag atcaatctca ccgcaagaga 780 agcaatacta tacttcttcc ataagaactt tgaggaagag ataagaagaa tgtttgagcc 840 gggacaggag acagccgttc ctcactccta cttcattcac ttccgttcac tgggcttgag 900 tgggaagtct ccttactcat cgaatgctgt tggtcatgtg ttcaatctca ttcactttgt 960 tggatgctat atgggtcaag tcagatccct aaatgcaaca gttattgccg catgtgctcc 1020 ccatgagatg tctgttctgg ggggttatct gggagaggaa ttctttggga gaggaacatt 1080 cgaaagaaga ttcttcagag atgagaagga acttcaagaa tacgaggcgg ctgaactgac 1140 aaagaccgac gtagctttgg cagatgatgg aactgtcaac tctgacgatg aagactactt 1200 ctccggtgaa accagaagtc cagaggctgt ttatactcga attatgatga atggaggccg 1260 actgaagaga tcgcatatac ggagatatgt ctcagtcagt tcaaatcatc aagctcgtcc 1320 aaactcattt gctgaatttc taaacaagac atattcgaat gactcataag gagttgaatg 1380 acattgtgcc agaaatctat tgattgtgta catccatcat gaaaaaaact aacacccctc 1440 ctttcggacc atctcaaata tgagcaagat tttcgtcaat ccgagtgcta tcagagccgg 1500 tctggccgat cttgagatgg ctgaagagac tgttgatctg atcaataaaa acatagaaga 1560 caatcaggct catctccagg gagaacccat agaagtggac aatctccctg aggacatgcg 1620 gcgacttcac ctggatgatg gaaaatcatc caactttggt gagatggcca aagcggggga 1680 aggcaagtat cgagaggact ttcagatgga tgaaggagag gatcctagcc tcctgttcca 1740 gtcatacctg gacaatgttg gaatccaaat agtcagacaa atgaggtcgg gagagagatt 1800 cctcaagata tggtcacaga ccgtagaaga gattatatcc tatgttgcgg tcaactttcc 1860 cagtcctcca ggaaggtcct cagaggacaa atcaacccaa actactggtc gagagcctaa 1920 gaaagagaca acatccaccc cttctcagag agaaagcaaa tcttcgaaag ccaggatggc 1980 agctcaagct gcctctggcc ctccagccct tgaatggtct gctaccaatg aagaggatga 2040 tctatcagta gaggctgaga ttgctcacca gattgctgaa agcttctcaa agaagtacaa 2100 atttccctct cgatcctcag ggatattctt gtataatttt gagcagttga agatgaacct 2160 tgatgatata gttaaagagg caaaaaatgt gccaggcgtg acccgtttgg ctcatgacgg 2220 atccaaactc cctctaagat gtgtactggg atgggttgct ttggccaatt ccaagaaatt 2280 ccaattgttg gcagaggccg acaagctaag taaaatcatg caggatgatt tgaatcgcta 2340 tgcatcctgc taaccggact tttaaatttt tgtccctcta gacaataaaa tctgagatgc 2400 cctagagtcg acatgaaaaa aacaggcaac accactgata aaatgaactt tctacgcaag 2460 atagtgaaaa attgtaggga tgaggacgct caaaagccct ctcctgtgtc cgcccctccg 2520 gatgacgatg acctgtggct tccaccccct gaatacgtcc cgctgaaaga actcacaagc 2580 aagaagaaca tgaggaactt ttgtatcaac ggggaggtta aagtgtgtag cccaaatggt 2640 tactcattca ggatcctgcg gcacattctg agatcattcg acgagatata ctctgggaat 2700 cataggatga ttgggctggt caaagtcgtc attggactag ctttgtcagg agctccagtc 2760 cctgagggca tgaactgggt atacaaactg aggagaaccc ttatcttcca gtgggctgat 2820 tccaggggtc ctcttgaagg agaagagttg gaatactcac aggagatcac ttgggatgat 2880 gatactgagt tcgttggatt gcaaataaga gtaagtgcaa gacaatgtca tatccagggc 2940 aaaatctggt gtatcaacat gaactcaaga gcatgtcagc tatggtctga catgtctctc 3000 cagacacaaa ggtccgaaga ggacaaagac tcctctctgc ttctagaata atcggattat 3060 atcccgcaag tttatcactt gtatacctct ggaggagaga acatacgagc ttaactccaa 3120 cccttgggag caatagaaca aaaacatgtt atggtgccat taaaccgctg cattttatca 3180 aagtcaagtt aattaccttt acattttgag cctcttggat gtgaaaaaaa ctattaacat 3240 ccctcaaaag acttaaggaa aaatgtttcc tcaggctctt ttgtttgtat cccttctggt 3300 tttttcattg tgtttcggga aattccctat ttacacaata ccagacaaac ttggtccttg 3360 gagcccgatt gacatacatc atctcagctg cccaaacaat ttggttgtag aggacgaagg 3420 atgcaccaac ctgtcagggt tttcctacat ggaacttaaa gttggatata tctcagccat 3480 aaaagtgaac gggtttactt gcacgggcgt tgtgacagag gcagaaacct acactaactt 3540 tgttggttat gtcaccacca cgttcaaaag aaagcatttc cgtccaacac cagatgcatg 3600 tagagccgca tacaactgga agatggccgg tgaccccaga tatgaggagt ctctacacaa 3660 tccgtaccct gactaccatt ggctacgaac tgtaaaaacc actaaggagt ctctcattgt 3720 catatcccca agtgtggcag atttggaccc atatgacaaa tcccttcact caagggtctt 3780 ccctagtgga aagtgctcag gaataacagt gtcttctacc tactgctcaa ctaaccacga 3840 ttacaccatt tggatgcccg agaatctgag actagggacg tcttgtgaca tttttattaa 3900 tagtagagga aagagagcat ccaaagggag taagacctgc ggctttgtag atgagagagg 3960 cctgtataag tctctaaaag gagcatgcaa actcaagtta tgtggagttc ttggactcag 4020 acttatggat ggaacatggg tcgcgatgca aacatcagat gagaccaaat ggtgccctcc 4080 tgatcagttg gtgaatctgc acgactttcg ctcggatgaa attgagcatc ttgttgtaga 4140 ggagttggtc aagaagaggg aggagtgtct ggatgcacta gagtccatca tgaccaccaa 4200 gtcagtgagt ttcagacgtc tcagtcattt aagaaaactt gttcctgggt ttggaaaagc 4260 atatactata ttcaacaaga ccttgatgga ggcagatgct cactacaaat cagttcggac 4320 ttggaacgag atcatcccct caaaagggtg cttaagagtt ggagggagat gtcaccctca 4380 tgtgaacggg gtgtttttca atggcataat attagggcct gatggccatg ttctaatccc 4440 agagatgcag tcatccctcc tccagcaaca tatggagttg ttggaatcct cagttattcc 4500 cctgatgcac cccctggcag acccgtccac agttttcaag gaaggtgatg aggctgagga 4560 ctttgttgaa gttcaccttc ccgatgtgca caaacaggtc tcaggggtag acctgggcct 4620 cccaaactgg gggaagtatg tattgctgag tgcaggggcc ctgattgcct tgatgttgat 4680 aattttccta cttacatgtt gtagaagagt cagtcgacca gaatctacgc agcacagtct 4740 tggagggaaa gggaggaagg tgtcgatcac tccccaaagc gggaaggtta tatcttcatg 4800 ggagtcatat aagagtgggg gtgaaactag actgtaaagg ctggtcatcc ttttgacgct 4860 tcaagtctta aaggtcacat ccccctgggg ttggggggaa tctctgggtc caatagtcct 4920 ccttgaactc catgcaacag ggtagattta agagtcatga gactttcatt aatcatctcg 4980 gttgatcaaa ctaggtcatg tagattctca taatacggga aatcttctag cagtttcagt 5040 gaccaatggt gctttcattc tccaggaact ggtaccaaag gttgtagacg ggccgagagg 5100 tatttcggac gactccgcgc ctgggcacgg acagaagtca tagtgagtct cgtgatagca 5160 gactcagcat gagtttattg agaaaggcaa tctgcctccc atgaaggaca taagcaatag 5220 ctcacaatca tcttgcatct cagcaaaata tgcataatta caaagggctg ggccatctaa 5280 gcttttcagt cgagaaaaaa actgtagatc aaaagagcaa ctggcaacac ttctcatcct 5340 gaaccctata tcaagatgct agatccagga gaggtctatg atgaccccag tgatccagtc 5400 gagtcagagg ctgaacccag aggggccccc actgtcccta acatcttgag aaactctgac 5460 tacaatctca actccccttt gatagaagac cctgcgagac taatgttaga atggttgaaa 5520 acagggaata gaccttatcg gatgactccg acagacaatt gttccaggtc ttacaaagtt 5580 ttgaaagatt atttcaagaa ggtggatctg ggttctctga aagtgggcgg aactgctgca 5640 cagtcaatga tttctctttg gttatatggt gcccactctg aatcaaacag gagccggaga 5700 tgtataacag acttggctca tttctattca aagtcatccc ccatagagaa gctgttaaat 5760 tgtacgctag gaaatagagg gctgaaaatc ccccccgagg gggtgttaag ttctcttgag 5820 agggtcgatt acgataaggc atttgggagg tatcttgcca acacgtattc ctcttatttg 5880 tttttccatg taatcaccct atacatgaat gccctggact gggacgaaga aaaaaccatc 5940 ttggcattat ggagagattt aacctcagtg gacatcggga aggacttggt caagttcaaa 6000 gatcaaatat ggggactgct gattgtaacg aaggactttg tttactccca gagttctaac 6060 tgtctttttg acagaaacta tacacttatg ctaaaagatc tttttttgtc tcgcttcaac 6120 tccttaatga tcttgctctc tccccccgag ccccgatact cagacgactt gatatctcag 6180 ctgtgccagt tatacatcgc tggggatcag gtcttgtcca tgtgtggaaa ctccggatat 6240 gaagtcatta aaatattgga gccatatgtt gtaaatagtt tagtccagag agcagagaag 6300 tttaggcctc tcattcattc cttgggagac tttcctgtat ttataaaaga caaggtgagt 6360 cagcttgaag ggactttcgg tcccagtgcc aagaagtttt ttagggttct ggatcagttc 6420 gacaacatac atgatttggt ttttgtgtat ggctgttaca ggcattgggg gcatccctat 6480 atagattatc gaaagggtct atctaaacta tatgatcaag ttcacattaa gaaagtgata 6540 gacaagtcct accaagagtg tttggcaagc gacctagcca ggaggatcct cagatgggga 6600 tttgataaat actccaagtg gtatctggat tcacgattcc ttgctcgaga ccaccccttg 6660 actccttata tcaaaaccca gacatggcca cccaaacata tagtagactt agtgggggat 6720 acctggcaca agctcccgat cacgcaaatc tttgagattc ctgaatcaat ggacccgtca 6780 gaaatactgg atgacaaatc acattctttc accagaacaa gactagcttc ttggctgtca 6840 gagaaccgag gtgggcctgt tcccagtgag aaagttatta tcacagcctt gtctaagccg 6900 cctgtcaatc cccgagagtt tttaaaatct atagacctcg gaggattgcc agatgaggac 6960 ttaataattg gcctcaagcc aaaggaacga gaattgaaga ttgagggtcg attctttgct 7020 ctaatgtcat ggaatctaag attgtatttc gttatcaccg aaaagcttct ggctaattac 7080 atcttgccac tttttgacgc actgaccatg acagacaacc tgaacaaggt gtttaagaag 7140 ctgatcgacc gggtcactgg gcaagggctt ttggactatt cgagggttac atatgcattt 7200 catctggact atgaaaagtg gaataatcat caaagattag agtcaacaga ggatgtgttc 7260 tctgtcctgg atcaggtatt tggattgaag agagtgtttt ctagaacaca tgagtttttt 7320 cagaagtcat ggatttatta ttcggacaga tcagacctca tcgggttatg ggaggatcaa 7380 atatactgct tggatatgtc caacggccca acctgctgga atggccagga cggcgggcta 7440 gagggcttac ggcagaaggg ctggagtcta gtcagcttat tgatgataga tagagaatct 7500 caaaccagga acacaagaac caaaatacta gctcaaggag acaaccaggt tctatgtccg 7560 acatatatgt tgtcgccagg gctgtctaga gagggactcc tctatgagtt agagagcata 7620 tcaaggaatg cactttcaat ataccgagcc atcgaagaag gggcatccaa gctaggtctg 7680 atcatcaaga aggaagagac catgtgtagt tatgactttc tcatttatgg aaaaactccc 7740 ttgtttcgag gtaacatatt ggtgcctgaa tccaaaagat gggccagagt ctcgtgcatc 7800 tctaacgacc aaatagtcaa tcttgccaat ataatgtcga cagtgtctac caatgcgcta 7860 actgtggcac aacactctca gtctttgatc aagccgatga gggactttct gctcatgtca 7920 gtacaggcag tctttcacta cctgttattt agcccaatct tgaagggccg agtttacaag 7980 attctgagtg cagaagggga gagctttctc ctagccatgt cgaggataat ctatctagac 8040 ccttctttag gaggggtgtc tgggatgtct cttggaaggt ttcatatacg tcaattctca 8100 gaccctgtct ctgaagggtt gtccttctgg agagagatct ggttaagctc ccacgagtcc 8160 tggattcacg cgttgtgtca agaggctggg aacccagatc ttggagagag aacactcgag 8220 agcttcactc gccttctaga agatcctacc accttaaata ttaagggagg tgccagtcct 8280 accattctac tcaaggatgc aatcagaaag gctctgtatg acgaagtgga caaggtggaa 8340 aattcagagt ttcgagaggc gatcttgttg tccaagaccc atagagataa cttcatactc 8400 ttcttaaaat ctgttgagcc tctgtttcct cgatttctca gtgagctctt cagttcgtct 8460 ttcttgggaa tccccgagtc aatcattgga ctgatacaaa actcccggac gataagaagg 8520 cagtttagaa agagtctctc aagaacttta gaagaatcct tctacaactc agagattcat 8580 gggattaatc ggatgaccca gacacctcaa agggtcggga gggtgtggcc ttgctcttca 8640 gagagggcag acctacttag ggagatctct tggggaagaa aagtggtagg cacgacagtt 8700 cctcaccctt ctgagatgtt ggggttactt ccaaaatctt ccatctcttg cacttgtgga 8760 gcaacagggg gaggcaatcc tagagtttct gtatcagtac tcccgtcctt tgatcagtca 8820 tttttttcaa gaggtcccct aaagggatac ttgggctcat ccacctctat gtcaacccaa 8880 ctattccatg catgggaaaa agtcactaat gttcatgtgg tgaaaagggc tctatcttta 8940 aaagaatcta taaactggtt cattactaga aattccaact tggctcaaac cctaattagg 9000 aatattatgt ctctgacagg ccctgatttc cctctagagg aggcccctgt ttttaaaagg 9060 acagggtcag ccttgcatag gttcaagtct gccagataca gcgaaggagg gtactcttct 9120 gtttgcccga acctcctctc tcatatctct gttagtacag acactatgtc tgacttgact 9180 caagacggga agaactacga cttcatgttc cagccattga tgctttatgc gcagacgtgg 9240 acatcagagc tggtacagag agacacaagg ctgagggact ctacgtttca ttggcacctc 9300 cggtgtaata ggtgtgtaag gcccatcgac gatataacac tggagacttc tcagatcttc 9360 gagttcccgg atgtatcaaa aagaatatcc agaatggtct ctggggctgt gcctcacttc 9420 cagaaacttc ctgatatccg tctgagaccc ggtgattttg aatctctaag tagtagagaa 9480 aagtctcgcc atatagggtc ggctcaggga ctcttatact caatcttagt ggcaattcac 9540 gactcaggat acaatgatgg aaccatcttt cctgtcaaca tttacggcaa agtctctcct 9600 agagattatt tgagagggct cgcgagagga gtcttgatag gatcctcgat ttgcttcttg 9660 acaagaatga caaatatcaa catcaataga cctctagagt tgatctcagg agtaatctca 9720 tatatcctcc tgaggttaga taatcacccc tctttgtaca taatgctcag agaaccgtct 9780 cttagaggag aaatattctc tatccctcag aaaatccccg ccgcttatcc aaccactatg 9840 aaagaaggca acagatcgat tttgtgttat ctccaacatg tgctacgcta tgagcgagag 9900 gtgattacag cgtctccaga gaatgactgg ctgtggatct tctctgactt tagaagtgcc 9960 aaaatgacgt acctgaccct cattacttac cagtctcatc tcctactcca aagggttgag 10020 agaaatttgt ctaagagtat gagagctaac ctgcgacaaa tgagttcttt gatgaggcaa 10080 gtgctgggtg ggcacggaga agatacttta gagtccgacg acgacattca acgattacta 10140 aaagactctt tgcggagaac aaggtgggtg gatcaagagg tgcgtcatgc agctagaacc 10200 atgactggag attatagccc ctacaagaaa gtgtctcgta aagcaggatg ttcagaatgg 10260 gtctgctctg ctcaacaggt tgcagtctcc acctcagcaa acccagcccc tgtctcagag 10320 cttgacataa gggccctctc taagaggttt caaaaccctc tgatctcggg cctgagagtg 10380 gttcagtggg caactggcgc ccattataaa cttaagccca ttctggatga tcttaacgtt 10440 ttcccatccc tctgtcttgt agttggggac gggtcagggg ggatatcaag ggcagttctt 10500 aacatgttcc cagatgccaa gcttgtgttc aacagcctct tggaggtgaa tgatctgatg 10560 gcttccggaa cacatccatt gcctccttca gcaatcatga gtggtggaga tgacatcgtt 10620 tccagagtga tagattttga ctcaatctgg gaaaaaccgt ccgacctgag gaacttggcc 10680 acctggagat acttccagtc agtccaaaaa caggtcaaca tgtcttatga cctcatcatt 10740 tgtgatgcag aagtcactga cattgcatct atcaaccgga taaccctgtt aatgtctgat 10800 ttcgcgttgt ctatagatgg accactttat ttggtcttca aaacttacgg gactatgctt 10860 gtaaacccag actataaggc tattcaacac ctgtcaagag cgttcccctc agtcactggg 10920 tttataaccc aagtgacctc gtccttttca tcagagctat atctccgatt ctccaaacga 10980 ggaaagtttt tcagagatcc cgagtacttg acctcttcca cccttcggga aatgagcctt 11040 gtattgttca attgcagcag ccccaagagt gagatgcaaa gagctcgttc cttaaactat 11100 caagatcttg taaggggttt ccctgaagaa atcatatcaa atccttacaa tgagatgatc 11160 ataactctga ttgacagtga tgtagaatct ttcctagtcc acaagatggt ggatgatctt 11220 gagttacaga ggggaaccct gtctaaagtg gctatcatta tatccatcat gatagttttt 11280 tccaacagag tcttcaacgt ctccaaaccc ttgactgacc ccttgttcta tccaccgtcc 11340 gatcccaaaa tcctgaggca cttcaacatc tgttgcagta ctatgatgta tctatccacc 11400 gctttaggcg atgtccttag cttcgcaaga cttcatgacc tgtataaccg acctataact 11460 tattacttca gaaagcaagt cattcgaggg aatatttatc tatcttggag ttggtctgac 11520 gacgcctcag tgttcaagag ggtagcctgt aattccagtt tgagtctatc gtctcattgg 11580 atcaggttga tttacaagat agtgaagact actagactcg ttggcagcat tgaggactta 11640 tctggagagg tggaaagaca ccttcacggg tacaacaggt ggatcaccct cgaggatatc 11700 agatcgagat catctctact agactacagc tgcttgtaaa ccgagtactc ccagaagctt 11760 gtacacgcta agactcttgt gcggtgtgtc ttgaaaaaa 11799 // ID MK598342; SV 1; linear; viral cRNA; STD; VRL; 11799 BP. XX AC MK598342; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Rabies lyssavirus isolate 44190, complete genome. XX KW . XX OS Rabies lyssavirus OC Viruses; Riboviria; Negarnaviricota; Haploviricotina; Monjiviricetes; OC Mononegavirales; Rhabdoviridae; Lyssavirus. XX RN [1] RP 1-11799 RA Forro B., Banyai K.; RT ; RL Submitted (05-MAR-2019) to the INSDC. RL New Pathogen Discovery, Institute for Veterinary Medical Research, Hungaria RL krt. 21., Budapest H-1143, Hungary XX DR MD5; 70987bf87ad236a6ab2e33dd0f051712. XX CC ##Assembly-Data-START## CC Assembly Method :: Geneious v. 9.1.8 CC Sequencing Technology :: IonTorrent CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..11799 FT /organism="Rabies lyssavirus" FT /host="red fox" FT /isolate="44190" FT /mol_type="viral cRNA" FT /country="Hungary" FT /collection_date="2009" FT /db_xref="taxon:11292" FT gene 17..1369 FT /gene="N" FT CDS 17..1369 FT /codon_start=1 FT /gene="N" FT /product="nucleoprotein" FT /protein_id="QDZ26182.1" FT /translation="MDADKIVFKVNNQVISLKPEIIVDQYEYKYPAIKDLKKPCITLGK FT APDLNKAYKSVLSGMNAAKLDPDDVCSYLAAAMQFFEGTCPEDWTSYGIWIARKGDKIT FT PDSLVEIKRTDVEGNWALTGGMELTRDPTVSEHASLVGLLLSLYRLSKISGQNTGNYKT FT NIADRIEQIFETAPFVKIVEHHTLMTTHKMCANWSTIPNFRFLAGTYDMFFSRVEHLYS FT AIRVGTVVTAYEDCSGLVSFTGFIKQINLTAREAILYFFHKNFEEEIRRMFEPGQETAV FT PHSYFIHFRSLGLSGKSPYSSNAVGHVFNLIHFVGCYMGQVRSLNATVIAACAPHEMSV FT LGGYLGEEFFGRGTFERRFFRDEKELQEYEAAELTKTDVALADDGTVNSDDEDYFSGET FT RSPEAVYTRIMMNGGRLKRSHIRRYVSVSSNHQARPNSFAEFLNKTYSNDS" FT gene 1460..2353 FT /gene="P" FT CDS 1460..2353 FT /codon_start=1 FT /gene="P" FT /product="phosphoprotein" FT /protein_id="QDZ26183.1" FT /translation="MSKIFVNPSAIRAGLADLEMAEETVDLINKNIEDNQAHLQGEPIE FT VDNLPEDMRRLHLDDGKSSNFGEMAKAGEGKYREDFQMDEGEDPSLLFQSYLDNVGIQI FT VRQMRSGERFLKIWSQTVEEIISYVAVNFPSPPGRSSEDKSTQTTGREPKKETTSTPSQ FT RESKSSKARMAAQAASGPPALEWSATNEEDDLSVEAEIAHQIAESFSKKYKFPSRSSGI FT FLYNFEQLKMNLDDIVKEAKNVPGVTRLAHDGSKLPLRCVLGWVALANSKKFQLLAEAD FT KLSKIMQDDLNRYASC" FT gene 2443..3051 FT /gene="M" FT CDS 2443..3051 FT /codon_start=1 FT /gene="M" FT /product="matrix protein" FT /protein_id="QDZ26184.1" FT /translation="MNFLRKIVKNCRDEDAQKPSPVSAPPDDDDLWLPPPEYVPLKELT FT SKKNMRNFCINGEVKVCSPNGYSFRILRHILRSFDEIYSGNHRMIGLVKVVIGLALSGA FT PVPEGMNWVYKLRRTLIFQWADSRGPLEGEELEYSQEITWDDDTEFVGLQIRVSARQCH FT IQGKIWCINMNSRACQLWSDMSLQTQRSEEDKDSSLLLE" FT gene 3263..4837 FT /gene="G" FT CDS 3263..4837 FT /codon_start=1 FT /gene="G" FT /product="glycoprotein" FT /protein_id="QDZ26185.1" FT /translation="MFPQALLFVSLLVFSLCFGKFPIYTIPDKLGPWSPIDIHHLSCPN FT NLVVEDEGCTNLSGFSYMELKVGYISAIKVNGFTCTGVVTEAETYTNFVGYVTTTFKRK FT HFRPTPDACRAAYNWKMAGDPRYEESLHNPYPDYHWLRTVKTTKESLIVISPSVADLDP FT YDKSLHSRVFPSGKCSGITVSSTYCSTNHDYTIWMPENLRLGTSCDIFINSRGKRASKG FT SKTCGFVDERGLYKSLKGACKLKLCGVLGLRLMDGTWVAMQTSDETKWCPPDQLVNLHD FT FRSDEIEHLVVEELVKKREECLDALESIMTTKSVSFRRLSHLRKLVPGFGKAYTIFNKT FT LMEADAHYKSVRTWNEIIPSKGCLRVGGRCHPHVNGVFFNGIILGPDGHVLIPEMQSSL FT LQQHMELLESSVIPLMHPLADPSTVFKEGDEAEDFVEVHLPDVHKQVSGVDLGLPNWGK FT YVLLSAGALIALMLIIFLLTCCRRVSRPESTQHSLGGKGRKVSITPQSGKVISSWESYK FT SGGETRL" FT gene 5356..11739 FT /gene="L" FT CDS 5356..11739 FT /codon_start=1 FT /gene="L" FT /product="RNA dependent RNA polymerase" FT /protein_id="QDZ26186.1" FT /translation="MLDPGEVYDDPSDPVESEAEPRGAPTVPNILRNSDYNLNSPLIED FT PARLMLEWLKTGNRPYRMTPTDNCSRSYKVLKDYFKKVDLGSLKVGGTAAQSMISLWLY FT GAHSESNRSRRCITDLAHFYSKSSPIEKLLNCTLGNRGLKIPPEGVLSSLERVDYDKAF FT GRYLANTYSSYLFFHVITLYMNALDWDEEKTILALWRDLTSVDIGKDLVKFKDQIWGLL FT IVTKDFVYSQSSNCLFDRNYTLMLKDLFLSRFNSLMILLSPPEPRYSDDLISQLCQLYI FT AGDQVLSMCGNSGYEVIKILEPYVVNSLVQRAEKFRPLIHSLGDFPVFIKDKVSQLEGT FT FGPSAKKFFRVLDQFDNIHDLVFVYGCYRHWGHPYIDYRKGLSKLYDQVHIKKVIDKSY FT QECLASDLARRILRWGFDKYSKWYLDSRFLARDHPLTPYIKTQTWPPKHIVDLVGDTWH FT KLPITQIFEIPESMDPSEILDDKSHSFTRTRLASWLSENRGGPVPSEKVIITALSKPPV FT NPREFLKSIDLGGLPDEDLIIGLKPKERELKIEGRFFALMSWNLRLYFVITEKLLANYI FT LPLFDALTMTDNLNKVFKKLIDRVTGQGLLDYSRVTYAFHLDYEKWNNHQRLESTEDVF FT SVLDQVFGLKRVFSRTHEFFQKSWIYYSDRSDLIGLWEDQIYCLDMSNGPTCWNGQDGG FT LEGLRQKGWSLVSLLMIDRESQTRNTRTKILAQGDNQVLCPTYMLSPGLSREGLLYELE FT SISRNALSIYRAIEEGASKLGLIIKKEETMCSYDFLIYGKTPLFRGNILVPESKRWARV FT SCISNDQIVNLANIMSTVSTNALTVAQHSQSLIKPMRDFLLMSVQAVFHYLLFSPILKG FT RVYKILSAEGESFLLAMSRIIYLDPSLGGVSGMSLGRFHIRQFSDPVSEGLSFWREIWL FT SSHESWIHALCQEAGNPDLGERTLESFTRLLEDPTTLNIKGGASPTILLKDAIRKALYD FT EVDKVENSEFREAILLSKTHRDNFILFLKSVEPLFPRFLSELFSSSFLGIPESIIGLIQ FT NSRTIRRQFRKSLSRTLEESFYNSEIHGINRMTQTPQRVGRVWPCSSERADLLREISWG FT RKVVGTTVPHPSEMLGLLPKSSISCTCGATGGGNPRVSVSVLPSFDQSFFSRGPLKGYL FT GSSTSMSTQLFHAWEKVTNVHVVKRALSLKESINWFITRNSNLAQTLIRNIMSLTGPDF FT PLEEAPVFKRTGSALHRFKSARYSEGGYSSVCPNLLSHISVSTDTMSDLTQDGKNYDFM FT FQPLMLYAQTWTSELVQRDTRLRDSTFHWHLRCNRCVRPIDDITLETSQIFEFPDVSKR FT ISRMVSGAVPHFQKLPDIRLRPGDFESLSSREKSRHIGSAQGLLYSILVAIHDSGYNDG FT TIFPVNIYGKVSPRDYLRGLARGVLIGSSICFLTRMTNININRPLELISGVISYILLRL FT DNHPSLYIMLREPSLRGEIFSIPQKIPAAYPTTMKEGNRSILCYLQHVLRYEREVITAS FT PENDWLWIFSDFRSAKMTYLTLITYQSHLLLQRVERNLSKSMRANLRQMSSLMRQVLGG FT HGEDTLESDDDIQRLLKDSLRRTRWVDQEVRHAARTMTGDYSPYKKVSRKAGCSEWVCS FT AQQVAVSTSANPAPVSELDIRALSKRFQNPLISGLRVVQWATGAHYKLKPILDDLNVFP FT SLCLVVGDGSGGISRAVLNMFPDAKLVFNSLLEVNDLMASGTHPLPPSAIMSGGDDIVS FT RVIDFDSIWEKPSDLRNLATWRYFQSVQKQVNMSYDLIICDAEVTDIASINRITLLMSD FT FALSIDGPLYLVFKTYGTMLVNPDYKAIQHLSRAFPSVTGFITQVTSSFSSELYLRFSK FT RGKFFRDPEYLTSSTLREMSLVLFNCSSPKSEMQRARSLNYQDLVRGFPEEIISNPYNE FT MIITLIDSDVESFLVHKMVDDLELQRGTLSKVAIIISIMIVFSNRVFNVSKPLTDPLFY FT PPSDPKILRHFNICCSTMMYLSTALGDVLSFARLHDLYNRPITYYFRKQVIRGNIYLSW FT SWSDDASVFKRVACNSSLSLSSHWIRLIYKIVKTTRLVGSIEDLSGEVERHLHGYNRWI FT TLEDIRSRSSLLDYSCL" XX SQ Sequence 11799 BP; 3354 A; 2587 C; 2730 G; 3128 T; 0 other; atgtaacacc cctacaatgg atgccgacaa gattgtattc aaagtcaaca atcaggtgat 60 ttctttgaag cctgagatca tcgtggatca atatgagtac aagtaccctg ctatcaaaga 120 cttgaaaaag ccctgtataa ccctagggaa agcccccgac ttaaacaaag catacaagtc 180 agttttatca ggcatgaatg cagccaaact tgatcctgat gatgtatgtt cctacttggc 240 agcagcaatg cagttctttg aggggacgtg tccggaggat tggaccagct atggaatctg 300 gattgcaaga aaaggagaca agatcacccc ggattctctg gtggaaataa agcgtactga 360 tgtagaagga aattgggctc tgacaggagg catggagctg acaagggacc ccactgtctc 420 tgaacatgcg tctttagtcg gccttctctt gagtctgtat aggttgagca aaatatcagg 480 acaaaacact ggtaactata aaacaaacat cgcagatagg atagagcaga ttttcgagac 540 cgcccctttt gttaaaatcg tggaacacca tactctaatg acaactcaca aaatgtgtgc 600 taattggagt actataccaa acttcagatt tttggccggg acctatgaca tgtttttctc 660 ccgggttgag catctatatt cagcaatcag agtgggcacg gttgtcactg cttatgaaga 720 ctgttcaggt ctggtatcgt ttactgggtt cataaagcag atcaatctca ccgcaagaga 780 agcaatacta tacttcttcc ataagaactt tgaggaagag ataagaagaa tgtttgagcc 840 gggacaggag acagccgttc ctcactccta cttcattcac ttccgttcac tgggcttgag 900 tgggaagtct ccttactcat cgaatgctgt tggtcatgtg ttcaatctca ttcactttgt 960 tggatgctat atgggtcaag tcagatccct aaatgcaaca gttattgccg catgtgctcc 1020 ccatgagatg tctgttctgg ggggttatct gggagaggaa ttctttggga gaggaacatt 1080 cgaaagaaga ttcttcagag atgagaagga acttcaagaa tacgaggcgg ctgaactgac 1140 aaagaccgac gtagctttgg cagatgatgg aactgtcaac tctgacgatg aagactactt 1200 ctccggtgaa accagaagtc cagaggctgt ttatactcga attatgatga atggaggccg 1260 actgaagaga tcgcatatac ggagatatgt ctcagtcagt tcaaatcatc aagctcgtcc 1320 aaactcattt gctgaatttc taaacaagac atattcgaat gactcataag gagttgaatg 1380 acattgtgcc agaaatctat tgattgtgta catccatcat gaaaaaaact aacacccctc 1440 ctttcggacc atctcaaata tgagcaagat tttcgtcaat ccgagtgcta tcagagccgg 1500 tctggccgat cttgagatgg ctgaagagac tgttgatctg atcaataaaa acatagaaga 1560 caatcaggct catctccagg gagaacccat agaagtggac aatctccctg aggacatgcg 1620 gcgacttcac ctggatgatg gaaaatcatc caactttggt gagatggcca aagcggggga 1680 aggcaagtat cgagaggact ttcagatgga tgaaggagag gatcctagcc tcctgttcca 1740 gtcatacctg gacaatgttg gaatccaaat agtcagacaa atgaggtcgg gagagagatt 1800 cctcaagata tggtcacaga ccgtagaaga gattatatcc tatgttgcgg tcaactttcc 1860 cagtcctcca ggaaggtcct cagaggacaa atcaacccaa actactggtc gagagcctaa 1920 gaaagagaca acatccaccc cttctcagag agaaagcaaa tcttcgaaag ccaggatggc 1980 agctcaagct gcctctggcc ctccagccct tgaatggtct gctaccaatg aagaggatga 2040 tctatcagta gaggctgaga ttgctcacca gattgctgaa agcttctcaa agaagtacaa 2100 atttccctct cgatcctcag ggatattctt gtataatttt gagcagttga agatgaacct 2160 tgatgatata gttaaagagg caaaaaatgt gccaggcgtg acccgtttgg ctcatgacgg 2220 atccaaactc cctctaagat gtgtactggg atgggttgct ttggccaatt ccaagaaatt 2280 ccaattgttg gcagaggccg acaagctaag taaaatcatg caggatgatt tgaatcgcta 2340 tgcatcctgc taaccggact tttaaatttt tgtccctcta gacaataaaa tctgagatgc 2400 cctagagtcg acatgaaaaa aacaggcaac accactgata aaatgaactt tctacgcaag 2460 atagtgaaaa attgtaggga tgaggacgct caaaagccct ctcctgtgtc cgcccctccg 2520 gatgacgatg acctgtggct tccaccccct gaatacgtcc cgctgaaaga actcacaagc 2580 aagaagaaca tgaggaactt ttgtatcaac ggggaggtta aagtgtgtag cccaaatggt 2640 tactcattca ggatcctgcg gcacattctg agatcattcg acgagatata ctctgggaat 2700 cataggatga ttgggctggt caaagtcgtc attggactag ctttgtcagg agctccagtc 2760 cctgagggca tgaactgggt atacaaactg aggagaaccc ttatcttcca gtgggctgat 2820 tccaggggtc ctcttgaagg agaagagttg gaatactcac aggagatcac ttgggatgat 2880 gatactgagt tcgttggatt gcaaataaga gtaagtgcaa gacaatgtca tatccagggc 2940 aaaatctggt gtatcaacat gaactcaaga gcatgtcagc tatggtctga catgtctctc 3000 cagacacaaa ggtccgaaga ggacaaagac tcctctctgc ttctagaata atcggattat 3060 atcccgcaag tttatcactt gtatacctct ggaggagaga acatacgagc ttaactccaa 3120 cccttgggag caatagaaca aaaacatgtt atggtgccat taaaccgctg cattttatca 3180 aagtcaagtt aattaccttt acattttgag cctcttggat gtgaaaaaaa ctattaacat 3240 ccctcaaaag acttaaggaa aaatgtttcc tcaggctctt ttgtttgtat cccttctggt 3300 tttttcattg tgtttcggga aattccctat ttacacaata ccagacaaac ttggtccttg 3360 gagcccgatt gacatacatc atctcagctg cccaaacaat ttggttgtag aggacgaagg 3420 atgcaccaac ctgtcagggt tttcctacat ggaacttaaa gttggatata tctcagccat 3480 aaaagtgaac gggtttactt gcacgggcgt tgtgacagag gcagaaacct acactaactt 3540 tgttggttat gtcaccacca cgttcaaaag aaagcatttc cgtccaacac cagatgcatg 3600 tagagccgca tacaactgga agatggccgg tgaccccaga tatgaggagt ctctacacaa 3660 tccgtaccct gactaccatt ggctacgaac tgtaaaaacc actaaggagt ctctcattgt 3720 catatcccca agtgtggcag atttggaccc atatgacaaa tcccttcact caagggtctt 3780 ccctagtgga aagtgctcag gaataacagt gtcttctacc tactgctcaa ctaaccacga 3840 ttacaccatt tggatgcccg agaatctgag actagggacg tcttgtgaca tttttattaa 3900 tagtagagga aagagagcat ccaaagggag taagacctgc ggctttgtag atgagagagg 3960 cctgtataag tctctaaaag gagcatgcaa actcaagtta tgtggagttc ttggactcag 4020 acttatggat ggaacatggg tcgcgatgca aacatcagat gagaccaaat ggtgccctcc 4080 tgatcagttg gtgaatctgc acgactttcg ctcggatgaa attgagcatc ttgttgtaga 4140 ggagttggtc aagaagaggg aggagtgtct ggatgcacta gagtccatca tgaccaccaa 4200 gtcagtgagt ttcagacgtc tcagtcattt aagaaaactt gttcctgggt ttggaaaagc 4260 atatactata ttcaacaaga ccttgatgga ggcagatgct cactacaaat cagttcggac 4320 ttggaacgag atcatcccct caaaagggtg cttaagagtt ggagggagat gtcaccctca 4380 tgtgaacggg gtgtttttca atggcataat attagggcct gatggccatg ttctaatccc 4440 agagatgcag tcatccctcc tccagcaaca tatggagttg ttggaatcct cagttattcc 4500 cctgatgcac cccctggcag acccgtccac agttttcaag gaaggtgatg aggctgagga 4560 ctttgttgaa gttcaccttc ccgatgtgca caaacaggtc tcaggggtag acctgggcct 4620 cccaaactgg gggaagtatg tattgctgag tgcaggggcc ctgattgcct tgatgttgat 4680 aattttccta cttacatgtt gtagaagagt cagtcgacca gaatctacgc agcacagtct 4740 tggagggaaa gggaggaagg tgtcgatcac tccccaaagc gggaaggtta tatcttcatg 4800 ggagtcatat aagagtgggg gtgaaactag actgtaaagg ctggtcatcc ttttgacgct 4860 tcaagtctta aaggtcacat ccccctgggg ttggggggaa tctctgggtc caatagtcct 4920 ccttgaactc catgcaacag ggtagattta agagtcatga gactttcatt aatcatctcg 4980 gttgatcaaa ctaggtcatg tagattctca taatacggga aatcttctag cagtttcagt 5040 gaccaatggt gctttcattc tccaggaact ggtaccaaag gttgtagacg ggccgagagg 5100 tatttcggac gactccgcgc ctgggcacgg acagaagtca tagtgagtct cgtgatagca 5160 gactcagcat gagtttattg agaaaggcaa tctgcctccc atgaaggaca taagcaatag 5220 ctcacaatca tcttgcatct cagcaaaata tgcataatta caaagggctg ggccatctaa 5280 gcttttcagt cgagaaaaaa actgtagatc aaaagagcaa ctggcaacac ttctcatcct 5340 gaaccctata tcaagatgct agatccagga gaggtctatg atgaccccag tgatccagtc 5400 gagtcagagg ctgaacccag aggggccccc actgtcccta acatcttgag aaactctgac 5460 tacaatctca actccccttt gatagaagac cctgcgagac taatgttaga atggttgaaa 5520 acagggaata gaccttatcg gatgactccg acagacaatt gttccaggtc ttacaaagtt 5580 ttgaaagatt atttcaagaa ggtggatctg ggttctctga aagtgggcgg aactgctgca 5640 cagtcaatga tttctctttg gttatatggt gcccactctg aatcaaacag gagccggaga 5700 tgtataacag acttggctca tttctattca aagtcatccc ccatagagaa gctgttaaat 5760 tgtacgctag gaaatagagg gctgaaaatc ccccccgagg gggtgttaag ttctcttgag 5820 agggtcgatt acgataaggc atttgggagg tatcttgcca acacgtattc ctcttatttg 5880 tttttccatg taatcaccct atacatgaat gccctggact gggacgaaga aaaaaccatc 5940 ttggcattat ggagagattt aacctcagtg gacatcggga aggacttggt caagttcaaa 6000 gatcaaatat ggggactgct gattgtaacg aaggactttg tttactccca gagttctaac 6060 tgtctttttg acagaaacta tacacttatg ctaaaagatc tttttttgtc tcgcttcaac 6120 tccttaatga tcttgctctc tccccccgag ccccgatact cagacgactt gatatctcag 6180 ctgtgccagt tatacatcgc tggggatcag gtcttgtcca tgtgtggaaa ctccggatat 6240 gaagtcatta aaatattgga gccatatgtt gtaaatagtt tagtccagag agcagagaag 6300 tttaggcctc tcattcattc cttgggagac tttcctgtat ttataaaaga caaggtgagt 6360 cagcttgaag ggactttcgg tcccagtgcc aagaagtttt ttagggttct ggatcagttc 6420 gacaacatac atgatttggt ttttgtgtat ggctgttaca ggcattgggg gcatccctat 6480 atagattatc gaaagggtct atctaaacta tatgatcaag ttcacattaa gaaagtgata 6540 gacaagtcct accaagagtg tttggcaagc gacctagcca ggaggatcct cagatgggga 6600 tttgataaat actccaagtg gtatctggat tcacgattcc ttgctcgaga ccaccccttg 6660 actccttata tcaaaaccca gacatggcca cccaaacata tagtagactt agtgggggat 6720 acctggcaca agctcccgat cacgcaaatc tttgagattc ctgaatcaat ggacccgtca 6780 gaaatactgg atgacaaatc acattctttc accagaacaa gactagcttc ttggctgtca 6840 gagaaccgag gtgggcctgt tcccagtgag aaagttatta tcacagcctt gtctaagccg 6900 cctgtcaatc cccgagagtt tttaaaatct atagacctcg gaggattgcc agatgaggac 6960 ttaataattg gcctcaagcc aaaggaacga gaattgaaga ttgagggtcg attctttgct 7020 ctaatgtcat ggaatctaag attgtatttc gttatcaccg aaaagcttct ggctaattac 7080 atcttgccac tttttgacgc actgaccatg acagacaacc tgaacaaggt gtttaagaag 7140 ctgatcgacc gggtcactgg gcaagggctt ttggactatt cgagggttac atatgcattt 7200 catctggact atgaaaagtg gaataatcat caaagattag agtcaacaga ggatgtgttc 7260 tctgtcctgg atcaggtatt tggattgaag agagtgtttt ctagaacaca tgagtttttt 7320 cagaagtcat ggatttatta ttcggacaga tcagacctca tcgggttatg ggaggatcaa 7380 atatactgct tggatatgtc caacggccca acctgctgga atggccagga cggcgggcta 7440 gagggcttac ggcagaaggg ctggagtcta gtcagcttat tgatgataga tagagaatct 7500 caaaccagga acacaagaac caaaatacta gctcaaggag acaaccaggt tctatgtccg 7560 acatatatgt tgtcgccagg gctgtctaga gagggactcc tctatgagtt agagagcata 7620 tcaaggaatg cactttcaat ataccgagcc atcgaagaag gggcatccaa gctaggtctg 7680 atcatcaaga aggaagagac catgtgtagt tatgactttc tcatttatgg aaaaactccc 7740 ttgtttcgag gtaacatatt ggtgcctgaa tccaaaagat gggccagagt ctcgtgcatc 7800 tctaacgacc aaatagtcaa tcttgccaat ataatgtcga cagtgtctac caatgcgcta 7860 actgtggcac aacactctca gtctttgatc aagccgatga gggactttct gctcatgtca 7920 gtacaggcag tctttcacta cctgttattt agcccaatct tgaagggccg agtttacaag 7980 attctgagtg cagaagggga gagctttctc ctagccatgt cgaggataat ctatctagac 8040 ccttctttag gaggggtgtc tgggatgtct cttggaaggt ttcatatacg tcaattctca 8100 gaccctgtct ctgaagggtt gtccttctgg agagagatct ggttaagctc ccacgagtcc 8160 tggattcacg cgttgtgtca agaggctggg aacccagatc ttggagagag aacactcgag 8220 agcttcactc gccttctaga agatcctacc accttaaata ttaagggagg tgccagtcct 8280 accattctac tcaaggatgc aatcagaaag gctctgtatg acgaagtgga caaggtggaa 8340 aattcagagt ttcgagaggc gatcttgttg tccaagaccc atagagataa cttcatactc 8400 ttcttaaaat ctgttgagcc tctgtttcct cgatttctca gtgagctctt cagttcgtct 8460 ttcttgggaa tccccgagtc aatcattgga ctgatacaaa actcccggac gataagaagg 8520 cagtttagaa agagtctctc aagaacttta gaagaatcct tctacaactc agagattcat 8580 gggattaatc ggatgaccca gacacctcaa agggtcggga gggtgtggcc ttgctcttca 8640 gagagggcag acctacttag ggagatctct tggggaagaa aagtggtagg cacgacagtt 8700 cctcaccctt ctgagatgtt ggggttactt ccaaaatctt ccatctcttg cacttgtgga 8760 gcaacagggg gaggcaatcc tagagtttct gtatcagtac tcccgtcctt tgatcagtca 8820 tttttttcaa gaggtcccct aaagggatac ttgggctcat ccacctctat gtcaacccaa 8880 ctattccatg catgggaaaa agtcactaat gttcatgtgg tgaaaagggc tctatcttta 8940 aaagaatcta taaactggtt cattactaga aattccaact tggctcaaac cctaattagg 9000 aatattatgt ctctgacagg ccctgatttc cctctagagg aggcccctgt ttttaaaagg 9060 acagggtcag ccttgcatag gttcaagtct gccagataca gcgaaggagg gtactcttct 9120 gtttgcccga acctcctctc tcatatctct gttagtacag acactatgtc tgacttgact 9180 caagacggga agaactacga cttcatgttc cagccattga tgctttatgc gcagacgtgg 9240 acatcagagc tggtacagag agacacaagg ctgagggact ctacgtttca ttggcacctc 9300 cggtgtaata ggtgtgtaag gcccatcgac gatataacac tggagacttc tcagatcttc 9360 gagttcccgg atgtatcaaa aagaatatcc agaatggtct ctggggctgt gcctcacttc 9420 cagaaacttc ctgatatccg tctgagaccc ggtgattttg aatctctaag tagtagagaa 9480 aagtctcgcc atatagggtc ggctcaggga ctcttatact caatcttagt ggcaattcac 9540 gactcaggat acaatgatgg aaccatcttt cctgtcaaca tttacggcaa agtctctcct 9600 agagattatt tgagagggct cgcgagagga gtcttgatag gatcctcgat ttgcttcttg 9660 acaagaatga caaatatcaa catcaataga cctctagagt tgatctcagg agtaatctca 9720 tatatcctcc tgaggttaga taatcacccc tctttgtaca taatgctcag agaaccgtct 9780 cttagaggag aaatattctc tatccctcag aaaatccccg ccgcttatcc aaccactatg 9840 aaagaaggca acagatcgat tttgtgttat ctccaacatg tgctacgcta tgagcgagag 9900 gtgattacag cgtctccaga gaatgactgg ctgtggatct tctctgactt tagaagtgcc 9960 aaaatgacgt acctgaccct cattacttac cagtctcatc tcctactcca aagggttgag 10020 agaaatttgt ctaagagtat gagagctaac ctgcgacaaa tgagttcttt gatgaggcaa 10080 gtgctgggtg ggcacggaga agatacttta gagtccgacg acgacattca acgattacta 10140 aaagactctt tgcggagaac aaggtgggtg gatcaagagg tgcgtcatgc agctagaacc 10200 atgactggag attatagccc ctacaagaaa gtgtctcgta aagcaggatg ttcagaatgg 10260 gtctgctctg ctcaacaggt tgcagtctcc acctcagcaa acccagcccc tgtctcagag 10320 cttgacataa gggccctctc taagaggttt caaaaccctc tgatctcggg cctgagagtg 10380 gttcagtggg caactggcgc ccattataaa cttaagccca ttctggatga tcttaacgtt 10440 ttcccatccc tctgtcttgt agttggggac gggtcagggg ggatatcaag ggcagttctt 10500 aacatgttcc cagatgccaa gcttgtgttc aacagcctct tggaggtgaa tgatctgatg 10560 gcttccggaa cacatccatt gcctccttca gcaatcatga gtggtggaga tgacatcgtt 10620 tccagagtga tagattttga ctcaatctgg gaaaaaccgt ccgacctgag gaacttggcc 10680 acctggagat acttccagtc agtccaaaaa caggtcaaca tgtcttatga cctcatcatt 10740 tgtgatgcag aagtcactga cattgcatct atcaaccgga taaccctgtt aatgtctgat 10800 ttcgcgttgt ctatagatgg accactttat ttggtcttca aaacttacgg gactatgctt 10860 gtaaacccag actataaggc tattcaacac ctgtcaagag cgttcccctc agtcactggg 10920 tttataaccc aagtgacctc gtccttttca tcagagctat atctccgatt ctccaaacga 10980 ggaaagtttt tcagagatcc cgagtacttg acctcttcca cccttcggga aatgagcctt 11040 gtattgttca attgcagcag ccccaagagt gagatgcaaa gagctcgttc cttaaactat 11100 caagatcttg taaggggttt ccctgaagaa atcatatcaa atccttacaa tgagatgatc 11160 ataactctga ttgacagtga tgtagaatct ttcctagtcc acaagatggt ggatgatctt 11220 gagttacaga ggggaaccct gtctaaagtg gctatcatta tatccatcat gatagttttt 11280 tccaacagag tcttcaacgt ctccaaaccc ttgactgacc ccttgttcta tccaccgtcc 11340 gatcccaaaa tcctgaggca cttcaacatc tgttgcagta ctatgatgta tctatccacc 11400 gctttaggcg atgtccttag cttcgcaaga cttcatgacc tgtataaccg acctataact 11460 tattacttca gaaagcaagt cattcgaggg aatatttatc tatcttggag ttggtctgac 11520 gacgcctcag tgttcaagag ggtagcctgt aattccagtt tgagtctatc gtctcattgg 11580 atcaggttga tttacaagat agtgaagact actagactcg ttggcagcat tgaggactta 11640 tctggagagg tggaaagaca ccttcacggg tacaacaggt ggatcaccct cgaggatatc 11700 agatcgagat catctctact agactacagc tgcttgtaaa ccgagtactc ccagaagctt 11760 gtacacgcta agactcttgt gcggtgtgtc ttgaaaaaa 11799 // ID MK598343; SV 1; linear; viral cRNA; STD; VRL; 11798 BP. XX AC MK598343; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Rabies lyssavirus isolate 18072, complete genome. XX KW . XX OS Rabies lyssavirus OC Viruses; Riboviria; Negarnaviricota; Haploviricotina; Monjiviricetes; OC Mononegavirales; Rhabdoviridae; Lyssavirus. XX RN [1] RP 1-11798 RA Forro B., Banyai K.; RT ; RL Submitted (05-MAR-2019) to the INSDC. RL New Pathogen Discovery, Institute for Veterinary Medical Research, Hungaria RL krt. 21., Budapest H-1143, Hungary XX DR MD5; 1dd57c0773786d8ed714d49724259eae. XX CC ##Assembly-Data-START## CC Assembly Method :: Geneious v. 9.1.8 CC Sequencing Technology :: IonTorrent CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..11798 FT /organism="Rabies lyssavirus" FT /host="red fox" FT /isolate="18072" FT /mol_type="viral cRNA" FT /country="Hungary" FT /collection_date="2008" FT /db_xref="taxon:11292" FT gene 17..1369 FT /gene="N" FT CDS 17..1369 FT /codon_start=1 FT /gene="N" FT /product="nucleoprotein" FT /protein_id="QDZ26187.1" FT /translation="MDADKIVFKVNNQVVSLKPEIIVDQYEYKYPAIKDLKKPCITLGK FT APDLNKAYKSILSGMNAAKLDPDDVCSYLAAAMQFFEGTCPEDWTSYGILIARKGNKIT FT PDSLVEIKRTDVEGNWALTGGLELTRDPTVPEHASLVGLLLSLYRLSKISGQNTGNYKT FT NIADRIEQIFETAPFVKIVEHHTLMTTHKMCANWSTIPNFRFLAGTYDMFFSRIEHLYS FT AIRVGTVVTAYEDCSGLVSFTGFIKQINLTAREAILYFFHKNFEEEIRRMFEPGQETAV FT PHSYFIHFRSLGLSGKSPYSSNAVGHVFNLIHFVGCYMGQVRSLNATVIATCAPHEMSV FT LGGYLGEEFFGKGTFERRFFRDEKELQEYEAAELTKTDVALADDGTVNSDDEDYFSGET FT RSPEAVYTRIMMNGGRLKRSHIRRYVSVSSNHQARPNSFAEFLNKTYANDS" FT gene 1460..2353 FT /gene="P" FT CDS 1460..2353 FT /codon_start=1 FT /gene="P" FT /product="phosphoprotein" FT /protein_id="QDZ26188.1" FT /translation="MSKIFVNPSAIRAGLADLEMAEETVDLINRNIEDNQAHLQGEPIE FT VDNLPEDMRRLHLDEGKSSNLGEMAKAGEGRYREDFQMDEGEDPSLLFQSYLDNVGVQI FT VRQMRSGERFLKIWSQTVEEIISYVTVNFPNPPGRSSEDKSTQTVGRDPKKETTSNPSQ FT RESQPSKARMAAQAASGPPALEWSATNEEDDLSVEAEIAHQIAESFSKKYKFPSRSSGI FT FLYNFEQLKMNLDDIVKEVKNVPGVTRLAHDGSKLPLRCVLGWVALANSKKFQLLVEAD FT KLSKIMQDDLNRYASC" FT gene 2442..3050 FT /gene="M" FT CDS 2442..3050 FT /codon_start=1 FT /gene="M" FT /product="matrix protein" FT /protein_id="QDZ26189.1" FT /translation="MNFLRKIVKNCRDEDTQKPSPASAPPDDDDLWLPPPEYIPLKELT FT GRKNMRNFCINGEVKVCSPNGYSFRILRHILRSFDEIYSGNHRMIGLVKVVIGLALSGA FT PVPEGMNWVYKLRRTLIFQWADSRGPLEGEELEYSQEITWDDDTEFVGLQIRVSARQCH FT IQGRIWCINMNSRACQLWSDMSLQTQRSEEDKDSSLLLE" FT gene 3262..4836 FT /gene="G" FT CDS 3262..4836 FT /codon_start=1 FT /gene="G" FT /product="glycoprotein" FT /protein_id="QDZ26190.1" FT /translation="MVPQALLFVPLLGFPLCFGKFPIYTIPDKIGPWSPIDIHHLSCPN FT NLVVEDEGCTNLSGFSYMELKVGYISAIKVNGFTCTGVVTEAETYTNFVGYVTTTFKRK FT HFRPTPDACRAAYNWKMAGDPRYEESLHNPYPDYHWLRTVKTTKESLVIISPSVADLDP FT YDKSLHSRVFPGGKCSGITVSSTYCSTNHDYTIWLPENPRLGTSCDIFTNSRGKRASKG FT SKTCGFIDERGLYKSLKGACKLKLCGVLGLRLMDGTWVAMQTSDEAKWCPPDQLVNLHD FT FRSDEIEHLVVEELVKKREECLDALESIMTTKSVSFRRLSHLRKLVPGFGKAYTIFNKT FT LMEADAHYKSVRTWNEIIPSKGCLRVGGRCHPHVNGVFFNGIILGPDGHVLIPEMQSSL FT LQQHMELLESSVIPLMHPLADPSTVFKDGDEAEDFVEVHLPDVHKQVSGVDLGIPNWGK FT YVLLSAGALIALMLIIFLMTCCRRVNRPKPTQRSFGGTRRKVSITSQGGKVISSWESYK FT SGGETRL" FT gene 5355..11738 FT /gene="L" FT CDS 5355..11738 FT /codon_start=1 FT /gene="L" FT /product="RNA dependent RNA polymerase" FT /protein_id="QDZ26191.1" FT /translation="MLDPGEVYDDPIDPVDSEAEPRGASTVPNILRNSDYNLNSPLIED FT PARLMLEWLKTGNRPYRMTLTDNGSRSYKVLKNYLKKVDLGSLKVGGTAAQSMISLWLY FT SAHSESNRSRRCITDLAHFYSKSSPIEKLLNCTLGNRGLRIPPEGVLSCLERVDYDKAF FT GRYLANTYSSYLFFHVITLYMNALDWDEEKTILALWKDLTSVDIGKDLVKFKDQIWGLL FT IVTKDFVYSQSSNCLFDRNYTLMLKDLFLSRFNSLMILLSPPEPRYSDDLISQLCQLYI FT AGDQVLSMCGNSGYEVIKILEPYVVNSLVQRAEKFRPLIHSLGDFPVFIKDKVSQLEGT FT FGPSAKRFFRVLDQFDNIHDLVFVYGCYRHWGHPYIDYRKGLSKLYDQVHIKKVIDKSY FT QECLASDLARRILRWGFDKYSKWYLDSRFLARDHPLTPYIKTQTWPPKHIVDLVGDTWH FT KLPIMQIFEIPESMDPSEILDDKSHSFTRTRLASWLSENRGGPVPSEKVIITALSKPPV FT NPREFLKSVDLGGLPDEDLIIGLKPKERELKIEGRFFALMSWNLRLYFVITEKLLANYI FT LPLFDALTMTDNLNKVFKKLIDRVTGQGLLDYSRVTYAFHLDYEKWNNHQRLESTEDVF FT SVLDQVFGLKRVFSRTHEFFQKSWIYYSDRSDLIGLWEDQIYCLDMSNGPTCWNGQDGG FT LEGLRQKGWSLVSLLMIDRESQTRNTRTKILAQGDNQVLCPTYMLSPGLSREGLLYELE FT SISRNALSIYRAIEEGASKLGLIIKKEETMCSYDFLIYGKTPLFRGNILVPESKRWARV FT SCISNDQIVNLANIMSTVSTNALTVAQHSQSLIKPMRDFLLMSVQAVFHYLLFSPILKG FT RVYKILSAEGENFLLAMSRIIYLDPSLGGVSGMSLGRFHIRQFSDPVSEGLSFWREIWL FT SSHESWIHALCQEAGNPDLGERTLESFTRLLEDPTTLNIKGGASPTILLKDAIRKALYD FT EVDKVENSEFREAILLSKTHRDNFILFLKSVEPLFPRFLSELFSSSFLGIPESIIGLIQ FT NSRTIRRQFRKSLSRTLEESFYNSEIHGINRMTQTPQRVGRVWPCSSERADLLREISWG FT RKVVGTTVPHPSEMLGLLPKSSISCTCGAIGGGNPRVSVSVLPSFDQSFFSRGPLKGYL FT GSSTSMSTQLFHAWEKVTNVHVVKRALSLKESINWFITRNSNLAQTLIRNIMSLTGPDF FT PLEEAPVFKRTGSALHRFKSARYSEGGYSSVCPNLLSHISVSTDTMSDLTQDGKNYDFM FT FQPLMLYAQTWTSELVQRDTRLRDSTFHWHLRCNRCVRPIDDITLETSQIFEFPDVSKR FT ISRMVSGAVPHFQKLPDIRLRPGDFESLSGREKSRHIGSAQGLLYSILVAIHDSGYNDG FT TIFPVNIYGRVSPRDYLRGLARGVLIGSSICFLTRMTNININRPLELISGVISYILLRL FT DNHPSLYIMLREPSLRGEIFSIPQKIPAAYPTTMKEGNRSILCYLQHVLRYEREVITAS FT PENDWLWIFSDFRSAKMTYLTLITYQSHLLLQRVEKNLSKSMRANLRQMSSLMRQVLGG FT HGEDTLESDDDIQRLLKDSLRRTRWVDQEVRHAARTMTGDYSPNKKVSRKAGCSEWVCS FT AQQVAVSTSANPAPVSELDIRALSKRFQNPLISGLRVVQWATGAHYKLKPILDDLNVFP FT SLCLVVGDGSGGISRAVLNMFPDAKLVFNSLLEVNDLMASGTHPLPPSAIMSGGDDIVS FT RVIDFESIWEKPSDLRNLATWRYFQSVQKQVNMSYDLIICDAEVTDIASINRITLLMSD FT FVLSIDGPLYLVFKTYGTMLVNPDYQAIQHLSRAFPSVTGFITQVTSSFSSELYLRFSK FT RGKFFRDAEYLTSSTLREMSLVLFNCSSPKSEMQRARSLNYQDLVRGFPEEIISNPYNE FT MIITLIDSDVESFLVHKMVDDLELQRGTLSKVAIIIAIMIVFSNRVFNVSKPLTDPLFY FT PPSDPKILRHFNICCSTMMYLSTALGDVPSFARLHDLYNRPITYYFRKQVIRGNIYLSW FT SWSDDTPVFKRVACNSSLSLSSHWIRLIYKIVKTTRLVGSIEDLSGEVERHLRGYNRWI FT TLEDIRSRSSLLDYSCL" XX SQ Sequence 11798 BP; 3335 A; 2585 C; 2770 G; 3108 T; 0 other; atgtaacacc cctacaatgg atgccgacaa gattgtattc aaagtcaata atcaggtggt 60 ttctttgaag ccagagatta tcgtggatca atatgagtac aagtacccag ctatcaaaga 120 tttgaaaaag ccctgtataa ccctagggaa agcccccgac ttaaacaaag catacaagtc 180 aatcttatca ggcatgaatg cagccaaact tgatcctgat gatgtatgtt cctatttggc 240 agcagcaatg cagttctttg aggggacgtg tccagaggac tggaccagct atggaatatt 300 gatcgcacga aaaggaaaca agatcacccc ggattctctg gtggaaataa agcgtactga 360 tgtagaagga aattgggctc taacaggagg cttggaactg acaagagacc ccactgtccc 420 cgagcatgcg tctttagttg gtcttctctt gagtctgtat aggttgagca aaatatcagg 480 acaaaacact ggtaactata aaacaaacat cgcagatagg atagagcaga ttttcgagac 540 agcccctttt gttaaaatcg tggaacacca tactctaatg acaactcaca aaatgtgtgc 600 caattggagt actataccga atttcagatt tttggccggg acctacgata tgtttttctc 660 tcggattgag catctatatt cggcaatcag agtgggcacg gttgttactg cttatgaaga 720 ctgttcaggt ctggtatcgt ttacggggtt cataaagcag atcaatctca ctgcaaggga 780 agcaatacta tacttcttcc acaagaactt tgaggaagag ataagaagaa tgttcgagcc 840 agggcaggag acagctgttc ctcactccta tttcattcac ttccgttcat taggtttgag 900 tgggaagtct ccttattcat cgaatgccgt tggtcatgtg ttcaatctca ttcactttgt 960 cggatgctat atgggtcaag tcagatccct aaatgcaaca gtcattgcta catgtgctcc 1020 tcatgagatg tctgttctag ggggctatct aggagaggaa ttctttggaa aaggaacatt 1080 cgaaagaagg ttcttcagag atgagaaaga acttcaagaa tacgaggcgg ctgaactgac 1140 aaagactgac gtggcattgg cagatgatgg aactgtcaac tctgacgatg aggactactt 1200 ctccggtgaa accagaagtc cagaagccgt gtatactcga attatgatga atggaggtag 1260 actaaagaga tcgcatataa ggagatatgt ctcagtcagt tcgaatcatc aagctcgtcc 1320 aaactcgttt gctgagtttc tgaacaagac atatgctaac gactcatgag gagttgaata 1380 acagtgtgcc agaaatctgt cgattgtgga tatccatcat gaaaaaaact aacacccctc 1440 ctttcgaacc gtcccaaata tgagcaagat tttcgtcaat ccgagtgcta tcagagcagg 1500 tctggccgat cttgagatgg ctgaagagac tgttgatctg atcaatagaa acatagaaga 1560 caatcaggct catctccagg gggaacccat agaagtggac aatctccctg aggacatgcg 1620 gcgacttcac ctggatgagg gaaaatcgtc caacctcggt gaaatggcca aagcaggaga 1680 aggcaggtat cgagaggact ttcagatgga tgaaggagag gaccctagcc tcctgttcca 1740 gtcatacctg gacaatgttg gagtccaaat agtcagacaa atgaggtcag gagagagatt 1800 cctcaagata tggtcacaga ctgtagaaga aattatatcc tatgtcacgg tcaactttcc 1860 caaccctcca gggaggtcct cagaggacaa atctacccaa actgttggta gagaccccaa 1920 aaaggaaaca acatccaatc cttctcagag agaaagccaa ccttcgaaag ccaggatggc 1980 ggctcaagct gcctctggcc ctccagccct tgaatggtct gctaccaatg aagaagatga 2040 tctatcagta gaggctgaga ttgctcacca gattgctgaa agcttttcca agaagtacaa 2100 gtttccctct cgatcctcag ggatattcct gtataatttt gagcagctga agatgaacct 2160 tgatgatata gttaaggagg taaaaaatgt gccaggcgtg acccgtttag ctcatgacgg 2220 atccaaactc cccctaagat gtgtactggg atgggttgct ttagccaatt ccaagaaatt 2280 ccaattgtta gtagaggccg acaagctaag taaaatcatg caggatgatt tgaatcgcta 2340 tgcatcctgc taaacgaact tctaaactcg gtccctctag ataataaaat ctgagatgtc 2400 ccagagtcaa catgaaaaaa acaggcaaca ccactgataa aatgaacttt ctacgcaaga 2460 tagtgaaaaa ctgtagggat gaggacactc aaaaaccctc tcccgcgtca gcccctccgg 2520 atgacgatga cctgtggctt ccaccccctg aatacatccc gctgaaagaa ctcacaggca 2580 ggaagaacat gaggaacttt tgtatcaacg gggaggttaa agtgtgtagc ccgaatggtt 2640 actcgttcag gatcctgcgg cacattctga gatcattcga cgagatatac tctgggaatc 2700 ataggatgat tggattggtt aaagttgtta ttggactagc tttgtcagga gctccggtcc 2760 ctgagggcat gaactgggtg tacaaactga ggagaaccct tatcttccaa tgggctgatt 2820 ccaggggtcc tcttgaaggg gaggagttgg aatattcaca ggagatcact tgggatgatg 2880 atactgagtt cgtcggattg caaatcagag tgagcgcaag acaatgtcat atccagggca 2940 gaatctggtg tatcaacatg aactccagag catgtcagct atggtctgac atgtctcttc 3000 agacacaaag gtccgaagag gacaaagact cctctctgct tctagaataa tcagattata 3060 tcccgcaagt ttatcacttg tatacctctg gaggagagaa catacgagct taactccaac 3120 ccttgggagc aatagaacaa aaacatgtta tggtgccatt aaaccgctgc attttatcaa 3180 agtcaagtta attaccttta cattttgagc ctcttggatg tgaaaaaaac tattaacatc 3240 cctcaaaaga cttaaggaaa gatggttcct caggctcttt tgtttgtacc ccttcttggt 3300 tttcccttgt gtttcgggaa attccctatt tacacaatac cagacaaaat tggtccttgg 3360 agtccgattg acatacatca tctcagctgc ccaaacaatt tggttgtaga ggacgaagga 3420 tgcaccaacc tgtcagggtt ctcctacatg gaacttaaag ttggatacat ctcagccata 3480 aaagtgaacg ggtttacttg cacgggcgtt gtgacagagg cagaaaccta caccaacttt 3540 gttggttatg tcaccaccac gttcaaaagg aagcatttcc gtccaacccc agatgcatgt 3600 agagctgcgt acaactggaa gatggccggt gaccccagat atgaggagtc tctacataat 3660 ccgtaccctg actaccattg gcttcgaact gtaaaaacca ccaaggagtc tctcgttatc 3720 atatccccaa gtgtggcaga tttagaccca tatgacaaat ctcttcactc gagggtcttc 3780 cctggtggaa agtgctcagg aataacggtg tcttctacct actgctcaac taaccacgat 3840 tacaccattt ggctgcccga gaatccgaga ctagggacgt cttgtgacat ttttaccaat 3900 agtagaggga agagagcctc caaagggagt aagacctgtg gctttataga tgagagaggc 3960 ttgtataagt cgctaaaagg agcatgcaaa ctcaagttat gtggagttct tggacttaga 4020 cttatggatg gaacatgggt tgcgatgcaa acatcggatg aggccaaatg gtgccctcct 4080 gatcagttgg tgaatctgca cgactttcgc tcggatgaaa ttgagcacct tgttgtagag 4140 gagctggtca agaaaagaga ggagtgtctg gatgcactag aatccatcat gaccaccaag 4200 tcagtgagtt tcagacgcct cagtcattta agaaagcttg tccctgggtt tggaaaagca 4260 tataccatat tcaacaagac cttgatggag gccgatgctc actacaagtc agtccgaaca 4320 tggaatgaga tcatcccctc aaaagggtgt ttaagagttg gagggaggtg tcatcctcat 4380 gtgaacgggg tgtttttcaa tggtataata ttagggcctg acggccatgt tctaatccca 4440 gagatgcaat catccctcct tcagcaacat atggagttgt tggaatcctc agtcattccc 4500 ctgatgcacc ccctggcaga cccgtccaca gttttcaagg acggtgatga ggctgaggat 4560 tttgttgaag ttcacctccc agatgtgcac aaacaggtct cgggggttga cctgggcatc 4620 ccaaactggg ggaagtatgt attactgagt gcaggggccc tgattgcctt gatgttgata 4680 attttcctaa tgacatgttg cagaagagtc aatcgaccaa aacctacgca gcgcagtttc 4740 ggagggacaa ggaggaaggt gtcgatcact tcccaaggcg ggaaggtcat atcttcatgg 4800 gagtcatata agagtggggg tgagactaga ctgtgaagga tggtcatcct ttcgacgctt 4860 caagtcctga agatcacctc tcctcggggt tggggggagt ctctgggttc aatggtcctc 4920 cttgaactcc gtgcaacagg gtagattcaa gagtcatgag actttcatta atcatctcag 4980 ttgatcaaac taggtcatgt agattctcat aatacgggaa atcttctagc agtttcattg 5040 accaacggtg ctttcattct cccggaactg gtaccagagg ttgtagacgg gccgagaggt 5100 atttcagatg actccgtgcc tgggcacaga caggggtcat agtgagtcct atgatagcgg 5160 actcagcatg agtttattga gaaaggcaag ctgcctccca tgaaggacat aagcaatagt 5220 tcacaatcat cttgcatctc ggcaaagtgt gcataattat aaagggctgg gtcatctaag 5280 cttttcagtc gagaaaaaaa ctgtagacca aaggagcaac tggtaacact tctcatcctg 5340 aagcctacat caagatgcta gatccaggag aggtctatga tgaccccatt gatccagtcg 5400 attcggaggc tgagcccaga ggagcctcca ctgtccctaa catcttgaga aactctgact 5460 acaatctcaa ttcccctttg atagaagacc ctgcgagact aatgttggaa tggttgaaaa 5520 cagggaatag accttatcgg atgactctta cagacaacgg ctccaggtct tacaaagtgt 5580 tgaaaaatta tctcaagaaa gtagatctgg gttctctgaa agtgggcggg actgctgcac 5640 agtcaatgat ttctctttgg ttatacagtg cccactctga atcaaacagg agccggaggt 5700 gtataacaga cttggctcat ttctactcca agtcatcccc catagagaag ctgttaaatt 5760 gcactctagg aaatagaggg ctgagaatcc cccctgaggg ggtgttaagt tgccttgaga 5820 gggtcgatta tgataaggca tttgggaggt atcttgccaa cacgtattcc tcttatttgt 5880 ttttccatgt aatcacccta tacatgaatg ccctagactg ggacgaagaa aaaaccatct 5940 tagcattatg gaaagatttg acctcagtgg acatcgggaa ggacttggtc aagttcaaag 6000 atcaaatatg gggactgctg attgtgacaa aagactttgt ttactctcag agttctaact 6060 gcctttttga tagaaactat acacttatgc taaaagatct ttttttgtct cgcttcaact 6120 ccttaatgat cttgctctcc ccccccgagc ctcgatactc agacgacttg atatctcagc 6180 tgtgccagct atacatcgct ggggatcagg tcttgtccat gtgtggaaac tccggctatg 6240 aggtcattaa aatattggag ccatatgttg tgaacagttt agtccagaga gcagaaaagt 6300 ttaggcctct tattcattcc ttgggagact ttcctgtatt tataaaagac aaggtgagtc 6360 agcttgaagg gacttttggt cccagtgcaa aaaggttttt tagggttctg gatcagttcg 6420 acaacataca tgatttagtt tttgtgtatg gctgttacag gcattggggg cacccctaca 6480 tagattaccg aaagggtcta tcaaaactat atgatcaagt tcacatcaaa aaagtgatag 6540 acaagtccta ccaggagtgt ttggcaagcg acctagccag gaggatcctt agatgggggt 6600 ttgataagta ctccaagtgg tatctggatt cgcgattcct tgcccgagac caccccttga 6660 ctccttatat caaaacccaa acatggccac ccaaacatat agtagacttg gtgggggata 6720 cctggcacaa gctcccgatc atgcaaatct ttgagattcc tgaatcaatg gacccgtcag 6780 aaatactgga tgacaaatca cattctttca ccagaacaag actagcttct tggctgtcag 6840 agaaccgagg agggcctgtt cctagtgaga aagttattat cacggccttg tctaagccgc 6900 ctgtcaatcc ccgagagttt ttgaaatctg tagacctcgg aggattgcca gatgaggact 6960 taataattgg cctcaagcca aaggagcgag aattgaagat tgagggtaga ttctttgctc 7020 tgatgtcatg gaatctaaga ttgtattttg tcatcaccga aaagctcctg gctaactaca 7080 tcttgccact ttttgacgca ctgaccatga cagacaacct gaacaaggtg tttaaaaagt 7140 tgatcgacag ggtcactggt caagggctct tagactattc gagggttaca tatgcatttc 7200 atttggacta tgagaagtgg aacaatcatc aaagattaga gtcaacagag gatgtgttct 7260 ctgtcctgga tcaggtgttt ggattgaaga gagtgttttc cagaacacat gagttttttc 7320 agaagtcctg gatctattac tcagacagat cagacctcat cgggttatgg gaggatcaaa 7380 tatactgctt ggatatgtcc aacggcccaa cttgctggaa tggccaggac ggcgggctag 7440 agggcttacg gcagaagggc tggagtctag tcagcttatt gatgatagat agagaatccc 7500 aaaccaggaa cacgagaact aaaatactag ctcaaggaga caaccaggtt ctatgtccga 7560 catacatgtt gtcgccgggg ctgtctagag aggggctcct ctatgagtta gagagcatat 7620 caaggaatgc actttcaata tatcgagcca tcgaggaagg ggcatccaaa ctagggctga 7680 tcatcaagaa ggaagagacc atgtgtagtt atgactttct catttatggg aaaactccct 7740 tgtttcgagg taacatattg gtgcctgagt ccaaaagatg ggccagagtc tcttgcatct 7800 ctaatgacca gatagtcaac ctcgccaata taatgtcgac agtgtccacc aatgcgctga 7860 cagtggcaca acactctcaa tctttgatca agcctatgag ggattttctg ctcatgtcgg 7920 tgcaggcagt ctttcactac ctgttgttta gcccaatctt aaaaggcaga gtttacaaaa 7980 ttttgagtgc tgaaggggag aactttctcc tggccatgtc gaggataatc tatctagacc 8040 cttctttggg aggggtgtct ggaatgtctc ttggaaggtt tcatatacgc caattctcag 8100 accctgtctc tgaagggttg tccttctgga gagagatctg gttaagctcc cacgagtcct 8160 ggattcatgc gttgtgtcaa gaggctggga acccagatct tggagagagg acactagaga 8220 gcttcactcg ccttctagaa gatcctacca ccttaaatat aaaaggaggt gccagtccta 8280 ccattctact caaggatgcg atcagaaagg ctctgtatga cgaagtggac aaggtggaaa 8340 attcagagtt tcgagaggct atcctattgt ccaagaccca tagagataac ttcatactct 8400 tcttaaagtc tgttgagcct ctgtttcctc gatttctcag tgagctcttc agctcgtctt 8460 tcttggggat ccccgagtcg atcattggac tgatacaaaa ctcccggacg ataagaagac 8520 agtttagaaa gagcctctca agaactttag aagaatcgtt ctacaactca gagatccatg 8580 ggattaatcg gatgacccag acacctcaaa gggtcgggag ggtgtggcct tgctcttcag 8640 agagggcaga tctacttagg gagatctctt ggggaagaaa agtggtaggc acaacagttc 8700 ctcacccttc tgagatgttg gggttacttc ccaaatcctc catttcatgc acttgtggag 8760 caataggagg aggcaatcct agagtttctg tatcagtact cccgtccttc gaccagtcat 8820 tcttttcacg gggtccccta aagggatact tgggctcgtc cacctctatg tcaactcagc 8880 tattccatgc atgggaaaaa gtcactaatg ttcatgtggt gaagagggct ctatcgttaa 8940 aagaatctat aaactggttc attactagaa actccaattt ggctcaaact ctaattagga 9000 acattatgtc tctgacaggc cccgatttcc ctctagagga ggcccctgtt ttcaaaagga 9060 cagggtcagc cttgcatagg ttcaagtctg ccagatacag tgaaggagga tattcttctg 9120 tttgcccgaa cctcctctcc catatctctg ttagtacaga cactatgtct gatttgactc 9180 aagacgggaa gaactacgac ttcatgtttc agccattgat gctttatgcg cagacatgga 9240 catcagagct ggtacagaga gacacaaggc tgagggattc tacgttccat tggcacctcc 9300 ggtgcaacag gtgtgtaagg cccattgacg atataacact ggagacttct cagatcttcg 9360 agttcccgga tgtatcaaaa agaatatcca gaatggtttc tggggctgtg cctcacttcc 9420 agaagcttcc tgatattcgt ctgagaccag gtgattttga gtctctaagt ggtagggaaa 9480 agtctcgcca tatagggtcg gctcagggac tcttatactc aattttagtg gcaattcacg 9540 actcaggata caatgatgga accatcttcc ctgtcaacat ttacggcaga gtctccccta 9600 gagattattt gagagggctc gcgaggggag tcttgatagg atcttcgatt tgcttcttga 9660 caagaatgac aaatatcaac attaatagac ctcttgagtt gatctcagga gtaatctcat 9720 atatcctcct gaggttagat aatcacccct ccttgtacat aatgctcaga gaaccgtctc 9780 ttagaggaga aatattttct atccctcaga aaatcccagc cgcttatccg accactatga 9840 aagaaggcaa cagatcgatc ttgtgttatc tccaacatgt gctacgctat gagcgagagg 9900 taatcacggc gtccccagag aatgactggc tgtggatctt ctcagacttt agaagtgcta 9960 agatgacgta cctgaccctc attacttacc agtctcacct cctactccag agggttgaga 10020 aaaatttgtc caagagtatg agagctaacc tgcgacaaat gagctccctg atgaggcagg 10080 tactgggtgg gcatggagaa gatactttag agtccgacga cgacattcaa agattactaa 10140 aagactctct gcgaagaaca aggtgggtgg atcaagaggt gcgccatgca gctagaacca 10200 tgactggaga ttatagcccc aacaagaaag tgtctcgtaa ggcaggatgt tcagaatggg 10260 tttgctctgc tcaacaggtt gcagtctcca catcggcaaa cccagcccct gtctcagagc 10320 ttgacataag ggccctctct aagagatttc aaaacccctt gatctcaggc ttgagggtgg 10380 ttcagtgggc aaccggcgcc cattataagc ttaagcccat tctagacgat cttaatgttt 10440 tcccatccct ctgtcttgtg gttggggacg ggtcaggggg gatatcaagg gcagttctta 10500 acatgtttcc agatgctaag cttgtgttca acagcctctt agaggtgaat gatctaatgg 10560 cctccggaac acatccattg cctccttcag caatcatgag tggaggagat gacatagtct 10620 ccagagtgat agactttgaa tcaatctggg aaaaaccgtc tgacttgaga aacttggcca 10680 cctggagata cttccagtca gtccaaaaac aggtcaacat gtcttatgac ctcattattt 10740 gtgatgcaga agttactgac attgcatcta ttaatcggat aaccctgtta atgtctgatt 10800 ttgtgttgtc tatagatgga ccactttatt tggtcttcaa aacctatggg actatgctag 10860 taaacccaga ctatcaggct attcaacatc tgtcaagagc gttcccctca gtcacagggt 10920 ttataactca agtgacttcg tctttttcgt cagagctata tctccgattc tccaaacgag 10980 ggaagttttt tagagatgcc gagtatttga cctcttccac ccttcgggaa atgagccttg 11040 tgttattcaa ttgtagcagc cccaagagtg agatgcagag agctcgttcc ttaaactatc 11100 aagatcttgt aaggggtttc cctgaagaaa tcatatcaaa tccttacaat gagatgatca 11160 tcactctgat tgacagtgat gtagaatctt tcctagttca caagatggtg gatgatcttg 11220 agttacagag gggaaccttg tctaaggtgg ctatcattat agccatcatg atagttttct 11280 ccaacagagt cttcaacgtt tccaaacctt tgactgaccc cttgttctat ccaccgtctg 11340 atcccaaaat cctgaggcat ttcaacattt gttgcagtac tatgatgtat ctatctaccg 11400 ctttaggcga cgtccctagc ttcgcaagac ttcacgacct gtataacaga cccataactt 11460 attacttcag aaagcaagtc attcgaggga atatttatct atcttggagt tggtccgacg 11520 ataccccggt gttcaaaagg gtagcctgta attccagctt aagtctatct tctcactgga 11580 tcaggttgat ttacaagata gtgaagacta ccagactcgt tggcagcatc gaggacttat 11640 ctggagaggt ggaaagacat ctccgggggt acaacaggtg gatcaccctc gaggatatca 11700 gatctagatc atctctacta gattacagct gcttgtaagc cgagtactcc cggaaggctg 11760 cacatgctaa gactcttgtg cgatgtatct tgaaaaaa 11798 // ID MK598344; SV 1; linear; viral cRNA; STD; VRL; 11798 BP. XX AC MK598344; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Rabies lyssavirus isolate 1545, complete genome. XX KW . XX OS Rabies lyssavirus OC Viruses; Riboviria; Negarnaviricota; Haploviricotina; Monjiviricetes; OC Mononegavirales; Rhabdoviridae; Lyssavirus. XX RN [1] RP 1-11798 RA Forro B., Banyai K.; RT ; RL Submitted (05-MAR-2019) to the INSDC. RL New Pathogen Discovery, Institute for Veterinary Medical Research, Hungaria RL krt. 21., Budapest H-1143, Hungary XX DR MD5; 5041608d65a716e7b1e7d9584ecc9539. XX CC ##Assembly-Data-START## CC Assembly Method :: Geneious v. 9.1.8 CC Sequencing Technology :: IonTorrent CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..11798 FT /organism="Rabies lyssavirus" FT /host="red fox" FT /isolate="1545" FT /mol_type="viral cRNA" FT /country="Hungary" FT /collection_date="2009" FT /db_xref="taxon:11292" FT gene 17..1369 FT /gene="N" FT CDS 17..1369 FT /codon_start=1 FT /gene="N" FT /product="nucleoprotein" FT /protein_id="QDZ26192.1" FT /translation="MDVDKIVFKVNNQVVSLKPEIIVDQYEYKYPAIKDLKKPCITLGK FT APDLNKAYKSILSGMNAAKLDPDDVCSYLAAAMQFFEGTCPEDWTSYGILIARKGNKIT FT PDSLVEIKRTDVEGNWALTGGLELTRDPTVPEHASLVGLLLSLYRLSKISGQNTGNYKT FT NIADRIEQIFETAPFVKIVEHHTLMTTHKMCANWSTIPNFRFLAGTYDMFFSRIEHLYS FT AIRVGTVVTAYEDCSGLVSFTGFIKQINLTAREAILYFFHKNFEEEIRRMFEPGQETAV FT PHSYFIHFRSLGLSGKSPYSSNAVGHVFNLIHFVGCYMGQVRSLNATVIAACAPHEMSV FT LGGYLGEEFFGKGTFERRFFRDEKELQEYEAAELTKTDVALADDGTVNSDDEDYFSGET FT RSPEAVYTRIMMNGGRLKRSHIRRYVSVSSNHQARPNSFAEFLNKTYANDS" FT gene 1460..2353 FT /gene="P" FT CDS 1460..2353 FT /codon_start=1 FT /gene="P" FT /product="phosphoprotein" FT /protein_id="QDZ26193.1" FT /translation="MSKIFVNPSAIRAGLADLEMAEETVDLINRNIEDNQAHLQGEPIE FT VDNLPEDMRRLHLDEGKSSHLGEMAKAGEGRYREDFQMDEGEDPSLLFQSYLDNVGVQI FT VRQMRSGERFLKIWSQTVEEIISYVTVNFPNPPGRSSEDKSTQTVGRGPKKETTSNPSQ FT RESQPLKARMAAQAASGPPALEWSATNEEDDLSVEAEIAHQIAESFSKKYKFPSRSSGI FT FLYNFEQLKMNLDDIVKEAKNVPGVTRLAHDGSKLPLRCVLGWVALANSKKFQLLVEAD FT KLSKIMQDDLNRYASC" FT gene 2442..3050 FT /gene="M" FT CDS 2442..3050 FT /codon_start=1 FT /gene="M" FT /product="matrix protein" FT /protein_id="QDZ26194.1" FT /translation="MNFLRKIVKNCRDEDTQKPSPASAPPDDDDLWLPPPEYIPLKELT FT SRKNMRNFCINGEVKVCSPNGYSFRILRHILRSFDEIYSGNHRMIGLVKVVIGLALSGA FT PVPEGMNWVYKLRRTLIFQWADSRGPLEGEELEYSQEITWDDDTEFVGLQIRVSARQCH FT IQGRIWCINMNSRACQLWSDMSLQTQRSEEDKDSSLLLE" FT gene 3262..4836 FT /gene="G" FT CDS 3262..4836 FT /codon_start=1 FT /gene="G" FT /product="glycoprotein" FT /protein_id="QDZ26195.1" FT /translation="MVPQALLFVPLLVFSLCFGKFPIYTIPDKIGPWSPIDIHHLSCPN FT NLVVEDEGCTNLSGFSYMELKVGYISAIKVNGFTCTGVVTEAETYTNFVGYVTTTFKRK FT HFRPTPDACRAAYNWKMAGDPRYEESLHNPYPDYHWLRTVKTTKESLVIISPSVADLDP FT YDKSLHSRVFPGGKCSGITVSSTYCSTNHDYTIWLPENPRLGTSCDIFTNSRGKRASKG FT SKTCGFVDERGLYKSLKGACKLKLCGVLGLRLMDGTWVAMQTSDEAKWCPPDQLVNLHD FT FRSDEIEHLVVEELVKKREECLDALESIMTTKSVSFRRLSHLRKLVPGFGKAYTIFNKT FT LMEADAHYKSVRTWNEIIPSKGCLRVGGRCHPHVNGVFFNGIILGPDGHVLIPEMQSSL FT LQQHMELLESSVIPLMHPLADPSAVFKDGDEAEDFVEVHLPDVHKQVSGVDLGIPNWGK FT YVLLSAGALIALMLIIFLMTCCRRVNRPEPTQRSFGGTRRKVSITSQGGKVISSWESYK FT SGGETRL" FT gene 5355..11738 FT /gene="L" FT CDS 5355..11738 FT /codon_start=1 FT /gene="L" FT /product="RNA dependent RNA polymerase" FT /protein_id="QDZ26196.1" FT /translation="MLDPGEVYDDPIDPVDSEAEPRGAPTVPNILRNSDYNLNSPLIED FT PARLMLEWLKTGNRPYRMTLTDNGSRSYKVLKDYLKKVDLGSLKVGGTAAQSMISLWLY FT SAHSESNRSRRCITDLAHFYSKSSPIEKLLNCTLGNRGLKIPPKGVLSCLERVDYDKAF FT GRYLANTYSSYLFFHVITLYMNALDWDEEKTILALWKDLTSVDIGKDLVKFKDQIWGLL FT IVTKDFVYSQSSNCLFDRDYTLMLKDLFLSRFNSLMILLSPPEPRYSDDLISQLCQLYI FT AGDQVLSMCGNSGYEVIKILEPYVVNSLVQRAEKFRPLIHSLGDFPVFIKDKVSQLEGT FT FGPSAKRFFRVLDQFDNIHDLVFVYGCYRHWGHPYIDYRKGLSKLYDQVHIKKVIDKSY FT QECLASDLARRILRWGFDKYSKWYLDSRFLARDHPLTPYIKTQTWPPKHIVDLVGDTWH FT KLPIMQIFEIPESMDPSEILDDKSHSFTRTRLASWLSENRGGPVPSEKVIITALSKPPV FT NPREFLKSVDLGGLPDEDLIIGLKPKERELKIEGRFFALMSWNLRLYFVITEKLLANYI FT LPLFDALTMTDNLNKVFKKLIDRVTGQGLLDYSRVTYAFHLDYEKWNNHQRLESTEDVF FT SVLDQVFGLKRVFSRTHEFFQKSWIYYSDRSDLIGLWEDQIYCLDMSNGPTCWNGQDGG FT LEGLRQKGWSLVSLLMIDRESQTRNTRTKILAQGDNQVLCPTYMLSPGLSREGLLYELE FT SISRNALSIYRAIEEGASKLGLIIKKEETMCSYDFLIYGKTPLFRGNILVPESKRWARV FT SCISNDQIVNLANIMSTVSTNALTVAQHSQSLIKPMRDFLLMSVQAVFHYLLFSPILKG FT RVYKILSAEGENFLLAMSRIIYLDPSLGGVSGMSLGRFHIRQFSDPVSEGLSFWREIWL FT SSHESWIHALCQEAGNPDLGERTLESFTRLLEDPTTLNIKGGASPTILLKDAIRKALYD FT EVDKVENSEFREAILLSKTHRDNFILFLKSVEPLFPRFLSELFSSSFLGIPESIIGLIQ FT NSRTIRRQFRKSLSRTLEESFYNSEIHGINRMTQTPQRVGRVWPCSSERADLLREISWG FT RKVVGTTVPHPSEMLGLLPKSSISCTCGAIGGGNPRVSVSVLPSFDQSFFSRGPLKGYL FT GSSTSMSTQLFHAWEKVTNVHVVKRALSLKESINWFITRNSNLAQTLIRNIMSLTGPDF FT PLEEAPVFKRTGSALHRFKSARYSEGGYSSVCPNLLSHISVSTDTMSDLTQDGKNYDFM FT FQPLMLYAQTWTSELVQRDTRLRDSTFHWHLRCNRCVRPIDDITLETPQIFEFPDVSKR FT ISRMVSGAVPHFQKLPDIRLRPGDFESLSGREKSRHIGSAQGLLYSILVAIHDSGYNDG FT TIFPVNIYGRVSPRDYLRGLARGVLIGSSICFLTRMTNININRPLELISGVISYILLRL FT DNHPSLYIMLREPSLRGEIFSIPQKIPAAYPTTMKEGNRSILCYLQHVLRYEREVITAS FT PENDWLWIFSDFRSAKMTYLTLITYQSHLLLQRVEKNLSKSMRANLRQMSSLMRQVLGG FT HGEDTLESDDDIQRLLKDSLRRTRWVDQEVRHAARTMTGDYSPNKKVSRKAGCSEWVCS FT AQQVAVSTSANPAPVSELDTRALSKRFQNPLISGLRVVQWATGAHYKLKPILDDLNVFP FT SLCLVVGDGSGGISRAVLNMFPDAKLVFNSLLEVNDLMASGTHPLPPSAIMSGGDDIVS FT RVIDFESIWEKPSDLRNLATWRYFQSVQKQVNMSYDLIICDAEVTDIASINRITLLMSD FT FALSIDGPLYLVFKTYGTMLVNPDYKAIQHLSRAFPSVTGFITQVTSSFSSELYLRFSK FT RGKFFRDAEYLTSSTLREMSLVLFNCSSPKSEMQRARSLNYQDLVRGFPEEIISNPYNE FT MIITLIDSDVESFLVHKMVDDLELQRGTLSKVAIIIAIMIVFSNRVFNVSKPLTDPLFY FT PPSDPKILRHFNICCSTMMYLSTALGDVPSFARLHDLYNRPITYYFRKQVIRGNIYLSW FT SWSDDTPVFKRVACNSSLSLSSHWIRLIYKIVKTTRLVGSIEDLSGEVERHLHGYNRWI FT TLEDIRSRSSLLDYSCL" XX SQ Sequence 11798 BP; 3334 A; 2591 C; 2771 G; 3102 T; 0 other; atgtaacacc cctacaatgg atgtcgacaa gattgtattc aaagtcaata atcaggtggt 60 ctctttaaag ccagagatta tcgtggatca atatgagtac aagtacccag ctatcaaaga 120 tttgaaaaag ccctgtataa ccctagggaa agcccccgac ttaaacaaag catacaagtc 180 aatcttatca ggcatgaatg cagccaaact tgatcctgat gatgtatgtt cctacttggc 240 agcagcaatg cagttctttg aggggacgtg tccagaggac tggaccagct atggaatctt 300 gatcgcacga aaaggaaaca agatcacccc ggattctctg gtggaaataa agcgcactga 360 tgtagaagga aattgggctc tgacaggagg cttggaactg acaagggacc ccactgtccc 420 cgagcatgcg tctttagttg gtcttctctt gagtctgtat aggttgagca aaatatcagg 480 acaaaacact ggtaactata aaacaaacat cgcagatagg atagagcaga ttttcgagac 540 agcccctttt gttaaaatcg tggaacacca tactctaatg acaactcaca aaatgtgtgc 600 caattggagt actataccga atttcagatt tttggccggg acctacgaca tgtttttctc 660 tcggattgag catctatatt cggcaatcag agtgggcacg gttgttactg cttatgaaga 720 ctgttcaggt ctggtatcgt ttactgggtt cataaagcag atcaatctca ctgcaaggga 780 agcaatacta tacttcttcc acaagaactt tgaggaagag ataagaagaa tgttcgagcc 840 agggcaggag acagctgttc ctcactccta tttcattcac ttccgttcat taggtttgag 900 tgggaagtct ccttattcat cgaatgccgt tggtcatgtg ttcaatctca ttcactttgt 960 tggatgctat atgggtcaag tcagatccct aaacgcaaca gtcattgctg catgtgctcc 1020 tcatgagatg tctgttctag ggggctatct aggagaggaa ttcttcggaa aaggaacatt 1080 cgaaagaagg ttcttcagag atgagaaaga acttcaagaa tacgaggcgg ctgaactgac 1140 aaagaccgac gtggcattgg cagatgatgg aactgtcaac tctgacgatg aggactactt 1200 ctccggtgaa accagaagtc cagaagccgt gtatactcga attatgatga atggaggtcg 1260 actaaagaga tcgcatataa ggagatatgt ctcagtcagt tcgaatcatc aagctcgtcc 1320 aaactcattt gcggagtttc taaacaagac atatgcgaac gactcatgag gagttgaata 1380 acagtgtgcc agaaacctgt cgattgtgga tatccatcat gaaaaaaact aacacccctc 1440 ctttcgaacc gtcccaaata tgagcaagat tttcgtcaat ccgagtgcta tcagagcagg 1500 tctggccgat cttgagatgg ctgaagagac tgttgatctg atcaatagaa acatagaaga 1560 caatcaggct catctccagg gggaacccat agaagtggac aatctccctg aggacatgcg 1620 gcgacttcac ctggatgagg gaaaatcgtc ccacctcggt gagatggcca aagcaggaga 1680 aggcaggtat cgagaggact ttcagatgga tgaaggagag gaccctagcc tcctgttcca 1740 gtcatacctg gacaatgttg gagtccaaat agtcagacaa atgaggtcag gagagagatt 1800 cctcaagata tggtcacaga ctgtagaaga gattatatcc tatgtcacgg tcaactttcc 1860 caaccctcca gggaggtcct cagaggacaa atctacccaa actgttggtc gagggcccaa 1920 aaaggagaca acatccaatc cttctcagag agaaagccaa cctttgaaag ccaggatggc 1980 ggctcaagct gcctctggcc ctccagccct tgaatggtct gctaccaatg aggaagatga 2040 tctatcagta gaggctgaga ttgctcacca aattgctgaa agcttttcca agaagtacaa 2100 gtttccctct cgatcctcag ggatattcct gtataatttt gagcagctga agatgaacct 2160 tgatgatata gttaaggagg caaaaaatgt gccaggcgtg acccgtttag ctcatgacgg 2220 atccaaactc cccctaagat gtgtgctggg atgggttgct ttagccaatt ccaagaaatt 2280 ccaattgtta gtagaggctg acaagctaag taaaatcatg caggatgatt tgaatcgcta 2340 tgcatcctgc taaacgaact tctaaactcg gttcctctag ataataaaat ctgagatgtc 2400 ctagagtcaa catgaaaaaa acaggcaaca ccactgataa aatgaacttt ctacgcaaga 2460 tagtgaaaaa ctgtagggat gaggacactc aaaaaccctc tcccgcgtca gcccctccgg 2520 atgacgatga cctgtggctt ccaccccctg aatacatccc gctgaaagaa ctcacaagca 2580 ggaagaacat gaggaacttt tgtatcaacg gggaggttaa agtgtgtagc ccgaatggtt 2640 actcgttcag gatcctgcgg cacattctga gatcattcga cgagatatac tctgggaatc 2700 ataggatgat tggattggtc aaagttgtca ttggactagc tttgtcagga gctccggtcc 2760 ctgagggcat gaactgggtg tacaaactga ggagaaccct tatcttccaa tgggctgatt 2820 ccaggggtcc tcttgaaggg gaggagttgg aatattcaca ggagatcact tgggatgatg 2880 atactgagtt cgtcggattg caaatcagag tgagtgcaag acaatgtcat atccagggca 2940 gaatctggtg tatcaacatg aactcaagag catgtcagct atggtctgac atgtctcttc 3000 agacacaaag gtccgaagag gacaaagact cctctctgct tctagaataa tcagattata 3060 tcctgcaagt ttatcacttg tatacctctg gaggagagaa catacgagct tgactccaac 3120 ccttgggagc aatagaacaa aaacatgtta tggtgccatt aaaccgctgc attttatcaa 3180 agtcaagtta attaccttta cattttgagc ctcttggatg tgaaaaaaac tattaacatc 3240 cctcaaaaga cttaaggaaa gatggttcct caggctcttt tgtttgtacc ccttctggtt 3300 ttttccttgt gtttcgggaa attccctatt tacacgatac cagacaaaat tggtccttgg 3360 agtcctattg acatacatca tctcagctgc ccaaacaatt tggttgtaga ggacgaagga 3420 tgcaccaacc tgtcagggtt ctcctacatg gaacttaaag ttggatacat ctcagccata 3480 aaagtgaacg ggtttacttg cacgggcgtt gtgacagagg cagaaaccta cactaacttt 3540 gttggttatg tcaccaccac gttcaaaagg aagcatttcc gtccaacccc agatgcatgt 3600 agagctgcgt acaactggaa gatggccggt gaccccagat atgaggagtc tctacataat 3660 ccgtaccctg actaccattg gcttcgaact gtaaaaacca ccaaggagtc tctcgttatc 3720 atatccccaa gtgtggcaga tttagaccca tatgacaaat ctcttcactc gagggtcttc 3780 cctggtggaa agtgctcagg aataacggtg tcttctacct actgctcaac taaccacgat 3840 tacaccattt ggctgcccga gaatccgaga ctagggacgt cttgtgacat ttttaccaat 3900 agtagaggga agagagcctc caaagggagt aagacctgtg gctttgtaga tgagagaggc 3960 ttgtataagt cgctaaaagg agcatgcaaa ctcaagttat gtggagttct tggacttaga 4020 cttatggatg gaacatgggt cgcgatgcaa acgtcagatg aagccaaatg gtgccctcct 4080 gatcagttgg tgaatctgca cgactttcgc tcggatgaaa ttgagcacct tgttgtagaa 4140 gagctggtca agaaaagaga ggagtgtctg gatgcactag aatccatcat gaccaccaaa 4200 tcagtgagtt tcagacgtct cagtcattta agaaagcttg tccctgggtt tggaaaagca 4260 tataccatat tcaacaagac cttgatggag gctgatgctc actacaagtc agtccgaaca 4320 tggaatgaga tcatcccctc aaaagggtgt ttaagagttg gagggaggtg tcatcctcat 4380 gtgaacgggg tgtttttcaa tggtataata ttagggcctg acggccatgt tctaatccca 4440 gagatgcaat catccctcct tcagcaacat atggagttgt tggaatcctc agtcattccc 4500 ctgatgcacc ccctggcaga cccgtccgca gttttcaagg acggtgatga ggctgaggat 4560 tttgttgaag ttcacctccc cgatgtgcac aaacaggtct caggggttga cctgggcatc 4620 ccaaactggg ggaagtatgt attactgagt gcaggggccc tgattgcctt gatgttgata 4680 attttcctaa tgacatgttg cagaagagtc aatcgaccag aacctacgca gcgcagtttc 4740 ggagggacaa ggaggaaggt gtcgatcact tcccaaggcg ggaaggtcat atcttcatgg 4800 gagtcatata agagtggggg tgagactaga ctgtgaaggc tggccatcct ttcgacgctt 4860 caagtcctga agatcacctc tccttggggt tggagggaat ctctgggttc aatggtcctc 4920 cttgaactcc gtgcaacagg gtagattcaa gagtcatgag actttcatta atcatctcag 4980 ttgatcaaat taggtcatgt agattctcat aatacgggaa atcttctagc agtttcagtg 5040 accaacggtg ctttcatttt cccggaactg gtaccaaagg ttatggacgg gccgagaggt 5100 atttcggatg actccgtgcc tgggcacaga caggggtcac agcgagtcct atgatagcgg 5160 actcagcatg agtttattga gaaaggcaag ctgcctccca tgaaggacat aagcaatagt 5220 tcacaatcat cttgcatctc ggcaaagtgt gcataattat aaagggctgg gtcatctaag 5280 cttttcagtc gagaaaaaaa ctgtagacca aaagagcaac cggtaacact tctcatccta 5340 aagcctacat caagatgcta gatccagggg aggtctatga tgaccccatt gatccagtcg 5400 attcggaggc tgagcccaga ggagccccca ctgtccctaa catcttgaga aactctgact 5460 acaatctcaa ttcccctttg atagaagacc ctgcaagact aatgttggaa tggttgaaaa 5520 cagggaatag accttatcgg atgactctta cagacaatgg ctccaggtct tacaaagtgt 5580 tgaaagatta tctcaagaaa gtagatctgg gttctctgaa agtgggcggg actgctgcac 5640 agtcaatgat ttctctttgg ttatacagcg cccactctga atcaaacagg agccggaggt 5700 gtataacaga cttggctcat ttctactcca agtcatcccc catagagaag ctgttaaatt 5760 gtactctagg aaatagaggg ctgaaaatcc cccctaaggg ggtgttaagt tgccttgaga 5820 gggtcgatta tgataaggca tttgggaggt atcttgccaa cacgtattcc tcttatttgt 5880 ttttccatgt aatcacccta tatatgaatg ccctagactg ggacgaagaa aaaaccatct 5940 tagcattatg gaaagatctg acctcagtgg acatcgggaa ggacttggtc aagttcaaag 6000 atcaaatatg gggactgctg attgtgacaa aagactttgt ttactctcag agttctaact 6060 gcctttttga tagagactat acacttatgc taaaagatct ttttttgtct cgcttcaact 6120 ccttaatgat cttgctctcc ccccccgagc ctcgatactc agacgacttg atatctcagc 6180 tgtgccagct atacatcgct ggggatcagg tcttgtccat gtgtggaaac tccggctatg 6240 aagtcattaa aatattggag ccatatgtcg tgaacagttt agtccagaga gcagaaaagt 6300 ttaggcctct tattcattcc ctgggagact ttcctgtatt tataaaagac aaggtgagtc 6360 agcttgaagg gacttttggt cccagtgcaa aaaggttttt tagggttctg gatcagttcg 6420 acaacataca tgatttagtt tttgtgtatg gctgttacag gcattggggg cacccctaca 6480 tagattaccg aaagggtcta tcgaaactat atgatcaagt tcacatcaaa aaagtgatag 6540 acaagtccta ccaggagtgt ttggcaagcg acctagccag gaggatcctt agatgggggt 6600 ttgataagta ctccaagtgg tatctggatt cgcgattcct tgcccgagac caccccttga 6660 ctccttatat caaaacccag acctggccac ccaaacatat agtagacttg gtgggggata 6720 cctggcacaa gctcccgatc atgcaaatct ttgagattcc tgaatcaatg gacccgtcag 6780 aaatactgga tgacaaatca cattcattca ccagaacaag actagcttct tggctgtcag 6840 agaaccgagg agggcctgtt cctagtgaga aagttattat cacggccttg tctaagccgc 6900 ctgtcaatcc ccgagagttt ttgaaatctg tagacctcgg aggattgcca gatgaggact 6960 taataatagg cctcaagcca aaggagcgag aattgaagat tgagggtaga ttctttgctc 7020 tgatgtcatg gaatctaaga ttgtattttg tcatcaccga aaagctcctg gctaactata 7080 tcttgccact ttttgacgca ctgaccatga cagacaacct gaacaaggtg tttaaaaagt 7140 tgatcgacag ggtcactggt caagggcttt tggactattc gagggttaca tatgcatttc 7200 atttggacta cgagaagtgg aacaatcatc aaagattaga gtcaacagag gatgtgttct 7260 ctgtcctgga tcaggtgttt ggattgaaga gagtgttttc tagaacacat gagttttttc 7320 agaagtcctg gatctattat tcagacagat cagacctcat cgggttatgg gaggatcaaa 7380 tatactgctt ggatatgtcc aacggcccaa cttgctggaa tggccaggac ggcgggctag 7440 agggcttacg gcagaaggga tggagtctag tcagcttatt gatgatagat agagaatccc 7500 aaaccaggaa cacgagaact aaaatactag ctcaaggaga caaccaggtt ctatgtccga 7560 catatatgtt gtcgccgggg ctgtctagag aggggctcct ctatgagtta gagagcatat 7620 caaggaatgc actttcaata tatcgagcca tcgaggaagg ggcatctaaa ctagggctga 7680 tcatcaagaa ggaggagacc atgtgtagtt atgactttct catttatggg aaaactccct 7740 tgtttcgagg taacatattg gtgcctgagt ccaaaagatg ggccagagtc tcttgcatct 7800 ctaatgacca gatagtcaac ctcgccaata taatgtcgac agtgtccacc aatgcactga 7860 cagtggcaca acactctcaa tctttgatca agcctatgag ggattttctg ctcatgtcag 7920 tgcaggcagt ctttcactac ctgttgttta gcccaatctt aaagggcaga gtttacaaaa 7980 ttttgagtgc tgaaggggag aactttctcc tagccatgtc gaggataatc tatctagacc 8040 cttctttggg aggggtgtct ggaatgtctc ttggaaggtt tcatatacgc caattctcag 8100 accctgtctc tgaagggttg tccttctgga gagagatctg gttaagctcc cacgagtcct 8160 ggattcatgc gttgtgtcaa gaggctggga acccagatct tggagagagg acactagaga 8220 gcttcactcg ccttctagaa gatcctacca ccttaaatat aaaaggaggt gcaagtccta 8280 ccattctact caaggatgcg atcagaaagg ctctgtatga cgaagtggac aaggtggaaa 8340 attcagagtt tcgagaggct atcctattgt ccaagaccca tagagataac ttcatactct 8400 tcttaaagtc tgttgagcct ctgtttcctc gatttctcag tgagctcttc agctcgtctt 8460 tcttggggat ccccgagtcg atcattggac tgatacaaaa ctcccggacg ataagaagac 8520 agtttagaaa gagcctctca agaactttag aagaatcgtt ctacaactca gagatccatg 8580 ggattaatcg gatgacccag acacctcaaa gggtcgggag ggtgtggcct tgctcttcag 8640 agagggcaga tctacttagg gagatctctt ggggaagaaa agtggtaggc acaacagttc 8700 ctcacccttc tgagatgttg gggttacttc ccaaatcctc catttcttgc acttgtggag 8760 caataggagg aggcaatcct agagtttctg tatcagtact cccgtccttc gaccagtcat 8820 tcttttcacg gggtccccta aagggatact tgggctcgtc aacctctatg tcaacccagc 8880 tattccatgc atgggaaaaa gtcactaatg ttcatgtggt gaagagggcc ctatcgttaa 8940 aagaatctat aaactggttc attactagaa actccaattt ggctcaaact ctaattagga 9000 acattatgtc tctgacaggc cccgatttcc ctctagagga ggcccctgtt ttcaaaagga 9060 cagggtcagc cttgcatagg ttcaagtctg ccagatacag tgaaggagga tattcttctg 9120 tttgcccgaa cctcctctcc catatctctg ttagtacaga cactatgtct gatttgactc 9180 aagacgggaa gaactacgac ttcatgtttc agccattgat gctttatgcg cagacatgga 9240 catcagagct ggtacagaga gacacaaggc tgagggattc tacgtttcat tggcacctcc 9300 ggtgcaacag gtgtgtaagg cccattgacg atataacact ggagactcct cagatcttcg 9360 agttcccgga tgtgtcaaaa agaatatcca gaatggtttc tggggctgtg cctcacttcc 9420 agaagcttcc tgatattcgt ctgagaccag gtgattttga gtctctaagt ggtagggaaa 9480 agtctcgcca tatagggtcg gctcagggac tcttatactc aattttagtg gcaattcacg 9540 actcaggata caatgatgga accatcttcc ctgtcaacat ttacggcaga gtctccccta 9600 gagattattt gagagggctc gcgagaggag tcttgatagg atcttcaatt tgcttcttga 9660 caagaatgac aaatatcaac attaatagac ctcttgagtt gatctcagga gtaatctcat 9720 atatcctcct gaggttagat aaccacccct ccctgtacat aatgctcaga gaaccgtctc 9780 ttagaggaga aatattttct atccctcaga aaatcccagc cgcttatccg accactatga 9840 aagaaggcaa cagatcgatc ttgtgttatc tccaacatgt gctacgctat gagcgagagg 9900 tgatcacggc gtccccagag aatgactggc tgtggatctt ctcagacttt agaagtgcta 9960 agatgacgta cctgaccctc attacttacc agtctcacct cctactccag agggttgaga 10020 aaaacttgtc taagagtatg agagctaacc tgcgacaaat gagctccttg atgaggcagg 10080 tgctgggtgg gcatggagaa gatactttag agtccgacga cgacattcaa agattactaa 10140 aagactctct gcgaagaaca aggtgggtgg atcaagaggt gcgccatgca gctagaacca 10200 tgactggaga ttatagcccc aacaagaaag tgtctcgtaa ggcaggatgt tcagaatggg 10260 tttgctctgc tcaacaggtt gcagtctcca catcggcaaa cccagcccct gtctcagagc 10320 ttgacacaag ggccctctct aagagatttc aaaacccttt gatctcaggc ttgagggtgg 10380 ttcagtgggc aaccggcgcc cattataagc ttaagcccat tctagacgat cttaatgttt 10440 tcccatccct ctgtcttgtg gttggggacg ggtcaggggg gatatcaagg gcagttctta 10500 acatgtttcc agatgctaag cttgtgttca acagcctctt agaggtgaat gatctaatgg 10560 cctccggaac acatccattg cctccttcag caatcatgag tggaggagat gacatagtct 10620 ccagagtgat agatttcgaa tcaatctggg aaaaaccgtc tgacttgaga aacttggcca 10680 cctggagata cttccagtca gtccaaaaac aggtcaacat gtcttatgac ctcattattt 10740 gtgatgcaga agttactgac attgcatcta ttaatcggat aaccctgtta atgtctgatt 10800 ttgcgttgtc tatagatgga ccactttatt tggtcttcaa aacctatggg actatgctag 10860 taaacccgga ctataaggct attcaacatc tgtcaagagc gttcccctca gtcacagggt 10920 ttataactca agtgacttcg tccttttcgt cagagctata tctccgattc tccaaacgag 10980 ggaagttttt tagagatgcc gagtatttga cctcttccac ccttcgggaa atgagccttg 11040 tgttattcaa ttgtagcagc cccaagagtg agatgcagag agctcgttcc ttaaactatc 11100 aagatcttgt aaggggtttc cctgaagaaa tcatatcaaa tccttacaat gagatgatca 11160 tcactctgat tgacagtgat gtagaatctt tcctagttca caagatggtg gatgatctcg 11220 agttacagag gggaaccttg tctaaggtgg ctatcattat agccatcatg atagttttct 11280 ccaacagagt cttcaacgtc tccaaacctt tgactgaccc cttgttctat ccaccgtctg 11340 atcccaaaat cctgaggcat ttcaacattt gttgcagtac tatgatgtat ctatctactg 11400 ctttaggcga cgtccctagc ttcgcaagac ttcacgacct gtataacaga cccataactt 11460 attacttcag aaagcaagtc attcgaggga atatttatct atcttggagt tggtccgacg 11520 ataccccagt gttcaaaagg gtagcctgta attccagctt aagtctatct tctcactgga 11580 tcaggttgat ttacaagata gtgaagacta ccagactcgt tggcagcatc gaggacttat 11640 ctggagaggt ggaaagacat ctccatgggt acaacaggtg gatcaccctc gaggatatca 11700 gatctagatc atctctacta gactacagct gcttgtaaac cgagtactcc cggaaggctg 11760 cacatgctaa aactcttgtg cgatgtatct tgaaaaaa 11798 // ID MK598345; SV 1; linear; viral cRNA; STD; VRL; 11798 BP. XX AC MK598345; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Rabies lyssavirus isolate 2690, complete genome. XX KW . XX OS Rabies lyssavirus OC Viruses; Riboviria; Negarnaviricota; Haploviricotina; Monjiviricetes; OC Mononegavirales; Rhabdoviridae; Lyssavirus. XX RN [1] RP 1-11798 RA Forro B., Banyai K.; RT ; RL Submitted (05-MAR-2019) to the INSDC. RL New Pathogen Discovery, Institute for Veterinary Medical Research, Hungaria RL krt. 21., Budapest H-1143, Hungary XX DR MD5; b6b6c3d8eae1c1aa1978b80394fc9c64. XX CC ##Assembly-Data-START## CC Assembly Method :: Geneious v. 9.1.8 CC Sequencing Technology :: IonTorrent CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..11798 FT /organism="Rabies lyssavirus" FT /host="red fox" FT /isolate="2690" FT /mol_type="viral cRNA" FT /country="Hungary" FT /collection_date="2010" FT /db_xref="taxon:11292" FT gene 17..1369 FT /gene="N" FT CDS 17..1369 FT /codon_start=1 FT /gene="N" FT /product="nucleoprotein" FT /protein_id="QDZ26197.1" FT /translation="MDADKIVFKVNNQVVSLKPEIIVDQYEYKYPAIKDLKKPCITLGK FT APDLNKAYKSILSGMNAAKLDPDDVCSYLAAAMQFFEGTCPEDWTSYGILIARKGNKIT FT PDSLVEIKRTDVEGNWALTGGLELTRDPTVPEHASLVGLLLSLYRLSKISGQNTGNYKT FT NIADRIEQIFETAPFVKIVEHHTLMTTHKMCANWSTIPNFRFLAGTYDMFFSRIEHLYS FT AIRVGTVVTAYEDCSGLVSFTGFIKQINLTAREAILYFFHKNFEEEIRRMFEPGQETAV FT PHSYFIHFRSLGLSGKSPYSSNAVGHVFNLIHFVGCYMGQVRSLNATVIAACAPHEMSV FT LGGYLGEEFFGKGTFERRFFRDEKELQEYEAAELTKTDVALADDGTVNSDDEDYFSGET FT RSPEAVYTRIMMNGGRLKRSHIRRYVSVSSNHQARPNSFAEFLNKTYANDS" FT gene 1460..2353 FT /gene="P" FT CDS 1460..2353 FT /codon_start=1 FT /gene="P" FT /product="phosphoprotein" FT /protein_id="QDZ26198.1" FT /translation="MSKIFVNPSAIRAGLADLEMAEETVDLINRNIEDNQAHLQGEPIE FT VDNLPEDMRRLHLDEGKSSHLGEMAKAGEGRYREDFQMDEGEDPSLLFQSYLDNVGVQI FT VRQMRSGERFLKIWSQTVEEIISYVTVNFPNPPGRSSEDKSTQTVGRGPKKETTSNPSQ FT RESQPLKARMAAQAASGPPALEWSATNEEDDLSVEAEIAHQIAESFSKKYKFPSRSSGI FT FLYNFEQLKMNLDDIVKEAKNVPGVTRLAHDGSKLPLRCVLGWVALANSKKFQLLVEAD FT KLSKIMQDDLNRYASC" FT gene 2442..3050 FT /gene="M" FT CDS 2442..3050 FT /codon_start=1 FT /gene="M" FT /product="matrix protein" FT /protein_id="QDZ26199.1" FT /translation="MNFLRKIVKNCRDEDTQKPSPASAPPDDDDLWLPPPEYIPLKELT FT SRKNMRNFCINGEVKVCSPNGYSFRILRHILRSFDEIYSGNHRMIGLVKVVIGLALSGA FT PVPEGMNWVYKLRRTLIFQWADSRGPLEGEELEYSQEITWDDDTEFVGLQIRVSARQCH FT IQGRIWCINMNSRACQLWSDMSLQTQRSEEDKDSSLLLE" FT gene 3262..4836 FT /gene="G" FT CDS 3262..4836 FT /codon_start=1 FT /gene="G" FT /product="glycoprotein" FT /protein_id="QDZ26200.1" FT /translation="MVPQALLFVPLLVFSLCFGKFPIYTIPDKIGPWSPIDIHHLSCPN FT NLVVEDEGCTNLSGFSYMELKVGYISAIKVNGFTCTGVVTEAETYTNFVGYVTTTFKRK FT HFRPTPDACRAAYNWKMAGDPRYEESLHNPYPDYHWLRTVKTTKESLVIISPSVADLDP FT YDKSLHSRVFPGGKCSGITVSSTYCSTNHDYTIWLPENPRLGTSCDIFTNSRGKRASKG FT SKTCGFVDERGLYKSLKGACKLKLCGVLGLRLMDGTWVAMQTSDEAKWCPPDQLVNLHD FT FRSDEIEHLVVEELVKKREECLDALESIMTTKSVSFRRLSHLRKLVPGFGKAYTIFNKT FT LMEADAHYKSVRTWNEIIPSKGCLRVGGRCHPHVNGVFFNGIILGPDGHVLIPEMQSSL FT LQQHMELLESSVIPLMHPLADPSAVFKDGDEAEDFVEVHLPDVHKQVSGVDLGIPNWGK FT YVLLSAGALIALMLIIFLMTCCRRVNRPEPTQRSFGGTRRKVSITSQGGKVISSWESYK FT SGGETRL" FT gene 5355..11738 FT /gene="L" FT CDS 5355..11738 FT /codon_start=1 FT /gene="L" FT /product="RNA dependent RNA polymerase" FT /protein_id="QDZ26201.1" FT /translation="MLDPGEVYDDPIDPVDSEAEPRGAPTVPNILRNSDYNLNSPLIED FT PARLMLEWLKTGNRPYRMTLTDNGSRSYKVLKDYLKKVDLGSLKVGGTAAQSMISLWLY FT SAHSESNRSRRCITDLAHFYSKSSPIEKLLNCTLGNRGLKIPPKGVLSCLERVDYDKAF FT GRYLANTYSSYLFFHVITLYMNALDWDEEKTILALWKDLTSVDIGKDLVKFKDQIWGLL FT IVTKDFVYSQSSNCLFDRNYTLMLKDLFLSRFNSLMILLSPPEPRYSDDLISQLCQLYI FT AGDQVLSMCGNSGYEVIKILEPYVVNSLVQRAEKFRPLIHSLGDFPVFIKDKVSQLEGT FT FGPSAKRFFRVLDQFDNIHDLVFVYGCYRHWGHPYIDYRKGLSKLYDQVHIKKVIDKSY FT QECLASDLARRILRWGFDKYSKWYLDSRFLARDHPLTPYIKTQTWPPKHIVDLVGDTWH FT KLPIMQIFEIPESMDPSEILDDKSHSFTRTRLASWLSENRGGPVPSEKVIITALSKPPV FT NPREFLKSVDLGGLPDEDLIIGLKPKERELKIEGRFFALMSWNLRLYFVITEKLLANYI FT LPLFDALTMTDNLNKVFKKLIDRVTGQGLLDYSRVTYAFHLDYEKWNNHQRLESTEDVF FT SVLDQVFGLKRVFSRTHEFFQKSWIYYSDRSDLIGLWEDQIYCLDMSNGPTCWNGQDGG FT LEGLRQKGWSLVSLLMIDRESQTRNTRTKILAQGDNQVLCPTYMLSPGLSREGLLYELE FT SISRNALSIYRAIEEGASKLGLIIKKEETMCSYDFLIYGKTPLFRGNILVPESKRWARV FT SCISNDQIVNLANIMSTVSTNALTVAQHSQSLIKPMRDFLLMSVQAVFHYLLFSPILKG FT RVYKILSAEGENFLLAMSRIIYLDPSLGGVSGMSLGRFHIRQFSDPVSEGLSFWREIWL FT SSHESWIHALCQEAGNPDLGERTLESFTRLLEDPTTLNIKGGASPTILLKDAIRKALYD FT EVDKVENSEFREAILLSKTHRDNFILFLKSVEPLFPRFLSELFSSSFLGIPESIIGLIQ FT NSRTIRRQFRKSLSRTLEESFYNSEIHGINRMTQTPQRVGRVWPCSSERADLLREISWG FT RKVVGTTVPHPSEMLGLLPKSSISCTCGAIGGGNPRVSVSVLPSFDQSFFSRGPLKGYL FT GSSTSMSTQLFHAWEKVTNVHVVKRALSLKESINWFITRNSNLAQTLIRNIMSLTGPDF FT PLEEAPVFKRTGSALHRFKSARYSEGGYSSVCPNLLSHISVSTDTMSDLTQDGKNYDFM FT FQPLMLYAQTWTSELVQRDTRLRDSTFHWHLRCNRCVRPIDDITLETPQIFEFPDVSKR FT ISRMVSGAVPHFQKLPDIRLRPGDFESLSGREKSRHIGSAQGLLYSILVAIHDSGYNDG FT TIFPVNIYGRVSPRDYLRGLARGVLIGSSICFLTRMTNININRPLELISGVISYILLRL FT DNHPSLYIMLREPSLRGEIFSIPQKIPAAYPTTMKEGNRSILCYLQHVLRYEREVITAS FT PENDWLWIFSDFRSAKMTYLTLITYQSHLLLQRVEKNLSKSMRANLRQMSSLMRQVLGG FT HGEDTLESDDDIQRLLKDSLRRTRWVDQEVRHAARTMTGDYSPNKKVSRKAGCSEWVCS FT AQQVAVSTSANPAPVSELDTRALSKRFQNPLISGLRVVQWATGAHYKLKPILDDLNVFP FT SLCLVVGDGSGGISRAVLNMFPDAKLVFNSLLEVNDLMASGTHPLPPSAIMSGGDDIVS FT RVIDFESIWEKPSDLRNLATWRYFQSVQKQVNMSYDLIICDAEVTDIASINRITLLMSD FT FALSIDGPLYLVFKTYGTMLVNPDYKAIQHLSRAFPSVTGFITQVTSSFSSELYLRFSK FT RGKFFRDAEYLTSSTLREMSLVLFNCSSPKSEMQRARSLNYQDLVRGFPEEIISNPYNE FT MIITLIDSDVESFLVHKMVDDLELQRGTLSKVAIIIAIMIVFSNRVFNVSKPLTDPLFY FT PPSDPKILRHFNICCSTMMYLSTALGDVPSFARLHDLYNRPITYYFRKQVIRGNIYLSW FT SWSDDTPVFKRVACNSSLSLSSHWIRLIYKIVKTTRLVGSIEDLSGEVERHLHGYNRWI FT TLEDIRSRSSLLDYSCL" XX SQ Sequence 11798 BP; 3335 A; 2591 C; 2771 G; 3101 T; 0 other; atgtaacacc cctacaatgg atgccgacaa gattgtattc aaagtcaata atcaggtggt 60 ctctttaaag ccagagatta tcgtggatca atatgagtac aagtacccag ctatcaaaga 120 tttgaaaaag ccctgtataa ccctagggaa agcccccgac ttaaacaaag catacaagtc 180 aatcttatca ggcatgaatg cagccaaact tgatcctgat gatgtatgtt cctacttggc 240 agcagcaatg cagttctttg aggggacgtg tccagaggac tggaccagct atggaatctt 300 gatcgcacga aaaggaaaca agatcacccc ggattctctg gtggaaataa agcgcactga 360 tgtagaagga aattgggctc tgacaggagg cttggaactg acaagggacc ccactgtccc 420 cgagcatgcg tctttagttg gtcttctctt gagtctgtat aggttgagca aaatatcagg 480 acaaaacact ggtaactata aaacaaacat cgcagatagg atagagcaga ttttcgagac 540 agcccctttt gttaaaatcg tggaacacca tactctaatg acaactcaca aaatgtgtgc 600 caattggagt actataccga atttcagatt tttggccggg acctacgaca tgtttttctc 660 tcggattgag catctatatt cggcaatcag agtgggcacg gttgttactg cttatgaaga 720 ctgttcaggt ctggtatcgt ttactgggtt cataaagcag atcaatctca ctgcaaggga 780 agcaatacta tacttcttcc acaagaactt tgaggaagag ataagaagaa tgttcgagcc 840 agggcaggag acagctgttc ctcactccta tttcattcac ttccgttcat taggtttgag 900 tgggaagtct ccttattcat cgaatgccgt tggtcatgtg ttcaatctca ttcactttgt 960 tggatgctat atgggtcaag tcagatccct aaacgcaaca gtcattgctg catgtgctcc 1020 tcatgagatg tctgttctag ggggctatct aggagaggaa ttcttcggaa aaggaacatt 1080 cgaaagaagg ttcttcagag atgagaaaga acttcaagaa tacgaggcgg ctgaactgac 1140 aaagaccgac gtggcattgg cagatgatgg aactgtcaac tctgacgatg aggactactt 1200 ctccggtgaa accagaagtc cagaagccgt gtatactcga attatgatga atggaggtcg 1260 actaaagaga tcgcatataa ggagatatgt ctcagtcagt tcgaatcatc aagctcgtcc 1320 aaactcattt gcggagtttc taaacaagac atatgcgaac gactcatgag gagttgaata 1380 acagtgtgcc agaaacctgt cgattgtgga tatccatcat gaaaaaaact aacacccctc 1440 ctttcgaacc gtcccaaata tgagcaagat tttcgtcaat ccgagtgcta tcagagcagg 1500 tctggccgat cttgagatgg ctgaagagac tgttgatctg atcaatagaa acatagaaga 1560 caatcaggct catctccagg gggaacccat agaagtggac aatctccctg aggacatgcg 1620 gcgacttcac ctggatgagg gaaaatcgtc ccacctcggt gagatggcca aagcaggaga 1680 aggcaggtat cgagaggact ttcagatgga tgaaggagag gaccctagcc tcctgttcca 1740 gtcatacctg gacaatgttg gagtccaaat agtcagacaa atgaggtcag gagagagatt 1800 cctcaagata tggtcacaga ctgtagaaga gattatatcc tatgtcacgg tcaactttcc 1860 caaccctcca gggaggtcct cagaggacaa atctacccaa actgttggtc gagggcccaa 1920 aaaggagaca acatccaatc cttctcagag agaaagccaa cctttgaaag ccaggatggc 1980 ggctcaagct gcctctggcc ctccagccct tgaatggtct gctaccaatg aggaagatga 2040 tctatcagta gaggctgaga ttgctcacca aattgctgaa agcttttcca agaagtacaa 2100 gtttccctct cgatcctcag ggatattcct gtataatttt gagcagctga agatgaacct 2160 tgatgatata gttaaggagg caaaaaatgt gccaggcgtg acccgtttag ctcatgacgg 2220 atccaaactc cccctaagat gtgtgctggg atgggttgct ttagccaatt ccaagaaatt 2280 ccaattgtta gtagaggctg acaagctaag taaaatcatg caggatgatt tgaatcgcta 2340 tgcatcctgc taaacgaact tctaaactcg gttcctctag ataataaaat ctgagatgtc 2400 ctagagtcaa catgaaaaaa acaggcaaca ccactgataa aatgaacttt ctacgcaaga 2460 tagtgaaaaa ctgtagggat gaggacactc aaaaaccctc tcccgcgtca gcccctccgg 2520 atgacgatga cctgtggctt ccaccccctg aatacatccc gctgaaagaa ctcacaagca 2580 ggaagaacat gaggaacttt tgtatcaacg gggaggttaa agtgtgtagc ccgaatggtt 2640 actcgttcag gatcctgcgg cacattctga gatcattcga cgagatatac tctgggaatc 2700 ataggatgat tggattggtc aaagttgtca ttggactagc tttgtcagga gctccggtcc 2760 ctgagggcat gaactgggtg tacaaactga ggagaaccct tatcttccaa tgggctgatt 2820 ccaggggtcc tcttgaaggg gaggagttgg aatattcaca ggagatcact tgggatgatg 2880 atactgagtt cgtcggattg caaatcagag tgagtgcaag acaatgtcat atccagggca 2940 gaatctggtg tatcaacatg aactcaagag catgtcagct atggtctgac atgtctcttc 3000 agacacaaag gtccgaagag gacaaagact cctctctgct tctagaataa tcagattata 3060 tcctgcaagt ttatcacttg tatacctctg gaggagagaa catacgagct tgactccaac 3120 ccttgggagc aatagaacaa aaacatgtta tggtgccatt aaaccgctgc attttatcaa 3180 agtcaagtta attaccttta cattttgagc ctcttggatg tgaaaaaaac tattaacatc 3240 cctcaaaaga cttaaggaaa gatggttcct caggctcttt tgtttgtacc ccttctggtt 3300 ttttccttgt gtttcgggaa attccctatt tacacgatac cagacaaaat tggtccttgg 3360 agtcctattg acatacatca tctcagctgc ccaaacaatt tggttgtaga ggacgaagga 3420 tgcaccaacc tgtcagggtt ctcctacatg gaacttaaag ttggatacat ctcagccata 3480 aaagtgaacg ggtttacttg cacgggcgtt gtgacagagg cagaaaccta cactaacttt 3540 gttggttatg tcaccaccac gttcaaaagg aagcatttcc gtccaacccc agatgcatgt 3600 agagctgcgt acaactggaa gatggccggt gaccccagat atgaggagtc tctacataat 3660 ccgtaccctg actaccattg gcttcgaact gtaaaaacca ccaaggagtc tctcgttatc 3720 atatccccaa gtgtggcaga tttagaccca tatgacaaat ctcttcactc gagggtcttc 3780 cctggtggaa agtgctcagg aataacggtg tcttctacct actgctcaac taaccacgat 3840 tacaccattt ggctgcccga gaatccgaga ctagggacgt cttgtgacat ttttaccaat 3900 agtagaggga agagagcctc caaagggagt aagacctgtg gctttgtaga tgagagaggc 3960 ttgtataagt cgctaaaagg agcatgcaaa ctcaagttat gtggagttct tggacttaga 4020 cttatggatg gaacatgggt cgcgatgcaa acgtcagatg aggccaaatg gtgccctcct 4080 gatcagttgg tgaatctgca cgactttcgc tcggatgaaa ttgagcacct tgttgtagaa 4140 gagctggtca agaaaagaga ggagtgtctg gatgcactag aatccatcat gaccaccaaa 4200 tcagtgagtt tcagacgtct cagtcattta agaaagcttg tccctgggtt tggaaaagca 4260 tataccatat tcaacaagac cttgatggag gctgatgctc actacaagtc agtccgaaca 4320 tggaatgaga tcatcccctc aaaagggtgt ttaagagttg gagggaggtg tcatcctcat 4380 gtgaacgggg tgtttttcaa tggtataata ttagggcctg acggccatgt tctaatccca 4440 gagatgcaat catccctcct tcagcaacat atggagttgt tggaatcctc agtcattccc 4500 ctgatgcacc ccctggcaga cccgtccgca gttttcaagg acggtgatga ggctgaggat 4560 tttgtagaag ttcacctccc cgatgtgcac aaacaggtct caggggttga cctgggcatc 4620 ccaaactggg ggaagtatgt attactgagt gcaggggccc tgattgcctt gatgttgata 4680 attttcctaa tgacatgttg cagaagagtc aatcgaccag aacctacgca gcgcagtttc 4740 ggagggacaa ggaggaaggt gtcgatcact tcccaaggcg ggaaggtcat atcttcatgg 4800 gagtcatata agagtggggg tgagactaga ctgtgagggc tggccatcct ttcgacgctt 4860 caagtcctga agatcacctc tccttggggt tggagggaat ctctgggttc aatggtcctc 4920 cttgaactcc gtgcaacagg gtagattcaa gagtcatgag actttcatta atcatctcag 4980 ttgatcaaat taggtcatgt agattctcat aatacgggaa atcttctagc agtttcagtg 5040 accaacggtg ctttcatttt cccggaactg gtaccaaagg ttatggacgg gccgagaggt 5100 atttcggatg actccgtgcc tgggcacaga caggggtcac agtgagtcct atgatagcgg 5160 actcagcatg agtttattga gaaaggcaag ctgcctccca tgaaggacat aagcaatagt 5220 tcacaatcat cttgcatctc ggcaaagtgt gcataattat aaagggctgg gtcatctaag 5280 cttttcagtc gagaaaaaaa ctgtagacca aaagagcaac cggtaacact tctcatccta 5340 aagcctacat caagatgcta gatccagggg aggtctatga tgaccccatt gatccagtcg 5400 attcggaggc tgagcccaga ggagccccca ctgtccctaa catcttgaga aactctgact 5460 acaatctcaa ttcccctttg atagaagacc ctgcaagact aatgttggaa tggttgaaaa 5520 cagggaatag accttatcgg atgactctta cagacaatgg ctccaggtct tacaaagtgt 5580 tgaaagatta tctcaagaaa gtagatctgg gttctctgaa agtgggcggg actgctgcac 5640 agtcaatgat ttctctttgg ttatacagcg cccactctga atcaaacagg agccggaggt 5700 gtataacaga cttggctcat ttctactcca agtcatcccc catagagaag ctgttaaatt 5760 gtactctagg aaatagaggg ctgaaaatcc cccctaaggg ggtgttaagt tgccttgaga 5820 gggtcgatta tgataaggca tttgggaggt atcttgccaa cacgtattcc tcttatttgt 5880 ttttccatgt aatcacccta tatatgaatg ccctagactg ggacgaagaa aaaaccatct 5940 tagcattatg gaaagatctg acctcagtgg acatcgggaa ggacttggtc aagttcaaag 6000 atcaaatatg gggactgctg attgtgacaa aagactttgt ttactctcag agttctaact 6060 gcctttttga tagaaactat acacttatgc taaaagatct ttttttgtct cgcttcaact 6120 ccttaatgat cttgctctcc ccccccgagc ctcgatactc agacgacttg atatctcagc 6180 tgtgccagct atacatcgct ggggatcagg tcttgtccat gtgtggaaac tccggctatg 6240 aagtcattaa aatattggag ccatatgtcg tgaacagttt agtccagaga gcagaaaagt 6300 ttaggcctct tattcattcc ctgggagact ttcctgtatt tataaaagac aaggtgagtc 6360 agcttgaagg gacttttggt cccagtgcaa aaaggttttt tagagttctg gatcagttcg 6420 acaacataca tgatttagtt tttgtgtatg gctgttacag gcattggggg cacccctaca 6480 tagattaccg aaagggtcta tcgaaactat atgatcaagt tcacatcaaa aaagtgatag 6540 acaagtccta ccaggagtgt ttggcaagcg acctagccag gaggatcctt agatgggggt 6600 ttgataagta ctccaagtgg tatctggatt cgcgattcct tgcccgagac caccccttga 6660 ctccttatat caaaacccag acctggccac ccaaacatat agtagacttg gtgggggata 6720 cctggcacaa gctcccgatc atgcaaatct ttgagattcc tgaatcaatg gacccgtcag 6780 aaatactgga tgacaaatca cattcattca ccagaacaag actagcttct tggctgtcag 6840 agaaccgagg agggcctgtt cctagtgaga aagttattat cacggccttg tctaagccgc 6900 ctgtcaatcc ccgagagttt ttgaaatctg tagacctcgg aggattgcca gatgaggact 6960 taataatagg cctcaagcca aaggagcgag aattgaagat tgagggtaga ttctttgctc 7020 tgatgtcatg gaatctaaga ttgtattttg tcatcaccga aaagctcctg gctaactata 7080 tcttgccact ttttgacgca ctgaccatga cagacaacct gaacaaggtg tttaaaaagt 7140 tgatcgacag ggtcactggt caagggcttt tggactattc gagggttaca tatgcatttc 7200 atttggacta cgagaagtgg aacaatcatc aaagattaga gtcaacagag gatgtgttct 7260 ctgtcctgga tcaggtgttt ggattgaaga gagtgttttc tagaacacat gagttttttc 7320 agaagtcctg gatctattat tcagacagat cagacctcat cgggttatgg gaggatcaaa 7380 tatactgctt ggatatgtcc aacggcccaa cttgctggaa tggccaggac ggcgggctag 7440 agggcttacg gcagaaggga tggagtctag tcagcttatt gatgatagat agagaatccc 7500 aaaccaggaa cacgagaact aaaatactag ctcaaggaga caaccaggtt ctatgtccga 7560 catatatgtt gtcgccgggg ctgtctagag aggggctcct ctatgagtta gagagcatat 7620 caaggaatgc actttcaata tatcgagcca tcgaggaagg ggcatctaaa ctagggctga 7680 tcatcaagaa ggaggagacc atgtgtagtt atgactttct catttatggg aaaactccct 7740 tgtttcgagg taacatattg gtgcctgagt ccaaaagatg ggccagagtc tcttgcatct 7800 ctaatgacca gatagtcaac ctcgccaata taatgtcgac agtgtccacc aatgcactga 7860 cagtggcaca acactctcaa tctttgatca agcctatgag ggattttctg ctcatgtcag 7920 tgcaggcagt ctttcactac ctgttgttta gcccaatctt aaagggcaga gtttacaaaa 7980 ttttgagtgc tgaaggggag aactttctcc tagccatgtc gaggataatc tatctagacc 8040 cttctttggg aggggtgtct ggaatgtctc ttggaaggtt tcatatacgc caattctcag 8100 accctgtctc tgaagggttg tccttctgga gagagatctg gttaagctcc cacgagtcct 8160 ggattcatgc gttgtgtcaa gaggctggga acccagatct tggagagagg acactagaga 8220 gcttcactcg ccttctagaa gatcctacca ccttaaatat aaaaggaggt gcaagtccta 8280 ccattctact caaggatgcg atcagaaagg ctctgtatga cgaagtggac aaggtggaaa 8340 attcagagtt tcgagaggct atcctattgt ccaagaccca tagagataac ttcatactct 8400 tcttaaagtc tgttgagcct ctgtttcctc gatttctcag tgagctcttc agctcgtctt 8460 tcttggggat ccccgagtcg atcattggac tgatacaaaa ctcccggacg ataagaagac 8520 agtttagaaa gagcctctca agaactttag aagaatcgtt ctacaactca gagatccatg 8580 ggattaatcg gatgacccag acacctcaaa gggtcgggag ggtgtggcct tgctcttcag 8640 agagggcaga tctacttagg gagatctctt ggggaagaaa agtggtaggc acaacagttc 8700 ctcacccttc tgagatgttg gggttacttc ccaaatcctc catttcttgc acttgtggag 8760 caataggagg aggcaatcct agagtttctg tatcagtact cccgtccttc gaccagtcat 8820 tcttttcacg gggtccccta aagggatact tgggctcgtc aacctctatg tcaacccagc 8880 tattccatgc atgggaaaaa gtcactaatg ttcatgtggt gaagagggcc ctatcgttaa 8940 aagaatctat aaactggttc attactagaa actccaattt ggctcaaact ctaattagga 9000 acattatgtc tctgacaggc cccgatttcc ctctagagga ggcccctgtt ttcaaaagga 9060 cagggtcagc cttgcatagg ttcaagtctg ccagatacag tgaaggagga tattcttctg 9120 tttgcccgaa cctcctctcc catatctctg ttagtacaga cactatgtct gatttgactc 9180 aagacgggaa gaactacgac ttcatgtttc agccattgat gctttatgcg cagacatgga 9240 catcagagct ggtacagaga gacacaaggc tgagggattc tacgtttcat tggcacctcc 9300 ggtgcaacag gtgtgtaagg cccattgacg atataacact ggagactcct cagatcttcg 9360 agttcccgga tgtgtcaaaa agaatatcca gaatggtttc tggggctgtg cctcacttcc 9420 agaagcttcc tgatattcgt ctgagaccag gtgattttga gtctctaagt ggtagggaaa 9480 agtctcgcca tatagggtcg gctcagggac tcttatactc aattttagtg gcaattcacg 9540 actcaggata caatgatgga accatcttcc ctgtcaacat ttacggcaga gtctccccta 9600 gagattattt gagagggctc gcgagaggag tcttgatagg atcttcaatt tgcttcttga 9660 caagaatgac aaatatcaac attaatagac ctcttgagtt gatctcagga gtaatctcat 9720 atatcctcct gaggttagat aaccacccct ccctgtacat aatgctcaga gaaccgtctc 9780 ttagaggaga aatattttct atccctcaga aaatcccagc cgcttatccg accactatga 9840 aagaaggcaa cagatcgatc ttgtgttatc tccaacatgt gctacgctat gagcgagagg 9900 tgatcacggc gtccccagag aatgactggc tgtggatctt ctcagacttt agaagtgcta 9960 agatgacgta cctgaccctc attacttacc agtctcacct cctactccag agggttgaga 10020 aaaacttgtc taagagtatg agagctaacc tgcgacaaat gagctccttg atgaggcagg 10080 tgctgggtgg gcatggagaa gatactttag agtccgacga cgacattcaa agattactaa 10140 aagactctct gcgaagaaca aggtgggtgg atcaagaggt gcgccatgca gctagaacca 10200 tgactggaga ttatagcccc aacaagaaag tgtctcgtaa ggcaggatgt tcagaatggg 10260 tttgctctgc tcaacaggtt gcagtctcca catcggcaaa cccagcccct gtctcagagc 10320 ttgacacaag ggccctctct aagagatttc aaaacccttt gatctcaggc ttgagggtgg 10380 ttcagtgggc aaccggcgcc cattataagc ttaagcccat tctagacgat cttaatgttt 10440 tcccatccct ctgtcttgtg gttggggacg ggtcaggggg gatatcaagg gcagttctta 10500 acatgtttcc agatgctaag cttgtgttca acagcctctt agaggtgaat gatctaatgg 10560 cctccggaac acatccattg cctccttcag caatcatgag tggaggagat gacatagtct 10620 ccagagtgat agatttcgaa tcaatctggg aaaaaccgtc tgacttgaga aacttggcca 10680 cctggagata cttccagtca gtccaaaaac aggtcaacat gtcttatgac ctcattattt 10740 gtgatgcaga agttactgac attgcatcta ttaatcggat aaccctgtta atgtctgatt 10800 ttgcgttgtc tatagatgga ccactttatt tggtcttcaa aacctatggg actatgctag 10860 taaacccgga ctataaggct attcaacatc tgtcaagagc gttcccctca gtcacagggt 10920 ttataactca agtgacttcg tccttttcgt cagagctata tctccgattc tccaaacgag 10980 ggaagttttt tagagatgcc gagtatttga cctcttccac ccttcgggaa atgagccttg 11040 tgttattcaa ttgtagcagc cccaagagtg agatgcagag agctcgttcc ttaaactatc 11100 aagatcttgt aaggggtttc cctgaagaaa tcatatcaaa tccttacaat gagatgatca 11160 tcactctgat tgacagtgat gtagaatctt tcctagttca caagatggtg gatgatctcg 11220 agttacagag gggaaccttg tctaaggtgg ctatcattat agccatcatg atagttttct 11280 ccaacagagt cttcaacgtc tccaaacctt tgactgaccc cttgttctat ccaccgtctg 11340 atcccaaaat cctgaggcat ttcaacattt gttgcagtac tatgatgtat ctatctactg 11400 ctttaggcga cgtccctagc ttcgcaagac ttcacgacct gtataacaga cccataactt 11460 attacttcag aaagcaagtc attcgaggga atatttatct atcttggagt tggtccgacg 11520 ataccccagt gttcaaaagg gtagcctgta attccagctt aagtctatct tctcactgga 11580 tcaggttgat ttacaagata gtgaagacta ccagactcgt tggcagcatc gaggacttat 11640 ctggagaggt ggaaagacat ctccatgggt acaacaggtg gatcaccctc gaggatatca 11700 gatctagatc atctctacta gactacagct gcttgtaaac cgagtactcc cggaaggctg 11760 cacatgctaa aactcttgtg cgatgtatct tgaaaaaa 11798 // ID MK598346; SV 1; linear; viral cRNA; STD; VRL; 11798 BP. XX AC MK598346; XX DT 06-MAY-2020 (Rel. 144, Created) DT 06-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Rabies lyssavirus isolate 893, complete genome. XX KW . XX OS Rabies lyssavirus OC Viruses; Riboviria; Negarnaviricota; Haploviricotina; Monjiviricetes; OC Mononegavirales; Rhabdoviridae; Lyssavirus. XX RN [1] RP 1-11798 RA Forro B., Banyai K.; RT ; RL Submitted (05-MAR-2019) to the INSDC. RL New Pathogen Discovery, Institute for Veterinary Medical Research, Hungaria RL krt. 21., Budapest H-1143, Hungary XX DR MD5; 23b3cf08b82df1116664aad0f07e6f89. XX CC ##Assembly-Data-START## CC Assembly Method :: Geneious v. 9.1.8 CC Sequencing Technology :: IonTorrent CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..11798 FT /organism="Rabies lyssavirus" FT /host="red fox" FT /isolate="893" FT /mol_type="viral cRNA" FT /country="Hungary" FT /collection_date="2010" FT /db_xref="taxon:11292" FT gene 17..1369 FT /gene="N" FT CDS 17..1369 FT /codon_start=1 FT /gene="N" FT /product="nucleoprotein" FT /protein_id="QDZ26202.1" FT /translation="MDADKIVFKVNNQVVSLKPEIIVDQYEYKYPAIKDLKKPCITLGK FT APDLNKAYKSVLSGMNAAKLDPDDVCSYLAAAMQFFEGTCPEDWTSYGILIARKGDKIT FT PDSLVEIKRTGVEGNWALTGGMELTRDPTVSEHASLVGLLLSLYRLSKISGQNTGNYKT FT NIADRIEQIFETAPFVKIVEHHTLMTTHKMCANWSTIPNFRFLAGTYDMFFSRIEHLYS FT AIRVGTVVTAYEDCSGLVSFTGFIKQINLTAREAILYFFHKNFEEEIRRMFEPGQETAV FT PHSYFIHFRSLGLSGKSPYSSNAVGHVFNLIHFVGCYMGQVRSLNATVIAACAPHEMSV FT LGGYLGEEFFGKGTFERRFFRDEKELQEYEAAELTKTDVALADDGTVNSDDEDYFSGET FT RSPEAVYTRIMMNGGRLKKSHIRRYVSVSSNHQARPNSFAEFLNKTYSNDS" FT gene 1460..2353 FT /gene="P" FT CDS 1460..2353 FT /codon_start=1 FT /gene="P" FT /product="phosphoprotein" FT /protein_id="QDZ26203.1" FT /translation="MSKIFVNPSAIRAGLADLEMAEETVDLINKNIEDNQAHLQGEPIE FT VDNLPEDMRRLHLDDGKSSNLDEMAKAGEGKYREDFQMDEEEDPSLLFQSYLDNVGVQI FT VRQMRSGERFLKIWSQTVEEIISYVTVNFPNSPRRSSEDKSTQTPGREPKKETTSTPSQ FT REGQSSKARMAAQAASGPPALEWSATNEEDDLSVEAEIAHQIAESFSKKYKFPSRSSGI FT FLYNFEQLKMNLDDIVKEAKNVPGVTRLAHDGSKLPLRCVLGWVALANSKKFQLLVEAD FT KLSKIMQDDLNRYASC" FT gene 2442..3050 FT /gene="M" FT CDS 2442..3050 FT /codon_start=1 FT /gene="M" FT /product="matrix protein" FT /protein_id="QDZ26204.1" FT /translation="MNFLRKIVKNCRDEDTQKPSPVSAPPDDDDLWLPPPEYVPLKELT FT SKKNMKNFCINGEVKVCSPNGYSFRILRHILRSFDEIYSGNHRMIGLVKVVIGLALSGA FT PVPEGMNWVYKLRRTLIFQWADSRGPLEGEELEYSQEITWDDDTEFVGLQIRVSARQCH FT IQGRIWCINMNSRACQLWSDMSLQTQRSEEDKDSSLLLE" FT gene 3262..4836 FT /gene="G" FT CDS 3262..4836 FT /codon_start=1 FT /gene="G" FT /product="glycoprotein" FT /protein_id="QDZ26205.1" FT /translation="MVPQALLLVPLLGFSLCFGKFPIYTIPDKLGPWSPIDIHHLSCPN FT NLVVEDEGCTNLSGFSYMELKVGYISSIKVNGFTCTGVVTEAETYTNFVGYVTTTFRRK FT HFRPTPDACRAAYNWKMAGDPRYEESLHNPYPDYHWLRTVKTTKESLIIISPSVADLDP FT YDKSLHSRVFPSGKCSGITVSSTYCSTNHDYTIWMPENLRLGTSCDIFTNSRGKRASKG FT SKTCGFVDERGLYKSLKGACKLKLCGVLGLRLMDGTWVAMQTSDETKWCPPDQLVNLHD FT FRSDEIEHLVVEELVKKREECLDALESIMTTKSVSFRRLSHLRKLVPGFGKAYTIFNKT FT LMEADAHYKSVRTWNEVIPSKGCLRVGGRCHPHVNGVFFNGVILGPDGHVLIPEMQSSL FT LQQHIELLESSVIPLMHPLADPSTVFKDGDEAEDFVEIHLPDVHKQVSGVDLGLPNWGK FT YVLLSAGALIALMLIIFLLTCCRRVNRPEFTQRSLRGAGRKVSITSQSGKVISSWESYK FT SGGETRL" FT gene 5355..11738 FT /gene="L" FT CDS 5355..11738 FT /codon_start=1 FT /gene="L" FT /product="RNA dependent RNA polymerase" FT /protein_id="QDZ26206.1" FT /translation="MLDPGEVYDDPIDPVESESEPRGAPTVPNILRNSDYNLNSPLIED FT PARLMLEWLKTGNRPYRMTLTDNCSRSYKVLKDYFKKIDLGSLKVGGTAAQSMISLWLY FT GAHSESNRSRRCITDLAHFYSKSSPIEKLLNCTLGNRGLRIPPEGVLSCLERIDYDKAF FT GRYLANTYSSYLFFHVITLYMNALDWDEEKTILALWKDLTSVDIGKDLVKFKDQIWGLL FT IVTKDFVYSQSSNCLFDRNYTLMLKDLFLSRFNSLMILLSPPEPRYSDDLISQLCQLYI FT AGDQVLSMCGNSGYDVIKILEPYVVNSLVQRAEQFRPLIHSLGDFPVFIRDKVSQLEGT FT FGPSATRFFRVLDQFNNIHDLVFVYGCYRHWGHPYIDYRKGLSKLYDQVHIKKVIDKSY FT QECLASDLARRILRWGFDKYSKWYLDSRLLARDHPLTPYIKTQTWPPKHIVDLVGDTWH FT KLPITQIFEIPESMDPSEILDDKSHSFTRTRLASWLSENRGGPVPSEKVIITALSKPPV FT NPREFLKSIDLGGLPDEDLIIGLKPKERELKIEGRFFALMSWNLRLYFVITEKLLANYI FT LPLFDALTMTDNLNKVFKKLIDRVTGQGLLDYSRVTYAFHLDYEKWNNHQRLESTEDVF FT SVLDQVFGLKRVFSRTHEFFQKSWIYYSDRSDLIGLWEDQIYCLDMSNGPTCWNGQDGG FT LEGLRQKGWSLVSLLMIDRESQTRNTRTKILAQGDNQVLCPTYMLSPGLSREGLLYELE FT SISRNALSIYRAIEEGASKLGLIIKKEETMCSYDFLIYGKTPLFRGNILVPESKRWARV FT SCISNDQIVNLANIMSTVSTNALTVAQHSQSLIKPMRDFLLMSVQAVFHYLLFSPILKG FT RVYKILSAEGESFLLAMSRIIYLDPSLGGVSGMSLGRFHIRQFSDPVSEGLSFWREIWL FT SSHESWIHALCQEAGNPDLGERTLESFTRLLEDPTTLNIKGGASPTILLKDAIRKALYD FT EVDKVENSEFREAILLSKTHRDNFILFLKSVEPLFPRFLSELFSSSFLGIPESIIGLIQ FT NSRTIRRQFRKSLSRTLEESFYNSEIHGINRMTQTPQRVGRVWPCSSERADLLREISWG FT RKVVGTTVPHPSEMLGLLPKSSISCTCRATGGGNPRVSVSVLPSFDQSFFSRGPLKGYL FT GSSTSMSTQLFHAWEKVTNVHVVKRALSLKESINWFITRNSNLAQTLVRNIMSLTGPDF FT PLEEAPVFKRTGSALHRFKSARYSEGGYSSVCPNLLSHISVSTDTMSDLTQDGKNYDFM FT FQPLMLYAQTWTSELVQRDTRLKDSTFHWHLRCNRCVRPIDDITLETSQIFDFPDVSKR FT ISRMVSGAVPHFQRLPDIRLRPGDFESLSGREKSRHIGSAQGLLYSILVAIHDSGYNDG FT TIFPVNIYGKVSPRDYLRGLARGVLIGSSICFLTRMTNININRPLELISGVISYILLRL FT DNHPSLYIMLREPSLRGEIFSIPQKIPAAYPTTMKEGNRSILCYLQHVLRYEREVITAS FT PENDWLWIFSDFRSAKMTYLTLITYQSHLLLQRVERNLSKSMRANLRQMSSLMRQVLGG FT HGEDTLESDDDIQRLLKDSLRRTRWVDQEVRHAARTMTGDYSPNKKVSRKAGCSEWVCS FT AQQVAVSTSANPAPVSELDIRALSKRFQNPLISGLRVVQWATGAHYKLKPILDDLNVFP FT SLCLVVGDGSGGISRAVLNMFPDAKLVFNSLLEVNDLMASGTHPLPPSAIMSGGDDIVS FT RVIDFDSIWEKPSDLRNLATWRYFQSVQKQVNMYYDLIICDAEVTDITSINRITLLMSD FT FALSIDGPLYLVFKTYGTMLVNPDYKAIQHLSRAFPSVTGFITQVTSSFSSELYLRFSK FT RGKFFRDAEYLTSSTLREMSLVLFNCSSPKSEMQRARSLNYQDLVRGFPEEIISNPYNE FT MIITLIDSDVESFLVHKMVDDLELQRGTLSKVAIIIAIMIVFSNRVFNVSKPLTDPLFY FT PPSDPKILRHFNICCSTMMYLSTALGDVPNFARLHDLYNRPITYYFRKQVIRGNIYLSW FT SWSDDTSVFKRVACNSSLSLSSHWIRLIYKIVKTTRLIGSIEDLSGEVERHLRGYNRWI FT TLEDIRSRSSLLDYSCL" XX SQ Sequence 11798 BP; 3348 A; 2564 C; 2743 G; 3143 T; 0 other; atgtaacacc cctacaatgg atgccgacaa gattgtattc aaagtcaata atcaggtggt 60 ctctttgaag cctgagatta tagtggatca atatgagtac aagtaccctg ctatcaaaga 120 tttgaaaaag ccctgtataa ccctagggaa agcccccgac ttaaacaaag catacaagtc 180 agttttatca ggcatgaatg cagccaagct tgatcctgat gatgtatgtt cctacttggc 240 agcagcaatg cagttctttg aggggacgtg tccagaggac tggaccagct atggaatctt 300 gattgcgcga aaaggggaca agatcacccc agactctctg gtagaaataa agcgtacggg 360 tgtagaagga aattgggctc tgacaggagg catggaactg acaagggacc ccactgtctc 420 tgaacatgcg tctttagtcg gtcttctctt gagtctgtat aggttgagca aaatatcagg 480 acaaaacact ggtaactata aaacaaacat cgcagacagg atagagcaga tttttgagac 540 agctcctttt gtaaaaattg tggaacacca tactttaatg acaactcaca aaatgtgtgc 600 taattggagt actataccga atttcagatt tttagccggg acctatgaca tgtttttctc 660 tcggattgag catctatatt cggcaatcag agtgggtacg gttgtcactg cttatgaaga 720 ctgttcaggt ctggtatcgt ttactgggtt cataaagcag atcaatctca ccgcaagaga 780 agcaatccta tacttcttcc acaagaactt tgaggaagag ataagaagaa tgttcgagcc 840 agggcaggag acagctgttc ctcactccta cttcattcac ttccgttcac taggcttgag 900 cgggaagtct ccttattcat caaatgccgt tggtcatgtg ttcaatctca ttcactttgt 960 tggatgctat atgggtcaag tcaggtctct aaatgcaaca gttattgccg catgtgctcc 1020 tcatgagatg tctgttctag ggggctatct gggagaggaa ttcttcggga aaggaacatt 1080 cgaaagaaga ttctttagag atgagaaaga acttcaagaa tacgaggcgg ctgaactgac 1140 aaagactgat gtggcattgg ccgatgatgg aactgtcaac tctgatgatg aagactactt 1200 ctccggtgaa accagaagtc cagaagctgt ttatactcga atcatgatga atggaggtcg 1260 actaaagaaa tcgcatatac gaaggtatgt ctcagtcagt tcaaatcatc aagctcgtcc 1320 aaactcattc gctgagtttc tgaacaagac atattcgaac gactcataag aagttgaata 1380 acagtttgtc agaaatctat cgattgtgta tatccatcat gaaaaaaact aacacccctc 1440 ctttcgaacc atcccaaata tgagcaagat tttcgtcaat ccgagtgcta tcagagccgg 1500 tttggccgat cttgagatgg ccgaggagac tgttgatctg atcaataaaa acatagaaga 1560 caatcaggct catctccagg gggaacccat agaagtggac aatctccctg aggacatgcg 1620 gcgacttcac ctggatgatg gaaagtcgtc caacctcgat gagatggcca aggcggggga 1680 aggcaagtat cgagaggact ttcagatgga tgaagaagag gatcctagcc tcctgttcca 1740 atcttacctg gacaatgttg gagtccaaat agtcagacaa atgaggtcag gagagagatt 1800 cctcaagata tggtcacaga ccgtagaaga gattatatcc tatgtcacgg tcaactttcc 1860 caactctcca agaaggtcct cagaggacaa gtcaacccaa actcctggtc gagagcccaa 1920 gaaggagaca acatccactc cttctcagag agaaggccaa tcttcgaaag ccaggatggc 1980 ggctcaagct gcctctggcc ctccggccct tgaatggtct gctaccaatg aggaggatga 2040 tctttcagta gaggctgaaa tcgctcacca aattgctgag agtttctcca agaaatacaa 2100 gtttccctct cggtcctcag ggatattctt atataatttt gagcagttga agatgaacct 2160 cgatgatata gttaaggaag caaaaaatgt gccaggcgtg acccgtttag ctcatgacgg 2220 atccaaactc cccctgagat gtgtactggg atgggtcgct ttggccaatt ccaagaaatt 2280 ccaattgtta gtagaggccg acaagctaag taaaatcatg caggatgatt tgaatcgtta 2340 tgcatcctgc taactgaact tttaaattcg gtccctctag ataataagat ctgagatgtt 2400 ttagagtcga catgaaaaaa acaggcaaca ccactgataa aatgaacttt ctacgcaaga 2460 tagtgaaaaa ctgtagggat gaggacactc aaaaaccctc tcccgtgtca gcccctccgg 2520 atgacgatga cctgtggctt ccaccccctg aatacgtccc gctgaaagag ctcacaagca 2580 agaaaaacat gaaaaacttc tgtatcaacg gggaggttaa agtgtgtagc ccaaatggct 2640 actcgttcag gatcctgcgg cacattctga gatcattcga cgagatatac tctgggaatc 2700 ataggatgat tggattggtc aaagttgtta ttggactggc tctgtcagga gctccagtcc 2760 ctgagggcat gaactgggta tacaaactga ggagaactct tatcttccag tgggccgatt 2820 ccaggggtcc tcttgaaggg gaggagttgg aatactcgca ggagatcact tgggatgatg 2880 atactgagtt cgtcggattg caaataagag tgagtgcaag acaatgtcat atccaaggca 2940 gaatctggtg tatcaacatg aactcaagag catgtcagct atggtctgat atgtctcttc 3000 agacacaaag gtctgaagag gacaaagact cctctctgct tttagagtaa tcagattata 3060 tcccgcaagt ttatcacttg tatacctctg gaggagagaa catacgagct taactccaac 3120 ccttgggagc aatagaacaa aaacatgtta tggtgccatt aaaccgctgc attttatcaa 3180 agtcaagtta attaccttta cattttgagc ctcttggatg tgaaaaaaac tattaacatc 3240 cctcaaaaaa cttaaggaaa gatggttcct caggcgctct tgttagtacc ccttctgggt 3300 ttttcgttgt gtttcgggaa gttccctatt tacacgatac cagacaaact tggtccttgg 3360 agcccgattg atatacatca tctcagctgc ccaaacaatt tggttgtgga ggacgaagga 3420 tgcaccaacc tgtcagggtt ctcctacatg gagctcaaag ttggatacat ctcgtccata 3480 aaagtgaacg ggtttacttg cacgggcgtt gtgacagagg cagaaaccta cactaacttt 3540 gttggttacg tcaccaccac gttcagaaga aagcatttcc gtccaacacc agatgcatgt 3600 agagccgcgt acaactggaa gatggcaggt gaccctcgat atgaggagtc tctacacaac 3660 ccgtaccctg actaccattg gcttcgaact gtgaaaacca ccaaggagtc tctcattatc 3720 atatccccaa gtgtggcaga tttggaccca tatgacaaat cccttcactc gagggtcttc 3780 cctagtggaa agtgctcagg aataacggta tcttctacct actgctcaac caaccacgat 3840 tacaccattt ggatgcccga aaatctgaga ctaggaacgt cttgtgacat ttttaccaat 3900 agtagaggga agagggcgtc caaggggagt aagacttgcg gctttgtaga tgagagaggc 3960 ctgtataagt cactaaaagg agcatgcaaa ctcaagttat gtggagttct tggacttcga 4020 cttatggatg gaacatgggt tgcgatgcaa acatcagatg agaccaaatg gtgcccccct 4080 gatcagttgg tgaatctgca cgactttcgc tcggacgaaa ttgagcatct tgttgtagag 4140 gagttagtca agaaaagaga ggagtgtctg gatgcactag agtctatcat gaccaccaag 4200 tcagtgagtt ttagacgtct cagtcattta agaaagcttg ttcctgggtt tggaaaagca 4260 tataccatat tcaataagac cttgatggag gctgatgctc attacaagtc ggtccggact 4320 tggaatgagg tcatcccctc aaaagggtgt ttaagagttg gggggaggtg tcatcctcat 4380 gtgaacgggg tgttttttaa tggtgtaata ttagggcctg acggccatgt tctaatccca 4440 gagatgcaat catccctcct ccagcaacat atagagttgt tggaatcttc agttattccc 4500 ctgatgcacc ccctggcaga cccatccaca gttttcaaag acggtgatga agctgaggat 4560 tttgtcgaaa ttcatcttcc cgatgtgcat aaacaggtct ctggggtcga cctgggcctc 4620 ccaaactggg ggaagtatgt attactgagt gcaggggccc tgattgcctt gatgttgata 4680 attttcctgt taacatgttg cagaagagtc aatcgaccag aatttacgca gcgcagtctc 4740 agaggggcag ggaggaaggt gtcgatcact tcccaaagcg ggaaggttat atcttcatgg 4800 gagtcgtata agagtggggg tgagactaga ctgtgaaggc tggtcattct ttcgatgctt 4860 caagtcctga aggtcacctc cccttggagt tgggaggaat ctctggattt aatagtcctc 4920 cttgaactcc atgcaacagg gtagattcaa aagtcatgag actttcatta atcatctcag 4980 ttgatcaaac taggtcatgt agattctcat aatacgggaa atcttctagc agtttcagtg 5040 accaacggtg ctttcattct cccggagctg gtactaaagg ttgtagacgg tccgagaggt 5100 atggcagatg accctgtgcc tgggcacaga cagaggtcat agtgagtccc atgatagcag 5160 attcagcatg agtttatcga gaaaggcagt ctgcctccca tgaaggacac aagcaatagc 5220 tcactatcat cttgcatctt agcaaagtgt gcataattat aaagggctgg gtcatctaag 5280 cttttcagtc tagaaaaaaa ctgtagatca aaagagcaac tggcaacact tctcatcctg 5340 aaacctacat caagatgcta gatccaggag aggtctatga tgaccccatt gatccagtcg 5400 agtcagaatc tgaacccaga ggagccccca ctgtccctaa tatcttgaga aactctgact 5460 acaatctcaa ttcccctttg atagaagacc ctgcgagact aatgttagaa tggttgaaaa 5520 cagggaatag accttatcgg atgactctga cagacaattg ctccaggtct tacaaagtgt 5580 taaaggatta tttcaagaaa atagatctgg gttctctgaa agtgggcgga actgccgcac 5640 agtcgatgat ttctctttgg ttatatggtg cccactctga atcaaacaga agccggagat 5700 gtataacaga cttggcccat ttctattcca agtcatcccc catagagaag ctgttaaatt 5760 gtacactggg aaatagaggg ctgagaattc ctcctgaggg ggtgttaagt tgccttgaga 5820 ggatcgatta tgataaggca tttgggaggt atcttgccaa cacgtattcc tcttatttgt 5880 ttttccatgt aatcacccta tacatgaatg ccctggactg ggacgaagaa aaaaccatct 5940 tagcattatg gaaagattta acctcagtgg acatcgggaa agacttggtc aagttcaaag 6000 atcaaatatg gggactgctg attgtgacaa aggactttgt ttactctcag agttccaatt 6060 gtctttttga cagaaattat acacttatgc taaaagatct ttttttgtct cgcttcaact 6120 ccttaatgat cttgctctct ccccccgaac cgcgatactc agacgacttg atatctcagt 6180 tgtgccagct gtacatcgct ggggatcagg tcttgtccat gtgtgggaac tccggctatg 6240 atgtcattaa aatattggag ccatatgtcg taaacagttt agtccagaga gcagaacagt 6300 ttaggcctct tattcattcc ttgggagatt ttcctgtatt tataagagac aaggtgagtc 6360 agcttgaagg gactttcggt cccagtgcga caaggttttt tagggttcta gatcagttca 6420 acaacataca tgatttggtt tttgtgtatg gctgttacag gcattggggg cacccctata 6480 tagattatcg gaagggtcta tcgaaactat atgatcaagt tcacatcaag aaagtgatag 6540 ataagtccta ccaagagtgt ttagcaagcg acctagccag gagaatcctc agatggggat 6600 ttgataagta ctccaagtgg tatctagatt cgcgactcct tgccagagat caccccttga 6660 ctccttatat caaaacccag acatggccac ccaaacatat agtagatttg gtgggggata 6720 cttggcacaa gctcccgatc acgcaaatct ttgagattcc tgaatcaatg gacccgtcag 6780 aaatactgga tgacaaatca cactctttca ccagaacaag actagcgtct tggctgtcag 6840 agaaccgagg ggggcctgtt cctagtgaga aagttattat cacggccttg tctaagccgc 6900 ctgtcaatcc ccgagagttt ttgaaatcta tagatctcgg aggattgcca gatgaggact 6960 taataattgg cctcaagcca aaggaacgag aattgaagat tgaaggtaga ttctttgctc 7020 taatgtcatg gaatctgaga ttgtattttg tcatcaccga aaagctcctg gctaactaca 7080 tcttgccact ttttgacgca ttgaccatga cagacaacct gaacaaggtg tttaaaaagt 7140 tgatcgacag ggtcaccggg caagggctgt tggactattc gagggttaca tatgcatttc 7200 acctggacta tgaaaagtgg aacaatcatc aaagattgga gtcaacagag gatgtgttct 7260 ctgtcctgga ccaggtgttt ggattgaaga gagtgttttc tagaacacat gagttttttc 7320 agaagtcctg gatctattac tcagacagat cagacctcat tgggttatgg gaggatcaaa 7380 tatactgctt gg