TMpred - Prediction of Transmembrane Regions and Orientation

The TMpred program makes a prediction of membrane-spanning regions and their orientation. The algorithm is based on the statistical analysis of TMbase, a database of naturally occuring transmembrane proteins. The prediction is made using a combination of several weight-matrices for scoring.
K. Hofmann and W. Stoffel
TMbase - A database of membrane spanning proteins segments
Biol. Chem. Hoppe-Seyler 347,166 (1993)

For further information see the TMbase and TMpredict documentation.

Usage: Paste your sequence in one of the supported formats into the sequence field below and press the "Run TMpred" button.
Make sure that the format button (next to the sequence field) shows the correct format

Choose the minimal and maximal length of the hydrophic part of the transmembrane helix

minimum maximum output format

Your query's title (optional):

Query sequence (see above for valid formats):

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